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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015612 ID=TCONS_00015612|Name=TCONS_00015612|organism=Clytia hemisphaerica|type=transcript|length=166bp
attttctttcgATGGTTTTTTGTTCGTTTCGTCGACGCCTTCCATCAAAC
TTTTCCAAACTTCAACAACAACACGCATGAGAATAACTCGCATCCGTCAA
TCCGTCACGTTGACGCTGTTACGTTCTTACGTTGCTCAAATCTACATATT
CCCTTCACCTTTTTCA Run BLAST on NCBI transcript from alignment at sc0000214:253215..255663+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015612 ID=TCONS_00015612|Name=TCONS_00015612|organism=Clytia hemisphaerica|type=transcript|length=2449bp|location=Sequence derived from alignment at sc0000214:253215..255663+ (Clytia hemisphaerica)
attttctttcgATGGTTTTTTGTTCGTTTCGTCGACGCCTTCCATCAAAC
TTTTCCAAGTAAgtccattgtttttttttcagaaaccAAATGAGTTGTTT
CTTGATAAACGGttatagtttttttttgattgaatgacTTCATTTTAAAA
AGCTTCAAAGTAGATTTCTGTTTGGATgtaaacccgggggggggggcagt
caggcaaattgaccgacgggtatgtgcggcggttaagggtatgtttttca
aaatatcagaaatgcactgtaagggtggacttttgataaatgcactgtaa
gggtggaaatttcagcaaatctgggaaaaattgcaaatttttttgatttt
ttttgctctaaaagaatttaaaattagaaaaaatgcaCAGTAAGGGTATG
Aaattcaccgatttttttctgcactgtaagggtgcgattctaaaagccat
ttttttcgccgcacataccgtcagttggtaaacccactgccccccccccg
ggatgtAAAACAGACATTTAGTACCCATTTTAAATGTGAAATTTACTTGA
CTTGAAaatgtttatttgttttttttataaaagcaaaatggttcgaattt
gaaaaaaaaagaatatagcgccacaaatttaatttttccttttttgatac
ATATAAAATGGCTTCTCTATGTTCTATggaaagaaagtttaaaaacgtca
attttcattgattttttgtACGTATTCTAcaaacccctgtctcacaggcT
TTTTCtcaatacactcttttttttataagaatacactttataagaatgtc
catgatgaaaatcgcccccggggggggcagccaagcaaaatgactgacgg
gtatgtgcgggcactaagggtgtatttttcaagacatccgaaatgcactg
taagggtgggttTTTTGCCGCCTGcgctgtaagggtagaaatttcagaaa
atttttgaaaaatctagatattttgaccaaaaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgttttcactgatttttgctgca
ctgtaagggtgcaattttaaaagccaatttttggcccgcacataccgtca
gtccgcaaacccagtgccccccccgggaaatcgccaaaaaactaagaata
tgctaagaatatcaccatcatggaattatgctaataaagctaagaatgcc
atttttagagcattttcaattataaactgtcaattatccccaagtaaggc
tcactccttttacaaaaatgccattttatgcttgagacgtatgtactaaa
tgttaaatctagtatgaattaggatcctaacctaagaatgttgtaagaat
attttaggatgattttcccaaaaaaagttaagaatatctatgatgaaatg
aaaaaacaccattcttataaaaaaacgtttatctaACAACAAAGACCATT
TGAGAGAGAAAAAATTGgtgtttttgggacccttagaaagacttttccca
aaaaatttgtCGATTTTTACTCCATTTTGTCCAAGTTTTTTAAAATCGTG
ACCCTTTTAGAGAGGAAATTTCTATTtgactcaatttgctttttaatgct
ttttgtACCCGGCACCCTTTTTGCCTAAATACCCCCACCCCGTATTTCAC
TTTATTtaattcattgttttaaatcatGATTTCGAATCATGGCGCCATTA
TTTTAAATCgcttttttcttttagaaggacatttaaaaaaaaaatgtttt
gttgtgatgttattcaagtttttcattcaaaacacAACCAATGATATCGA
GCCCAACAAACTTTATCTCCAATTTGTATTCTTTCAATGTCCTTTCTAGA
TTTCAACAACAACACGCATGAGAAGTCATATCCGTCATAATGACGCCGTT
TACGCCGTTACTACGTTGCTCGAATGTACGTATTCCCGTTACGTTTAACT
ACCGTCAAACTCTAACTTTTTCCAATGTGAGTGGATTATCACAATTTAAG
CTCTGATAGATCTGGTTGGTATTTCCTTCCGTTCTGGCGATATTTCGGCA
CATTTCAATACATATTGTCACTTTTTAAGGTATTGATTTTGAGTCCTACA
AACTTTATCTCCAATTTGTATTCTTTCAATGGTTTTTCTAGACTTCAACA
ACAACACGCATGAGAATAACTCGCATCCGTCAATCCGTCACGTTGACGCT
GTTACGTTCTTACGTTGCTCAAATCTACATATTCCCTTCACCTTTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015612-exon-sc0000214-1491911889:253215..253272 | TCONS_00015612-exon-sc0000214-1491911889:253215..253272 | Clytia hemisphaerica | exon |
| TCONS_00015612-exon-sc0000214-1510915933:253215..253272 | TCONS_00015612-exon-sc0000214-1510915933:253215..253272 | Clytia hemisphaerica | exon |
| TCONS_00015612-exon-sc0000214-1575043694:253215..253272 | TCONS_00015612-exon-sc0000214-1575043694:253215..253272 | Clytia hemisphaerica | exon |
| TCONS_00015612-exon-sc0000214-1491911889:255556..255663 | TCONS_00015612-exon-sc0000214-1491911889:255556..255663 | Clytia hemisphaerica | exon |
| TCONS_00015612-exon-sc0000214-1510915933:255556..255663 | TCONS_00015612-exon-sc0000214-1510915933:255556..255663 | Clytia hemisphaerica | exon |
| TCONS_00015612-exon-sc0000214-1575043694:255556..255663 | TCONS_00015612-exon-sc0000214-1575043694:255556..255663 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214 | supercontig | sc0000214:253215..255663 + |
Blast
The following BLAST results are available for this feature:
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