TCONS_00014754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014754
Unique NameTCONS_00014754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length332

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014754 ID=TCONS_00014754|Name=TCONS_00014754|organism=Clytia hemisphaerica|type=transcript|length=332bp
TGACTGTATCAAATCTCTTAGTTCAGTTGACACTTTGTTTCTTAGTTGCG
TCATAGGGaaagctttgtttttttttagtttgtatctttgaaagacccca
tcggattaaGGCAGgactgtcggatttaggaccactcacggtagtcCGTT
ACCTGCCTGTTGTCGACATGGATTTTCCGTAACAATTTACGTAACATATA
CAAGATTTTTAATaggaaaattttggattttccaaTACTTGGCAAGAGaa
tagagcaaattttatggGTTTTCCAATACTTAGCAAGAAAATAGggcaaa
ttttatggattttccgaTACATGTGACTAAAT
Run BLAST on NCBI

transcript from alignment at sc0000197:354894..355225

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014754 ID=TCONS_00014754|Name=TCONS_00014754|organism=Clytia hemisphaerica|type=transcript|length=332bp|location=Sequence derived from alignment at sc0000197:354894..355225 (Clytia hemisphaerica)
ATTTAGTCACATGTAtcggaaaatccataaaatttgccCTATTTTCTTGC
TAAGTATTGGAAAACccataaaatttgctctattCTCTTGCCAAGTAttg
gaaaatccaaaattttcctATTAAAAATCTTGTATATGTTACGTAAATTG
TTACGGAAAATCCATGTCGACAACAGGCAGGTAACGgactaccgtgagtg
gtcctaaatccgacagtcCTGCCttaatccgatggggtctttcaaagata
caaactaaaaaaaaacaaagctttCCCTATGACGCAACTAAGAAACAAAG
TGTCAACTGAACTAAGAGATTTGATACAGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008258XLOC_008258Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014754-exon-sc0000197-1491911889:354894..355225TCONS_00014754-exon-sc0000197-1491911889:354894..355225Clytia hemisphaericaexon
TCONS_00014754-exon-sc0000197-1510915933:354894..355225TCONS_00014754-exon-sc0000197-1510915933:354894..355225Clytia hemisphaericaexon
TCONS_00014754-exon-sc0000197-1575043694:354894..355225TCONS_00014754-exon-sc0000197-1575043694:354894..355225Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:354894..355225 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57686	0.565285	1.63288	2.23652	0.777929	0.307365	1.48329	1.04148	0.486109	1.81276	4.09106	2.8975	1.34278	1.99213	0.818901	0.527284	1.29914	1.33575	1.83965	1.28337	2.78871	2.04035	0.992125	1.20265	1.85805	0	1.59058	2.5325	1.92081	3.58784
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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