TCONS_00015111 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015111
Unique NameTCONS_00015111
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015111 ID=TCONS_00015111|Name=TCONS_00015111|organism=Clytia hemisphaerica|type=transcript|length=1120bp
CTCAAAACTTCAACAACGTGAGTGAAAGAAACAAGACATAACACAAATGG
ACCGAAATAACCTCGAGCTAGCGCTGGAAAACTTGCAGCTTAGAGAGGAG
CTCCAGGATTGGCAGGATCAGTGCCACATCAATCATCATCTCTACCAGCA
AGCGTTGGCACGGATCGCTGAGTTGGAGCACAATCCACCTCAGCCCCAAC
CACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGGAGAA
TATATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGGTA
CTTGTACCAGGGTtggatcaattttcaaaccCTGGTCCATATGGATGCCG
TTCCGGCACAGGTCCAAGTCTTGATACCTGGAGGCAATCAACAACAGCAA
CAGCAGCAAGAAGAACCACAACAACAGCACCAGCAGCAGCAACAACAACC
ACAACAGCAGCAgcagcaacaacaacagcaacaacagcaacaacaacagc
aacaacaacagcaacaacaacaacaacaacaacaacaaaatccaGTAGCT
GTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGCCACC
CCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCCGCTG
TGGAAGAAGCAGAGTAACctgtCCACCGGAATTATGGATTCGCTGGCTCA
TATTCTCGTATTATATGAATCTGAAATGGTAAAATAGATTGCAAGTAAAT
CAAATGGATCTTACAAAACCTTGAAGAAAAGAGTAGTGAATGTCATTACT
ACGACGTGTCAAATATAAACATATCTATCCAAGTGCTACTGTAGAACAAA
AGCATCAAGAATTTAGAATCACAGTTATTCAAGAGATTCTTATATTCATT
TTATTCGTCAAGTTTTTGTTTGCAAATTACTTTACCAAGATCTGTAATCT
TAATAGCCTGCCTCAAAAGTATGTGAACACTTAAGATTTAGGCCTACTTC
AAAGTGCTGCCACTTTTTATCCaagaaaaagtacaaaaaatgtgaaacag
atttgaaatcagcaagcttaaaatatttcataagaTTTCATGTTACGATT
TTTAGCATAGGAAATTTTTC
Run BLAST on NCBI

protein sequence of TCONS_00015111-protein

>TCONS_00015111-protein ID=TCONS_00015111-protein|Name=TCONS_00015111-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MDRNNLELALENLQLREELQDWQDQCHINHHLYQQALARIAELEHNPPQP
QPPIQQPQPPAQQMIGGEYIRLIVPCRNGAQPHRYLYQGWINFQTLVHMD
AVPAQVQVLIPGGNQQQQQQQEEPQQQHQQQQQQPQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQNPVAVPPVVAPLPVANIDQPPPPAVDPAFLVQPPLP
AVEEAE
Run BLAST on NCBI

transcript from alignment at sc0000204:411760..417984+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015111 ID=TCONS_00015111|Name=TCONS_00015111|organism=Clytia hemisphaerica|type=transcript|length=6225bp|location=Sequence derived from alignment at sc0000204:411760..417984+ (Clytia hemisphaerica)
CTCAAAACTTCAACAACGTGAGTGAAAGGTAAGGGACTTTTCTGTAAGCG
TGAAACTAATTCTGTAGgttagattttaaatttttctatctacgctagat
caaaaatagtttttatgaaaatctttttttggaaataaaacattttttca
gcTTGACCTAAAAGATTTGATCCAATTTTTCTATTGTGTGAAACGTGGGT
GTTTAATTCTTCCTTTTTCGATTTCTTAACAGAAACAAGACATAACACAA
ATGGACCGAAATAACCTCGAGCTAGCGCTGGTGAGTAATTTTAgataata
ttttttattattattacacTTGCTGATTCTCCTGTTCACCAGGTAGCCCT
GTAGAATAGCTGTACATCCTGAATAAAGAACACGTCGCACTCCGTTAAAA
AACCATTTTTATGTAATTTGTCGCTTTTCCACTACAATGTCCagcccatt
gagtttaaagcccgaagggctagagttcaatctctaacttttttcaggca
agaaaaagtgacgacagattgaatctagcaattcctttgtaaAGCTCTTT
CACGATAATACGGCAGCAGTTGGAACTTTCCCTAACCGGAAATAACCTCA
ATATCAGATTATCTTTCTCTAAACCCCCCTCAATTTTAAGACTATGTAAT
TGAAAATTGCTACGCCACTAACCACTTTTTTAATTATGTCTATTTATCAG
GAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGGATCAGTGCCA
CATCAATCATCATCTCTACCAGGTAATTCTATTttatctaaattttgaaa
aaagggaTCTCAAATCGTAATTTCGGAAGGGGTCTTCAGATCTTatgaat
ataaatatttattattcttatcaaacaaTCCAAACGGCCGATTTGTGATT
TTAATCAACAAGACAGTTGTTAGCGGAGCAAACTTGAGTATCATCTTTAA
TTATCTACGCCTACAGCCTGAAAGCTCTCAATGGTTGCCAAAAGTGTTTT
TCGATAGATTTAAACCTTAGCTGAGAGGCAAAAGTTTTAAGCCCTTGGTT
ACTCATAGCAACGGTATTGTATCTTTCATACCAATGGAAAGACCTCgaaa
ttctaaatttttataattgattgaaatttttatgacgtcCTGCCTCGTTA
ATAAGCCCTTTGAAGGTAAAAAAAGCTAAGaaatgtttcaaattttgacc
ggattatttttaattttctacaACCATCGATGAGTAACCAATGGACTTAA
AGTATTTGCCTTTCTCGGCCAAaagtagcctgggaatccaagggTTAAAC
TTTTCCCACAGTCTAGCTTATATCatatttttgcttgttttatttAACTT
TTAACGCTAGGGGTAGTACCAGCAGTCTGATTGGCCAGATTTTGTGCGTA
CagtaaaagtgaaaaccccccTTTTAGATATGCAAACTTTGTATGAGAAC
CCTTCATTGAAAAAAAGCTACGAATGCCATTTTGGAATATGCCTAAAATT
GTATATAAACAGTCAAAACTAACTGTTGATAGAAATATGAATGATGTGGG
AATGATggtaaaattcatcaaaaattttgttagTTTGAAATGTATTCAAC
TATAGGTTGACAAGCCTCACATTTGAAACTGTTCCTCTAAACAGTGAtcg
aatttaaaattttatgttttgatttatatttttcaGCAAGCGTTGGCACG
GATCGCTGAGTTGGAGGTAaatatttcatcaaatattTGTACCTTTATCT
TTAccggggtttcagggggtacctgatTCCACAATTCctccaattttttc
tccaatttccgtgaaccaaaattccgtcaccgaaaattcctttgagcTTC
AATTTTTTCGTCGAAAATTCCAcaaatttggaatatcttttaccaattcc
gaaattccgcaattttttttgctaaattccgtttttccgcactaaaattg
tctaattttccgtctccgtcagagaacccaatttccgtaattccgtctta
attttcgccaaattccgccactccgtccgaaaaaaagggccgattccgct
cctccgccaaacgTGAACCCCCCTTTACCTTTTTATTAGTATGTATTGCA
CAATAACAGGTCTCTGATGCCCTTAGATGTTCTGGACCgcacgcgcgcta
cactgttcgacgcagcgagtcttaTTGGATAGTTTATTTAGCCTAAGCCT
GATAAGTATTAAAATCTTTTGGCTCCATTTAAACTTTACATATATATTAT
AATGCGCTTAAATCAGAGCGGCTGTATGGGTCAGGAATACTGTTTTCCAG
TCAAATTTTTGGCTGAATCCCAGCataccaaaaattgaaaaaataacacT
GTCATACTGGTTTGCAGCGGTTGCAAAAATAAGGTTAATCGCCATCACCG
TCTGATttcaaaataccgttttccaGACATTTTCATCAAATCCCTTAATC
CTGTACAAAATAAACACAAGTTGGCAAGGGTAGAACCCCCAGGCCTTGAA
GCAAACATGTGAAACCTCTAGGCTGCATATCACGTTCATCAAATGCAAAA
TCTTGTTGAAAATTCTCTTCAATTATACCTTATACCTTTATTCTCAACTA
AGAGTTCtcatcttttatttttatacagCACAATCCACCTCAGCCCCAAC
CACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGTGAGT
AATATTGTTCATATTCATCAAAAAAGTAACATATGTGATACACAATCAAA
CAGTTTCCTCTCCAGACTtgagttgaaaatttcaaacgtTAAGCTTTTGA
CATTTATTTATCAATATAAAGttcatacccagcacctatttttcaGTCCA
CTCTGCTTGAATAagagttgaaaatttcaaacgtCAAGCTTTTGACATTT
ATTTATCAATATAAAGttcatacccagcacctatttttcaGTCCACTCTG
CTTGAATAAGAAACAAAGTCTCTTCTTATAATTTCATTTACACTATTTCT
ATTGCTGGATGTCGCTGCTAAATTGGCTATTCGTTTCatagattttattt
caaaaccaaaCTGTTATACTGTACTTGCAGAAAAATCTTGCAcattgaat
attgaatattgTTTGGATAGGATTCTCCTCTATCATAGGAACGTTTTGAA
AGATAAAGTAATTTTACAAACATAACACGTTGAAACGTTGTTAATCGAAT
AGTTGATGATTCCTAACATTAAATTTCTCATTATATTTTTAGGGAGAATA
TATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGGTACT
TGTACCAGGGTAAGGAATTCACCTTTTCTCTCGCAGCGCTTTGCGGCTTC
ACGAAAGGCATTTTAAATTCGGtcatttcaaactttttcaaattctccCA
TTTTTCAGTGCGAATTGAAGATACAAAGATTGAAATAGGCAGCAGTGCCA
AAGTTAAGCTCAACTGTTTGAAATTGTAAGGTCGTTTCCCCGAATTCAAT
ATTCATGTAATCATGTAGACTAGAAAGCGTTTGCGTTTCTTAAGATATAG
AAACGCGGGAAtagtgtttgaaaatttttcttataatcgATATTTGATAC
CTtaattgcaaaatattatggCATATAGGTATTTTCAATTGCTGTAAAGC
TTACGTCGTTATATTTGTATTTGGATTGTTTTATATTCAACTTTATTGAC
AGGTtggatcaattttcaaaccCTGGTCCATATGGATGCCGTTCCGGCAC
AGGTCCAAGTCTTGATACCTGGAGGCAGTAAGTtcaattgtaaattttta
atggTGTGAAACATCTATCTAGAAACAAACTATCCCAATAGTAGATTTTT
AACTTACAGACTCTATATCTTTATGCAAAACAAACGGTATCAATATTATG
GGAATCAAGATTTTGCGTAGTAATCGCTTTTGAATTTCCTTTAGCGAGTA
AGCAAAGCCATAAGCTGCCAGTTTGAAACACATTGTGAATAGTAAAAAAG
AGGTTGTTATTAAAATCCTATTGAGTGCCACTTATTATAGCAATTGTTCA
ATTTAGCGCTCTACTAGAAAATAGTGAAACAAAATCATCTTAGACCAAAA
ATGGGAAAACGCAACTTCTTTTTCACCAGAACAATGCATTACACGTCCAT
GCTCTACATTAGCTTTGAGAAACTAAACTTTATCTTAAGATCAACAACAG
CAACAGCAGCAAGAAGAACCACAACAACAGCACCAGCAGCAGCAACAACA
ACCACAACAGCAGCAgcagcaacaacaacagcaacaacagcaacaacaac
agcaacaacaacagcaacaacaacaacaacaacaacaacaaaatccaGTA
GCTGTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGCC
ACCCCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCCG
CTGTGGAAGAAGCAGAGTAACGTAAGAAATTAAATTACTTGGCacgctac
acgcttttttataagaatggtgttttttcatttcatcatggatattctta
acttttttgcgaaaatcatccaaaaatattcttacgctATTCTTAGATTA
AGATCGAAAATGGGCAATCTActggttaaaatgcattaaaaatggcattc
tcagtttcagttgctaaattccatgatggtaatattcttaccatgttctt
aattttttggccattttcatcatggacattcttataaagtgtattcttat
aaaaaagcgtgtacctttAAAAGATTAATTTCTATAAAGATTCTTTCTAG
TCTAAAGTAAGATTCAATGGCCTCTTCAAATGGGTTATTTTCTCCCACTG
GCCCGtaacaaaatgaaatttttaaaaagtctctttttttgttttcaaaa
atgaacaTGGATTTTTGGAGACATGCACAGGTCTGCTATAAATTCTAACT
CAAAAAATTTCAGAgggaaaggtaaaaaaaaaatctttttattgcTATTG
GTTTCCCGaacgaaaataaaataaaggaCTTTATGTTATTTGCTCCAATG
TGGTTATTTTCATAGTAAACTAAATATACAAAATTTGTTCTATTTATATA
CCCATGTGATCTTCTAGTCACGTGGTCAAAACCGTCAATCATATTTCATA
TAGTTTTCCATcagaaattcaattttaaaagttaatttgctcaaaatctt
tttctttaaaacaagGGACCCTTTAACTTTTTTAGGTATTTCAACACCTC
TTGtcgtaaaatattttcttatgtAGACGTGCACGACCTTGCCGGTTCTA
GCCAGATCTTGCAAGAAATGACACAAGATCTTACCAAACTCTTGCAAGAA
ACTTCAAATAAGAAATTGAAGAGCCACATCTTCTAAACTCTCATAAGATC
TTAACAAGTTTTTTGACCAGGGATAGCATTTATGATTTTGCGCGTTTTCG
TTTTGCATATGAAAGCCGCACTAGGACAAAAGCCTGGGGGCACTATGTCG
ATATATCGGCATGTATTGCCAAAAAATTTGCATTGGAAAtcaaaccctta
cagtgcagaccTTGAGCAGTAAAAAGGTGCCTTTATAATGCATTTTACCG
AATTTTTCTGACCCTTTCAGCGTAGTTAggttcatatcttattttgctga
agctaCCTAAAGATGACTCTGAAATGGCGACACATTGTGTAGAACGAATC
AAAATGGGTACAAGTCAAAGACAGACCAGgcttaaaaatatatatgataa
ttttatgacttttttatttttagctgtCCACCGGAATTATGGATTCGCTG
GCTCATATTCTCGTATTATATGAATCTGAAATGGTAAAATAGATTGCAAG
TAAATCAAATGGATCTTACAAAACCTTGAAGAAAAGAGTAGTGAATGTCA
TTACTACGACGTGTCAAATATAAACATATCTATCCAAGTGCTACTGTAGA
ACAAAAGCATCAAGAATTTAGAATCACAGTTATTCAAGAGATTCTTATAT
TCATTTTATTCGTCAAGTTTTTGTTTGCAAATTACTTTACCAAGATCTGT
AATCTTAATAGCCTGCCTCAAAAGTATGTGAACACTTAAGATTTAGGCCT
ACTTCAAAGTGCTGCCACTTTTTATCCaagaaaaagtacaaaaaatgtga
aacagatttgaaatcagcaagcttaaaatatttcataagaTTTCATGTTA
CGATTTTTAGCATAGGAAATTTTTC

Coding sequence (CDS) from alignment at sc0000204:411760..417984+

>TCONS_00015111 ID=TCONS_00015111|Name=TCONS_00015111|organism=Clytia hemisphaerica|type=CDS|length=4347bp|location=Sequence derived from alignment at sc0000204:411760..417984+ (Clytia hemisphaerica)
ATGGACCGAAATAACCTCGAGCTAGCGCTGGAAAACTTGCAGCTTAGAGA
GGAGCTCCAGGATTGGCAGGATCAGTGCCACATCAATCATCATCTCTACC
AGCAAGCGTTGGCACGGATCGCTGAGTTGGAGCACAATCCACCTCAGCCC
CAACCACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGG
AGAATATATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACC
GGTACTTGTACCAGGGTtggatcaattttcaaaccCTGGTCCATATGGAT
GCCGTTCCGGCACAGGTCCAAGTCTTGATACCTGGAGGCAATCAACAACA
GCAACAGCAGCAAGAAGAACCACAACAACAGCACCAGCAGCAGCAACAAC
AACCACAACAGCAGCAgcagcaacaacaacagcaacaacagcaacaacaa
cagcaacaacaacagcaacaacaacaacaacaacaacaacaaaatccaGT
AGCTGTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGC
CACCCCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCC
GCTGTGGAAGAAGCAGAGTAAATGGACCGAAATAACCTCGAGCTAGCGCT
GGAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGGATCAGTGCC
ACATCAATCATCATCTCTACCAGCAAGCGTTGGCACGGATCGCTGAGTTG
GAGCACAATCCACCTCAGCCCCAACCACCCATCCAGCAGCCCCAACCGCC
CGCACAACAAATGATTGGTGGAGAATATATACGTCTAATAGTACCCTGCC
GGAACGGTGCTCAGCCTCACCGGTACTTGTACCAGGGTtggatcaatttt
caaaccCTGGTCCATATGGATGCCGTTCCGGCACAGGTCCAAGTCTTGAT
ACCTGGAGGCAATCAACAACAGCAACAGCAGCAAGAAGAACCACAACAAC
AGCACCAGCAGCAGCAACAACAACCACAACAGCAGCAgcagcaacaacaa
cagcaacaacagcaacaacaacagcaacaacaacagcaacaacaacaaca
acaacaacaacaaaatccaGTAGCTGTGCCTCCAGTTGTGGCGCCACTGC
CCGTTGCCAATATTGACCAGCCACCCCCGCCAGCTGTTGACCCTGCCTTC
TTGGTCCAGCCACCACTACCCGCTGTGGAAGAAGCAGAGTAAATGGACCG
AAATAACCTCGAGCTAGCGCTGGAAAACTTGCAGCTTAGAGAGGAGCTCC
AGGATTGGCAGGATCAGTGCCACATCAATCATCATCTCTACCAGCAAGCG
TTGGCACGGATCGCTGAGTTGGAGCACAATCCACCTCAGCCCCAACCACC
CATCCAGCAGCCCCAACCGCCCGCACAACAAATGATTGGTGGAGAATATA
TACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGGTACTTG
TACCAGGGTtggatcaattttcaaaccCTGGTCCATATGGATGCCGTTCC
GGCACAGGTCCAAGTCTTGATACCTGGAGGCAATCAACAACAGCAACAGC
AGCAAGAAGAACCACAACAACAGCACCAGCAGCAGCAACAACAACCACAA
CAGCAGCAgcagcaacaacaacagcaacaacagcaacaacaacagcaaca
acaacagcaacaacaacaacaacaacaacaacaaaatccaGTAGCTGTGC
CTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGACCAGCCACCCCCG
CCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCACTACCCGCTGTGGA
AGAAGCAGAGTAAATGGACCGAAATAACCTCGAGCTAGCGCTGGAAAACT
TGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGGATCAGTGCCACATCAAT
CATCATCTCTACCAGCAAGCGTTGGCACGGATCGCTGAGTTGGAGCACAA
TCCACCTCAGCCCCAACCACCCATCCAGCAGCCCCAACCGCCCGCACAAC
AAATGATTGGTGGAGAATATATACGTCTAATAGTACCCTGCCGGAACGGT
GCTCAGCCTCACCGGTACTTGTACCAGGGTtggatcaattttcaaaccCT
GGTCCATATGGATGCCGTTCCGGCACAGGTCCAAGTCTTGATACCTGGAG
GCAATCAACAACAGCAACAGCAGCAAGAAGAACCACAACAACAGCACCAG
CAGCAGCAACAACAACCACAACAGCAGCAgcagcaacaacaacagcaaca
acagcaacaacaacagcaacaacaacagcaacaacaacaacaacaacaac
aacaaaatccaGTAGCTGTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCC
AATATTGACCAGCCACCCCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCA
GCCACCACTACCCGCTGTGGAAGAAGCAGAGTAAATGGACCGAAATAACC
TCGAGCTAGCGCTGGAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGG
CAGGATCAGTGCCACATCAATCATCATCTCTACCAGCAAGCGTTGGCACG
GATCGCTGAGTTGGAGCACAATCCACCTCAGCCCCAACCACCCATCCAGC
AGCCCCAACCGCCCGCACAACAAATGATTGGTGGAGAATATATACGTCTA
ATAGTACCCTGCCGGAACGGTGCTCAGCCTCACCGGTACTTGTACCAGGG
TtggatcaattttcaaaccCTGGTCCATATGGATGCCGTTCCGGCACAGG
TCCAAGTCTTGATACCTGGAGGCAATCAACAACAGCAACAGCAGCAAGAA
GAACCACAACAACAGCACCAGCAGCAGCAACAACAACCACAACAGCAGCA
gcagcaacaacaacagcaacaacagcaacaacaacagcaacaacaacagc
aacaacaacaacaacaacaacaacaaaatccaGTAGCTGTGCCTCCAGTT
GTGGCGCCACTGCCCGTTGCCAATATTGACCAGCCACCCCCGCCAGCTGT
TGACCCTGCCTTCTTGGTCCAGCCACCACTACCCGCTGTGGAAGAAGCAG
AGTAAATGGACCGAAATAACCTCGAGCTAGCGCTGGAAAACTTGCAGCTT
AGAGAGGAGCTCCAGGATTGGCAGGATCAGTGCCACATCAATCATCATCT
CTACCAGCAAGCGTTGGCACGGATCGCTGAGTTGGAGCACAATCCACCTC
AGCCCCAACCACCCATCCAGCAGCCCCAACCGCCCGCACAACAAATGATT
GGTGGAGAATATATACGTCTAATAGTACCCTGCCGGAACGGTGCTCAGCC
TCACCGGTACTTGTACCAGGGTtggatcaattttcaaaccCTGGTCCATA
TGGATGCCGTTCCGGCACAGGTCCAAGTCTTGATACCTGGAGGCAATCAA
CAACAGCAACAGCAGCAAGAAGAACCACAACAACAGCACCAGCAGCAGCA
ACAACAACCACAACAGCAGCAgcagcaacaacaacagcaacaacagcaac
aacaacagcaacaacaacagcaacaacaacaacaacaacaacaacaaaat
ccaGTAGCTGTGCCTCCAGTTGTGGCGCCACTGCCCGTTGCCAATATTGA
CCAGCCACCCCCGCCAGCTGTTGACCCTGCCTTCTTGGTCCAGCCACCAC
TACCCGCTGTGGAAGAAGCAGAGTAAATGGACCGAAATAACCTCGAGCTA
GCGCTGGAAAACTTGCAGCTTAGAGAGGAGCTCCAGGATTGGCAGGATCA
GTGCCACATCAATCATCATCTCTACCAGCAAGCGTTGGCACGGATCGCTG
AGTTGGAGCACAATCCACCTCAGCCCCAACCACCCATCCAGCAGCCCCAA
CCGCCCGCACAACAAATGATTGGTGGAGAATATATACGTCTAATAGTACC
CTGCCGGAACGGTGCTCAGCCTCACCGGTACTTGTACCAGGGTtggatca
attttcaaaccCTGGTCCATATGGATGCCGTTCCGGCACAGGTCCAAGTC
TTGATACCTGGAGGCAATCAACAACAGCAACAGCAGCAAGAAGAACCACA
ACAACAGCACCAGCAGCAGCAACAACAACCACAACAGCAGCAgcagcaac
aacaacagcaacaacagcaacaacaacagcaacaacaacagcaacaacaa
caacaacaacaacaacaaaatccaGTAGCTGTGCCTCCAGTTGTGGCGCC
ACTGCCCGTTGCCAATATTGACCAGCCACCCCCGCCAGCTGTTGACCCTG
CCTTCTTGGTCCAGCCACCACTACCCGCTGTGGAAGAAGCAGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008469XLOC_008469Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015111-proteinTCONS_00015111-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015111-exon-sc0000204-1491911889:411760..411787TCONS_00015111-exon-sc0000204-1491911889:411760..411787Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:411760..411787TCONS_00015111-exon-sc0000204-1510915933:411760..411787Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:411760..411787TCONS_00015111-exon-sc0000204-1575043694:411760..411787Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:411992..412039TCONS_00015111-exon-sc0000204-1491911889:411992..412039Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:411992..412039TCONS_00015111-exon-sc0000204-1510915933:411992..412039Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:411992..412039TCONS_00015111-exon-sc0000204-1575043694:411992..412039Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:412460..412531TCONS_00015111-exon-sc0000204-1491911889:412460..412531Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:412460..412531TCONS_00015111-exon-sc0000204-1510915933:412460..412531Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:412460..412531TCONS_00015111-exon-sc0000204-1575043694:412460..412531Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:413446..413475TCONS_00015111-exon-sc0000204-1491911889:413446..413475Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:413446..413475TCONS_00015111-exon-sc0000204-1510915933:413446..413475Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:413446..413475TCONS_00015111-exon-sc0000204-1575043694:413446..413475Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:414388..414453TCONS_00015111-exon-sc0000204-1491911889:414388..414453Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:414388..414453TCONS_00015111-exon-sc0000204-1510915933:414388..414453Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:414388..414453TCONS_00015111-exon-sc0000204-1575043694:414388..414453Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:415002..415068TCONS_00015111-exon-sc0000204-1491911889:415002..415068Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:415002..415068TCONS_00015111-exon-sc0000204-1510915933:415002..415068Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:415002..415068TCONS_00015111-exon-sc0000204-1575043694:415002..415068Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:415462..415536TCONS_00015111-exon-sc0000204-1491911889:415462..415536Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:415462..415536TCONS_00015111-exon-sc0000204-1510915933:415462..415536Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:415462..415536TCONS_00015111-exon-sc0000204-1575043694:415462..415536Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:415949..416230TCONS_00015111-exon-sc0000204-1491911889:415949..416230Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:415949..416230TCONS_00015111-exon-sc0000204-1510915933:415949..416230Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:415949..416230TCONS_00015111-exon-sc0000204-1575043694:415949..416230Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1491911889:417533..417984TCONS_00015111-exon-sc0000204-1491911889:417533..417984Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1510915933:417533..417984TCONS_00015111-exon-sc0000204-1510915933:417533..417984Clytia hemisphaericaexon
TCONS_00015111-exon-sc0000204-1575043694:417533..417984TCONS_00015111-exon-sc0000204-1575043694:417533..417984Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000204supercontigsc0000204:411760..417984 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.6839	12.0676	6.79276	4.21228	0.525178	0.830005	0.407983	0.742985	0.26754	0.703215	0.355097	0.337172	0.560069	0.376567	0.718027	0.702112	1.08112	0.693198	0.538175	0.779761	2.68839	2.25266	12.3109	10.5664	0.125513	0.261215	2.3487	1.77169	10.7321	11.0123
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015111 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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