TCONS_00016575 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016575
Unique NameTCONS_00016575
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1358

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016575 ID=TCONS_00016575|Name=TCONS_00016575|organism=Clytia hemisphaerica|type=transcript|length=1358bp
AAagatgaaaatcaaaacattaaaaaatctgtctgattttcaatcaaaaa
gttGAATTATTGTCTTGTTTATTTTTAGCTTAACATAAAAGTTTCAAATG
TTAATGGGTATAAAAGTTAACAAAAACCTCTGTCATATGTATAAACCTAG
CTTTTAAAAAGGCAAGGCAGTGACACGAACAAGAGACAAGTGAGGAGAAA
GTTCCAACACCGCGCCGCGCCGCACACCATCACATCAGAGCAAAATGACA
AAGAACATACCCAGATGTTTGGCATTTTTGATGCTTGTTTGNGCCGCGCC
GCACACCATCACATCAGAGCAAAATGACAAAGAACATACCCAAATGTTTG
GCATTTTTGATGCTTGTTTGTTTATGGAATGAAACATCTTCAAGTATTGA
GAAATCATTTGAATATAACATAGCTATTGTCCCTAATGAATTCATCGTGA
AGTTTTCTGGTTATCACAATACTGATCAGTACTATCCACTCTTGACGAAT
CTTCTTGCAAAGTTTTCACAGAAGTCTTGGAAAGTTGTAGAAAGATCAAA
CNTATCCACTCTTGACGAATCTTCTTGCAAAGTTTTCACAGAAGTCTTGG
AAAGTTGTAGAAAGATCAAACCCTGGTTCTCAATACCCAAgtgatttttc
tcttttaaagATCTGGAACGAAACAGATGATATTTTACAAGAGTTGCGAT
CTTCACAAGTAGTTAAAAGTGTCGCACAACAAAAGAAGGTCACCAGAAGG
CTAAAGAATGTCAATCCTTATCATGCTGATCACCCTATTGAAgatgaaga
taaaaaagagCCAGGAAATTTAAAGCGCTCCAAATTGGACTTGaaTTCTG
ATCAAATTCTGAATCACAAGTCAAGGAAAATTTTAAGGACCATCCCAAGA
CAAATAACTCATGCACTGCAAGCCAACTCACTATGGCTTCTGGGTCATAA
AGGAAAAGGTGTGAAGGTTGCTATATTTGATACTGGTCTTCCCAAATCCC
ACCCACACTTCAAGACCGTGAAAGATAGAACTGATTGGACTGATGAGAAA
AAGTTCAATGATGATGTTGGTCATGGTACATTTGTTTCTGGTGTGATCGC
TAGTGATAGAGATTGTAAAGGATTTGCACCTGAAGCTGACCTGTTCATCT
TTAGAGTATTCACCAGTAAACAGGTGTCATATACGTCATGGTTTTTAGAT
GCCTTTAATTATGCAATTTTGAAGAAGATTAACGTCCTTAATCTTAGTAT
AGGAGGTCCAGATTTCATGGATAAACCTTTTGTTGAAAAGGTCTGGGAGT
TGACCGCGAATAATGTGATCATGGTTTCTGCCATTGGTAATGATGGCCCA
CTTTATGG
Run BLAST on NCBI

transcript from alignment at sc0000243:193548..205018+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016575 ID=TCONS_00016575|Name=TCONS_00016575|organism=Clytia hemisphaerica|type=transcript|length=11471bp|location=Sequence derived from alignment at sc0000243:193548..205018+ (Clytia hemisphaerica)
AAagatgaaaatcaaaacattaaaaaatctgtctgattttcaatcaaaaa
gttGAATTATTGTCTTGTTTATTTTTAGCTTAACATAAAAGTTTCAAATG
TTAATGGGTATAAAAGTTAACAAAAACCTCTGTCATATGTATAAACCTAG
CTTTTAAAAAGGCAAGGCAGTGACACGAACAAGAGACAAGTGAGGAGAAA
GTTCCAACACCGCGCCGCGCCGCACACCATCACATCAGAGCAAAATGACA
AAGAACATACCCAGATGTTTGGCATTTTTGATGCTTGTTTGNGCCGCGCC
GCACACCATCACATCAGAGCAAAATGACAAAGAACATACCCAAATGTTTG
GCATTTTTGATGCTTGTTTGTTTATGGAATGAAACATCTTCAAGTATTGA
GAAATCATTTGAATATAACATAGCTATTGTCCCTAATGGTAAGTTTTATT
AggtaattgtttttattatttagtCGTGTTCTCTCTACTCTTGTCCTACT
TATATCTTAGTAGAAAAGACAAAACATCATTATTACATTGTTTTAACATT
CAATTCAAGTACATACCAGGAAGTcggataacttgcatcagtggagggaa
acttgcatagccctcaaatgaatgacctggctggtcattaaaataccaag
ttaaatcaaaacaaacctgatttacaaaaaaattatggaTGGTAAAATGT
ATGAATATCTCCTACTATAATCATTAAAGTGATGTCATGCATAATCATGT
TTAATATCATTATCAAATTTGAGGTTACACTTCCAGCACAGAGCAGCCAt
cgagaaacgtctgaaatTGCGACGCGCCGATTGCcagtttttggaaattt
tcgcTTGTATATATTAAGTATCGCAATTCACTAAattgggcattttcaaa
aaagtgggaataaagaaagaaaatgactgattttgcttgaaacacacgTT
ATGGGTTAAACAtaccaaaaattgtaacaaaactAGTGACAAAAATAATA
ACTAAATAACTAAGTGTTagcaaatttcatttttgaaaattttgcaattt
tcagcctatatttaaatttttttgcgtgtatttaatttttgccattttgt
attttggaaaatttaaacaggatcaaatttcacaaaatttgaccttcgcg
aaattaagtaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNcaaacaattaattcctttcaaaatttttaaatatggc
agcttataataggtacaaaaagtcttttgaaatagctctattataatgaa
gctctatttcttactcgtCGTGCATTAAcatggtaatttatatctttgtt
tatctttgcaaTCATACATGgtcaatctaagtatcaatcagattcatgct
ccctggtcaTTTAAAATGTGGTTactatgcattcattttcggtatttcta
ttctgctctggtctgtaaaatatttaggtaccccacaacctagcccaatt
ggctaccccaattggctaccctgctttttagaccaaccccaaatttcatt
tttgaaaattttgcaattttcagcctatatatttttaaatttttttgcgt
gtatttaatttttgccattttgtattttggaaaatttaaacaggatcaaa
tttcacaaaatttgaccttcgcgaaattaagtacctgTGAAATTTTGTTA
CCATTAAGGTAACTCGCCAAAATTACTTGCACGGCAAATATGAGATTCTa
taatggtagagtagagctgcgagtaGAGCTACGcaggcttcggcataaga
aaaaagaaggcgtgtgatcatcgcacgcctacatagtaatttttagtaat
ttaggcgtgCGAATCATGGCACGCCTCATTTTCTTNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacttttttataagaa
attttgtaTACATATAGCAGTTTGAAAGAGTAAAGGAAAGTTTATCTTTC
ATCTATTTGGTTCTTATGATTAAAGTAGAAAATGCTATTTGATCTTCTTT
CAACaagcagaaaaaatatttctatAATAAATTTTTGCATGTGCGATTGA
TCGCACGCCTCGCTAGGTTTTCATGATTTATGGCGTGTGATAAATTGCAC
GCCTAAAAGGCTTTTAGGCGTGTGCGGAGGCGTGCGCGTGCGATCGCACG
CCTAATATGCCGAAGCCTGCtacgtagttcatttgttttgaaatttagct
gctttgattggtcagtaaACTGCTCAGTTAAAATTTATGCCTGTGTGCAA
TTGTACGCTTACAAGCTTACAGCCCCACCCCAGTTCACAGTTGAGATTGC
TTGAGCAAAAAAGGGCTCAGTTTCTACAAAACTGGGCGAAAGTTTTTAca
atgtgattgttttctgcaaTAAATATGTATGATAGACTAGTTCATTCAAA
TAGCGATAAAAGCGTGTAATTGCACccttaaaaaatttggatttcacaAT
ATGGCCCCTTGTTTTTTCAAATGTAGTAGCTCTGTTTTTGTGACGAGAAA
GATAATAACACATTTCCGCAAACTTCTATACATAGGTAAGGTTGGATATT
GTCtcctttatattttgaaattgaattctTGCGTAAAACAATATAATGTG
TGATCAATAATTGAAAGGTGAAGCAAATGATTTTTGCACGCATCTTCTAA
TTTCTGAGATATTTGCACAATATCCGGGCAAAATAAAAGGCCCATGAAAA
TTAACAGGATCGAGGTAGGTAATCAAGTCCATCCAAAATCTTGACTCATC
ATGACTTTTCACTTGTGCTACTGACAATTTTCTCCTTGTTACTTGTGATT
AATCGCCAATCGTACTCTAAATTTTGTTGTTACTAGAACAAGAACATTAT
CCATGATAAACTATTTCTAATTCTATTTATTCAATTTGAATTTAAGTATT
TATACCTGTGATGCAATTAAATTTCTAGAATTCATCGTGAAGTTTTCTGG
TTATCACAATACTGATCAGTACTATCCACTCTTGACGAATCTTCTTGCAA
AGTTTTCACAGAAGTCTTGGAAAGTTGTAGAAAGATCAAACNTATCCACT
CTTGACGAATCTTCTTGCAAAGTTTTCACAGAAGTCTTGGAAAGTTGTAG
AAAGATCAAACCCTGGTTCTCAATACCCAAgtgatttttctcttttaaag
gTTTGTGATTTATATATTTCAGATGTCATTTAATTAACAAATTATTTTAC
AACAATAATATGCTTATTGAGGGGCATGCTCTGTCAAAAAGGGTCTCAGA
TTAATTATAGTAGTCTTAAAAGACTGGTTCAAGTTTGTATGTATTTTGGT
TCCTAGATCTGGAACGAAACAGATGATATTTTACAAGAGTTGCGATCTTC
ACAAGTAGTTAAAAGTGTCGCACAACAAAAGAAGGTCACCAGAAGGCTAA
AGAATGTCAATCCTTATCATGCTGATCACCCTATTGAAgatgaagataaa
aaagagCCAGGgtatttgatttttatttttttagataattcaatttcttt
tgtttttaaaatgactACCAGCCAGGTCAAGTTAGTATCTAAATTTCACT
CCTCTAATCCTTTTGATGTTCATTCATTCATAATGCAGGCAAATTATTAC
TTTTGCTTTGTTTAATGAGTgtagataaattttaaaatttaatagCATTT
AGACTGATTTAACACAAACGAGAGGGTACTGTATGAGAATTTTTCAAGTT
GAATGGCAAGTATTTTTAGAAGTAACAATTTGTAACAcgtaatttcattt
cattttctctttcagAAATTTAAAGCGCTCCAAATTGGACTTGGTAAGTG
GAcataaaaagtttacaaaaagtTTCATCTTAGCTCTATTGTACATGGAT
TTGGTTAAAGAATTAGACACGGTAGAAATAGCATGTGTCAAGAAAGCCTG
TTTCGTTTCgtttaaattatgtttttatgtttttagaaTTCTGATCAAAT
TCTGAATCACAAGTCAAGGAAAATTTTAAGGACCATCCCAAGACAAGTAA
GAAAGACTAAtagaattttgattttaacatcTAAAATAGCTTAGCTCATA
AAAGCAACCCTTTAGGGTTCATATCATCTTTCGTAGGATACATCGACATG
TTATTGGTTGGAAGGTAGCTAGACTTTAGAGACtatattttgatgatttt
caaaCTTAGTCGAATTCAACAAATTATTATTATCGGATGGAGTATAAGAT
TCTTAGCAAAAACTTATACTGCAACAAGGTATTTCATTCAAACACAGAAA
GATAATGGCCATTTAAAATTCTAAAtcctgtatttttttataatatgtCT
CAGCACAAGAGTTTTTAcacttttattttctttgatgcTGCTTTATCATT
CTGTTCCTGTTGTAGAACACTCTTTTTATATGGCGAACCTTATTAATTGT
CGCTACCCTTTTTTAGATAACTCATGCACTGCAAGCCAACTCACTATGGC
TTCTGGGTCATAAAGGTATTTTTATTGATCTACaatattttattaattta
tgCACTCATAGATTACAATCATTGTTTTATGCATATGATTTCTCATTGTA
GAGTGATTTTGAACACAAAATTAtacaatactaataataatatcttttgg
tttttgtaaattttgaaatattgttaTTCGATGAGCAGggggggggcaag
cagttaATACACAACACTATGTGTATTAActgctttttgaaatttttcaa
aaggaccACTACCCCTTGACACTTAGTACACTGTGTATTAACTGTTTTTG
TCCCAATAAATATATACACCACCCCCAAAGTGAGTCTGCAGCAGCCAACA
AACCATCCCATGTAGGTCCACTGTGTATTTTCCTGTTAATTTGATGCAAT
GCAAGGGGTTTTAACTATTTTGAGACTACTTATGTCACAGATTTCTGTCA
TTAGAAAATTCAAATTAAGTTTTTGTAAATTGGGGTGCAAATCCCTTGCT
AGACCTAAACCATGCAACagttaaaaattttagattttgagtAAGCAGAA
AAAGATTATTAGGTTTGTTTTCGCATGGTTGCTTAGTTTTAAATTTATAG
GAAGTGCCAAATAATAACAAACGTCTTCGAACGTCTGAATTAAATCGAAC
ATTTGATTGAAAGGaatcgaatgtttacaaaatgtgATGCTGAGATAAGA
CATAAAAACTTGGGTTTGGTCTGGCTTGATGCAGCTTGATGTTGAGTTCT
AGAGAAAGAGCTAGCAAATTTTAGTTTTACAGTTAGTTGCAGTTAATACA
CTTTTTGAGTTCTAAAAATTGTCTTAACACCACCCCCTTTAACTTTAATt
tgcaaatttcagaaaaggacccaccacggtactaagtgTCATAGGTCTCA
TGTATtaactgcttgccccccccTGCGATGAGTGTACTTTTTGTACCTTT
ATAATTATATACCTGAACTAATTTTTTAGGAAAAGGTGTGAAGGTTGCTA
TATTTGATACTGGTCTTCCCAAATCCCACCCACACTTCAAGACCGTGAAA
GATAGAACTGATTGGACTGATGAGAAAAAGTTCAATGATGGTAAGACAAT
AATAGTTTTGTTTTCTACAATATaatacacctatcaacaaaattaaaatt
gtgTAAGGGGACATGGCTAGACAATAATAATACAAGCGGTTTTCAACCAA
GGGTTTAGTATGTTTGTTATGATCAATTATGATTGTGTAACTTTTGGCTT
TTTTATTAATTGAAGCTACTATTATAGAACAATGCAGGGTATTTTCTATT
TCATACTGCAAAGAAATTTTCTTGTTATTGAATGGGTTAAATTCTTTCAG
GAAAACTTTTGTGATTTCTCCctttacttttcattttctcttttagTATT
CTGTATACATTATCCTATTTTTTACTAGATGTTGGTCATGGTACATTTGT
TTCTGGTGTGATCGCTAGTGATAGAGATTGTAAAGGATTTGCACCTGAAG
CTGACCTGTTCATCTTTAGAGTATTCACCAGTAAACAGGTTTGTCAGTAA
CAGGATGTAAatcgaaaatattgaaatattgatTTGATGCCATTTTTAAG
AAGTATTATCTAAATTTGACCACAACTAGACCGCTCGCGTAATACCATAC
CAAGATGGGTCCAATTCCCAGGTACCTTAAATCGCTTAAGAAGTCACATT
CAAGCCCAATTGACTAAGGGgccatccacatagtacgtatgcagtgaagg
ggggagagggggacAAAAGCGTacgtctattgtttaaatgacgtcatttc
tattgttctttgcgtacaaggggggagggggtatccaATATTTGGGAAAG
ATTTTGCGTACATACTATATGGATGACCCCTAAATAAAACAATGATTTTG
ACAATACTTTTTCGATCAttgatcaaaatttgatttattttcaattcTTC
TCTTCCAGGTGTCATATACGTCATGGTTTTTAGATGCCTTTAATTATGCA
ATTTTGAAGAAGATTAACGTCCTTAATCTTAGTATAGGAGGTCCAGATTT
CATGGATAAACCTTTTGTTGAAAAGGTGAGATTTATGTTGTATCTGCTGA
TCATGCAAGCTATCTTGATGAAACATAAAGACTGGAAGTGTGGGATGAGT
TGCAAGTCGCCTAAAGTTATCAAACAACCTTTTTAACAGATATCTTAAAG
CACTGGCTTACTATAAAAAATTCAATCATGTTTTCTGGCCatccaaacaa
acaaaaagtacttgattcaaatttatattttctttttacttgacATAATA
GGTCTGGGAGTTGACCGCGAATAATGTGATCATGGTTTCTGCCATTGGTA
ATGATGGCCCACTTTATGGGTATGTTATTTCGACATTCTGCCTCAAATCT
ATTGCTTggcttgtatttttaaaggaaaatctaTCCACCGATTTTAAGCC
TTTGTATTTTCGAGGAAAATACCATTACTTCATAGAATATATTTATAATG
AAATGCATGGtattaaaatgtatataaactGATTCACAGAAAGAATAAca
ttactttttcaaaactcGATTGACTTTTTATATAATACTTAGTTAAGGGC
CGGGTTTCTATGTCAAAGTGTAACAAGGGTTTCTTACAATCACAGTGAAA
GCAGTCACAACATTTGGGCCAAAGAAAAGGTTTTTCCGAGACCAAGTTTT
AAATTCATAAGTTTTAGAATCTTCCTGGACTTTTTTGATGAAGCTTTATA
TTTATAATAGCTATATACctttttgtaatattttcagAACACTCAACAAT
CCAGCTGATCAAATGGATGTGATTGGTGTGGGTGGAATAGACTTCGATGA
TCACATTGCATCTTTCTCATCACGCGGAATGACAACATGGGTAAGGTTTA
GGAACATGGTATTATCTCACAAAATctcactttttggacctacctggagg
tcctataaattaacctttgttNAAATCCCACCCACACTTCAAGACCGTGA
AAGATAGAACTGATTGGACTGATGAGAAAAAGTTCAATGATGGTAAGACA
ATAATAGTTTTGTTTTCTACAATATaatacacctatcaacaaaattaaaa
ttgtgTAAGGGGACATGGCTAGACAATAATAATACAAGCGGTTTTCAACC
AAGGGTTTAGTATGTTTGTTATGATCAATTATGATTGTGTAACTTTTGGC
TTTTTTATTAATTGAAGCTACTATTATAGAACAATGCAGGGTATTTTCTA
TTTCATACTGCAAAGAAATTTTCTTGTTATTGAATGGGTTAAATTCTTTC
AGGAAAACTTTTGTGATTTCTCCctttacttttcattttctcttttagTA
TTCTGTATACATTATCCTATTTTTTACTAGATGTTGGTCATGGTACATTT
GTTTCTGGTGTGATCGCTAGTGATAGAGATTGTAAAGGATTTGCACCTGA
AGCTGACCTGTTCATCTTTAGAGTATTCACCAGTAAACAGGTTTGTCAGT
AACAGGATGTAAAtcgaaaatattaaaatattgatTTGATGCCATTTTTA
AGAAGTATTATCTAAATTTGACCACAACTAGACCGCTCGCGTAATACCAT
ACCAAGATGGGTCCAATTCCCAGGTACCTTAAATCGCTTAAGAAGTCACA
TTCAAGCCCAATTGACTAAGGGgccatccacatagtacgtatgcagtgaa
ggggggagagggggacAAAAGCGTacgtctattgtttaaatgacgtcatt
tctattgttctttgcgtacaaggggggagggggtatccaATATTTGGGAA
AGATTTTGCGTACATACTATATGGATGACCCCTAAATAAAACAATGATTT
TGACAATACTTTTTCGATCAttgatcaaaatttgatttattttcaattcT
TCTCTTCCAGGTGTCATATACGTCATGGTTTTTAGATGCCTTTAATTATG
CAATTTTGAAGAAGATTAACGTCCTTAATCTTAGTATAGGAGGTCCAGAT
TTCATGGATAAACCTTTTGTTGAAAAGGTGAGATTTATGTTGTATCTGCT
GATCATGCAAGCTATCTTGATGAAACATAAAGACTGGAAGTGTGGGATGA
GTTGCAAGTCGCCTAAAGTTATCAAACAACCTTTTTAACAGATATCTTAA
AGCACTGGCTTACTATAAAAAATTCAATCATGTTTTCTGGCCatccaaac
aaacaaaaagtacttgatttaaatttatattttctttttacttgacATAA
TAGGTCTGGGAGTTGACCGCGAATAATGTGATCATGGTTTCTGCCATTGG
TAATGATGGCCCACTTTATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009266XLOC_009266Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016575-exon-sc0000243-1491911889:193548..193985TCONS_00016575-exon-sc0000243-1491911889:193548..193985Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:193548..193985TCONS_00016575-exon-sc0000243-1510915933:193548..193985Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:193548..193985TCONS_00016575-exon-sc0000243-1575043694:193548..193985Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:199176..199397TCONS_00016575-exon-sc0000243-1491911889:199176..199397Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:199176..199397TCONS_00016575-exon-sc0000243-1510915933:199176..199397Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:199176..199397TCONS_00016575-exon-sc0000243-1575043694:199176..199397Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:199554..199708TCONS_00016575-exon-sc0000243-1491911889:199554..199708Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:199554..199708TCONS_00016575-exon-sc0000243-1510915933:199554..199708Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:199554..199708TCONS_00016575-exon-sc0000243-1575043694:199554..199708Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:200013..200040TCONS_00016575-exon-sc0000243-1491911889:200013..200040Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:200013..200040TCONS_00016575-exon-sc0000243-1510915933:200013..200040Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:200013..200040TCONS_00016575-exon-sc0000243-1575043694:200013..200040Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:200184..200243TCONS_00016575-exon-sc0000243-1491911889:200184..200243Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:200184..200243TCONS_00016575-exon-sc0000243-1510915933:200184..200243Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:200184..200243TCONS_00016575-exon-sc0000243-1575043694:200184..200243Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:200664..200712TCONS_00016575-exon-sc0000243-1491911889:200664..200712Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:200664..200712TCONS_00016575-exon-sc0000243-1510915933:200664..200712Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:200664..200712TCONS_00016575-exon-sc0000243-1575043694:200664..200712Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:201677..201787TCONS_00016575-exon-sc0000243-1491911889:201677..201787Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:201677..201787TCONS_00016575-exon-sc0000243-1510915933:201677..201787Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:201677..201787TCONS_00016575-exon-sc0000243-1575043694:201677..201787Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:204078..204187TCONS_00016575-exon-sc0000243-1491911889:204078..204187Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:204078..204187TCONS_00016575-exon-sc0000243-1510915933:204078..204187Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:204078..204187TCONS_00016575-exon-sc0000243-1575043694:204078..204187Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:204608..204724TCONS_00016575-exon-sc0000243-1491911889:204608..204724Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:204608..204724TCONS_00016575-exon-sc0000243-1510915933:204608..204724Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:204608..204724TCONS_00016575-exon-sc0000243-1575043694:204608..204724Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1491911889:204951..205018TCONS_00016575-exon-sc0000243-1491911889:204951..205018Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1510915933:204951..205018TCONS_00016575-exon-sc0000243-1510915933:204951..205018Clytia hemisphaericaexon
TCONS_00016575-exon-sc0000243-1575043694:204951..205018TCONS_00016575-exon-sc0000243-1575043694:204951..205018Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000243supercontigsc0000243:193548..205018 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.305852	0.230497	0.00116399	0.0378858	1.15091	1.02278	1.25425	1.08149	1.0321	1.24643	1.98862	1.64638	3.78481e-06	0.998443	0.558218	0.685962	0.864329	0.571404	0	1.12142	1.23934	1.83885	0.420699	0.459647	0.568732	1.23055	0.224795	0.231883	0.566779	0.47531
Blast
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BLAST of TCONS_00016575 vs. Swiss-Prot (Human)
Match: MBTP1 (Membrane-bound transcription factor site-1 protease OS=Homo sapiens GN=MBTPS1 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 4.679e-86
Identity = 150/274 (54.74%), Postives = 191/274 (69.71%), Query Frame = 1 
Query:  559 LLTNLLAKFSQKSWKVVERSNPGSQYPSDFSLLKIWNETDDILQELRXXXXXXXXXXXXXXTRRLKNVN-----PYHADHPIEDEDKKEPGNLKRSKLDLNSD---QILNHKSRKILRTIPRQITHALQANSLWLLGHKGKGVKVAIFDTGLPKSHPHFKTVKDRTDWTDEKKFNDDVGHGTFVSGVIASDRDCKGFAPEADLFIFRVFTSKQVSYTSWFLDAFNYAILKKINVLNLSIGGPDFMDKPFVEKVWELTANNVIMVSAIGNDGPLY 1356
             +++ L      +W+++ R+NP S YPSDF +++I  +    L  L     +K V  Q+KV R LK        P +     +      P  L+R+ L L S        H SR++LR IPRQ+   LQA+ LW +G+ G  V+VA+FDTGL + HPHFK VK+RT+WT+E+  +D +GHGTFV+GVIAS R+C+GFAP+A+L IFRVFT+ QVSYTSWFLDAFNYAILKKI+VLNLSIGGPDFMD PFV+KVWELTANNVIMVSAIGNDGPLY
Sbjct:   72 FISSALKSSEVDNWRIIPRNNPSSDYPSDFEVIQIKEKQKAGLLTLEDHPNIKRVTPQRKVFRSLKYAESDPTVPCNETRWSQKWQSSRP--LRRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTLQADVLWQMGYTGANVRVAVFDTGLSEKHPHFKNVKERTNWTNERTLDDGLGHGTFVAGVIASMRECQGFAPDAELHIFRVFTNNQVSYTSWFLDAFNYAILKKIDVLNLSIGGPDFMDHPFVDKVWELTANNVIMVSAIGNDGPLY 343
The following BLAST results are available for this feature:
BLAST of TCONS_00016575 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MBTP14.679e-8654.74Membrane-bound transcription factor site-1 proteas... [more]
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