TCONS_00014832 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014832
Unique NameTCONS_00014832
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length463

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014832 ID=TCONS_00014832|Name=TCONS_00014832|organism=Clytia hemisphaerica|type=transcript|length=463bp
ATCGTTAATTAGTTGTCAGTGAGGAAAacatcttttttcaatcagtgatt
ccaaccTTCCTGTTAATTTTTAAGAAGGGTATCGGAATTTtacgagggat
gtcgacattcgACCGGGGTTCATCgtcatttgaaagatttttcgtTCTGT
GATACACTGGTCTGTTGGACACTAAATTCTGAACTATGTAATATCTAAGC
TTTAAATTATAGATCACCAGGCTTTGATATCTGAGCAGCCTCGAAAgcaa
cttttctttttattgatgAGGCGAGTTCCTCGGTGAAGATGAagcatttt
attttgaatatttcgaaATGCTGTATTAAGCTTATCTGTTGTTTTTAAAA
CCAAATTTTAGAggctttttattgtattgtgTCATTAAACAGAGAGGTTT
GAAACTTTACCAACGATGAATTATTCAGTAATTTCCAACAAAAAgctcaa
ataaatatttttg
Run BLAST on NCBI

transcript from alignment at sc0000198:339514..339976

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014832 ID=TCONS_00014832|Name=TCONS_00014832|organism=Clytia hemisphaerica|type=transcript|length=463bp|location=Sequence derived from alignment at sc0000198:339514..339976 (Clytia hemisphaerica)
caaaaatatttatttgagcTTTTTGTTGGAAATTACTGAATAATTCATCG
TTGGTAAAGTTTCAAACCTCTCTGTTTAATGAcacaatacaataaaaagc
cTCTAAAATTTGGTTTTAAAAACAACAGATAAGCTTAATACAGCATttcg
aaatattcaaaataaaatgctTCATCTTCACCGAGGAACTCGCCTcatca
ataaaaagaaaagttgcTTTCGAGGCTGCTCAGATATCAAAGCCTGGTGA
TCTATAATTTAAAGCTTAGATATTACATAGTTCAGAATTTAGTGTCCAAC
AGACCAGTGTATCACAGAacgaaaaatctttcaaatgacGATGAACCCCG
GTcgaatgtcgacatccctcgtaAAATTCCGATACCCTTCTTAAAAATTA
ACAGGAAggttggaatcactgattgaaaaaagatgtTTTCCTCACTGACA
ACTAATTAACGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008302XLOC_008302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014832-exon-sc0000198-1491911889:339514..339976TCONS_00014832-exon-sc0000198-1491911889:339514..339976Clytia hemisphaericaexon
TCONS_00014832-exon-sc0000198-1510915933:339514..339976TCONS_00014832-exon-sc0000198-1510915933:339514..339976Clytia hemisphaericaexon
TCONS_00014832-exon-sc0000198-1575043694:339514..339976TCONS_00014832-exon-sc0000198-1575043694:339514..339976Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:339514..339976 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.359151	0.168117	0.117702	0	0.141511	0.465118	0.371577	0.0964716	0.555189	0.170229	0.419417	0.214945	0.296958	0.310745	0.270094	0.395227	0	0.1456	0.449892	0.669197	0	0	0.465089	0.789753
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014832 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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