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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015331 ID=TCONS_00015331|Name=TCONS_00015331|organism=Clytia hemisphaerica|type=transcript|length=1665bp
tcagaaaCATAGACTTGTAAATATATTGTACAtagtaaagaaaaaaaaca
aaaaatggtagACTCAAGTAGTGACAataaaattcttggaaaattaTCAT
CAGCAGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAAGATGGG
TACATGAACTGTTGCGGATGCAAAGGACAGGCTTATAACCCAACTGATGT
CGAACAAAAAGCAAACATTATCACACACGGGATCAACATCCCTTTTGCAG
TTGTTGCTGTTTACTTCATGGTTATCAAATCGAAAGACAATTTAGACTTG
GTCTGTACGTTGGTGTATGGCACGAGTCTTTTGATGTTATTCACCGTCTC
TACACTCTTCCACGTCATCTCTTTGCTACCGAAGTGGAGgGAGAGTAGGT
TACGAAAGATATTTCATTTGTGTGATCGATTCTCCATTTACATCTTCATA
TCTGCTTCTTACATGCCATGGTTGCTTCTTCAGCGGACGATCCCGAACGC
GCATGACATCGTGACTTTGTTGTGGTCCATTGCTGCCATGGGGATAGTAT
ACTCGTTAGTCATGCATGAAAAGTACAAAATGCTAGAGACAGCCATTTAT
TTGTGTCAAGGATTCGGACCCGCCATCTTTCTCATTAAACACGCATCCAC
AAGTTTATTCGAATTGGCGTTGGGCGGTTTGCTTTACGTCATTGGAGTAA
TTTTCTTCAAATCGGACGGTCACCTCCCTTTCGCGCATGCGATCTGGCAC
ATCTTGGGTTCCATCGCAGCTTGGGTACATCATTATGGAATTTGGATGTA
TTTTTATGCAGGCtgaaaagcgatttttgatACGGTATTTTTGACCTCTT
AAAATTCCGCATTCCATTATATTGTATTGTCCAACATTGTAGCCAgttta
acttaaattctttttggacctactacggaggtcctttaaattaactgatg
ttcttccatccgtccgttcgttcgtctgttaccagcttttctcgggattg
gctttatatatttttctggttttttcGCACAGTAATGTAAAATCgtaatt
tttataatctgatggagcccgattttcaaaaaataatttttttggccaaa
ttttgaccaaaagtccctaaaaatggggttttttggactttgtgtgaaat
tgcttcattagttttttctaggcaaggttctctaaaaagtcaCTCAAGCC
GTTTTTTCCGGAAAATCTTTTAGTGATATAAAAtggtaatttttaatttc
tgatggagcccgattttcgaaaaataatttttgggcaaatttgggccgaa
ttcggatactcacggtaatctattcaagctgctcactacacttttttact
ctcttgctataTGTCCTAttttatctgattctcatcatcaggtaggtcca
ttcagcatgttgcttgttaattCATATATTTTAATATTGTAGAAATTTTT
CTGTTTGTAAATTATGCTGAATTTCATTacggttttgttttttaattctt
ttttattgaattttttaagttaatttttttataatttcatttttaacttt
CGTATGCTGCGTTGGTATCTTGGGATGGAAAGCTACCCGGTAATGCATCG
ACACAAGATGTTTTCCAATATACTCAAAACCGTACTTCATTtcgaaatga
tgaaaataatcgctt Run BLAST on NCBI protein sequence of TCONS_00015331-protein >TCONS_00015331-protein ID=TCONS_00015331-protein|Name=TCONS_00015331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MVDSSSDNKILGKLSSAGWICDQRKEQWRKDGYMNCCGCKGQAYNPTDVE
QKANIITHGINIPFAVVAVYFMVIKSKDNLDLVCTLVYGTSLLMLFTVST
LFHVISLLPKWRESRLRKIFHLCDRFSIYIFISASYMPWLLLQRTIPNAH
DIVTLLWSIAAMGIVYSLVMHEKYKMLETAIYLCQGFGPAIFLIKHASTS
LFELALGGLLYVIGVIFFKSDGHLPFAHAIWHILGSIAAWVHHYGIWMYF
YAG Run BLAST on NCBI transcript from alignment at sc0000210:393114..401108+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015331 ID=TCONS_00015331|Name=TCONS_00015331|organism=Clytia hemisphaerica|type=transcript|length=7995bp|location=Sequence derived from alignment at sc0000210:393114..401108+ (Clytia hemisphaerica)
tcagaaaCATAGACTTGTAAATATATTGTACAtagtaaagaaaaaaaaca
aaaaatggtagACTCAAGTAGTGACAataaaattcttggaaaattaTCAT
CAGCAGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAAGATGGG
TGAGCAATCTTTTTCTGTAGACAtgactttattattattataattattaG
TTATTATCATTTTTCTAAATACCACTTTAATCagctttaatgggataaaa
tttcgcgaggattaaattttgcggatttcatGGATTTGAGTGTCAACTGC
GAAATTATGTGCCAATGGAATATGGAAAGTCCTCATCCGCGaaatctttt
taaacaaaactcaaataaactactggcatcaaagaagcgctaataatgca
tATTTTAAGGAGCaaacatgcatgatttggcagtaaagcaacaaaatagt
gaaaatatttGTACCATCCATGAaataagtccccgcgaaatcttaaaaac
atgatttttcagctttttcaatCCCCCCATCAAAAAGGTCAAATCCCTCC
ATCAGCCTTATCCCCTCCATGACCAAAATGGGGACTTTGGTACCCATTAT
AGGTTATTGTCATTATCACTTTATTTTCTCAAGAAACGGCATTGTAAATA
AATTAGCTCGTAGTTACGTAGAGGAATCTTGCTTTTTACATGTGAGAATC
AAAAGTAAAACTAAACTTTCCAGtatgtaaaaatatttaacaatggttGA
AAATACTTAATACACAAaaattaaccccccccccccccctaaatcccccc
ccccccccccaaaattttccccccccccccccccaaaattttcccccccc
ccccccccaaaattttccccccccccccccccaaaattttcccccccccc
ccccccaaaattttccccccccccccccccctaaatctCTCCGCCCCATC
AGCCTTAGCCCCCCcccaacatttgaaaaataaaaaatatctgCCCATCA
TACATTTGACGAAATTCTAAACCCCCACCCAATTTTATGAGGGGGGGTGA
AGTCATGTTAAAGTTTTGCGGATGAGCTCAACTgagaaatttaatccccg
caaaaatttATTGGTTGACATTCCAGTCTTTACATGTTATTTATTAATAC
AGCCAAGCCCTAGTTAGGAGGACACAATCACTGGCTAAGTGGTATCTTAG
GACCATAGTgtggaaaggggtctgatcccccttcttggcatctccccatc
ctttaaaaatgcctatcccccaaggatcttggacaaaaatagctatatat
gtgaaatatctttagagagagaaagcgaaataattccttcttctttttga
ctcagactactctataagaaaacttcctttcatgaagacaaaatttcata
acagtgcttgaaaataatacaataaatatgtaagccccccccttccctgc
ccccccccccccctttttttaatgaaaatttctgatcccccttCATTTTT
TTCGGAAGGTGTCACCCCTCTTTAGAAAGGGGGGTCTCCTCATTCCAATG
AATTCGTTCAAAATGATGTGGTTATTATTATCATTGCTTGTATTCTTATT
CACATTTGTTTGACTCTTGATTTTTGTCACCACACTGCATAATCTGGTGC
CCTGCCTTTCTTATCTTGCGTACTAAAcgattgtattttttactgtacTG
ACGATGACGATAGTCGAAAAGCTTTTACaataaattgaacaaatttttgt
tttcttgatttttatcgaaCATAAACGATTAACATATTAGAAAATAAGCT
AAAAAAATTTGAAGGGACAAATTGTATACAAACTGATTTCATCCCGTAAT
AAaatatcgtattatcatatagcaaccatattactgtattacacgagATT
ACAAATGAGTGCAGCCTATTCTGCTTTTGGATTCTTTATTGACTTCTATT
CTTTCTTCAGGTACATGAACTGTTGCGGATGCAAAGGACAGGCTTATAAC
CCAACTGATGTCGAACAAAAAGCAAACATTATCACACACGGGGTATTGCA
AAAACTATGATTTCTTTTTAGCAGCCCCTTGCAGCTTTTGCTCCTTATTC
ATAGATATACTttaagcgtacaaactttcgcgaacagaaattttcgcgag
atcgaaaaatcgcgaaattcacgacatttacttacgcgaatttcaggaaa
aaatattttttaagagcACAAACTTTGTAaacgttggataaaaatgagaa
tttttaaaccaaaatttgataaaacgTGACAAATGTTCCTTGAATCCGAT
AAAAACCAGTAAAAACGGTTGTAAAGAAATATGCTgaaaattttataaag
ttttatagattttcaattttttaaagaaaatttcgcggcgagcataaact
tttgcgaatcaCCCTATTAAGAGATTTCAAAGACtttaactttcgcgaaa
aaggccaaaattcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgt
acgcctactTAAAGTAATAGGTTTTGAACGGGTGTAAGAATCAAGCTACA
GTACTAACATTGACAAAAAATGGAAGAAGTTGATCTGTAGAGAGATCGGG
CTAGATCTCCCTAACTCTCaggtttattttaatttttcctagcTCTCAGT
TTTCTTAATATGTTGTTTCTACAATCGGTGACGAAATACTTGCCACAAAA
AGGAAATCCACCGgagtgttttgaaaccacaatcgatttgcaagtgctct
aacgtaggttcgaagggtagagttttaactctgagttttaacaggacctt
aggatctgaggatccaaaggttcaaaaatggtccagtaggtcttgaaata
tagcctagaaaccaataaatccctcccagatcgaaataatcgttgaaatc
aagttgaagcccgaaattgacattctcgctcgaacttcaattttcgaaaa
atggtaaattagccaaaagtgccaatatgttatggcactgattgtaggtT
TCTTACTTTAAAAACTACTATTATAAGGTTATTAAAATTGTTCATTTTGC
AAAGAATTTTTTGCGCAGAAGTACTCCAAGCAGCTCCAAGATATGTAGAT
TGAAATTCGAAGCAGTGCTAATATTTATGTCAACCCTGTAACGTCACATA
GCCGCTTTCTCTAAGTGCTGACGAAGAAAGAACAAAATTTAATACTCATA
GCCACTCCACACAAGCCACTCCACACAAGCCACTCCACACAAGCCACTCC
ACACAAGCCACTCCACACAAGCCACTCCACACAAGCCACTCCACACAAGC
CACAAGCCAAAAGCTTTCCAAAACGATATAACACTGCTAGTTCGCTGTAT
CTCAGAGTACTTCTGTGGAAAGAAATCTTCCCAAAACTCTTCAAAAAATG
CACTATACCGGGTGTCTCTGTAAAAACTTtcccctgtttgattcaaaatt
gcgaaaaagtgaaaaacatatattagcttgattttttcgaaatcgtttag
aggagggtttaacttaaattttggtatatcaaactttaaagttgcttcat
tagatcaaaagttatgaaaaaaaaagagtaaaaaaattgttttcaaaaag
aacgcaaaaagacgaaaaaacaaGGTATCAAATTAGACAAGAAAACACTG
TACAGACAgtaaagttttacttttgaacTCGACTGtgcatcttttttgtt
ttattattcgtttttaataattttaattGCTAATTTAGAGCTCCTTTTGG
ATTCATTAATGAGCATGAAGTTTCAACAAGCaacaaacttttatcaaaat
ttttccaaaagtttccAAAGCTTAGCGAGTCTATTTGAGTGGAGAAGAGA
AAGTTTGAGTGTCCTTTTTTCTAACAAAAGATTTGATACCCtattttttc
gtctttttgcgctctttttgaaaaaattttgtttactctttttgtcataa
cttttgatataatgaagcaattttaaagtttgatatatcaaaatttaagt
taaaccctcctctaaacgatttcgaaaaaatcaagctaatatattttttc
actttttcgcaattttgaatcaaacaggggggGTAGTTTTTTTAGAGACA
CCCGGTATAATGAAATTCGACCAgcagttttattttattttaacaatata
ccttattacacgaatattactaggcaagtattcaacggccttgaaattaa
cactccAAAAATTAACATGAATTTTATCTgatttttcaaggacaccatgg
ctggttttaattaagggagtttttattaacacgaaatttttcaattcgtg
ttaataaaatgactagtaatattcgtgtaataataTATATCGAGTTCTCA
TTGTCTTGTTTACTTTATCTTTAACAAGCCTACTATTTTATGATTAATCC
CCGAACAAAGGAAGGTCTGTAATTTGTGCTCAATTTCTTCGTTCTAGATC
AACATCCCTTTTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAATCGAA
AGACAATTTAGACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTTTTGA
TGTTATTCACCGTCTCTACACTCTTCCACGTCATCTCTTTGCTACCGAAG
TGGAGGTATTAGActcttgtttttcatttttttgtccaCCTTTTTATTAA
AAGTTGCATTTGGGGGGTGTGCTTTGATTTAACTAGGGTATTCTCAGGCG
CCTGATAAACGGTGGTCGGAATAAAAATAAGGTTATTACAGACTAAAACC
TGGCTTTTTGGAACAAAACATGAAACCCAAGCGGCGTAAATGCCCAGTAG
TGTTGTTAGTGTcaacatatttttcaatttgCAGAATCGCCATACAACTT
AATTTGCAGGAGTGAATTTTTTCGATAGCGCAAATCGAGTCGGAAGagca
ataaaaaattaattgctttaatttttttgagataAGTATCTCTaacagtt
tgaaaaagaaagattttaccATTATCACTCGGAGGTATTAATTATATGTA
GTTTTTTTTTACCCATGTGCCCAATAGTTAGTCAGATAACCCGATTTTTA
GTCTGGACTCGTCATTGAAAATTGCGCGCAGGCCCCGTCAAAATCTTTTC
GACCAGTTGTGTTTTAAAGGCCCATTCCGCTGGGCCAATAAGGGATCCTT
TTTTTGATagcactgaaaatattttcaaaaatttaataaacggcgggggt
cctaataaggtccgggggttaCGAACAAAATCGATAAATTAACAAATAGG
GGGTCCCCTTTATTAAGCACCTGAAAATTAATTAGGGACAAATTCTGAGA
TACCAActtgtatagaccttttcatgaattacttcacggtcacgaacatc
acttgcctcgtattaaagcaattaccatggtgattatgtcccttgagaca
ttaaatgattttttttttaatagaaagtagttttagtAAAATCCGCTgtg
agttaatcaccatggctataatttcaaaacgaggcaagtaatgttcgtaa
cgtaatttatgaaaaagttctATTTTGCTACGTTTGCTTTTTGAATGTAA
TTCGGGAATATCTGTTGCAAAAATGAAGGTTACCTTATACACCTAACCAC
CTAACACTTTTCTTATGAGTTATGTCGGGTCAAACTTTTTCAGAAGGCCT
GAGTTGAGGGAACTTATTTTTagcaaattttgagatttttaacaaaattc
gCCCTGATTCAtccttgatttttttctattacaCCTCTTTTTAGGCCAAA
AGAACCAATTTAAACTACCATTCGCCAAAGTTTTTACTGTCTTCAAACTA
AATGATAAgttctgtttatttttgttgttgtttaggGAGAGTAGGTTACG
AAAGATATTTCATTTGTGTGATCGATTCTCCATTTACATCTTCATATCTG
CTTCTTACATGCCATGGTAAGTGTGACCAGCTCATTCCTTTCTCACAGCT
TCTTACATGCCATGGTAAGTGTGACCAGCTCATTCCTTTCTCACAGCTTC
TTACATGCCATGGTAAGTGTGACCAGCTCATTCTCTTCTCCCAGCCAATC
AGCACTCTAAGATTTTCCACGCTAGCGTTTCTAGATTGTTTATTGCTTTC
AGAAAACTTTCCCTTTCTGACTATGGTTAGCCAAAAATGCTAGATGGGGT
TGAGGCCATAGCTAAGTAAACTTTATGGAATCTGTTAAGAAAGAAAACGA
TTTTTTCTCTTTGCCATGTCTTGGTGTCCAATATGTGGGGTTTACCCTCA
GACTAAAAGGGTGTGTGTTCAAAACCAACCAGTTTCACAGTTGTGAGGTC
CTCTCTCGCCCACACTGAGTATCTGGCATTGTTTTGTAGGTTGCTTCTTC
AGCGGACGATCCCGAACGCGCATGACATCGTGACTTTGTTGTGGTCCATT
GCTGCCATGGGGATAGTATACTCGTTAGTCATGCATGAAAAGTATACCAT
TTTGTTTTCCTTTGTCTTGTTAAGAATACACTCCCGAATATGTTTCCAAC
TAGCAATAAATTGTTAAAAGCGTTGGAAATATTTCATCCATCTGTTTTAT
CTTGTAGGTGTTATTGGGTCTTCCCAGAGTTCAAAATTGTAAATGTAGAT
TCGGGGTGGGCTTTGTAGAACAATCTTGGGACGACCATAAGTTTTTGCAC
AACTGTATGTGAACATCGCTATGTTTTTACAAATTCATTGTCAACTATGA
AAACGATACGTTAGGTAATTTAAACATCTgtgagtttgtttttttatcca
TCAAAGAACGATTTGATTAATATGCTACTTTTTCTTTATCCGTAGGTACA
AAATGCTAGAGACAGCCATTTATTTGTGTCAAGGATTCGGACCCGCCATC
TTTCTCATTAAACACGTAAGTCCATTTCTTATTTGTACCCTCCTCACCAC
AGTGTTTCGAAACCATTTCGTTTCGGAGTCTGAACATCGTCTAAGTGTTA
CTGGTCCACTCTCTTTTTTTAGGCATCCACAAGTTTATTCGAATTGGCGT
TGGGCGGTTTGCTTTACGTCATTGGAGTAATTTTCTTCAAATCGGACGGT
CACCTCCCTTTCGCGCATGCGATCTGGCACATCTTGGGTTCCATCGCAGC
TTGGGTACATCATTATGGAATTTGGATGTATTTTTATGCAGGCtgaaaag
cgatttttgatACGGTATTTTTGACCTCTTAAAATTCCGCATTCCATTAT
ATTGTATTGTCCAACATTGTAGCCAgtttaacttaaattctttttggacc
tactacggaggtcctttaaattaactgatgttcttccatccgtccgttcg
ttcgtctgttaccagcttttctcgggattggctttatatatttttctggt
tttttcGCACAGTAATGTAAAATCgtaatttttataatctgatggagccc
gattttcaaaaaataatttttttggccaaattttgaccaaaagtccctaa
aaatggggttttttggactttgtgtgaaattgcttcattagttttttcta
ggcaaggttctctaaaaagtcaCTCAAGCCGTTTTTTCCGGAAAATCTTT
TAGTGATATAAAAtggtaatttttaatttctgatggagcccgattttcga
aaaataatttttgggcaaatttgggccgaattcggatactcacggtaatc
tattcaagctgctcactacacttttttactctcttgctataTGTCCTAtt
ttatctgattctcatcatcaggtaggtccattcagcatgttgcttgttaa
ttCATATATTTTAATATTGTAGAAATTTTTCTGTTTGTAAATTATGCTGA
ATTTCATTacggttttgttttttaattcttttttattgaattttttaagt
taatttttttataatttcatttttaactttCGTATGCTGCGTTGGTATCT
TGGGATGGAAAGCTACCCGGTAATGCATCGACACAAGATGTTTTCCAATA
TACTCAAAACCGTACTTCATTtcgaaatgatgaaaataatcgctt Coding sequence (CDS) from alignment at sc0000210:393114..401108+ >TCONS_00015331 ID=TCONS_00015331|Name=TCONS_00015331|organism=Clytia hemisphaerica|type=CDS|length=5334bp|location=Sequence derived from alignment at sc0000210:393114..401108+ (Clytia hemisphaerica)
atggtagACTCAAGTAGTGACAataaaattcttggaaaattaTCATCAGC
AGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAAGATGGGTACA
TGAACTGTTGCGGATGCAAAGGACAGGCTTATAACCCAACTGATGTCGAA
CAAAAAGCAAACATTATCACACACGGGATCAACATCCCTTTTGCAGTTGT
TGCTGTTTACTTCATGGTTATCAAATCGAAAGACAATTTAGACTTGGTCT
GTACGTTGGTGTATGGCACGAGTCTTTTGATGTTATTCACCGTCTCTACA
CTCTTCCACGTCATCTCTTTGCTACCGAAGTGGAGgGAGAGTAGGTTACG
AAAGATATTTCATTTGTGTGATCGATTCTCCATTTACATCTTCATATCTG
CTTCTTACATGCCATGGTTGCTTCTTCAGCGGACGATCCCGAACGCGCAT
GACATCGTGACTTTGTTGTGGTCCATTGCTGCCATGGGGATAGTATACTC
GTTAGTCATGCATGAAAAGTACAAAATGCTAGAGACAGCCATTTATTTGT
GTCAAGGATTCGGACCCGCCATCTTTCTCATTAAACACGCATCCACAAGT
TTATTCGAATTGGCGTTGGGCGGTTTGCTTTACGTCATTGGAGTAATTTT
CTTCAAATCGGACGGTCACCTCCCTTTCGCGCATGCGATCTGGCACATCT
TGGGTTCCATCGCAGCTTGGGTACATCATTATGGAATTTGGATGTATTTT
TATGCAGGCtgaatggtagACTCAAGTAGTGACAataaaattcttggaaa
attaTCATCAGCAGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAA
AAGATGGGTACATGAACTGTTGCGGATGCAAAGGACAGGCTTATAACCCA
ACTGATGTCGAACAAAAAGCAAACATTATCACACACGGGATCAACATCCC
TTTTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAATCGAAAGACAATT
TAGACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTTTTGATGTTATTC
ACCGTCTCTACACTCTTCCACGTCATCTCTTTGCTACCGAAGTGGAGgGA
GAGTAGGTTACGAAAGATATTTCATTTGTGTGATCGATTCTCCATTTACA
TCTTCATATCTGCTTCTTACATGCCATGGTTGCTTCTTCAGCGGACGATC
CCGAACGCGCATGACATCGTGACTTTGTTGTGGTCCATTGCTGCCATGGG
GATAGTATACTCGTTAGTCATGCATGAAAAGTACAAAATGCTAGAGACAG
CCATTTATTTGTGTCAAGGATTCGGACCCGCCATCTTTCTCATTAAACAC
GCATCCACAAGTTTATTCGAATTGGCGTTGGGCGGTTTGCTTTACGTCAT
TGGAGTAATTTTCTTCAAATCGGACGGTCACCTCCCTTTCGCGCATGCGA
TCTGGCACATCTTGGGTTCCATCGCAGCTTGGGTACATCATTATGGAATT
TGGATGTATTTTTATGCAGGCtgaatggtagACTCAAGTAGTGACAataa
aattcttggaaaattaTCATCAGCAGGCTGGATCTGTGATCAAAGAAAAG
AACAATGGAGAAAAGATGGGTACATGAACTGTTGCGGATGCAAAGGACAG
GCTTATAACCCAACTGATGTCGAACAAAAAGCAAACATTATCACACACGG
GATCAACATCCCTTTTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAAT
CGAAAGACAATTTAGACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTT
TTGATGTTATTCACCGTCTCTACACTCTTCCACGTCATCTCTTTGCTACC
GAAGTGGAGgGAGAGTAGGTTACGAAAGATATTTCATTTGTGTGATCGAT
TCTCCATTTACATCTTCATATCTGCTTCTTACATGCCATGGTTGCTTCTT
CAGCGGACGATCCCGAACGCGCATGACATCGTGACTTTGTTGTGGTCCAT
TGCTGCCATGGGGATAGTATACTCGTTAGTCATGCATGAAAAGTACAAAA
TGCTAGAGACAGCCATTTATTTGTGTCAAGGATTCGGACCCGCCATCTTT
CTCATTAAACACGCATCCACAAGTTTATTCGAATTGGCGTTGGGCGGTTT
GCTTTACGTCATTGGAGTAATTTTCTTCAAATCGGACGGTCACCTCCCTT
TCGCGCATGCGATCTGGCACATCTTGGGTTCCATCGCAGCTTGGGTACAT
CATTATGGAATTTGGATGTATTTTTATGCAGGCtgaatggtagACTCAAG
TAGTGACAataaaattcttggaaaattaTCATCAGCAGGCTGGATCTGTG
ATCAAAGAAAAGAACAATGGAGAAAAGATGGGTACATGAACTGTTGCGGA
TGCAAAGGACAGGCTTATAACCCAACTGATGTCGAACAAAAAGCAAACAT
TATCACACACGGGATCAACATCCCTTTTGCAGTTGTTGCTGTTTACTTCA
TGGTTATCAAATCGAAAGACAATTTAGACTTGGTCTGTACGTTGGTGTAT
GGCACGAGTCTTTTGATGTTATTCACCGTCTCTACACTCTTCCACGTCAT
CTCTTTGCTACCGAAGTGGAGgGAGAGTAGGTTACGAAAGATATTTCATT
TGTGTGATCGATTCTCCATTTACATCTTCATATCTGCTTCTTACATGCCA
TGGTTGCTTCTTCAGCGGACGATCCCGAACGCGCATGACATCGTGACTTT
GTTGTGGTCCATTGCTGCCATGGGGATAGTATACTCGTTAGTCATGCATG
AAAAGTACAAAATGCTAGAGACAGCCATTTATTTGTGTCAAGGATTCGGA
CCCGCCATCTTTCTCATTAAACACGCATCCACAAGTTTATTCGAATTGGC
GTTGGGCGGTTTGCTTTACGTCATTGGAGTAATTTTCTTCAAATCGGACG
GTCACCTCCCTTTCGCGCATGCGATCTGGCACATCTTGGGTTCCATCGCA
GCTTGGGTACATCATTATGGAATTTGGATGTATTTTTATGCAGGCtgaat
ggtagACTCAAGTAGTGACAataaaattcttggaaaattaTCATCAGCAG
GCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAAGATGGGTACATG
AACTGTTGCGGATGCAAAGGACAGGCTTATAACCCAACTGATGTCGAACA
AAAAGCAAACATTATCACACACGGGATCAACATCCCTTTTGCAGTTGTTG
CTGTTTACTTCATGGTTATCAAATCGAAAGACAATTTAGACTTGGTCTGT
ACGTTGGTGTATGGCACGAGTCTTTTGATGTTATTCACCGTCTCTACACT
CTTCCACGTCATCTCTTTGCTACCGAAGTGGAGgGAGAGTAGGTTACGAA
AGATATTTCATTTGTGTGATCGATTCTCCATTTACATCTTCATATCTGCT
TCTTACATGCCATGGTTGCTTCTTCAGCGGACGATCCCGAACGCGCATGA
CATCGTGACTTTGTTGTGGTCCATTGCTGCCATGGGGATAGTATACTCGT
TAGTCATGCATGAAAAGTACAAAATGCTAGAGACAGCCATTTATTTGTGT
CAAGGATTCGGACCCGCCATCTTTCTCATTAAACACGCATCCACAAGTTT
ATTCGAATTGGCGTTGGGCGGTTTGCTTTACGTCATTGGAGTAATTTTCT
TCAAATCGGACGGTCACCTCCCTTTCGCGCATGCGATCTGGCACATCTTG
GGTTCCATCGCAGCTTGGGTACATCATTATGGAATTTGGATGTATTTTTA
TGCAGGCtgaatggtagACTCAAGTAGTGACAataaaattcttggaaaat
taTCATCAGCAGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAA
GATGGGTACATGAACTGTTGCGGATGCAAAGGACAGGCTTATAACCCAAC
TGATGTCGAACAAAAAGCAAACATTATCACACACGGGATCAACATCCCTT
TTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAATCGAAAGACAATTTA
GACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTTTTGATGTTATTCAC
CGTCTCTACACTCTTCCACGTCATCTCTTTGCTACCGAAGTGGAGgGAGA
GTAGGTTACGAAAGATATTTCATTTGTGTGATCGATTCTCCATTTACATC
TTCATATCTGCTTCTTACATGCCATGGTTGCTTCTTCAGCGGACGATCCC
GAACGCGCATGACATCGTGACTTTGTTGTGGTCCATTGCTGCCATGGGGA
TAGTATACTCGTTAGTCATGCATGAAAAGTACAAAATGCTAGAGACAGCC
ATTTATTTGTGTCAAGGATTCGGACCCGCCATCTTTCTCATTAAACACGC
ATCCACAAGTTTATTCGAATTGGCGTTGGGCGGTTTGCTTTACGTCATTG
GAGTAATTTTCTTCAAATCGGACGGTCACCTCCCTTTCGCGCATGCGATC
TGGCACATCTTGGGTTCCATCGCAGCTTGGGTACATCATTATGGAATTTG
GATGTATTTTTATGCAGGCtgaatggtagACTCAAGTAGTGACAataaaa
ttcttggaaaattaTCATCAGCAGGCTGGATCTGTGATCAAAGAAAAGAA
CAATGGAGAAAAGATGGGTACATGAACTGTTGCGGATGCAAAGGACAGGC
TTATAACCCAACTGATGTCGAACAAAAAGCAAACATTATCACACACGGGA
TCAACATCCCTTTTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAATCG
AAAGACAATTTAGACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTTTT
GATGTTATTCACCGTCTCTACACTCTTCCACGTCATCTCTTTGCTACCGA
AGTGGAGgGAGAGTAGGTTACGAAAGATATTTCATTTGTGTGATCGATTC
TCCATTTACATCTTCATATCTGCTTCTTACATGCCATGGTTGCTTCTTCA
GCGGACGATCCCGAACGCGCATGACATCGTGACTTTGTTGTGGTCCATTG
CTGCCATGGGGATAGTATACTCGTTAGTCATGCATGAAAAGTACAAAATG
CTAGAGACAGCCATTTATTTGTGTCAAGGATTCGGACCCGCCATCTTTCT
CATTAAACACGCATCCACAAGTTTATTCGAATTGGCGTTGGGCGGTTTGC
TTTACGTCATTGGAGTAATTTTCTTCAAATCGGACGGTCACCTCCCTTTC
GCGCATGCGATCTGGCACATCTTGGGTTCCATCGCAGCTTGGGTACATCA
TTATGGAATTTGGATGTATTTTTATGCAGGCtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015331-exon-sc0000210-1491911889:393114..393262 | TCONS_00015331-exon-sc0000210-1491911889:393114..393262 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:393114..393262 | TCONS_00015331-exon-sc0000210-1510915933:393114..393262 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:393114..393262 | TCONS_00015331-exon-sc0000210-1575043694:393114..393262 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:395074..395155 | TCONS_00015331-exon-sc0000210-1491911889:395074..395155 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:395074..395155 | TCONS_00015331-exon-sc0000210-1510915933:395074..395155 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:395074..395155 | TCONS_00015331-exon-sc0000210-1575043694:395074..395155 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:397561..397718 | TCONS_00015331-exon-sc0000210-1491911889:397561..397718 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:397561..397718 | TCONS_00015331-exon-sc0000210-1510915933:397561..397718 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:397561..397718 | TCONS_00015331-exon-sc0000210-1575043694:397561..397718 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:398949..399029 | TCONS_00015331-exon-sc0000210-1491911889:398949..399029 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:398949..399029 | TCONS_00015331-exon-sc0000210-1510915933:398949..399029 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:398949..399029 | TCONS_00015331-exon-sc0000210-1575043694:398949..399029 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:399453..399554 | TCONS_00015331-exon-sc0000210-1491911889:399453..399554 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:399453..399554 | TCONS_00015331-exon-sc0000210-1510915933:399453..399554 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:399453..399554 | TCONS_00015331-exon-sc0000210-1575043694:399453..399554 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:399909..399978 | TCONS_00015331-exon-sc0000210-1491911889:399909..399978 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:399909..399978 | TCONS_00015331-exon-sc0000210-1510915933:399909..399978 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:399909..399978 | TCONS_00015331-exon-sc0000210-1575043694:399909..399978 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1491911889:400086..401108 | TCONS_00015331-exon-sc0000210-1491911889:400086..401108 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1510915933:400086..401108 | TCONS_00015331-exon-sc0000210-1510915933:400086..401108 | Clytia hemisphaerica | exon |
| TCONS_00015331-exon-sc0000210-1575043694:400086..401108 | TCONS_00015331-exon-sc0000210-1575043694:400086..401108 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210 | supercontig | sc0000210:393114..401108 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004254 | AdipoR/HlyIII-related |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
BLAST of TCONS_00015331 vs. Swiss-Prot (Human)
Match: PAQRB (Monocyte to macrophage differentiation factor OS=Homo sapiens GN=MMD PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 3.304e-51 Identity = 100/227 (44.05%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 139 RKDGYMNCCGCKGQAYNPTDVEQKANIITHGINIPFAVVAVYFMVIKSKDNLDLVCTLVYGTSLLMLFTVSTLFHVISLLPKWRESRLRKI---FHLCDRFSIYIFISASYMPWLLLQRTIPNAHDIVTLLWSIAAMGIVYSLVMHEKYKMLETAIYLCQGFGPAIFLIKHASTS-LFELALGGLLYVIGVIFFKSDGHLPFAHAIWHILGSIAAWVHHYGIWMYFY 807
R +MN Y PT E AN TH I A+V + S D + + +YG L LF VST+FH++S W++S LR + FH+CDR IY FI+ASY PWL L+ P A + +W +AA G +Y + HEKYK++E YL GF PA+ + +T L ELA GGL+Y +GV+FFKSDG +PFAHAIWH+ + AA VH+Y IW Y Y
Sbjct: 6 RFQRFMNHRAPANGRYKPTCYEHAANCYTHAFLIVPAIVGSALLHRLSDDCWEKITAWIYGMGLCALFIVSTVFHIVS----WKKSHLRTVEHCFHMCDRMVIYFFIAASYAPWLNLRELGPLASHMRWFIWLMAAGGTIYVFLYHEKYKVVELFFYLTMGFSPALVVTSMNNTDGLQELACGGLIYCLGVVFFKSDGIIPFAHAIWHLFVATAAAVHYYAIWKYLY 228
The following BLAST results are available for this feature:
|
