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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015561 ID=TCONS_00015561|Name=TCONS_00015561|organism=Clytia hemisphaerica|type=transcript|length=2623bp
ATTAACAACCCGTGAAAAGGTTACAAGGttcgaaaaatatttctaaagaa
agaatttctcaacatttttttctctcttgtgTTCACGGAATTTTGttact
ttatcaaatttattcaATCTACCCTCTATTTCCTTTATCTCAACAGGACT
AAAAAACAGAAATACAcgagaataaaaaacaaagatttggaaggaagaaa
aaaatatattggaGCTGATCATAATACGACAAAAAGTGATAATAAGTGCA
ATCATATTATTACATGGCCATGTGTTATTGTGATGTACAATTATCGATAT
TAGAAGGAATTGCCTTGGGATCGAATTAATCTATAGACAGGCTGGTTGAG
ATTCACATTATATACGTTTCAATTATCACATTGGACAAGTGAACAAAATA
CCTGCTATTAACACGAACGactcaagaaagaaaaaaaataaattgcaAAT
ATTCTCCAATATTGTCATATCTGAAGTACAACTTGTTGACTAAAGAGTGA
AAATATTAGTTGATAATCTTTATCGTTCGGAAAACTGGAAAATTACACCA
GCCGTATACACTTGAAAGCAATTCTATGACTTTTAGGCGGGAATAAAAAT
TTCGGCTCGAGATGACACAACATTTACAGATGGTGGATGATGATTATGAT
TCTGATGAACTGATGTGGGTCAAAGCCGGTGAACCCGGTGAAAAACCAAC
AATCATTCGACAAATACGATCGGAAAGTTCTAGTAGTGGATCACGTGACA
ACTCCAGCGGCTCCTCATGCGGCGGACATAACCGGAGAAATTTATTAACA
GTTGAAAACGGGACTGTGTATCGGAACGGATCGACACCTGCTACTAAAGC
TAGCAATGAATCATTGAACGCTCTCGAAAAATTAGCAAGGACATCCAGTA
ACGAGTCACGTGTTATCGTTGTTAACGTACAGGATCCTGTTTACCCAGCA
AACGTAGATCGACAACGTATACAAAGATGGAAAGAAATGCATAGTCCAAG
AACTTCAAAACGTGAAATCGTTAATTCGGACAAAAGTCCGAAAGGTAAAA
AAGTCCAGAATAATAACACAATCGAACGTTCACACTTTAACGACAACACA
CGTCATAAAGAACAAACGCAGAGACCTCTAAGTCAGCCTGCATCTCAAAC
ATATAACTGCTCTCCAAAGGTTGAAAGATGTTCAAGCGCTGACCTTAGAA
ACAGTCCTTTGAACCGTGTCACTATGATGTCGGGGAAAACTCGCGACGAA
GGTTACACGTCTTTAACAGAAGATTGCAAAGACTCCGATACAGACTCTAT
TCGTTCAAAATCACTACCGAGCACGTGGCGTCCCATAAGAGGACAAATGG
AGCATGAGGATTTGAAACGATACGCACAAACACTGACATCGAACACTTCA
ACCGATTCTAATTACTTATATCATGATGATGGTGACGAATATACATCCAA
TCATCCcgaccaaaaacttttaaatagtTCTGAGAAAAAGAAACTaaaac
gtaagcaaaaacgtagtAAATTACGACACAACGTGGAGAATGCTATTGAG
ATTTGTACATGTTTTGTTTGTTTGCGATCGGCAGTTTACCACGCTGAGGA
CGAAGATGACACAGACAGTCTAGTGGACCACCCTTGTTCTTGTGAAGAAC
CGGGCGTCAAATGTTGCGGGCGGTGGGCGGTTATTAGTCTGATGGTTTGT
TTTCTACCTTTCTTATTATGTTACCCACCCTTGAAGTCGTGTTTATGTAT
ACATGATAGAaggaaaaaagtgaagcaatCAAAGAAAGAtcagaaaaacg
aaaaaaagaaacTGACGAAACAAAATAGTGCTGATTCAGCAATGACTAAA
AGTCATAGCCCGAAACAAGCGCCTCACGAAACAGATGGAAAAGGGCTATA
AATTTTTACATAAAATCTTAATAAGATATTGTCCATATAataattaattt
atttattatttgttAGTATAAAATTCTATCACAAAGTTTTAAGTAGAAAA
GGTTTGGCATAACAAAAAAGCTAGCTAAAAGCATTATCTTGAAGAGTACG
ACAGaagatttttctttcaaaaggaaACTGCATAGAGGAACAGTAATAGG
ATTCGATTGATAAAAGATCCGAGGAAATCGTtaactttcaaattcttttg
tAGTTAGGATGAAATCGTCTTTCAAAACTTTAGTATTGAAAGTTTTAAGG
ATGACTCTAAAAATAGCTTTTCTTATTCCGGTAGTTAACTCTGACAATGT
TTCTTATAAGTATCTTTATTAACAAAGTACTAACTATAGCTTTTCGCTTA
ATTAGAGAGATCTGTAAGATCTAGAGACATAATGTCCCGAAACTGATAAG
GAAAGTCTTGGCGCGTCCAGGCGTCTTTAAAATGAGCCTGAAATAGATTT
GCGAGAGATTTCTTCCGGGATCCTCTttgaattttagcttgaaaagtATG
CATTATAACaatattatttttgaaacttttagtGTTTCTGTGAAATCCCA
TTTGCTTTTGTATACTACTGATCATAATTTTGTAAATATGTTGCGAGAAG
TATGAAAAGTGCGCTTAGAAAATACtttattaaaatgaaaaagagaACTT
TTTGAAACATACACATGAATGCA Run BLAST on NCBI protein sequence of TCONS_00015561-protein >TCONS_00015561-protein ID=TCONS_00015561-protein|Name=TCONS_00015561-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
MTQHLQMVDDDYDSDELMWVKAGEPGEKPTIIRQIRSESSSSGSRDNSSG
SSCGGHNRRNLLTVENGTVYRNGSTPATKASNESLNALEKLARTSSNESR
VIVVNVQDPVYPANVDRQRIQRWKEMHSPRTSKREIVNSDKSPKGKKVQN
NNTIERSHFNDNTRHKEQTQRPLSQPASQTYNCSPKVERCSSADLRNSPL
NRVTMMSGKTRDEGYTSLTEDCKDSDTDSIRSKSLPSTWRPIRGQMEHED
LKRYAQTLTSNTSTDSNYLYHDDGDEYTSNHPDQKLLNSSEKKKLKRKQK
RSKLRHNVENAIEICTCFVCLRSAVYHAEDEDDTDSLVDHPCSCEEPGVK
CCGRWAVISLMVCFLPFLLCYPPLKSCLCIHDRRKKVKQSKKDQKNEKKK
LTKQNSADSAMTKSHSPKQAPHETDGKGL Run BLAST on NCBI transcript from alignment at sc0000212:86200..88822 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015561 ID=TCONS_00015561|Name=TCONS_00015561|organism=Clytia hemisphaerica|type=transcript|length=2623bp|location=Sequence derived from alignment at sc0000212:86200..88822 (Clytia hemisphaerica)
TGCATTCATGTGTATGTTTCAAAAAGTtctctttttcattttaataaaGT
ATTTTCTAAGCGCACTTTTCATACTTCTCGCAACATATTTACAAAATTAT
GATCAGTAGTATACAAAAGCAAATGGGATTTCACAGAAACactaaaagtt
tcaaaaataatattGTTATAATGCATacttttcaagctaaaattcaaAGA
GGATCCCGGAAGAAATCTCTCGCAAATCTATTTCAGGCTCATTTTAAAGA
CGCCTGGACGCGCCAAGACTTTCCTTATCAGTTTCGGGACATTATGTCTC
TAGATCTTACAGATCTCTCTAATTAAGCGAAAAGCTATAGTTAGTACTTT
GTTAATAAAGATACTTATAAGAAACATTGTCAGAGTTAACTACCGGAATA
AGAAAAGCTATTTTTAGAGTCATCCTTAAAACTTTCAATACTAAAGTTTT
GAAAGACGATTTCATCCTAACTacaaaagaatttgaaagttaACGATTTC
CTCGGATCTTTTATCAATCGAATCCTATTACTGTTCCTCTATGCAGTttc
cttttgaaagaaaaatcttCTGTCGTACTCTTCAAGATAATGCTTTTAGC
TAGCTTTTTTGTTATGCCAAACCTTTTCTACTTAAAACTTTGTGATAGAA
TTTTATACTaacaaataataaataaattaattatTATATGGACAATATCT
TATTAAGATTTTATGTAAAAATTTATAGCCCTTTTCCATCTGTTTCGTGA
GGCGCTTGTTTCGGGCTATGACTTTTAGTCATTGCTGAATCAGCACTATT
TTGTTTCGTCAgtttctttttttcgtttttctgaTCTTTCTTTGattgct
tcacttttttcctTCTATCATGTATACATAAACACGACTTCAAGGGTGGG
TAACATAATAAGAAAGGTAGAAAACAAACCATCAGACTAATAACCGCCCA
CCGCCCGCAACATTTGACGCCCGGTTCTTCACAAGAACAAGGGTGGTCCA
CTAGACTGTCTGTGTCATCTTCGTCCTCAGCGTGGTAAACTGCCGATCGC
AAACAAACAAAACATGTACAAATCTCAATAGCATTCTCCACGTTGTGTCG
TAATTTactacgtttttgcttacgttttAGTTTCTTTTTCTCAGAactat
ttaaaagtttttggtcgGGATGATTGGATGTATATTCGTCACCATCATCA
TGATATAAGTAATTAGAATCGGTTGAAGTGTTCGATGTCAGTGTTTGTGC
GTATCGTTTCAAATCCTCATGCTCCATTTGTCCTCTTATGGGACGCCACG
TGCTCGGTAGTGATTTTGAACGAATAGAGTCTGTATCGGAGTCTTTGCAA
TCTTCTGTTAAAGACGTGTAACCTTCGTCGCGAGTTTTCCCCGACATCAT
AGTGACACGGTTCAAAGGACTGTTTCTAAGGTCAGCGCTTGAACATCTTT
CAACCTTTGGAGAGCAGTTATATGTTTGAGATGCAGGCTGACTTAGAGGT
CTCTGCGTTTGTTCTTTATGACGTGTGTTGTCGTTAAAGTGTGAACGTTC
GATTGTGTTATTATTCTGGACTTTTTTACCTTTCGGACTTTTGTCCGAAT
TAACGATTTCACGTTTTGAAGTTCTTGGACTATGCATTTCTTTCCATCTT
TGTATACGTTGTCGATCTACGTTTGCTGGGTAAACAGGATCCTGTACGTT
AACAACGATAACACGTGACTCGTTACTGGATGTCCTTGCTAATTTTTCGA
GAGCGTTCAATGATTCATTGCTAGCTTTAGTAGCAGGTGTCGATCCGTTC
CGATACACAGTCCCGTTTTCAACTGTTAATAAATTTCTCCGGTTATGTCC
GCCGCATGAGGAGCCGCTGGAGTTGTCACGTGATCCACTACTAGAACTTT
CCGATCGTATTTGTCGAATGATTGTTGGTTTTTCACCGGGTTCACCGGCT
TTGACCCACATCAGTTCATCAGAATCATAATCATCATCCACCATCTGTAA
ATGTTGTGTCATCTCGAGCCGAAATTTTTATTCCCGCCTAAAAGTCATAG
AATTGCTTTCAAGTGTATACGGCTGGTGTAATTTTCCAGTTTTCCGAACG
ATAAAGATTATCAACTAATATTTTCACTCTTTAGTCAACAAGTTGTACTT
CAGATATGACAATATTGGAGAATATTtgcaatttattttttttctttctt
gagtCGTTCGTGTTAATAGCAGGTATTTTGTTCACTTGTCCAATGTGATA
ATTGAAACGTATATAATGTGAATCTCAACCAGCCTGTCTATAGATTAATT
CGATCCCAAGGCAATTCCTTCTAATATCGATAATTGTACATCACAATAAC
ACATGGCCATGTAATAATATGATTGCACTTATTATCACTTTTTGTCGTAT
TATGATCAGCtccaatatatttttttcttccttccaaatctttgtttttt
attctcgTGTATTTCTGTTTTTTAGTCCTGTTGAGATAAAGGAAATAGAG
GGTAGATtgaataaatttgataaagtaaCAAAATTCCGTGAAcacaagag
agaaaaaaatgttgagaaattctttctttagaaatatttttcgaaCCTTG
TAACCTTTTCACGGGTTGTTAAT Coding sequence (CDS) from alignment at sc0000212:86200..88822 >TCONS_00015561 ID=TCONS_00015561|Name=TCONS_00015561|organism=Clytia hemisphaerica|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000212:86200..88822 (Clytia hemisphaerica)
TTATAGCCCTTTTCCATCTGTTTCGTGAGGCGCTTGTTTCGGGCTATGAC
TTTTAGTCATTGCTGAATCAGCACTATTTTGTTTCGTCAgtttctttttt
tcgtttttctgaTCTTTCTTTGattgcttcacttttttcctTCTATCATG
TATACATAAACACGACTTCAAGGGTGGGTAACATAATAAGAAAGGTAGAA
AACAAACCATCAGACTAATAACCGCCCACCGCCCGCAACATTTGACGCCC
GGTTCTTCACAAGAACAAGGGTGGTCCACTAGACTGTCTGTGTCATCTTC
GTCCTCAGCGTGGTAAACTGCCGATCGCAAACAAACAAAACATGTACAAA
TCTCAATAGCATTCTCCACGTTGTGTCGTAATTTactacgtttttgctta
cgttttAGTTTCTTTTTCTCAGAactatttaaaagtttttggtcgGGATG
ATTGGATGTATATTCGTCACCATCATCATGATATAAGTAATTAGAATCGG
TTGAAGTGTTCGATGTCAGTGTTTGTGCGTATCGTTTCAAATCCTCATGC
TCCATTTGTCCTCTTATGGGACGCCACGTGCTCGGTAGTGATTTTGAACG
AATAGAGTCTGTATCGGAGTCTTTGCAATCTTCTGTTAAAGACGTGTAAC
CTTCGTCGCGAGTTTTCCCCGACATCATAGTGACACGGTTCAAAGGACTG
TTTCTAAGGTCAGCGCTTGAACATCTTTCAACCTTTGGAGAGCAGTTATA
TGTTTGAGATGCAGGCTGACTTAGAGGTCTCTGCGTTTGTTCTTTATGAC
GTGTGTTGTCGTTAAAGTGTGAACGTTCGATTGTGTTATTATTCTGGACT
TTTTTACCTTTCGGACTTTTGTCCGAATTAACGATTTCACGTTTTGAAGT
TCTTGGACTATGCATTTCTTTCCATCTTTGTATACGTTGTCGATCTACGT
TTGCTGGGTAAACAGGATCCTGTACGTTAACAACGATAACACGTGACTCG
TTACTGGATGTCCTTGCTAATTTTTCGAGAGCGTTCAATGATTCATTGCT
AGCTTTAGTAGCAGGTGTCGATCCGTTCCGATACACAGTCCCGTTTTCAA
CTGTTAATAAATTTCTCCGGTTATGTCCGCCGCATGAGGAGCCGCTGGAG
TTGTCACGTGATCCACTACTAGAACTTTCCGATCGTATTTGTCGAATGAT
TGTTGGTTTTTCACCGGGTTCACCGGCTTTGACCCACATCAGTTCATCAG
AATCATAATCATCATCCACCATCTGTAAATGTTGTGTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015561-exon-sc0000212-1491911889:86200..88822 | TCONS_00015561-exon-sc0000212-1491911889:86200..88822 | Clytia hemisphaerica | exon |
| TCONS_00015561-exon-sc0000212-1510915933:86200..88822 | TCONS_00015561-exon-sc0000212-1510915933:86200..88822 | Clytia hemisphaerica | exon |
| TCONS_00015561-exon-sc0000212-1575043694:86200..88822 | TCONS_00015561-exon-sc0000212-1575043694:86200..88822 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212 | supercontig | sc0000212:86200..88822 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007875 | Sprouty |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007275 | multicellular organism development |
| GO:0009966 | regulation of signal transduction |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007275 |
multicellular organism development |
| biological_process |
GO:0009966 |
regulation of signal transduction |
| cellular_component |
GO:0016020 |
membrane |
Blast
The following BLAST results are available for this feature:
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