TCONS_00016176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016176
Unique NameTCONS_00016176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016176 ID=TCONS_00016176|Name=TCONS_00016176|organism=Clytia hemisphaerica|type=transcript|length=151bp
GGATAAAATATTTCCCAACCGAAGGTATCCCCAAATTATACTTTCGTCGC
GCCTTAACGGTTGCAGGAAGACGCGCGTACctacaaatttgaaaattttt
ctattaGTAAAAGTAGATAAGCCTATAAAAGATATATAGTAACGATATAA
A
Run BLAST on NCBI

transcript from alignment at sc0000226:147435..147585

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016176 ID=TCONS_00016176|Name=TCONS_00016176|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0000226:147435..147585 (Clytia hemisphaerica)
TTTATATCGTTACTATATATCTTTTATAGGCTTATCTACTTTTACtaata
gaaaaattttcaaatttgtagGTACGCGCGTCTTCCTGCAACCGTTAAGG
CGCGACGAAAGTATAATTTGGGGATACCTTCGGTTGGGAAATATTTTATC
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009036XLOC_009036Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016176-exon-sc0000226-1491911889:147435..147585TCONS_00016176-exon-sc0000226-1491911889:147435..147585Clytia hemisphaericaexon
TCONS_00016176-exon-sc0000226-1510915933:147435..147585TCONS_00016176-exon-sc0000226-1510915933:147435..147585Clytia hemisphaericaexon
TCONS_00016176-exon-sc0000226-1575043694:147435..147585TCONS_00016176-exon-sc0000226-1575043694:147435..147585Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:147435..147585 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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