TCONS_00015166 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015166
Unique NameTCONS_00015166
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015166 ID=TCONS_00015166|Name=TCONS_00015166|organism=Clytia hemisphaerica|type=transcript|length=164bp
AAGAGTACGAAAAGAAAGAGAACCGACTCACCAAGAAAAAGAGGGGCGAG
TCGACGAGAATGGCTCtctttctcaaaactttcaacAACTGGTTGAAAAT
TTGCGCGTTCACACCGAATATCGAATGTGATTTATTTGTTTGACGCACGG
TATAATAACAAAGG
Run BLAST on NCBI

transcript from alignment at sc0000204:432527..432690

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015166 ID=TCONS_00015166|Name=TCONS_00015166|organism=Clytia hemisphaerica|type=transcript|length=164bp|location=Sequence derived from alignment at sc0000204:432527..432690 (Clytia hemisphaerica)
CCTTTGTTATTATACCGTGCGTCAAACAAATAAATCACATTCGATATTCG
GTGTGAACGCGCAAATTTTCAACCAGTTgttgaaagttttgagaaagaGA
GCCATTCTCGTCGACTCGCCCCTCTTTTTCTTGGTGAGTCGGTTCTCTTT
CTTTTCGTACTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008494XLOC_008494Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015166-exon-sc0000204-1491911889:432527..432690TCONS_00015166-exon-sc0000204-1491911889:432527..432690Clytia hemisphaericaexon
TCONS_00015166-exon-sc0000204-1510915933:432527..432690TCONS_00015166-exon-sc0000204-1510915933:432527..432690Clytia hemisphaericaexon
TCONS_00015166-exon-sc0000204-1575043694:432527..432690TCONS_00015166-exon-sc0000204-1575043694:432527..432690Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000204supercontigsc0000204:432527..432690 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015166 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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