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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015746 ID=TCONS_00015746|Name=TCONS_00015746|organism=Clytia hemisphaerica|type=transcript|length=1213bp
GTGGTGAAGGACGATGGTTCGGGAGATTCTTGTCTCGGAAATTTGACTTT
agaactgaatttttttaattcattataCCTGCCAAGATGTTAACATGACC
AAACCAACGAAAGGAAAGACACGTGGTAGAGGATCACAATGTGCTGTCTG
GATGTTATGGTATGAATCTTTGTTTCATTCATCCGTGATGAGCGAATCAA
ATATTGGTTTTGGATGTCACGGATCTATACCGTTCTTTCTGACCACGTCT
AGTCAGAGATTACTATTAACATCGTCGAACTCACCACCAGCATACAGGAC
CGAGCCTTAACACTTTGGTATTGACTGCAATACCCTTGCCTCACCACGGA
TTGCGCTATAGAGAAAATGTCATATAGAACTTTGAAAATCGCTGCAGATT
ACAATACGATATAAGTTTGTATACCCCCTGgatttattcattttttggGA
CCCATTAATAATATTCTGATGGATGTTTGGTCAATTCGCTGCCAAAATAG
TGTACTGTTACTAAGTTAATATATAGATATTTATCATGTTAATCGAGACG
GCAGTTCTCCTGCTTTATGCTTTTTACGTAGATTTTGTTATTAAGTCGTC
ATTGTAAACTTCGTcagctatatcattgttttaaagttttaaaggttGCT
CAGCTTGATCGTCCATgattattattttaaaaacagattttttctctcgc
ttTTTTCAGGAAATCTGTTCAAACGACGGCGAAATTTAAAGATCCTGGAA
GCacttttttcgtgattttttagACTTCAAAGCAAAACGTACAACCTTGG
AATCTCTTCTATGGTCTTTTGGAAAACATGGTGCGGATTAGCTCTGTATA
ACAGAAAGAATGTAGAGCTCAGTTAACCATGGTTGATGTTGATGCAGATG
ATCGTCACTGAAGATTGATGCAGGATACGACAATGACGTCACAAtacttg
tgttttttttttacttaaaaggAAACAAATAAAACTCtccgtcataaatt
ttgaatcCCCTCAGATCCGCCACTGCACTTACTTCTATAGCTTTTTTAGA
CCactttcaagaaatatttaatattaGCCCCATTCAGTTTTCAATCTCTA
TGAATAAATTTCTCAAAGGGGTTGAAATTTAGGGTATTTTCTAAAACGGA
CAAAGTTTTAGCCAATTGGGTCTGTGAGACAAGGGTGTATTGCCGTGATC
ATAGTAAGCCGTG Run BLAST on NCBI transcript from alignment at sc0000216:298721..301207+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015746 ID=TCONS_00015746|Name=TCONS_00015746|organism=Clytia hemisphaerica|type=transcript|length=2487bp|location=Sequence derived from alignment at sc0000216:298721..301207+ (Clytia hemisphaerica)
GTGGTGAAGGACGATGGTTCGGGAGATTCTTGTCTCGGAAATTTGACTTT
agaactgaatttttttaattcattataCCTGCCAAGATGTTAACATGACC
AAACCAACGAAAGGAAAGACACGTGGTAGAGGATCACAATGTGCTGTCTG
GATGTTATGGTATGAATCTTTGGTATGTTTCGATCTAGTGGTTTTGCAGT
TTTGAGAAAGTTTAAAAGgcaatttgaatgtttttaagCTATAGATTTTC
CTCTCAGCCTCTATTTAAGAGAtcgttttttctcaaaacaagGCAATCTT
CAACTTTAATCTCAGTGTTTTGATTTTCGGTCTTGAATCTTGTTGTTTAC
TTGAGAAATCATGTCTTTCTCATACATTAAGAAAAATTGTCTCGTGAAAC
ACTTATTTTTGACGTTTCTTTAGGAAATTTGAATTGCTTTGTTTGCGGCA
GTTTTCGAAAGAGTACTCAATTAATTCTCTGTCAGGTAGTAAAAAACGAA
ATTAGCTTTTAATGGCAAGAGAGAGGGTGCGAAATGATATTTACTTTGGT
GCTCACATACATCAATTGAGTATTTTGTGAAGCTAGATTTTTTTGTACCG
TTAATGTTGGTTTGAGAATGTGCAATTTAAGGATTATACGTTTCTGTGTG
TTTTGAggttaatattttttttgttgaccTTGAAAATACAAACCTAATTG
TTCCTGATTAACATTACACACAAATGAAACCCATATTATAGGGATTAAAG
TAATTAACGATGAAAATAGTTTTGTCACTTGGAAAACAATatcttttgtt
tcaaattttattgcaacactctttgaaagaaaatttattgcTGAACAGTG
ACATCCAGTAACAGTTGTATTGCATTTCTGTTTTTATTTCACATTCTCAA
AAAAAGCAACAGTTAACTGAAAAGATAGTATCTTGGAAATAAGAATGTCT
GGTCGGGTTTTAGAATCTATAGTTTTGGTTCTGATTTTTCATGAATTCTT
GTTTGTAGGTTTTCTTGAAATGTCAATTTAAGGTTTGTACATATGGTGTA
AACAATCCAGCATCATTATTTGTCAAATTGTTCGAGATTTGTAAGGATTA
TTGTGCGTTTAACTTGTTGCGTTAACGTTTCATGTGTgtaatgaattttc
aaattcattatTATCTACTatgttctttataagaatacccaTAATAAGTT
TTTgaggccttcggatgttcttaacgtttagattttcaaccctgaaatgt
tctcaacatgGTCTTATTTTCACCGATGTGGGAGTATTTTTGTACATGTT
CCCAAGATATATTTTAGATTCCGCAaggccttaaattgttcttaatactC
TGTATGGCTTTTGAAAGTCGAAAACTTTTTCGAAATGGGGTGCTTAGACA
GTTTATCTTATACCTTTTCTTATAGATCTTTAATCTTTGTTTTCAGTTTC
ATTCATCCGTGATGAGCGAATCAAATATTGGTTTTGGATGTCACGGATCT
ATACCGTTCTTTCTGACCACGTCTAGTCAGAGATTACTATTAACATCGTC
GAACTCACCACCAGCATACAGGACCGAGCCTTAACACTTTGGTATTGACT
GCAATACCCTTGCCTCACCACGGATTGCGCTATAGAGAAAATGTCATATA
GAACTTTGAAAATCGCTGCAGATTACAATACGATATAAGTTTGTATACCC
CCTGgatttattcattttttggGACCCATTAATAATATTCTGATGGATGT
TTGGTCAATTCGCTGCCAAAATAGTGTACTGTTACTAAGTTAATATATAG
ATATTTATCATGTTAATCGAGACGGCAGTTCTCCTGCTTTATGCTTTTTA
CGTAGATTTTGTTATTAAGTCGTCATTGTAAACTTCGTcagctatatcat
tgttttaaagttttaaaggttGCTCAGCTTGATCGTCCATgattattatt
ttaaaaacagattttttctctcgcttTTTTCAGGAAATCTGTTCAAACGA
CGGCGAAATTTAAAGATCCTGGAAGCacttttttcgtgattttttagACT
TCAAAGCAAAACGTACAACCTTGGAATCTCTTCTATGGTCTTTTGGAAAA
CATGGTGCGGATTAGCTCTGTATAACAGAAAGAATGTAGAGCTCAGTTAA
CCATGGTTGATGTTGATGCAGATGATCGTCACTGAAGATTGATGCAGGAT
ACGACAATGACGTCACAAtacttgtgttttttttttacttaaaaggAAAC
AAATAAAACTCtccgtcataaattttgaatcCCCTCAGATCCGCCACTGC
ACTTACTTCTATAGCTTTTTTAGACCactttcaagaaatatttaatatta
GCCCCATTCAGTTTTCAATCTCTATGAATAAATTTCTCAAAGGGGTTGAA
ATTTAGGGTATTTTCTAAAACGGACAAAGTTTTAGCCAATTGGGTCTGTG
AGACAAGGGTGTATTGCCGTGATCATAGTAAGCCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015746-exon-sc0000216-1491911889:298721..298892 | TCONS_00015746-exon-sc0000216-1491911889:298721..298892 | Clytia hemisphaerica | exon |
| TCONS_00015746-exon-sc0000216-1510915933:298721..298892 | TCONS_00015746-exon-sc0000216-1510915933:298721..298892 | Clytia hemisphaerica | exon |
| TCONS_00015746-exon-sc0000216-1575043694:298721..298892 | TCONS_00015746-exon-sc0000216-1575043694:298721..298892 | Clytia hemisphaerica | exon |
| TCONS_00015746-exon-sc0000216-1491911889:300167..301207 | TCONS_00015746-exon-sc0000216-1491911889:300167..301207 | Clytia hemisphaerica | exon |
| TCONS_00015746-exon-sc0000216-1510915933:300167..301207 | TCONS_00015746-exon-sc0000216-1510915933:300167..301207 | Clytia hemisphaerica | exon |
| TCONS_00015746-exon-sc0000216-1575043694:300167..301207 | TCONS_00015746-exon-sc0000216-1575043694:300167..301207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216 | supercontig | sc0000216:298721..301207 + |
Blast
The following BLAST results are available for this feature:
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