TCONS_00014942 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014942
Unique NameTCONS_00014942
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3996

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014942 ID=TCONS_00014942|Name=TCONS_00014942|organism=Clytia hemisphaerica|type=transcript|length=3996bp
tttttagataATGCGTACTACCAAAATAAAAcggaaataaaaaaactaac
taTCAAAATGATTGAGGGTGAAAACAAAGTGTTACAAGCCTTCTTGGGGA
CACTTTTGACATGGGGACTGACAGCTGCTGGTTCAGCCATGGTCTTTATC
TTTGGACATCGTCGCTTTAATGGAAAAAGAAAGATTTTGGACACAAGTTT
GGGATTCGCTGCTGGTGTGATGACGGCAGCTTCATATTGGTCATTGTTAG
CACCCGCTATCGACATGGCTGAAAAATCTGGTACCTATGGTGAAAAGGGT
GCATTTGCTCCTGTGGCTGTTGGCTTCTTTCTTGgtggtgtttttgtttt
tatatctgATATTTGTATTCCCAAATTTGCCACAGAAGACCCATCAGTAG
CTCTTGCGATGTATAATCAACGTAAAAAGTATGAAGATAAAAATAGTGAT
AATAATCCTACACTGGCATCTATCGTCAGTGAAGAGCCTTCTCGAGAAAT
AGATCAACAGTCGCCAGCAACCAGTGACCCTGAGCTGATTACATCCGTTG
AGAATGGGGATAAAGTCTCACTGACGGACTCTATACAATTGAAAATTCGA
AACCGTAAGAATGCACCCGACAAACCAGAAATGGTGCTTGAATATCAAAT
TGAATCCCGAGAAGAAAAGAAAGCAATAGAAGCTGCAGAGAGAAAAGCTC
GATATGAAAGTTGGAAAAGAATGTTGTTATTAATCATTGCAATTACTGTT
CATAATATTCCAGAGGGTTTGGCAGTGGGAGTTGCATTTGGTGCCATTGG
ATCATCTAGCTCAGCAACCTTTTCATCTGCCAGgAGTCTGGCTATCGGTA
TTGGAGTACAAAACTTCCCTGAGGGAATGGCAGTCAGTGTTCCTTTATGT
GCAGCTGGTTATTCGCCTTTGAAAAGCTTCTGGTATGGTCAACTTAGTGG
AATGGTGGAACCCATCTTCGGTGTTCTAGGTTCTTTAGTTGTGGTGGTAG
CAGAGCCGATTCTTCCATACGCTCTAGCGTTTGCGGCAGGAGCAATGATA
TATGTGGTGGTAGATGACATCATCCCTGAAGCTAACATGTGTGGTAATGG
TCGCTATGCATCCTGGGGCACAATGCTTGGATTCATCGTCATGATGTCAC
TTGATGTTGCTCTTGGTTAATCAATTGTTCctgttttcattttatattat
agattttgttcaaattgatttttctcTACAtgaaaaaacagcctttttag
gaGAATATAGTACTacaaaaagtgccctttttggctctTCCATCGGACAC
TATCCTGCCTTTTTCAAATTATGGCCTTTTATCAAGGCtttgaaaactga
tttttaagtCAAAACTTCTGACCCGCTGATTGATACCCTTGAAGACGTAT
TCTATAtatttttgttatgattttgGGTGTATCTTTAGGTTTTAGTTCTG
TTTGATCTCTTTAGGCATATAAATTAGTACTGATATTAGTCAGAAAATAT
TATAATTtcctattttattttttactttcttaATTAATATATTGTATTCT
ACAGTAgctattttgaatttcaatttttcacaactCTTTAGAAGTTCTCT
AGGTTCAATGAGAGTTAGATTTACAGAATTATATTATCATAATATTTTCA
TGTATTTAGGATATTGGTGCGGAGTGTTAGTGATGGTGTGcaatttttat
agttttttagCTTGAGAAAGCGATTTACGATAATATTTATATTATGCATG
TCAAAAAGGAACTTTGCatgttcaaattttattttttgttcacagTTTCC
CATTCACGATAAAATGACCATTGTATACGCAACCTAGTGTCCTAGTAGAC
CTTCGTTTTGATCACGTCAACTTAACGGCTGTAACGTCTTTGTAAACACT
GAGAGACTTTATTGACATTCTGTTATTCTTCCAGGTGAAAAAAACCTTAT
ACTTCAGTACTAAATAAAAGACAACACAATGTCCTCCTCAGCGTCAGGAC
AGAATGGACTTCTTGAAGACTTGCTTTCCTACAGCAATTTGGTGCATGCC
ATTGCTGGAGCCACAGGAAGTGTTGTCGGAATGTCCACATTCTATCCACT
GGATATCGTCAGAACTAGATTCCAAGCGGATGAGAAATTGAAAGCAGTGG
GTCCACTTCAAGCTATGAAGAAATTGGCTGATGAAGAAGGGGtGGAAGCG
TTGTATAGAGGACTGGGTCCCGTGTTGACCAGTTTGTATTGCTCCAACTT
TGTTTACTTCTATTCGTTCAATGGCATGAAAATGATTGCCAACTCGAACG
GGCTGAAAGCATCTGTTGGAAGGGATTTGGTGCTAGGCTACGTAGCAGGT
TGTATCAATGCTATGATGACCACTCCATTGTGGGTGACAAACACACGATT
GAAGTTGCAAGGCGTATTAAAAGACGAAGCAGGAGAACAACCTGAGAAAA
AATTCAACGGATTGATCGATGGTATGAGAAAGATAGCAAAAGAGGAGGGC
GTACACGCCTTGTGGAATGGCGTTGAGGCGTCATTTATTTTGTCAGGAAA
CCCGGCCATTCATTTTATGGTTTACGAAGCTTTGAAAAGAGTTGTGTTGA
AAGCTAGAGGAGCACGAGGCAAAACAGCTACGTTATCATCGTTCGAATCA
TTCGTTATTGGTGGGTTTGCGAAAGCAGTGGCTACCGTCATCACTTACCC
CTTACAATTGATTCAATGTCGTTTGAGGGCTAAAAGGAGAAGTAAGGACG
GGTCTGGATCAATGTCAAGTGTATTGGAAGAGGTTTTAAGGACATCTGGG
TTCAACGGCTTATACAAAGGTATGGAATCGAAATTATACCAAACTGTCCT
CACTGCATCTCTCATGTTTTTGTCATACGAAAAAATTATGGCTTTGATTT
ATACTGTCTTCAAAGTTCACCAAAAATCAAAGAAGCCTTGATACCTCTTG
GACCACCATAGAGACGGATTGGAAATATGGATTTAGAACACGTGCGGGAA
AATGATTTCAGGGCCGCACAACATTTACATACATTGAACATTAGcaggta
tcaaatttttggatttcTACCCATGCATTACATTAGATAACATGATTCAA
ATTATACCATGATTCAAATTAATTTACTTTGATTTATTGCCGATTGAGGT
ATTTGACTGGACTATCAGACAATATACCTGTATAAATCTGAAAAGAAACT
ATTCAAATCAAACTCAGACTGCACATGGGACTGCTTGAAAAATGGATCTT
CCAAATAGACTCgataatttagaaatttttatataaaaaattacaattta
cCAAACgagattatattttttgttttgttttagaattttatttatcgatt
aaaatgaggaattcttggaaataatactttttgaacaaaataacaaatta
aAGTGTGTTCTTATTCTCATTATATTACGATCAACTTTCTTTCACAACAT
TTTTTAAAAGCACAACTAAAACCTGAAAGAAATCATATTATCTGCCTGGC
TCTAGCACTATTCATATTCTCAGAATGTTATAATCACAACTTTTTAAGTC
CAATTTGAATTCAGAACGATATTATTCTCTGGTGGTGACACTTTCCCAAT
TTTCCAACACAGTGAGTGTGTTGGCAAACATTTGAAACATTATTCTATTC
ACTTCTAACGGTCTTCATTAGCAGCATCATTTTTCGGCAGATATGGAGTC
CAGCTCGTCTTGTAATTCAACTATTGATTGTTTGTGTTGTTGGCGCCAAA
ACTTCTCAAACAAATGGACCTAAGTGAATAAAATAAACGAATAAACTTCA
TATTCATCACGGAGAAGAGACCGAAGACCTTTGGGTATTTGTGAAGCTTC
TATTATACTGTGTATCGGTGTCAGCTGTTTACTAAATACCGCAGGTAGCG
TGCTTCGTGTCGCTACGAACTGAAATGAAGTTATTCTATTGGTCAGCTAT
TGGCTAGAAATGACGTAAGAATTTCGTTACGGAGCGGGACCGTAGC
Run BLAST on NCBI

transcript from alignment at sc0000201:355556..365272+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014942 ID=TCONS_00014942|Name=TCONS_00014942|organism=Clytia hemisphaerica|type=transcript|length=9717bp|location=Sequence derived from alignment at sc0000201:355556..365272+ (Clytia hemisphaerica)
tttttagataATGCGTACTACCAAAATAAAAcggaaataaaaaaactaac
taTCAAAATGATTGAGGGTGAAAACAAAGTGTTACAAGCCTTCTTGGGGA
CACTTTTGACATGGGGACTGACAGCTGCTGGTTCAGCCATGGTCTTTATC
TTTGGACATCGTCGCTTTAATGGAAAAGTATaacaatttttctcatcttg
tACCTGTGTCGCGTTCAATTTAATTACGAAAAAAGATTCTTGTCCTTCCA
TAACCGGTGAGGAAAGAATAACTTTTCTTATTCATAATCCTTTCTTATCA
ATTTTTAGAGAAAGATTTTGGACACAAGTTTGGGATTCGCTGCTGGTGTA
AGTATATGTTTTCATATTATACATATAATTTGCTTTTCATATATATTCTC
AAgagtattttcaagaattttgatctttataaatatctttaatTAATTGG
TGGTTGAGCTGTATCAATTAACATCATGTCCCTACCTTATCGCCACTATT
ACATTAACTTGAATGttaaattcttctttttatccTCTTATTCTAAAGCA
CAAAGATCAAAAGATAAACTTAATTTCCTTAGGTGATGACGGCAGCTTCA
TATTGGTCATTGTTAGCACCCGCTATCGACATGGCTGAAAAATCTGGTAC
CTATGGTGAAAAGGGTGCATTTGCTCCTGTGGCTGTTGGCTTCTTTCTTG
gtggtgtttttgtttttatatctgATATTTGTATTCCCAAATTTGTAAGT
TTGTTCAtttaactaactaactaactaattTAACTATCTAACTAActgtt
cattaaaaaaaatgtttttcttgttgattttaagactttttagATATAAC
TCTTTTCCCGGTcgctaattttttcaaatagtcTTGTCGTCTTTTAACCT
TTTTCGAAACAACCTCCAGGAGAGGAAACTGCCATGGTATCTCTAATTCA
GCTTTCACTTCTTTCTAAAAGGCCACAGAAGACCCATCAGTAGCTCTTGC
GATGTATAATCAACGTAAAAAGTATGAAGATAAAAATAGTGATAATAATC
CTACACTGGCATCTATCGTCAGTGAAGAGCCTTCTCGAGAAATAGATCAA
CAGTCGCCAGCAACCAGTGACCCTGAGCTGATTACATCCGTTGAGAATGG
GGATAAAGTCTCACTGACGGACTCTATACAATTGAAAATTCGAAACCGTA
AGAATGCACCCGACAAACCAGAAATGGTGCTTGAATATCAAATTGAATCC
CGAGAAGAAAAGAAAGCAATAGAAGCTGCAGAGAGAAAAGCTCGATATGA
AAGTTGGAAAAGAATGTTGTTATTAATCATTGCAATTACTGTTCATAATA
TTCCAGGTACTGCTAATTATCATGTCTTACCCTCTTTAGCACTTCATCTT
CGTTCAATAATTCTTTTCCGCGCAGGATCTTTCTTAAACAGCACACAAAT
TAACCATAAGTTTCAAGGTTCACAGCGAAAATACCTTAACTTTAGCCTGG
TGATTGCTAAAGATATGACATCATTGACTTTGACACTGGCTCCATGACTA
TTAATGATTATTACGGTTGTTTATCTTAGAGGGTTTGGCAGTGGGAGTTG
CATTTGGTGCCATTGGATCATCTAGCTCAGCAACCTTTTCATCTGCCAGG
TATGTTCAGCCAGCTTTGGCATTTTACCGTATCTTTTCTAAAAGTCCTAA
ATTGTTAAGTCTACAAATGGCCATTTTATATGTTAAAGTCAAGTGAgcca
ttaaaaaatgttttaatttgaatttttgtataATGATGAATCTTCTGCTT
ATCTTCGATTTCCATTGTCTGTTTCATATAtaagtttgttttcatttaag
gAGTCTGGCTATCGGTATTGGAGTACAAAACTTCCCTGAGGGAATGGCAG
TCAGTGTTCCTTTATGTGCAGCTGGTTATTCGCCTTTGAAAAGCTTCTGG
TGAGCGACCTTCCATTATGATCTATGAGTTGTGACTTTGACATTCGCACA
AAAATGTTGAAGTgaaatgtttcaaaatatttccttttctCTTTTCAGGT
ATGGTCAACTTAGTGGAATGGTGGAACCCATCTTCGGTGTTCTAGGTTCT
TTAGTTGTGGTGGTAAGAAAGTATTTAATTCATTCCGTGCTAGTTCATCG
CAAAAACGTTTTATAATTTGTTTTATGACAAGAATCGATTATTTCAGTAC
TCGTTTTTATTTAATTGGTGTTTATTACTTTTTATAACTGCTAGAGGTAC
CATAAAATGTTGTTTCATTATGCAGGTAGCAGAGCCGATTCTTCCATACG
CTCTAGCGTTTGCGGCAGGAGCAATGATATATGTGGTGGTAGATGACATC
ATCCCTGAAGCTAACATGTGGTAAGACACCATTTCCCAGTTTTATTTTCT
TGtacttttgtttatctaatcccaGCATCTTCCTTCACTGGACTTCCTCT
CTCTTGTTGTGAGCTCTTAAAAAGTTATTTGTCCCATCATATGTATGTCA
AATCGATACTAACCCTATTATCTCATTTTCATGACGTCGAAAATTTCTTG
TCATTTACGAAACTTAACAGAACGCTTGAAATTGATCATTATGACCTCAT
TTCATACTTCATCATTTATAGATGATTTAATTTTTGTTCCTCATAGTGGT
AATGGTCGCTATGCATCCTGGGGCACAATGCTTGGATTCATCGTCATGAT
GTCACTTGATGTTGCTCTTGGTTAATCAATTGTTCctgttttcattttat
attatagattttgttcaaattgatttttctcTACAtgaaaaaacagcctt
tttaggaGAATATAGTACTacaaaaagtgccctttttggctctTCCATCG
GACACTATCCTGCCTTTTTCAAATTATGGCCTTTTATCAAGGCtttgaaa
actgatttttaagtCAAAACTTCTGACCCGCTGATTGATACCCTTGAAGA
CGTATTCTATAtatttttgttatgattttgGGTGTATCTTTAGGTTTTAG
TTCTGTTTGATCTCTTTAGGCATATAAATTAGTACTGATATTAGTCAGAA
AATATTATAATTtcctattttattttttactttcttaATTAATATATTGT
ATTCTACAGTAgctattttgaatttcaatttttcacaactCTTTAGAAGT
TCTCTAGGTTCAATGAGAGTTAGATTTACAGAATTATATTATCATAATAT
TTTCATGTATTTAGGATATTGGTGCGGAGTGTTAGTGATGGTGTGcaatt
tttatagttttttagCTTGAGAAAGCGATTTACGATAATATTTATATTAT
GCATGTCAAAAAGGAACTTTGCatgttcaaattttattttttgttcacag
TTTCCCATTCACGATAAAATGACCATTGTATACGCAACCTAGTGTCCTAG
TAGACCTTCGTTTTGATCACGTCAACTTAACGGCTGTAACGTCTTTGTAA
ACACTGAGAGACTTTATTGACATTCTGTTATTCTTCCAGGTGAAAAAAAC
CTTATACTTCAGTACTAAATAAAAGACAACACAATGTCCTCCTCAGCGTC
AGGACAGAATGGACTTCTTGAAGACTTGCTTTCCTACAGCAATTTGGTGC
ATGCCATTGCTGGAGCCACAGGAAGTGTTGTCGGAATGTCCACATTCTAT
CCACTGGATATCGTCAGAACTAGATTCCAAGGTATGTTCATCGATGAATG
ATTATCTAgaatatgcaccactgcaacgaCTTGAATTGTGTAATATCATA
TCATGCAACTTTTTAGATTTAGGTGACCCTTTTCCAGTGTGATACTGACG
AATTGGATAAAAAATTTGATTCTGAAAGACTTTGAAGACTTTTTACATGC
TGATTCGTGATCATTTTCTAGAAGTATTGATTTCCTGATATGATAGTCTG
TAAAGAATGTTTAATGTGCACGAGGACAGTTTATGATGGAAAAAAGAAAC
TGGTGCTCCGAAGGAATTCTTGGTTAGAATCGTTCGGCCCAACAACTTAA
GCATATGATGGtaatgaatttcttttctttccacTTATTCAGCGGATGAG
AAATTGAAAGCAGTGGGTCCACTTCAAGCTATGAAGAAATTGGCTGATGA
AGAAGGGGtgtaagaaaaaatctttttagacctaccccggtggggtggag
gtcctataaattcacctctgtccgttcgtccgtccgccCGTcctcgttac
cagcttttctcgagattgaatcataggaatcatttgatttttggtacaaa
tgtgcaaaacggtggtggccaaaatgtgacggagcccgattttcgaaaca
aaaaattttgggcaaatttgggctttgtgaaaaattggatcattaaattt
ttttgattttttgcatgaaggtaaaaatcataggtaaaagatggctctag
cagatttttgcaaaaaaatttatttggcttaaaaaacgcatgtttatcta
taagaatcactattaataagcatacattcatgttcttagtcaaattactc
aatttttttatgagatagatgttttttttctcatgaGGGCTTACCTTTGA
AGCAATTATGTGTTTAGACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNtaagaaacaaacgactaattttaat
aaatcgtcactatttgtgttctgaatgattgtttaacgttcatgctcacg
tagatatcaattatatatgtgttaaacgCATAACCaagtaggtccataaa
agtatcacttgttatttttttttttaatatttcaagAATACTTAAGTTAA
AGGAGACAGGTCTATCAATCCCATAGTACTGGAGTTTGTAGCTTTTGGAG
TCACCTTTAGAACCTAAGTGTGATATCATATGTCCTAACTCGGAACTAAA
AGATGACACATACTCTCTTAGTTAGATCTTGTTGCAACTTTCAACCAAAA
AATCATTTCCACCCCTAATTATctgcaagtgaaaaaaaaaaaggatttca
cCTGAACTAAattctccaattttttttcgaatgcGAAATTTTTATTCTGC
TATCTGAATTATTTCCAAGCCTCTTTTTTAGAATAATTCATTTCTTTTTC
TCAGGGAAGCGTTGTATAGAGGACTGGGTCCCGTGTTGACCAGTTTGTAT
TGCTCCAACTTTGTTTACTTCTATTCGTTCAATGGCATGAAAATGATTGC
CAACTCGAACGGGCTGAAAGCATCTGTTGGAAGGGATTTGGTGCTAGGCT
ACGTAGCAGGTTCGTAGAAAATTCGGCTATAACGATTCCAAATTAAGTTT
CGAGGGTCGTATAATAATTGCAAGCGGTTACTTTTACAGAAGAATCCGTT
TTCAACAGAAATAACAGAAAACagaaagaatatttaaattttaaatagtC
TATTACGAAATGGAATGTCAGACTCAAATGGTGTGGGCCTTTTTCTGTAT
GTAAAATGTGATTCCCTTACGCTATAACTCATGTTTGCTTGGATCCTTAA
CTTTGAGATAACTCTGACCCTTTCTTGGCTAGGTTGTATCAATGCTATGA
TGACCACTCCATTGTGGGTGACAAACACACGATTGAAGTTGCAAGGCGTA
TTAAAAGACGAAGCAGGAGAACAACCTGAGAAAAAATTCAACGGATTGAT
CGGTAATTCTAGATATTACCTTCTTATCTTTGTTGGGCGTCTTATCAGAT
TACCtcattacacaaatattactaggcaagtattcgacggccttgaaatt
tgcacgatctgaaattaacacgaatttttctgctttttcaaggaaacagc
ggctggttttgattaagagggtttttattggcatgaaatatttcaattcg
tgtttataaaatgactagtaatattcgtgtaataggGTACAATTATATGA
AAGATGGATTTTAGTTTCTTTTTGCACATCATATTTACCAGTGTGGTCTA
attattaacatatttttttatttttctacagATGGTATGAGAAAGATAGC
AAAAGAGGAGGGCGTACACGCCTTGTGGAATGGCGTTGAGGCGTCATTTA
TTTTGTCAGGAAACCCGGCCATTCATTTTATGGTTTACGAAGCTTTGAAA
AGAGTTGTGTTGAAAGCTAGAGGAGCACGAGGCAAAACAGCTGTAAGTTC
TTCTCTGTAAATTTCTATCTCCTTAGCAACTatttgcgaaagtttcttcA
AAGATGTCCCACATTAGATATAATTGCGGTGGTCGGTTTTACATCTCACA
TTATCTTGTACAGGGATACTTGCcaactttcattctatttcaaTCTTcct
tattttttctttatttgaaaaGATGACAAGTGCATTACCAATTATATACT
ACATAACACTACTAACATAGATATAATAGtcccttattacacgaatatta
ctagtcatttaacacgaattgaaaaactCAGTGTtgataaaaaccccctt
aattaaaaccagcctgGTGATGTCCTTGAACAAGCagataaaattcgtgt
taattttttgcgtgttaatttcaaggtcGTTGAATACttttgcctagtaa
tattcgtgtaataaggtaaagTGGTATctccagaggtactagactatgtt
aaaagaaacaaaaataatactGGAAAAAATAATGTAGGGAGCTATGGTTG
TTGAGTCAAGACTAGAACAAAGCTTTCCTTTTTTTCACAGACGTTATCAT
CGTTCGAATCATTCGTTATTGGTGGGTTTGCGAAAGCAGTGGCTACCGTC
ATCACTTACCCCTTACAATTGATTCAATGTCGTTTGAGGGTAAGTTTCTC
TTCGTCTATCATTTTGGAAAACTCGACCTGTCTGCTAATTAGTCAAGGGA
AAATGGCCTGAAAACCCACCTTGGACGGAACTTTGTACATTAGGGAATGA
AGCCCAAAATTCGGTAAAATATGAAAGGTGAAAATGGGATGGTTCGAGAT
GATTTAATTTAATTATTCAGTAAAACCCAGACGTTGAATCGGCAGAAAAT
TCTGTACATACAACTCTTTCATTCGGATGTCGTATTTTACTTTTGTAGGC
TAAAAGGAGAAGTAAGGACGGGTCTGGATCAATGTCAAGTGTATTGGAAG
AGGTTTTAAGgtaagtcttttttatattctgCATTTTTAATAAAGAAATG
TATGCAATCTGTATCATTGTCAATATTTTCCGAGAATCTGACAAACTCGA
GCTCCCATCGTGACACGTCGAATTCTGGGATGttattcattattttgaat
ttttggacctaccccggtggaggtcctataaattaatgtgtgtttgttcg
ttcgtccgttcgtccgtccgtccgttcgttcgtctgttaccaacttttct
caggattgaatcatagtaattttttgatttttggtacaaaggtgcaaaat
ggtggtggccaaaatgtgacggagcccgattttcgaaaaagaaatttttt
ggccaaatttgggccaaaaaacggcaaaaaaatgggttttttggacttcg
tgaaatattggataattatttttttctgattttttgcatgaaagtatgta
aaagatggctcaagcagattttggtaaaaaaaagattttttcggctcgaa
aaacgcatctttatctataagaatcactattaataagcatacatcaatgt
tcttagccgaaTTACTAGAGATAGATGTTGTTTTTTTGCTCACGAAGTCT
TGAATATGaaagaatatttcaagagcatgaaattttggtttctaaacgtt
tttttataagaaacaaacgactaatttaaatagatcgtcactatttgtgt
tctgattgtttaatggtcacgtcacgtagatatcaattataaatgtgtta
aatgcataaccaggtaggtccacaaaagtatcacttgttttgtcttcttt
ttttgctgCAGGACATCTGGGTTCAACGGCTTATACAAAGGTATGGAATC
GAAATTATACCAAACTGTCCTCACTGCATCTCTCATGTTTTTGTCATACG
AAAAAATTATGGCTTTGATTTATACTGTCTTCAAAGTTCACCAAAAATCA
AAGAAGCCTTGATACCTCTTGGACCACCATAGAGACGGATTGGAAATATG
GATTTAGAACACGTGCGGGAAAATGATTTCAGGGCCGCACAACATTTACA
TACATTGAACATTAGcaggtatcaaatttttggatttcTACCCATGCATT
ACATTAGATAACATGATTCAAATTATACCATGATTCAAATTAATTTACTT
TGATTTATTGCCGATTGAGGTATTTGACTGGACTATCAGACAATATACCT
GTATAAATCTGAAAAGAAACTATTCAAATCAAACTCAGACTGCACATGGG
ACTGCTTGAAAAATGGATCTTCCAAATAGACTCgataatttagaaatttt
tatataaaaaattacaatttacCAAACgagattatattttttgttttgtt
ttagaattttatttatcgattaaaatgaggaattcttggaaataatactt
tttgaacaaaataacaaattaaAGTGTGTTCTTATTCTCATTATATTACG
ATCAACTTTCTTTCACAACATTTTTTAAAAGCACAACTAAAACCTGAAAG
AAATCATATTATCTGCCTGGCTCTAGCACTATTCATATTCTCAGAATGTT
ATAATCACAACTTTTTAAGTCCAATTTGAATTCAGAACGATATTATTCTC
TGGTGGTGACACTTTCCCAATTTTCCAACACAGTGAGTGTGTTGGCAAAC
ATTTGAAACATTATTCTATTCACTTCTAACGGTCTTCATTAGCAGCATCA
TTTTTCGGCAGATATGGAGTCCAGCTCGTCTTGTAATTCAACTATTGATT
GTTTGTGTTGTTGGCGCCAAAACTTCTCAAACAAATGGACCTAAGTGAAT
AAAATAAACGAATAAACTTCATATTCATCACGGAGAAGAGACCGAAGACC
TTTGGGTATTTGTGAAGCTTCTATTATACTGTGTATCGGTGTCAGCTGTT
TACTAAATACCGCAGGTAGCGTGCTTCGTGTCGCTACGAACTGAAATGAA
GTTATTCTATTGGTCAGCTATTGGCTAGAAATGACGTAAGAATTTCGTTA
CGGAGCGGGACCGTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008356XLOC_008356Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014942-exon-sc0000201-1491911889:355556..355732TCONS_00014942-exon-sc0000201-1491911889:355556..355732Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:355556..355732TCONS_00014942-exon-sc0000201-1510915933:355556..355732Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:355556..355732TCONS_00014942-exon-sc0000201-1575043694:355556..355732Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:355864..355902TCONS_00014942-exon-sc0000201-1491911889:355864..355902Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:355864..355902TCONS_00014942-exon-sc0000201-1510915933:355864..355902Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:355864..355902TCONS_00014942-exon-sc0000201-1575043694:355864..355902Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:356138..356299TCONS_00014942-exon-sc0000201-1491911889:356138..356299Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:356138..356299TCONS_00014942-exon-sc0000201-1510915933:356138..356299Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:356138..356299TCONS_00014942-exon-sc0000201-1575043694:356138..356299Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:356527..356911TCONS_00014942-exon-sc0000201-1491911889:356527..356911Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:356527..356911TCONS_00014942-exon-sc0000201-1510915933:356527..356911Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:356527..356911TCONS_00014942-exon-sc0000201-1575043694:356527..356911Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:357135..357204TCONS_00014942-exon-sc0000201-1491911889:357135..357204Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:357135..357204TCONS_00014942-exon-sc0000201-1510915933:357135..357204Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:357135..357204TCONS_00014942-exon-sc0000201-1575043694:357135..357204Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:357406..357504TCONS_00014942-exon-sc0000201-1491911889:357406..357504Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:357406..357504TCONS_00014942-exon-sc0000201-1510915933:357406..357504Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:357406..357504TCONS_00014942-exon-sc0000201-1575043694:357406..357504Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:357604..357667TCONS_00014942-exon-sc0000201-1491911889:357604..357667Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:357604..357667TCONS_00014942-exon-sc0000201-1510915933:357604..357667Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:357604..357667TCONS_00014942-exon-sc0000201-1575043694:357604..357667Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:357831..357925TCONS_00014942-exon-sc0000201-1491911889:357831..357925Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:357831..357925TCONS_00014942-exon-sc0000201-1510915933:357831..357925Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:357831..357925TCONS_00014942-exon-sc0000201-1575043694:357831..357925Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:358202..359236TCONS_00014942-exon-sc0000201-1491911889:358202..359236Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:358202..359236TCONS_00014942-exon-sc0000201-1510915933:358202..359236Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:358202..359236TCONS_00014942-exon-sc0000201-1575043694:358202..359236Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:359598..359664TCONS_00014942-exon-sc0000201-1491911889:359598..359664Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:359598..359664TCONS_00014942-exon-sc0000201-1510915933:359598..359664Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:359598..359664TCONS_00014942-exon-sc0000201-1575043694:359598..359664Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:361260..361414TCONS_00014942-exon-sc0000201-1491911889:361260..361414Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:361260..361414TCONS_00014942-exon-sc0000201-1510915933:361260..361414Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:361260..361414TCONS_00014942-exon-sc0000201-1575043694:361260..361414Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:361688..361807TCONS_00014942-exon-sc0000201-1491911889:361688..361807Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:361688..361807TCONS_00014942-exon-sc0000201-1510915933:361688..361807Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:361688..361807TCONS_00014942-exon-sc0000201-1575043694:361688..361807Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:362137..362297TCONS_00014942-exon-sc0000201-1491911889:362137..362297Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:362137..362297TCONS_00014942-exon-sc0000201-1510915933:362137..362297Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:362137..362297TCONS_00014942-exon-sc0000201-1575043694:362137..362297Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:362846..362944TCONS_00014942-exon-sc0000201-1491911889:362846..362944Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:362846..362944TCONS_00014942-exon-sc0000201-1510915933:362846..362944Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:362846..362944TCONS_00014942-exon-sc0000201-1575043694:362846..362944Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:363204..363265TCONS_00014942-exon-sc0000201-1491911889:363204..363265Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:363204..363265TCONS_00014942-exon-sc0000201-1510915933:363204..363265Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:363204..363265TCONS_00014942-exon-sc0000201-1575043694:363204..363265Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1491911889:364067..365272TCONS_00014942-exon-sc0000201-1491911889:364067..365272Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1510915933:364067..365272TCONS_00014942-exon-sc0000201-1510915933:364067..365272Clytia hemisphaericaexon
TCONS_00014942-exon-sc0000201-1575043694:364067..365272TCONS_00014942-exon-sc0000201-1575043694:364067..365272Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:355556..365272 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.2207	37.2143	17.3153	12.9451	13.7454	10.552	21.7783	22.92	22.5094	24.1958	33.1762	27.1746	56.476	59.6785	47.5965	56.074	36.3342	44.5177	28.3053	27.7073	37.0489	37.3676	46.7342	44.0095	0	0	32.1266	30.0719	42.7963	41.7063
Blast
[Close]
BLAST of TCONS_00014942 vs. Swiss-Prot (Human)
Match: PM34 (Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.551e-85
Identity = 150/314 (47.77%), Postives = 200/314 (63.69%), Query Frame = 2 
Query: 2012 LEDLLSYSNLVHAIAGATGSVVGMSTFYPLDIVRTRFQADEKLKAVGPLQAMKKLADEEGVEALYRGLGPVLTSLYCSNFVYFYSFNGMKMIANSNGLKASVGRDLVLGYVAGCINAMMTTPLWVTNTRLKLQGVLKDEAGEQPEKKFNGLIDGMRKIAKEEGVHALWNGVEASFILSGNPAIHFMVYEALKRVVLKARGARGKTATLSSFESFVIGGFAKAVATVITYPLQLIQCRLRAKRRSKDGS----GSMSSV---LEEVLRTSGFNGLYKGMESKLYQTVLTASLMFLSYEKIMALIYTVF---KVHQ 2923
            +  +LSY +LVHA+AGA GSV  M+ F+PLD  R R Q DEK K+      + ++  EEG+ A YRG  PV++SL CSNFVYFY+FN +K +    G  ++ G+DLV+G+VAG +N ++TTPLWV NTRLKLQG  K    +     + G+ID   +I ++EG+ ALWNG   S +L  NPAI FM YE LKR +LK R        LSS + F+IG  AKA+AT +TYPLQ +Q  LR  R   +      GS+ ++   L + +R  G  GLYKG+E+KL QTVLTA+LMFL YEK+ A  +TV    + HQ
Sbjct:    1 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALW-VKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGA-KFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKR------MKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQ 306
The following BLAST results are available for this feature:
BLAST of TCONS_00014942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PM344.551e-8547.77Peroxisomal membrane protein PMP34 OS=Homo sapiens... [more]
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