TCONS_00015618 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015618
Unique NameTCONS_00015618
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2261

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015618 ID=TCONS_00015618|Name=TCONS_00015618|organism=Clytia hemisphaerica|type=transcript|length=2261bp
AGCGTATGCACAATCAGTTTTCAGTGTTATCGTAATTATATTGCGGATAT
CTTGCTCTGGAACACCGGAAAGGCTGCGGAATCTTCCCCTGTTCCAGAGC
ACGAAAAAACAGCACTTTATTTTGCTCCAGTTCCAGACGTTTCTGGAGTG
GTCCTCTACATAAAAAATCCCACTTATAGAAATGGTATACCTGATCTAAC
TCTGTTCGGCAGCTTGGACAATATTTCTGGTTGGAAAGAACTCTCATTCT
TGCTGAGCATTTAAAGCAAATTGGATGATCACATGCTCCAATGGAAAAAC
AGTCTGAGTCTTCACAACAAACCATACATGTTATTTCGGCTGTAGTAGAA
GGGTTTTTAAGGTACTGGCTCCCAAAGACCGATGTAGATGGGTCCGCATG
GTTGGGGACGCATGGCAATGAATATGGCGGACCAAGCAGTTGACGAAGTT
TATGAAGATCAAGAGAAAGACCCTTCAGTCCACAGTTTCACATTAAGCAC
AGGTTGTTCTTGGCCAAATGCTGTCAAATGGTCATTTGATGGAAGAATTG
CAATTTTGACTGACAATGTCATTCATGTTTTGTCCTTCAACAACAGTACA
AAGAGGCGGCAACCAGGTGAAGAGTTTGGTCTAACATTTGATTCATCAGT
TATTCCAATAACACCTTTCCAATGTGGAGATGTTGGTATTTCACCAGATG
AGTTTGGCAATGGTGGTTTTAAGGAACGTCAACAGTTTGTGTTGGATTAT
GGGACAGTGAGAGATCGAAGTGTGTATACAGATCCTGATTGTTATTCCAA
CTTACATTGGTCACCTCTTGGATGCACTTCAGATGGAAGATCAATCCTAG
CAACACAATCAGCCAATGGGGAAATCTACATTCACACCCTCTCCAATATG
CTTGGAAAATGGGAACCAACTTTCCCTGTGACAAAACATTTACAAGATTA
CCTGAAACAGAATGCATGGTTTACAGGTGGGATAGAGGAGAAGTGTACAG
AGAAGGATTTGCAGTATGAAATGCAAGAATACTGCCGCAGAAAACGTTTG
TTATACACTGTGACTTTTGCGTGGTGTCCTTTGGTATGGACTTGTAATGA
TTGTTTAGTCAACCAGCACCCTGAGAATATGTACTACACAAACTATTTCA
TCAATTTTGCTTCTTGCTGTCATGGCAAATACATGTTTTGTACAGCTAGT
CGTACTGGTCATCTTTTTCTGTGGAACTTGACGTACCATAAGCGTCACGC
GTCCAAGAATGATTTGGAAGTAGCATTTGTTTATGACACCAAAACAACAT
GGCCCTTTTCCTCATCATGGTTTCAATATTCTACAAACGATGTTTTGATA
GCAGTTGGTTACACACAGGGCACTGTCACTCTATTGCATTTTCGTGTCAA
TTACAATACCGAGGGGAATGGACAACAAACCATCAGTTTTGTTGATAAAC
ACAACATTTGGGACGATATTGATGAAATCTCCGTCACTAACCTCGCTTTC
ATCCGAACTAAACTTGGTCGTTTGAATTTAATTGCGATCAAAGGAACAGA
GATACTGATATTCCGTGAACTCTCCATCGAACCTCTGCGATCAGTATCGT
GTGAGCAAGCACCAACATGCCACAGTTCTCCCATTGTCTCCTTGCAAACT
GTCAAAGACAGGTTCATTGTGACTGCAAGCCATGGTGCTACTCAAGGATG
AGATCAACCCATTTTGTGATAGCAACATATTAAGAGGATTCCGGTGTTGT
GGTTTAGCCGCTGATCCATCACTGTGTATGTTCGTTCGTGTGTCTTGCCC
TTCAAGGCTATTGCTTCTTCAATCCTCTTTCGTCAAACAAATGGAGGTCT
GTTTTTTACCGTTCTTAAGCACTGAAGACATTGCACAGCTTCTCCTAAAC
GAAGAAATTGACATGGACATTATTGTGTGCGAATATTTTCTCATTTCAAC
GGCGGAGAATTTCATCCTACCAAACGTTTTACATCCGTTTTGTGAAGCAC
CAGAGTCATACGATCTATCCACTCGAAAGCTGCAGATTTATCTTTATTTC
AATCGAGTGCGATACATGCAAACTACTGGAATGAGAGCAAACGCTTTAAC
AAACGAGGAAGTGAAGAAAACATGGACATCAAACgtcaataaaattgaag
atgaagtcatcaaaaaaatcaacaaagccATTGAAATCCAATTCTTCAAA
GAAATGTTGTGTAAATTTCTTCAATTGCATGAAAATGAATGGCTTGTCCT
CACAGATGAAG
Run BLAST on NCBI

transcript from alignment at sc0000214:338911..354054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015618 ID=TCONS_00015618|Name=TCONS_00015618|organism=Clytia hemisphaerica|type=transcript|length=15144bp|location=Sequence derived from alignment at sc0000214:338911..354054+ (Clytia hemisphaerica)
AGCGTATGCACAATCAGTTTTCAGTGTTATCGTAATTATATTGCGGATAT
CTTGCTCTGGAACACCGGAAAGGCTGCGGAATCTTCCCCTGTTCCAGAGC
ACGAAAAAACAGCACTTTATTTTGCTCCAGTTCCAGACGTTTCTGGAGTG
GTCCTCTACATAAAAAATCCCACTTATAGAAATGGTATACCTGATCTAAC
TCTGTTCGGCAGCTTGGACAATATTTCTGGTTGGAAAGAACTCTCATTCT
TGCTGAGCATTTAAAGCAAATTGGATGATCACATGCTCCAATGGAAAAAC
AGTCTGAGTCTTCACAACAAACCATACATGTTATTTCGGCTGTAGTAGAA
GGGGTGAGTTGACTATCCCTAGTATCCATAACTAACAAATGATtgataaa
ttcttgaaactTAAGATTTACTTTCAACAAATTGAAACTTTCAAGTGAAA
ACCTCTCAAAACTAGCCAAGACTGCAAGATCTAGAATTTCTTCCAAATAA
TGTCCCACTTCGATCACTTCGATCCGATGACGTCTCCTTATGTAACACAG
CTAGAGGTGGAACCCTGAACATAAATGCTAAGGAGGTAATATTTCAGAGA
AAGAACTATTCTTTAATCAGGAATTACCCCCATAGTGTGAGCGTTTCTAG
GAAAGATTTGAGAAATTGATTACGTAATTTTCACGACTTGCACCACTTTa
tttattgcATACTCAGCAGTTTTTAAGGTACTGGCTCCCAAAGACCGATG
TAGATGGGTCCGCATGGTTGGGGACGCATGGCAATGAATATGGCGGACCA
AGCAGTTGACGAAGTTTATGAAGATCAAGAGAAAGACCCTTCAGTCCACA
GTTTCACATTAAGCACAGGTTGTTCTTGGCCAAATGCTGTCAAATGGTCA
TTTGATGGAAGAATTGCAATTTTGACTGACAATGTCATTCATGTTTTGGT
ATCTTTTCATTTTatgtacattttagattattttaaGGGGTTGGTTAGGG
GTCACCCACATATCGATGTTTCCTGCAACTAACGTCATTGTGACgcgagg
gggtggggggggtcAGAGCCTATGGCGCTAAGAAATTTCAACAGAATATC
GATTTTTAAACCTGTAACATTTTGTATTCCATCCTTCGCTACACCTGTCA
TCTTAATTCAAACGCATAAAATATAACAGAAGATGATATCTAATACCCTT
CCGTTACGTTTGTAGCAATATGTTATTATCTCCCTAATCATAAAAACAGA
GGTACCGCAATAAAAAATAGATGGGCCATATTTTGATATACAAGGGCCGC
ACTGACGGACCGTCTACATAAATATGACAAAACAACGAGCCGTTTGTCTG
GGGACAAACAAATGTGAAAGTCATAAGTCAAAACCACTTGTTTTAAGACC
GTGCGAAACGAAGCACAAAAATCAATGTGGCTGGAATATCAATATCTgta
ataaagaagaaaaattactttcatcgatttttggtaTATATATTTATGTA
AATGACGCTCTAAGAaaggggggtgggggggttCTTCAGATAGCGTCACA
ATGACGTTAGTTGCAGGAAAAAACGATATGCGAGTGACCCCTTACTCCAC
TCcacacaagtgttacgcgtaagccaaatcgcgtagtACGAACAACCTGT
AAATTGctgagtacaggagaaaaaaaatcaaaattcaaaatggcggccaa
gcccatgctgataactatcaaaaatctttgtttttcaattagctattgca
gctcaataaatcaatgaaataatttgaaataaaatgtaaacaaaccttga
acctttcaggaatccaaataaataaaagtattcatctaaagtgaagatta
catttcaaaataaaatgatttccaaaccaacctaaagtcattgtctgccg
actaaaaatttctctgggggtcactggcaaggagttacgacttcagactt
tagattccaattcttgtataggctgcaactacactacCAAATGATCTGTa
aatacttccaaatgggtccataagttaagaaaatgaaattatcatatagc
agggggttttgtttttaaaaaaaaacttcaaaataaaattgtttaatgaa
cttgttacttaaaatatcacttactttacataatttatttatgatataac
acccctttcttaaataatggcctcttaaagtattttatgtttgccgcaag
aagggagaaaaatttaacttgacccctggttttttctttctttttctagc
tggttcccgcgtgttagtgtagaactttaaaaaccgtctaaaatcacgga
tggtcacgtgaccagaattttttaTCCAGGGCATTGCCGTggcggcaatg
ttttgctttagtgagattgaccattttgttattttgatttgagcgggcga
aatttttgtacaaatcaaaatatggcttcgttggaataccggttgaaaca
cttgtgactCACAAATTGATGATTTTAAGTTCAGCtaaaacacccaccca
ccccacaTAACGTCACTCacaactagccgtattgtataagggttgcgaag
cgatccagactccacgtctcaattcgcaagttgctagcaaaataaagAGA
CACTCTAATAAAAATCCCTCCAGCTCTAATGAAGCCGCTatattgattga
ccttatttgattatATACTTAaaatacttgctgttaaaataaaagtcaag
ggattataaagatcctttctgtcaccgttcaaactaatttctttccattt
aacaacaaaataaacaaagaattAACTTCAgattcggcttccggtaattt
tgttgctgttcacacTGCTaaggtacaccattttaaaaaggcatttttCC
CAGTCCTAGCTatcaaaccgagaaagttttcgtggcttcaagccaaacaa
TTCAAGgccattttgataaaatcatcggtttgaagatgtgatttatatag
caaattttatagcagattttcgcttgggatagaagttaaaggtacgtgca
cacaatatagcaaaactgctttgctcataaattcgcttctcAAAAATCTG
GTACtttgcttctttttcttcagtCAAGACCAACACCAACCCATGCTCAA
TGCCATCACCATATTTTCGTATTTTCGACTCGAGTGTTGCCTTGTGTTGT
GACCAACGCGGCTTCGACTGGTTTATATCTAGACCCGACTTACCCAAACT
GATAAATAGAGGCATTGTGGTATAGTtttcattgaccttggttgctgcac
aaggcgactgaggttcgattcccactcgcagcagTTCACTAGTGAACAGT
AGTGAATGAACCTTTGCCCGGGTCAGCCCATGCAAtatgaggggaattgg
gtagtcagtccaagttGCTGACTGGGCGCTCATtaaaagcgtctatagtt
gcgaaaataagCCTCAAAGTCCCTGCAACTCAGCCAAATAGAAATAAAGC
TCGATGCCCAAAGTACTCGTTATTGCTGCGCTGCCAGCTGGAGTGTGGCG
CTAAAAAAATGATGTTTCGGACCGGAAATTTTCGATCCAGTTCTGTACTG
TACTCTTTTCTGATACTTCCGTATCCTTTTCCAAGGCTTTCCTTTTCTTT
GATAATTTTCGAGGTGCACCTTGTCATTCAACAGtcaacaaaatgaaaca
aaatgaagTCGAGTCATCATTATACACACTCAACTTTTGAGGGGTCTGGT
TATGGTTGGATGGTTCTGTCAACTGCTCTCACTTGGGACTGTTGGTCAAA
ACATGGAACTGTATGatattttaactttgttttcattcaaaatgaccgga
tgcTAATTgtagaattagagaacgcccaccGCCCACCACCCATAGTGTCt
ccccctggattcaggggggaatgggttttgaggtcaaaaggacaTATAGG
GGGGAAAGACGTTAGTTTATTGGATTTGGAAAGAAAAGACgttagtttaa
aaaaattgtagatttaaaggggacgtcagcccaaatttttgtcacacatt
ttttgttacatttagaaaatttagaacAAGACGATCAAAACAAGCTAtat
attattgaaagttttttgaaaattccgcTTCTTTTTAAATCTGTGACGTA
ACGTGCTTCTCTACTTTTTAAACAACATCTGTTAAACAAGATTTTTGGTA
AAAAGAGAGAGATTTCATAATTATTAAACAGGAAAGTCGATCTGCTTTTT
TTCCttcagaaaatttgatctgttcaTTAGTTTTGTCCAGTTTATCTAGA
TACTTGGCTGAAATACGATCTGTTCTGAATATAGAATTAGTGCCTTCTTG
GAAAATGGACGATCTCTGTTCTAAAAATTGCTGGCGAAAAAGAGCAGATA
TTTGTGAGTTATTCGGAGAAATTtgttattaaaagaaagaggagggGAAA
CAGAAACACACTATCTACGTCACAAATTTACTCTCCTTCGTTTATTTTCT
CCATCATAGAgtcaaattaattaaaaataaaaatttgaataattcatcca
aaaaaaaagattttttattcgTTCTTTTTGCAATCACTTTGCAAGTTCCT
GAAAAAGTAGGTTAATCTAGCAGCctaagcttaaactcctatatcaggat
tagaaactaggctagtcttaccttaccgcggttgggcctatccgcaaaat
tcaaaactttcaaaattttgatatggtaGTTGAACATTTCCTCTTCGGAC
ATTCCTTGATAAAAATGATACTTCATTCTTCTCTTCAATTCGTCACCCCT
TTTTTGCACTTTTCGAATAAAaatactaaagtctattcacgataagtgtg
cactcttttttcttttatctataacttttgaaggaattcttcaatcttta
taaatttggcaagtaagtggaacaatttgaaataaaaaaatctttaaaaa
aattctaaaaatgacgatgaaaatgaagaaaaaaaaatgacgagagattc
tttgatcttaggaggtcatcgctgtgaagaaatttcattaaaatatttaa
tcaatataaagttatgatataaagttaataagtgattgaccccaaaaaac
agcaaaaaacagcgtttttagacgtcaatcagcctgaatcagcttataac
tttgtttgatatcttatGACTGAtagattatttttgagaaattttttcac
agtgacgacgttcgatgatcaaggatgaTCACATCAGTAAAAAtcatagc
acttttctacaagatcttcatttttttaacttcttcattttcatcttcat
ttttagaatttttttaaatatttttggacctaccccggtggaggtcctat
aaattaacctgtgtttgttcgtctgtccgttcgttcgttcgtctgttaca
aacttctctcaggattgaatcataggaatcttttgatttttggtacaaag
gtgcaaaatggtggtggccaaaatgtgacaaaATGTgaattttgggccaa
tttgggccaaaaaacggctaaaaacgggttttttagactttgtgaaaaat
tgggtcattaattttttctgattttttgtatgaaagtagggtaccatcat
aggtaaaagatggctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtgctcatgagggcttacttttagagag
tatgtgtgtttagacataaaattttggttgcttagcgtgtttttatagaa
aaactggccaaattcgatatttctttataagcacattatcaattatttag
gtattagcttttctcgagattggctctttcattctttatgattttttgca
aaaagatgcataactttaaaccatcaaatgtgacggagcccgatttttga
aaaaaaatgtttttgggcaaatttgggccaaaaaacggctaaaaaaaggt
tttttggactttgtgaaatattggatcattgtattttgctcacgaagtct
tgaatatgaaagattatttcaagagcatgaaattttggtttctaaaggtt
ttttttataagaaacaaacgactaattttaatagatcgtcactatttgtg
ttctgagtgattgtttaacggtcatgctcacgtagatatcaattatattt
gttaaatgcatatccaggtaggtccataaaagtatcacttgttttatttc
aaattgtttcactcactaatatctttccaatgataccaaatttataaaga
ttaaagaattccttcaaaagttataggtaaaagaaaaaagagtgcacact
tatcgtgaatagactttagtctCTGTATGAAGCATAATAGATCTTTTAAA
CGACAggaataaaaattcaaaagtattCACAGGAAAACAATGATAGTGTC
CTATTTACCgatagaaatttaaaattttttgcagATTGaggaaagatttc
aaattttttgcgggTACTTTATAATTTCAACTGTaatggaggtcctataa
attaacctgtgttcgtccgtccgttcgtcttttaccaacttttctcagga
ttgaatcatatgaatattttgatttttggtacaaaggtgcaaaatggtgg
tggccaaaatgtgacagagcacatttcagccaaaaaacagctaaaaaagc
GTTTTTAATAAGACttagtgaaaaattggataattatttttttgcatgaa
aggataacatcattggtaaaagatggctgaagcagattttcgcaaaaaaa
ttttttcagctcaaaaaacgaatctttatctataagaattgctatttata
agcatagatcaattttttcagccatgttattatttttattagtttttttt
taatgaaaatgtcaCAGTGGAGggcaatggtttgagttttctagaaacct
ttattaagctgtgcatttttctgataatgaaatgtttttataaaaaaagc
gtttttaatagcttttttatttctttttcaaaagtctttttcaatagtgt
tgatagtttctcccaatgttttcattatatttttttgtattttgaccagt
tatgccTTATGTGTTTCAtcgtttcaatgttcattgattagttttgataa
ccaggtaggtccataaaagtatcacttgtttttccTTAACTCAATAATAT
TTAACAGTCCTTCAACAACAGTACAAAGAGGCGGCAACCAGGTGAAGAGT
TTGGTCTAACATTTGATTCATCAGTTATTCCAATAACACCTTTCCAATGT
GGAGATGTTGGTATTTCACCAGATGAGTTTGGCAATGGTGGTTTTAAGGA
ACGTCAACAGTTTGTGTTGGATTATGGGACAGTGAGAGATCGAAGTGTGT
ATACAGATCCTGATTGTTATTCCAACTTACATTGGTCACCTCTTGGATGC
ACTTCAGATGGAAGGTTGATCGCATATTttgcatatttgtttttatttgc
ttCCCAAGTTTTTTAGTATTAATTATAGAAAAACCTACTTCTCCCCATTT
GCAAATGTCGGAGAGATTCTTTTGGTATCTATCTCCTCAAAACTATGTCt
tgatttttagaattttttaacaaactAGCGTTAAAATGCTCAAAATCgag
aaaatcttattttcaaaagattcaCTCTAATCCACTTCATTTTACGCACC
CCCTTctcggtaggattttttcagccagtgtgGATAACAGACACAAACTC
GATGGGGATgctgatattcccatattttttatggccaGGGATTTAagtct
tttgtttttaatatcagaaaattcagtggggatgtgaaaaatagcacaat
ctttatcagtgaggattggtttatttgattattttcagtggggacacaAA
TTGAATgataattttccaccagggatgataatttggccaatttttccagt
tggaaggggtcccagtgggtctgtgagacgGGGGTGTTTTACACTAAACA
CTAAACAGCTTTCTGCTAAGAAAGCCAGTATTTCTTTCTCCTCGCTAAAA
TTCTTTTCTTGTTTTCGACCAGATCAATCCTAGCAACACAATCAGCCAAT
GGGGAAATCTACATTCACACCCTCTCCAATATGCTTGGAAAATGGGAACC
AACTTTCCCTGTGACAAAACATTTACAAGATTACCTGAAACAGAATGCAT
GGTTTACAGGTGGGATAGAGGAGAAGTGTACAGAGAAGGATTTGCAGTAT
GAAATGCAAGAATACTGCCGCAGAAAACGTTTGTTATACACTGTGACTTT
TGCGTGGTGTCCTTTGGTATGGACTTGTAATGATTGTTTAGTCAACCAGC
ACCCTGAGAATATGTACTACACAAACTATTTCATCAATTTTGCTTCTTGC
TGTCATGGCAAATACATGTTTTGTACAGCTAGTCGTACTGGTCATCTTTT
TCTGTGGAACTTGACGTACCATAAGCGTCACGCGTCCAAGAATGATTTGG
AAGTAGCATTTGTTTATGACACCAAAACAACATGGCCCTTTTCCTCATCA
TGGTTTCAATATTCTACAAACGATGGTATGataaagaacttttaaaatga
CACTGCGTTATTTCAAGACTGCAAATTTCCATACTTTTCCCTGTATCCAC
GCCCATCATCAAGGCCACCCTCGCCCATCACCAAGGCCACACCCGCCCAT
AATCAAGGCCATAATCAAGGCCATCTACGCCAATCATAAAGGCCATCCCT
ACACATAATCAAAGCACAAGGAGTCATTTATCTCTCAGTTTTCAAAGAAC
TCTTCTGTCTCACACTGAGTTTCAATCTCAGAGAAATATACATaaagagt
tttttttcaatctcaaaattctATACTCTACTTTAGCAAAATAATGTTGA
TTCTTCTACCTTTTCAGTTTTGATAGCAGTTGGTTACACACAGGGCACTG
TCACTCTATTGCATTTTCGTGTCAATTACAATACCGAGGGGAATGGACAA
CAAACCATCAGTTTTGTTGATAAACACAACATTTGGGACGATATTGATGA
AATCTCCGTCACTAACCTCGCTTTCATCCGAACTAAAGTAGGTTTTGTAT
TCTTGAGAATGTTATGCTTATTATTCAGATGAAATTATACATCCTTTCCT
TCCTATGTTGAGCTTATAATTCTTGGGATTAACCCCATGAATTTTACTGA
AACTTTAGAGACCCCGTGAATTTTTGGTGTATTCTTAGAGCTCTCCCCAA
GAGGTCTTCCCTGAACGGTAAACATCCGACTGTCTTAACTTGAGAGAGGG
TTGGCTTTCGTATTTTATTGGAAGGGTATTGTATGGCCGTccttagacta
gtaaactagtcgttgaaaacagacccatatacaaaaaattcaagcttcaa
ataaaaagaatcgaagatatgaggttgcgtgtcttttctgaatttcaacg
actagaagcttcttccctcaaaaaacgttgtttaattttacaaccttttt
taggtttttgagaatccatccaacttttttgactaaatgatatttcatag
taacattaaacatgggaacatgtaaataaatgagcatttcaaaaaataca
ataaacagacagaaaaataaatgcaatcccgcacgggtcagacatacaga
aatctgtatgtctctccttacgaatttgggtgaagaaaaaaaggcgttgg
aagaagcttctagtcggttattttccttttctgtcacgcgcgctgaatat
ttaattagtgtttacattatttgattgacagttttagtATAAGTAacaac
cgactagtttactagtctaggccGTCCTTGGTTCTACTATGAAATACCAT
TTTGCACTTTTGCAAATGCATTTCATCCTGCCTCTGACTACCAGGAGATT
TTTATCTCAAACTTTCGTTGACTTTGATTTCCAAAATTGAAGTTCTATTC
AAGATGAATTAGTATTAACCGAATTTGAATACGAAgatacaaaaaacttt
ttagaaagcAGGTCCGGAAAAAACTtaatttatatcaaatttatatcaaa
tttgTATAGAGAAAAATTTACTTCATTTGGTTGAtcaatttctttttgga
aaaatgttagGGTTACTGTTCAACTTGAATTTAACATGTAATGCATAGCA
AATTGAAAGAAAGAGACTTTGATTTATTGTTTAGAACTTTAAGTTTCGTG
CCGCCCACATCGAGACAATCATCAGCTAAATGAAAAtcgtttgaaaaata
tattcataTACAATGGCTTCTTCGTTCGGAATTCATGTAATGCATTTAAA
tgtaaaagtaaaaagttttgacatttttgtgaaagtattgATTAATATTT
GGGAGAGTTGGCGGTATGCAGGTACAAAAACTGTAAAAATGGCATCatta
ggttaaaaatattcgtgtaaataaaaagtaaaagcgTGAAAGAGTATCCA
TTCCTATCTGATTCCATCTCTTGTGGTTTTTCGGACATACAAATATAACT
GGCGAAGAAGAGAATAaagatttttattcttttgttaCTTTTAGCTTGGT
CGTTTGAATTTAATTGCGATCAAAGGAACAGAGATACTGATATTCCGTGA
ACTCTCCATCGAACCTCTGCGATCAGTATCGTGTGAGCAAGCACCAACAT
GCCACAGTTCTCCCATTGTCTCCTTGCAAACTGTCAAAGACAGGTTCATT
GTGACTGCAAGCCATGGTGCTACTCAGTATGTTGATATTggtatgttttt
gtttttattacaaTCAAGAGTGTTTTCTCAAAGTTTTACTTTCTTCAGGG
ATGTAGAGATTTGGAATCCaggtttttataagataccGGACGACCcacga
aaatgaaaaatgtcgAACAGAAAATTGATCGTTTTTTAAATGGAAATGAT
TTTCAATAGGTTTTCAATTATCATTAATATCATAATATAATATCTAATTG
TATACACAACAACGTTTTCATACTGTGCATTCTCTTTTGTTGCAGAGGAT
NATTGTATACACAGCAACGATTTCATACTGTGCATTCTCTTTTGTTGCAG
AGGATGAGATCAACCCATTTTGTGATAGCAACATATTAAGAGGATTCCGG
TGTTGTGGTTTAGCCGCTGATCCATCACTGTGTATGTTCGTTCGTGTGTC
TTGCCCTTCAAGGCTATTGCTTCTTCAATCCTCTTTCGTCAAACAAATGG
AGGTACATATTATTTGTTCATCGATATGCGATTTATCGCCTATGATTAAA
GGATATGATTATATTATATCCTTCCATTTGATTACCCAGTATTTTTAAAC
ATAAACGAACAAATTATCTCGTATTGTCAGCGCTTCatttctatatcata
aaaacTCAAATATCCTTGAAAATCAATATCCCCAGTATGGTTAGTGAAGA
CCTTGCcatagacgactaattcaggattaaattaaatttagaccTAAttc
aataccttatcggcccttatAACGCCAAAGctctttttcaaattcagcCC
AACTCCAATTTTAATACCGATTCCTTACGCCAGCCCTTATTAAGCCTTTA
TATTTCTCCAAAACCTATTCAGTTTTGATCGAACAGAGAAttttaatttt
agaattttaatttcaattaccttaagggaagaaattttcgcggaatttaa
tttcgtgaatttgggcgtaattcgcgaaattaaattccgcgaaattcgat
tttttttcttcttcttttattttgttgtttttgaccaggtattaccaaaa
gGGATGGACACAATTGATTTTTAAGCATTATAACGTGTATTTTTTATCAA
ATATAAACAAATATAAACAACTccgtgatgcttaaaagttaatctaagtt
gataacttcttctcaatcgcgaaattaaattccgtgaaacttttgaaatc
ggctcattcgtgaaattaaattccggggaatttgccattttgaaactctg
attcgcgaaattaaattccgcgaaaatttcttctcgcgaaaatttcttcc
cttaataAGGTATTGTAAGCCCAGTTAtaatgagttttgaggattttatt
ttaccTTGCCCCTTCTTTTTGCGACACAATGTATACCTCTATATTAAACT
CTCCAGAGAGAAATGCTTTACATTTTATCCTTGACATTTCTCTCCCCATT
TTCCAGGTCTGTTTTTTACCGTTCTTAAGCACTGAAGACATTGCACAGCT
TCTCCTAAACGAAGAAATTGACATGGACATTATTGTGTGCGAATATTTTC
TCATTTCAACGGCGGAGAATTTCATCCTACCAAACGTTTTACATCCGTTT
TGTGAAGCACCAGAGTCATACGATCTATCCACTCGAAAGCTGCAGATTTA
TCTTTATTTCAATCGAGTGCGATACATGCAAACTACTGGAATGAGGTCAG
TAGCTGCTAAAGCAATGCAGTGTGGGTAATCTAAAATTACTATTCTTTAC
CTGGTGTTTCATTTCAGAGTGAACGCTTTCTAGACTTTCAAAAGAAAGAC
CAAAGAATCGGATTTTCATTTCAGAGCGAACgctttttagactttcaaag
CATAGACCAAAGAATGGGATTTTCATTTCAGAGCGAACGCTTTCCAGACT
TTCTCAAAGCATAGACCAACGAATGGGATTTTCATTTCAGAGCAAACGCT
TTCTAGACTTTCAAAGCATAGACCAAAGAATAGGATTTTCGTTTCAGAGC
GAACGTTTTCTAGACTTTCAAAGCATAGACCAAAGAATGGGTTTTTCGTT
TCAGAGCGAACGCTTTCTAGACTTTCAAAGCATAGACCAAAGAATGGGAT
TTTCATTTCAGAGTGAACGCTTTCTAGACTTTCAAAGCATAGATCAAAGA
ATGGGGTTTTCATTTCAGAGTGAACGCTTTCTAGACTTTCAAAGCATAGA
CAAAGAATGGGATTTTCGTTTCAGAGCGAACGCTTTCTAGACTTTTAAAG
CATAGACAAAGAATGGGATTTTCGTTTCAGAGCGAACGCTTTCTAGACTT
TCAAAGCATAGACCAAAGAATGGGTTTTCATTTCAGAGCGAACGCTTTCT
AGACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATGGGTTTTCATTTCAGAG
CGAACGCTTTCTAGACTTTCAAAGCATAGACCAAAGAATGGGTTTTCATT
TCAGAGCGAACGCTTTCTAGACTTTCAAAGCACAGACCAAAGAATGGGAT
TTTCGTTTCAGAGCGAACGCTTTCTAGACTTTCAAAGCATAGACCAAAGA
ATGGGATTTTCGTTTCAGAGCAAACGCTTTAACAAACGAGGAAGTGAAGA
AAACATGGACATCAAACgtcaataaaattgaagatgaagtcatcaaaaaa
atcaacaaagccATTGAAATCCAATTCTTCAAAGAAATGTTGTGTAAATT
TCTTCAATTGCATGAAAATGAATGGCTTGTCCTCACAGATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008714XLOC_008714Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015618-exon-sc0000214-1491911889:338911..339263TCONS_00015618-exon-sc0000214-1491911889:338911..339263Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:338911..339263TCONS_00015618-exon-sc0000214-1510915933:338911..339263Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:338911..339263TCONS_00015618-exon-sc0000214-1575043694:338911..339263Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:339630..339858TCONS_00015618-exon-sc0000214-1491911889:339630..339858Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:339630..339858TCONS_00015618-exon-sc0000214-1510915933:339630..339858Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:339630..339858TCONS_00015618-exon-sc0000214-1575043694:339630..339858Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:346768..347024TCONS_00015618-exon-sc0000214-1491911889:346768..347024Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:346768..347024TCONS_00015618-exon-sc0000214-1510915933:346768..347024Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:346768..347024TCONS_00015618-exon-sc0000214-1575043694:346768..347024Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:347633..348135TCONS_00015618-exon-sc0000214-1491911889:347633..348135Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:347633..348135TCONS_00015618-exon-sc0000214-1510915933:347633..348135Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:347633..348135TCONS_00015618-exon-sc0000214-1575043694:347633..348135Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:348478..348647TCONS_00015618-exon-sc0000214-1491911889:348478..348647Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:348478..348647TCONS_00015618-exon-sc0000214-1510915933:348478..348647Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:348478..348647TCONS_00015618-exon-sc0000214-1575043694:348478..348647Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:350105..350286TCONS_00015618-exon-sc0000214-1491911889:350105..350286Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:350105..350286TCONS_00015618-exon-sc0000214-1510915933:350105..350286Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:350105..350286TCONS_00015618-exon-sc0000214-1575043694:350105..350286Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:350611..350762TCONS_00015618-exon-sc0000214-1491911889:350611..350762Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:350611..350762TCONS_00015618-exon-sc0000214-1510915933:350611..350762Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:350611..350762TCONS_00015618-exon-sc0000214-1575043694:350611..350762Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:351717..351955TCONS_00015618-exon-sc0000214-1491911889:351717..351955Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:351717..351955TCONS_00015618-exon-sc0000214-1510915933:351717..351955Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:351717..351955TCONS_00015618-exon-sc0000214-1575043694:351717..351955Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1491911889:353879..354054TCONS_00015618-exon-sc0000214-1491911889:353879..354054Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1510915933:353879..354054TCONS_00015618-exon-sc0000214-1510915933:353879..354054Clytia hemisphaericaexon
TCONS_00015618-exon-sc0000214-1575043694:353879..354054TCONS_00015618-exon-sc0000214-1575043694:353879..354054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:338911..354054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22721	1.55256	0.414035	1.19857	4.09736	2.1409	0	1.5018	1.56317	2.7543	2.81157	1.81312	1.72115	3.38053	2.13821	3.5255	2.93287	1.07172	0.36501	0.577448	0.792488	1.14574	1.53188	1.61648	4.60588	1.90456	1.12093	0.181107	0.599061	0.256386
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015618 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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