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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015559 ID=TCONS_00015559|Name=TCONS_00015559|organism=Clytia hemisphaerica|type=transcript|length=1074bp
ttatgacctttattgtggaaattgtggatctgttcgaactgttagctgga
aattaagtttctgttcttaaaagtccttcaatgtcgagctggaatttagc
gatctgttcttataagattttgtcagccctggtagataaggAACAGTTCA
GTATCGCTTTTTTTTGTATTACGGAAAACGCGAATTAGAGCTACGCTTTC
GtgttttcactttcgattttgccTAATTTCATAGCAAACCCATAGCAACG
AGGTGCACAGGCATAGTTACGAGTGACTGCGCAAAAATTCCAACATAAGA
TTGATTTTAAAACTGTTTCGTTAGATAAAGCATTTAAAAATACACCTTCT
CTATgctggatttttttctcaagttAATAAATCTCAAGATATTGTTCAAA
AGATTTCCCCTTATTTCACAGATAAGAAAAAGTAAAGCTTACTATACTAA
CGCGAGCGCTCAAAATGAAGAATCACGTGACATTTTACTCGTTAATTAGA
TTGTGCGTATACGTCAATAATAAAATAAGAAGTTCGTGAGGAATTACTGG
CTGATTGGAATAATTTCACAGTTTATAATTCATTAAAGGAGATCTAAcgg
caaaaatttcttcatccttattttttgacaaaGTACAGGcctaattaaat
aaaaaacattgcaaaaagaACGAGTGCAAAATCTTTCATATTGATTGAAT
TATCATTGTTTAAAATATGTCTTTATTTGAAAGTAAGAGGGTTTCGTGAC
GTCAGCGCTGAACTTTCATTTCGATAGAGAAACTGTTTGTAGACAAAAAT
TATGGAAAGAAGATGTTTTAtagcaaaatataattttgatgtacGTAGAA
TGTAGAAGTAGTAGAATGGTTAAAAATGTctgagaaatcattttcttcaC
TTGAAGATTCACTCGACGACATTTTGCTCTGAATCTAGAAGTCTAAATGA
ATGTGCTAAATGattttatcaagaaatttttctttataaaactcACTAAA
AgtttagagaaaaagagaaaaaatcttGTTTAACAAACAAGTTGTTCAGC
AATGACGTCACACGCTTAAATCTT Run BLAST on NCBI transcript from alignment at sc0000212:41553..42626 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015559 ID=TCONS_00015559|Name=TCONS_00015559|organism=Clytia hemisphaerica|type=transcript|length=1074bp|location=Sequence derived from alignment at sc0000212:41553..42626 (Clytia hemisphaerica)
AAGATTTAAGCGTGTGACGTCATTGCTGAACAACTTGTTTGTTAAACaag
attttttctctttttctctaaacTTTTAGTgagttttataaagaaaaatt
tcttgataaaatCATTTAGCACATTCATTTAGACTTCTAGATTCAGAGCA
AAATGTCGTCGAGTGAATCTTCAAGtgaagaaaatgatttctcagACATT
TTTAACCATTCTACTACTTCTACATTCTACgtacatcaaaattatatttt
gctaTAAAACATCTTCTTTCCATAATTTTTGTCTACAAACAGTTTCTCTA
TCGAAATGAAAGTTCAGCGCTGACGTCACGAAACCCTCTTACTTTCAAAT
AAAGACATATTTTAAACAATGATAATTCAATCAATATGAAAGATTTTGCA
CTCGTtctttttgcaatgttttttatttaattaggCCTGTACtttgtcaa
aaaataaggatgaagaaatttttgccgTTAGATCTCCTTTAATGAATTAT
AAACTGTGAAATTATTCCAATCAGCCAGTAATTCCTCACGAACTTCTTAT
TTTATTATTGACGTATACGCACAATCTAATTAACGAGTAAAATGTCACGT
GATTCTTCATTTTGAGCGCTCGCGTTAGTATAGTAAGCTTTACTTTTTCT
TATCTGTGAAATAAGGGGAAATCTTTTGAACAATATCTTGAGATTTATTa
acttgagaaaaaaatccagcATAGAGAAGGTGTATTTTTAAATGCTTTAT
CTAACGAAACAGTTTTAAAATCAATCTTATGTTGGAATTTTTGCGCAGTC
ACTCGTAACTATGCCTGTGCACCTCGTTGCTATGGGTTTGCTATGAAATT
AggcaaaatcgaaagtgaaaacaCGAAAGCGTAGCTCTAATTCGCGTTTT
CCGTAATACAAAAAAAAGCGATACTGAACTGTTccttatctaccagggct
gacaaaatcttataagaacagatcgctaaattccagctcgacattgaagg
acttttaagaacagaaacttaatttccagctaacagttcgaacagatcca
caatttccacaataaaggtcataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015559-exon-sc0000212-1491911889:41553..42626 | TCONS_00015559-exon-sc0000212-1491911889:41553..42626 | Clytia hemisphaerica | exon |
| TCONS_00015559-exon-sc0000212-1510915933:41553..42626 | TCONS_00015559-exon-sc0000212-1510915933:41553..42626 | Clytia hemisphaerica | exon |
| TCONS_00015559-exon-sc0000212-1575043694:41553..42626 | TCONS_00015559-exon-sc0000212-1575043694:41553..42626 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212 | supercontig | sc0000212:41553..42626 . |
Blast
The following BLAST results are available for this feature:
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