TCONS_00014944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014944
Unique NameTCONS_00014944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3227

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014944 ID=TCONS_00014944|Name=TCONS_00014944|organism=Clytia hemisphaerica|type=transcript|length=3227bp
CAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATT
TTGATAACCTCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGA
AGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCT
ACTGGTGACGCTATGTTTTTGAAGTTGGAATCGGCTCGAAAGAACGAAAG
AGACGAAGAGAACATTCCCTTAACGAGCAACAGATCGACAATACACTCGG
GGCGTGAACAATTCCCACCTCCAGCCGGGCGGAATTTATATACACCGCCC
TTAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGTTCAACTCAAC
ATCAGCAAAAGACGGTACTGATATAGGCTATCTGATGCGTTCTCCAAAAC
GACAAAATGGTGGACCGTCCAATAGAAATCATCGAACCAGGGACCATGTT
GATGCCGTCAACTTTCGAAGACGAAACAAACAAAACCAAAGATCCGTTCA
AAACAAACGATCCGTTATTGAAGAGCCTTTCAGACGCCATAATTACAAAA
GCCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGCACGCTT
GAAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACAGGCAATCGTGG
AGCATCGATGGGGATGTTGGATAGCGATGGGAACAGTAGCGACAATGGCG
AAACTACATTACGAAAAAAGAAGAATACATATATCAAGAGCAAAGAACTC
ATCACTTATTTTGCACAACTCGCTCGAAGTAAGAACCCTACCGATGCAAT
AGATCTCAAGATGGTGGACCGTCTCATTCGCAATGGTGCCAACCTCAACG
TTACCGATAAATACGGTCAAACGGTCATGCATGAAGTGGCAAAGAACTGG
CACACTGACGTCGCAAAATATCTCATCAAGCGGGGCGCTATTTACGACGC
CAAAGACCGTTATGGGCGGACACCCCTTCATCTTGCATCGGCTGTGGGAC
ATGTAGAAATGATTGATTTTTTAGTGGGTCAAGATCACGAGAAACTAAAA
GACGTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAA
CAACTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGA
ACGATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAAC
GGACGTATTGAAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGC
AGTGTACGATGATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGA
TGCCTGGTGTAGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCT
GCCAATAGAAAACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTT
AGCAGATGAGGAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAAC
GAGAACGTCAAAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAA
CAGATTAAGAAAGGTGAACTTGCCAAGTCCGTCTTGGAGAAAGTAGTTGA
GCATTGGGAAGTATCTTTAGTAGTCCATCCAGCCATTCAATTATTAATAA
AAAAGAAGTGGATGCTGATTGGTCGAAAGGCTTCAATTTTCAGTCTCGTT
CTCAACGTCATTTACGCACTTTTATGGTCGGCAGTTGGCGTCGCAACGCC
GGTAATGGGACCAACAATTTATCGGCCCTTTTCGCTGTGGTGGCATATTA
CAGTGCTTGAGGTGATCGGAGTTGGCTTGACCATCTATTTCATGGCTACT
CACATTGTGGAGATCCAGATCGACAAGCGACGTGATAACGCTTATGGGAA
ATGGGTGATCGCACAAGCAGAACGCGACCTCAAATATTGTCATCCCAGGT
GGCCTGAAGAGAGACGTCACATTGATGACACCATTGAAGCTATtggaaat
cgaaagcgaaagcgaTATTTCTCCGATGGATGGAATTGTTTTGATTGGTT
CGTTTATTTGTTGGTATGGGTCGTTATGGCAACTCGTTTATTGAACCTCT
TACTGGAGGACGATAAATTGAAATATTACCACATGCGCATCTTCTCTCTC
ACACTTATCTTCATTTGGCTTCGTCTATTACGCAGACTGAAACCTTTCCC
TTACTTCGGGCCTTTCATTATCATGCTGGGCTACGTCGTTATAGATACCA
TAAAATTTCTggtcttgtttttattgatttacaTTCCGTATTGTTGCGCT
TTTTGGATGATCTTCGGCGGACCACAATTACGTCATTCCAAATCATTTCT
TCACGAGATCAATGATATGGtgtatgatatttttcaaatgtcattAGTGG
GCGAGTTCAAATGGAAAGAATTTGTGGAGATTGATGAAACATTTGCACAG
CTTTTGACGGGTTCTTACATGGGTTTGACGTCAGTGGTTGCCATCAGTTT
GTACATAGCTTTGTTGGCGACCACCTTTTCTCGGAAGTATCCACAAAGTG
TAGCCATGGCGCTCATCATGCAAGCGGAAAGATGCGTACAGGTGGAACGA
ATGATCCCTAAGAAAACACACTTGAACATGAAAGCTTTCTTCCACGAAGA
CTGTGCACCTTTGGTTGAGGAAATGAAAGGTGAATCAATCTCTATAGCAA
CTAACAACGCGACGTTGAGCAAGTTGGATTTCAGTCGTTGGAGAGGTCGT
CATGAAAACGAAATCGATGAAGTTCGTTACAGTATGAGAGAATTGAATAA
AAAGCAAGATCGTCTCGTTCATCAGTTCAGGTTTATTCTCGATAACCTtg
acgatgatgatgatatGGTCAGTGAAATATAGACTTTTTGGCTAAATCAT
CTGAAATTTGGTTTTGATAGGCGAGGTGAATCATCGTCAGTAAAATGAGG
CAATGATTTTTCCTGAATCTTTTCATGAATATGGGACGGACGAAGCAATG
GAATCTTGAACTTTGTGATAAAGACAATATGGGAACTGGGGTTATCCACA
GACTACAGTTTGTGATAAGAAATTCTTTTGACGTAGCAGTTATGGTGAAA
CTTTAAACATTTATATTTCAAGACACTATTTTTGGAACTGAGGAGAGCAT
TCACAAAATAAGTGAAACCATTGAGCCCTTTTTAACGGTTAAAATAGTTT
GGTCTCTTTACTACAAATTACGTATTGTAGAAGCTATGAAATtcagtact
ctcgggtaccttatagccggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000201:371099..381394+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014944 ID=TCONS_00014944|Name=TCONS_00014944|organism=Clytia hemisphaerica|type=transcript|length=10296bp|location=Sequence derived from alignment at sc0000201:371099..381394+ (Clytia hemisphaerica)
CAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATT
TTGATAACCTCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGA
AGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCT
ACTGGTGACGGTAAGCAAAAGTAAACGCTTTTTGGTTTTATTCGACTTTT
GGTTTTATTTGAGACCTTTttatttatcttcttttttgCTGTTCTTGCTG
GTTCTTGTCGATTTCACAGACCTTACCTTAGAGAGacttaaattttgcaa
aaagtgACCATCAGAGAGGCGATATTCGAAAACTGTCTCACCTTTAAGAA
ATTTTCATAACTTTGATTCGATTTtaagagactttgaaaggtaaaAAAAG
CTCCTTCGTTATGGTCTGCACATACCAAAGTACCCAAATGTTCCTAAGTA
ACCTCCTGTCCTAATTTTGGTGACTGATGAATCCAGCACTGTCAATCAAA
GTAGCTCTCATGGGCGTAATCCACTATTTCtaacaaataagaaaatatta
tatCCGTGAATCATTTTTAGGaacgtcaaatttaaaaaaaaacattaatc
aGTTTGGAACATTTGTTAGATAGTAAGCACATGATTTTCCCTCTAATAGT
CATCATATTTTTGTTCTGTCCCACTAGCTATGTTTTTGAAGTTGGAATCG
GCTCGAAAGAATGAAAAAGACGAAGAGAACATTCCCTTAACGAGTAACAG
ATCGACAATACACTCGGGGCGTGAACAATTTCCACCTCCAGCCGGGCGGA
ATTTATATACACCGCCTTTAATTGTCAAAACACCGGATGAAGACTATCGA
AAACAGTTCAACTCAACATCAGGTACGATTTATTGTCTAGTGCTAGGTTN
ATTCTACTTTGATATTGCCAGAATATATGTGCTCTTCTTTTTAAGAAACT
TAATTTTTCAATAGAACCTTaacttcattaaaatatttatcataACACTG
TATGAATCGGCTATCGAAATTCTCTTCTTTCTCTTTACTATCTTTTTCAG
CGTGCGGTTTTCAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATT
TCGAGAATTTTGATAACCTCTGCACATTGGAATATACCACGTTCTGTATT
TTGTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAA
TAAAGATCTACTGGTGACGGTGAGGAAAAGCGTTTTGGTTTTATTCGAGA
TCTTAaacctttttatttattttcttttttgctgTTCTTGCTGGTTCTTG
TCGATTTCACAGACTTTACCTTAGAGAGACTTAATTTTGCGAAANTACGA
TTTATTGGCTAGTGCTAGGTCGCGGCAGCTACAAGGTTTTACTGTAGGAT
TTCCATCAAGAGCAAACTGCATGTTTAGTACCTTTTCAAGTAGCAGCTTT
TCAAGTTCTGAGAGTCTGCAAAATATGAGCCAGAGTGAAGAATCTTGCTG
ACGTTATCTACATTTTCACATCGAAATTTTCCTTTAAGCTGACAACGTTT
TGTTAAGAACTCTAGATTAATTCATGCcttaataattttataaaaccGCT
GAATGATATTTCGCTAATTCTTTTACCTGTGACTTGTAGCAAAAGATGGT
ACTGATATAGGCTACCTGATGCGTTCTCCAAAACGACAAAATGGTGGACC
GTCCAATAGAAATCATCGAACCAGGGACCATGTTGATGCCGTCAACTTTC
GAAGACGAAACAAACAAAACCAAAGATCCGTTCAAAACAAACGATCCGTT
ATTGAAGAGCCTTTCAGACGCCATAATTACAAAAGCCCGGCGCCTCTCGA
TGAAGCACGCATTTCAGTCAAGCAGCGTACGCTTGAAGAACGCGGAGANA
TAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGC
AGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACA
GGTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGTATCGTCA
AACATAGTAAGCGATCTATTGTTGTATTATGATCTTACTAAAACACTCAC
GACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTAAAATTAT
TATGAATTATAACGTGTTCTTTGATGATATCGAGCGTGCTTTATCACTTG
TNCATTTGTTAGATAGCAAGCACATGATTTTCCGTCTAATAGTGatcata
tttttgttttatctcACTAGCTATGTTTTTGAAGTTGGAATCGGCTCGAA
AGAACGAAAGAGACGAAGAGAACATTCCCTTAACGAGCAACAGATCGACA
ATACACTCGGGGCGTGAACAATTCCCACCTCCAGCCGGGCGGAATTTATA
TACACCGCCCTTAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGT
TCAACTCAACATCAGGTACGATTTATTGGCTAGTGCTAGGTCGCGGCAGC
TACAAGGTTTTACTGTAGGATTTCCATCAAGAGCAAACTGCATGTTTAGT
ACCTTTTCAAGTAGCAGCTTTTCAAGTTCTGAGAGTCTGCAAAATATGAG
CCAGAGTGAAGAATCTTGCTAATGTTATCTACATTTTCACattcaaattt
tcctctaaGCTGACAACGTTTTGTTAAGAACTCTAGATTTATTCTCCCTT
ATTCCCTCGTGCCTCAATAATTTTGTAACCGCTGAATGATATTTCGCTAA
TTCTTTTACCTGTGACTTGTAGCAAAAGACGGTACTGATATAGGCTATCT
GATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATAGAAATCATC
GAACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGAAACAAACAA
AACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGAGCCTTTCAG
ACGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAG
TCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCTT
TTGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGTA
TCGTCAAACATAGTAAGCGATCCATTGTATAGATTATGATCTTACTAAAA
CACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTA
AGATTATTATGGATAATAACGTGTTCTTTGATGATATCGAGCGTGCTTTA
TCACTTACTTCTTACCAACAGGCAATCGTGGAGCATCGATGGGGATGTTG
GATAGCGATGGGAACAGTAGCGACAATGGCGAAACTACATTACGAAAAAA
GAAGAATACATATATCAAGAGCAAAGAACTCATCACTTATTTTGCACAAC
TCGCTCGAAGTAAGAACCCTACCGATGCAATAGATCTCAAGATGGTGGAC
CGTCTCATTCGCAATGGTGCCAACCTCAACGTTACCGATAAATACGGTCA
AACGGTCATGCATGAAGTGGCAAAGAACTGGCACACTGACGTCGCAAAAT
ATCTCATCAAGCGGGGCGCTATTTACGACGCCAAAGACCGTTATGGGCGG
ACACCCCTTCATCTTGCATCGGCTGTGGGACATGTAGAAATGATTGATTT
TTTAGTGGGTCAAGATCACGGTaagttttatcatttttttttttttttcg
ataaaaATCTTTATGACGGTTTTAAGTCCCTTACTGAAATGTATAAGGGA
ATTTCGCTCAGACTTTAATGCGTTCTAATATATGTTATCCGATATTACAA
ATCATTTTTGTAGAATTCGACTTTCTTTCCCTTACAGTTTTGCCTGTAGT
CTATGGCCATAAAGATTTCAAGGGCCTGATTTGCTTAtcccctttaaaaa
aattctctaaataATACTATTTTTGAAGCTGACTATTCTTGTCTCGGTTT
ACTAAGGAATGATCCCTTACTTAATATCCTATTACGCCATTGCGAGGAAA
GGTCGACCAAAATCGTTGTATACCTTATTGATCGGGCGGTTTGTGGTGCT
ATCAATGGTGCACGGGTCGCGGCTTCACTAGATCCCTACTGTTTCACAAT
TAAAAGAGGACGTATCGCACTCATTCCACTAAATGACTGTANGATCCCTA
CTGTTTCACAATTAAAAGAGGACGTATCGCACTCATTCCACTAAATGACT
GTAAAAGGCTTTGATTCGTAAACTTGAACATTTTCAGAGAAACTAAAAGA
CGTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAACA
ACTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGAAC
GATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAACGG
TAATATGCTTTTTTTAGTAATAATTCTTACTTAAGAGTGATATTTGCTTG
ACTTCATTTCATATAAAACTATTACAATGTCAAAAAACAAACACTTTTTA
CCAGTGTTTTTGTCCGGTTGACACTTTTTCAAGAACGAAATTCAATTTAA
CCTTTACATGTCCCCtgtttttcaaatgaaaatggaGAACTAGGGGTTTT
GGAAGGCTAAAAAGAAATCGATTGAACGGAGGAGTTAAAAAATTAGCTTT
GTTTTGGAAATGCCCCCCCACAGACTTGTAAGACAAAATTATTCTGTACT
CAAATATTTCCTTGAGATTACTGCTGCTTCTCGATTTTCAGGACGTATTG
AAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCAGTGTACGAT
GATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGATGCCTGGTGT
AGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTGCCAATAGAA
AACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTAGCAGATGAG
GAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACGAGAACGTCA
AAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAACAGATTAAGA
AAGGTGAACTTGCCAAGTCCGTCTTGGAGGTGAGCACTCTTCTGTTAGAA
TATCTACCTCGAAACTCTTCTCTTGGACATCTGAATCTTCTTGGCTAAAT
Tccttttttttggacctacctccgggtaccccggtggaggttctataaat
taacccatgtccgttcgtccgtccgtctgtccgttcgttcgtccgtccgt
ccgtccgtctgttaccagcttttctcaggattggctcattagttttttct
gattttttgcgcaatgatgcaaaatggcaatgcccagaacgtgacggagt
ctgatttttgagaaaaaaattatttgggcaaatatgggccaaaaactacc
taaaaatagggttttttggacttggaaattccctttaaccaaataagaaa
atatagcttttctcaatgttgactcgttatttttttctggttttttacac
aatgatgcaaaatggcaatgcctaaaatgtgtcggagtctgattttcgaa
acaaaatatatttggtcaaatttgggccaaaaactgcctaaaaatagggt
tttttggactttgtgcaaaatcctgtcattacttttttctgattttttgt
acaaagatggagggcaagattctctaaagaatggctgaagtggtttttct
cggaaaattcttattcgccttaaaagacggattttcgtatttNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaaccaaataagaaaatatagcttttctcaatgttgactcat
aatttttttctgattttttgcacaatgatgcaaaatggcaatgcctaaaa
tgtgtcggggccgattttcgaaacaaaatatatttggtcaaatttgggcc
aaaaacagcttaaaaggttttttgggcctgaatggtttaagtgattttcg
tatttggggaaattcctttttaccattttacattattcaaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccattct
gaatttttgtataattattgtcacttttttcttattttcatctgatgtta
atcattaggtaggtccattcagcatgttgcttgttttttcttgaattcCT
CTAAATCTAATTTTCCCCTATTTTAAACCAAATATCTGGCTCCTTGAGGT
GTGTTTCATGGCTGATTTCCTTGAAGGCTCAAGAGGGATTGATTCAGCTG
TAAATATGTTTGGGCACTCAGAAGTTAGACAACAACCTCGTTACGATATA
GTCTCAGTCAACATCGGAAGGATGAGAATACGCTGAGGAAACGAGGTTTA
GTAGATGTGTGTTCGGGAAAATGTCACTCTCTACCATTTATGTACTATAT
TGAACGCATCCTCTCAGGTAGGGGNTGTTCGGGAAAATGTCACTCTCTAC
CATTTATGTACTATATTAAACGCATCCTCTCAGGTAGGGAATACGATTCA
CTCTCCCCTTCAAAAGATAATAACgagtttttttctttcgttCATGTTCA
GAAAGTAGTTGAGCATTGGGAAGTATCTTTAGTAGTCCATCCAGCCATTC
AATTATTAATAAAAAAGAAGTGGATGCTGATTGGTCGAAAGGCTTCAATT
TTCAGTCTCGTTCTCAACGTCATTTACGCACTTTTATGGTCGGCAGTTGG
CGTCGCAACGCCGGTAATGGGACCAACAATTTATCGGCCCTTTTCGCTGT
GGTGGCATATTACAGTGCTTGAGGTGATCGGAGTTGGCTTGACCATCTAT
TTCATGGCTACTGTGAGTATATACTCTTTTAAGTTTGTCATTGAGCTCGT
AcagaaagaaatctttttacaGTATCAcagtttttccgaaaatttcataa
tttctgCTACTTTTGTTTTCCGATATTCACGAGACATGAATTTACTGATG
TTGTCTTATGGTGtaaactaattaaatattcTATACGATTTTTCTCTCTC
GATCCTTTACAGCACATTGTGGAGATCCAGATCGACAAGCGACGTGATAA
CGCTTATGGGAAATGGGTGATCGCACAAGCAGAACGCGACCTCAAATATT
GTCATCCCAGGTGGCCTGAAGAGAGACGTCACATTGATGACACCATTGAA
GCTATtggaaatcgaaagcgaaagcgaTATTTCTCCGATGGATGGAATTG
TTTTGATTGGTTCGTTTATTTGTTGGTATGGGTCGTTATGGCAACTCGTT
TATTGAACCTCTTACTGGAGGACGATAAATTGAAATATTACCACATGCGC
ATCTTCTCTCTCACACTTATCTTCATTTGGCTTCGTCTATTACGCAGACT
GAAACCTTTCCCTTACTTCGGGCCTTTCATTATCATGCTGGGCTACGTCG
TTATAGATACCATAAAATTTCTggtcttgtttttattgatttacaTTCCG
TATTGTTGCGCTTTTTGGATGATCTTCGGCGGACCACAATTACGTCATTC
CAAATCATTTCTTCACGAGATCAATGATATGGtgtatgatatttttcaaa
tgtcattAGTGGGCGAGTTCAAATGGAAAGAATTTGTGGAGATTGATGAA
ACATTTGCACAGGTATGCTGATAAAGTACTTTTTTACTACATATTTTAGG
AACCAGTTCTGTTGTGATTACCGAAGCTTTCGATAGAAATAAATAATTAC
AAGCCGTTTCTTGGAGTGAAATAAACTTGTCAGTCTTAccgatttttaaa
ataaatgaaatcaaCGAACAACATTTTATTTCAATCCTCTCTTAGACTTT
TCACTGTCTTCTGTTTCAGCTTTTGACGGGTTCTTACATGGGTTTGACGT
CAGTGGTTGCCATCAGTTTGTACATAGCTTTGTTGGCGACCACCTTTTCT
CGGAAGTATCCACAAAGTGTAGCCATGGCGCTCATCATGCAAGCGGAAAG
ATGCGTACAGGTGGAACGAATGATCCCTAAGAAAACACACTTGAACATGA
AAGCTTTCTTCCACGAAGACTGTGCACCTTTGGTAAGAATATCTTAGAGG
AAAAGAATTATGACGgcaatttaatttggcagttgaaagatattttttac
tAGAAATCATTGTTGAATAAGAATTAAACTTGTTTTGACACCTGAAATAG
CACGAGTATGGGAAAcggttgaaaaaaatctaatttggtGGACATTTAAT
TAAAGGATGGTAAAAATAGGGCATTTTGAAGGGAACTTAATTTGGGGGAT
ATTTTATCCAATATACGGGCTTGTCTCTTTTTCTATCTGCGATCccacaa
caaaaaaatttagtcACAAAATTTAAACAGATAGCCCCGCTGCCAATGCT
TAGTTCGGATGTGATCAAGATTTGCTATGTTTCGCTAGATTTATATTATT
TCTTAACGATTCTTGTCCAGGTTGAGGAAATGAAAGGTNTGTTTCGCTag
atttatattattttttaacgATTCTTGTCCAGGTTGAGGAAATGAAAGGT
GAATCAATCTCTATAGCAACTAACAACGCGACGTTGAGCAAGTTGGATTT
CAGTCGTTGGAGAGGTCGTCATGAAAACGAAATCGATGAAGTTCGTTACA
GTATGAGAGAATTGAATAAAAAGCAAGATCGTCTCGTTCATCAGTTCAGG
TTTATTCTCGATAACCTtgacgatgatgatgatatGGTCAGTGAAATATA
GACTTTTTGGCTAAATCATCTGAAATTTGGTTTTGATAGGCGAGGTGAAT
CATCGTCAGTAAAATGAGGCAATGATTTTTCCTGAATCTTTTCATGAATA
TGGGACGGACGAAGCAATGGAATCTTGAACTTTGTGATAAAGACAATATG
GGAACTGGGGTTATCCACAGACTACAGTTTGTGATAAGAAATTCTTTTGA
CGTAGCAGTTATGGTGAAACTTTAAACATTTATATTTCAAGACACTATTT
TTGGAACTGAGGAGAGCATTCACAAAATAAGTGAAACCATTGAGCCCTTT
TTAACGGTTAAAATAGTTTGGTCTCTTTACTACAAATTACGTATTGTAGA
AGCTATGAAATtcagtactctcgggtaccttatagccggggggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008357XLOC_008357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014944-exon-sc0000201-1491911889:371099..371258TCONS_00014944-exon-sc0000201-1491911889:371099..371258Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:371099..371258TCONS_00014944-exon-sc0000201-1510915933:371099..371258Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:371099..371258TCONS_00014944-exon-sc0000201-1575043694:371099..371258Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:373369..373563TCONS_00014944-exon-sc0000201-1491911889:373369..373563Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:373369..373563TCONS_00014944-exon-sc0000201-1510915933:373369..373563Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:373369..373563TCONS_00014944-exon-sc0000201-1575043694:373369..373563Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:373871..374155TCONS_00014944-exon-sc0000201-1491911889:373871..374155Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:373871..374155TCONS_00014944-exon-sc0000201-1510915933:373871..374155Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:373871..374155TCONS_00014944-exon-sc0000201-1575043694:373871..374155Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:374370..374768TCONS_00014944-exon-sc0000201-1491911889:374370..374768Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:374370..374768TCONS_00014944-exon-sc0000201-1510915933:374370..374768Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:374370..374768TCONS_00014944-exon-sc0000201-1575043694:374370..374768Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:375336..375497TCONS_00014944-exon-sc0000201-1491911889:375336..375497Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:375336..375497TCONS_00014944-exon-sc0000201-1510915933:375336..375497Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:375336..375497TCONS_00014944-exon-sc0000201-1575043694:375336..375497Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:375840..376177TCONS_00014944-exon-sc0000201-1491911889:375840..376177Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:375840..376177TCONS_00014944-exon-sc0000201-1510915933:375840..376177Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:375840..376177TCONS_00014944-exon-sc0000201-1575043694:375840..376177Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:378850..379110TCONS_00014944-exon-sc0000201-1491911889:378850..379110Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:378850..379110TCONS_00014944-exon-sc0000201-1510915933:378850..379110Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:378850..379110TCONS_00014944-exon-sc0000201-1575043694:378850..379110Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:379311..379910TCONS_00014944-exon-sc0000201-1491911889:379311..379910Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:379311..379910TCONS_00014944-exon-sc0000201-1510915933:379311..379910Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:379311..379910TCONS_00014944-exon-sc0000201-1575043694:379311..379910Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:380118..380330TCONS_00014944-exon-sc0000201-1491911889:380118..380330Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:380118..380330TCONS_00014944-exon-sc0000201-1510915933:380118..380330Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:380118..380330TCONS_00014944-exon-sc0000201-1575043694:380118..380330Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1491911889:380781..381394TCONS_00014944-exon-sc0000201-1491911889:380781..381394Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1510915933:380781..381394TCONS_00014944-exon-sc0000201-1510915933:380781..381394Clytia hemisphaericaexon
TCONS_00014944-exon-sc0000201-1575043694:380781..381394TCONS_00014944-exon-sc0000201-1575043694:380781..381394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:371099..381394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00272331	0	0	0	0	0	0.381711	0.290527	0.597076	0	4.20834e-07	3.19025	5.09667	1.41627	2.13243	0	0.829319	5.02747e-08	1.89335	0.0354176	1.35357	0	3.02593e-07	2.14463	2.44731	0.9349	0	0	0
Blast
[Close]
BLAST of TCONS_00014944 vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4)

HSP 1 Score: 92.8189 bits (229), Expect = 9.574e-19
Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 1 
Query:  805 LKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDVAKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTKDERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIEAARYLLSKNAPCAVYDDQGVSCLSIMV----QKMPGVAFLALQQFYAEDPANRKLYCYLNYLEKKLLADEELQISWKYL 1437
            L +V  L++NGA+ +VT+  G+T +H  A+    +V + L++ GA+ DA+ R  +TPLH+AS +G  E++  L+   H    D       T LH +A+   V    VLL+ GA+ +    +  T LH+AA+ G ++ A+ LL + A        G++ L +      QK   VA L L++  +     +  Y  L+   KK     ++QI+   L
Sbjct:  444 LNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL--QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQK---VALLLLEKGASPHATAKNGYTPLHIAAKK----NQMQIASTLL 649
The following BLAST results are available for this feature:
BLAST of TCONS_00014944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK29.574e-1930.23Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4[more]
back to top