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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015300 ID=TCONS_00015300|Name=TCONS_00015300|organism=Clytia hemisphaerica|type=transcript|length=987bp
GCCAGAACCTCGTACAGGTTTTAGCACCCTGAACTTCTTTGCTGATGAAA
TAGACtgggaaaatataaaagagacCATGCGTCATATCAGGTGGAAGGAA
ACATTTAGTGACGACCCAAACGAATTATTGAAAACCATGAATGCCCTGTG
TTTCAAAATCTGTAAAGATAATGTACCAACCAGAACACCAATAGAAGGCA
AAAGGAGATCAAAAGTTGAAAGTTGATCTACGATACCCTTAACCAAAAGA
CggagaaaaatcacaaaaaaacttttactcacAAATTCTCAAacccgaaa
aaaaaaaatcaaagaggaGCTGCtgcaaatcgaaaaaaaattgcaaaaat
cctTCCAAGATTCAAAAAAGTTTGCGGAAAATAAAGCTATTGAATCAATC
AGAAAGAATTCTAATATTTCTTTGCATACGCcaagaagaaatcaaaagtg
agaACTAAAATTGGACCACTAATAGACAAAAACGGGAACCTTACAATGAA
GAATAAAGAAATGGCTGACATCCTTTCAAATCAATATGCTAAAGTCTTCA
GTGAACCCATATCACCTGACGATCAAGCTTTCAACACACAAACCACTGAA
ATATCAGAAATGGTAGTCACTGAAAATGGCATAATGAAAGCCATTGACGA
ATTATCACCATCCTTAGCTGCTGGTCCAGATGGTTTCCCAGCAATAGTCC
TGAAACAATGTAAAGAAGAATTAGCCATCCCATTGTGCCATCTATGGAAA
AACAGTCTGGAAAAAGGAATTGTTccaaacaaattgaaaaaatcaactaT
AAACCCAATCTACAAAGGAGGAAACAAATCACTGGCCGCAAACTACCGAC
CAGTCGCCTTAACATCACACGTTATAAAGATCTTTGAGAAAGTCATCAGA
Aagcagtgaggctggaacttcgatttttgaggatttacgattttaccagt
tttttagcaatttttgcctcgctagcccaaatttcgc Run BLAST on NCBI protein sequence of TCONS_00015300-protein >TCONS_00015300-protein ID=TCONS_00015300-protein|Name=TCONS_00015300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=137bp
MKNKEMADILSNQYAKVFSEPISPDDQAFNTQTTEISEMVVTENGIMKAI
DELSPSLAAGPDGFPAIVLKQCKEELAIPLCHLWKNSLEKGIVPNKLKKS
TINPIYKGGNKSLAANYRPVALTSHVIKIFEKVIRKQ Run BLAST on NCBI transcript from alignment at sc0000208:46396..47382 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015300 ID=TCONS_00015300|Name=TCONS_00015300|organism=Clytia hemisphaerica|type=transcript|length=987bp|location=Sequence derived from alignment at sc0000208:46396..47382 (Clytia hemisphaerica)
gcgaaatttgggctagcgaggcaaaaattgctaaaaaactggtaaaatcg
taaatcctcaaaaatcgaagttccagcctcactgctTTCTGATGACTTTC
TCAAAGATCTTTATAACGTGTGATGTTAAGGCGACTGGTCGGTAGTTTGC
GGCCAGTGATTTGTTTCCTCCTTTGTAGATTGGGTTTAtagttgattttt
tcaatttgtttggAACAATTCCTTTTTCCAGACTGTTTTTCCATAGATGG
CACAATGGGATGGCTAATTCTTCTTTACATTGTTTCAGGACTATTGCTGG
GAAACCATCTGGACCAGCAGCTAAGGATGGTGATAATTCGTCAATGGCTT
TCATTATGCCATTTTCAGTGACTACCATTTCTGATATTTCAGTGGTTTGT
GTGTTGAAAGCTTGATCGTCAGGTGATATGGGTTCACTGAAGACTTTAGC
ATATTGATTTGAAAGGATGTCAGCCATTTCTTTATTCTTCATTGTAAGGT
TCCCGTTTTTGTCTATTAGTGGTCCAATTTTAGTtctcacttttgatttc
ttcttgGCGTATGCAAAGAAATATTAGAATTCTTTCTGATTGATTCAATA
GCTTTATTTTCCGCAAACTTTTTTGAATCTTGGAaggatttttgcaattt
tttttcgatttgcaGCAGCtcctctttgatttttttttttcgggtTTGAG
AATTTgtgagtaaaagtttttttgtgatttttctccGTCTTTTGGTTAAG
GGTATCGTAGATCAACTTTCAACTTTTGATCTCCTTTTGCCTTCTATTGG
TGTTCTGGTTGGTACATTATCTTTACAGATTTTGAAACACAGGGCATTCA
TGGTTTTCAATAATTCGTTTGGGTCGTCACTAAATGTTTCCTTCCACCTG
ATATGACGCATGgtctcttttatattttcccaGTCTATTTCATCAGCAAA
GAAGTTCAGGGTGCTAAAACCTGTACGAGGTTCTGGC Coding sequence (CDS) from alignment at sc0000208:46396..47382 >TCONS_00015300 ID=TCONS_00015300|Name=TCONS_00015300|organism=Clytia hemisphaerica|type=CDS|length=414bp|location=Sequence derived from alignment at sc0000208:46396..47382 (Clytia hemisphaerica)
tcactgctTTCTGATGACTTTCTCAAAGATCTTTATAACGTGTGATGTTA
AGGCGACTGGTCGGTAGTTTGCGGCCAGTGATTTGTTTCCTCCTTTGTAG
ATTGGGTTTAtagttgattttttcaatttgtttggAACAATTCCTTTTTC
CAGACTGTTTTTCCATAGATGGCACAATGGGATGGCTAATTCTTCTTTAC
ATTGTTTCAGGACTATTGCTGGGAAACCATCTGGACCAGCAGCTAAGGAT
GGTGATAATTCGTCAATGGCTTTCATTATGCCATTTTCAGTGACTACCAT
TTCTGATATTTCAGTGGTTTGTGTGTTGAAAGCTTGATCGTCAGGTGATA
TGGGTTCACTGAAGACTTTAGCATATTGATTTGAAAGGATGTCAGCCATT
TCTTTATTCTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015300-exon-sc0000208-1491911889:46396..47382 | TCONS_00015300-exon-sc0000208-1491911889:46396..47382 | Clytia hemisphaerica | exon |
| TCONS_00015300-exon-sc0000208-1510915933:46396..47382 | TCONS_00015300-exon-sc0000208-1510915933:46396..47382 | Clytia hemisphaerica | exon |
| TCONS_00015300-exon-sc0000208-1575043694:46396..47382 | TCONS_00015300-exon-sc0000208-1575043694:46396..47382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000208 | supercontig | sc0000208:46396..47382 . |
Blast
The following BLAST results are available for this feature:
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