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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014744 ID=TCONS_00014744|Name=TCONS_00014744|organism=Clytia hemisphaerica|type=transcript|length=1141bp
GATTTTCAGAAATGTATTATAATGCTGACTAAATACAGGGGTGGAAAGGG
TAtacaaaattttacattttagtaATATAGGCTATTCATATTTTCTGTTA
TTTTCAAACCAGGTAAAGTATTTACAAACTTACTAAAAATTAGAtcaaca
cgtttttttataagaacatcaaaagttGTTGAAGCCTtcgaaaatattct
taacgtgttcttataTTCGCCATGATGTTAGTTATGCTGTTAGTGTTAGT
ATTCGTTCATTTTCCTAGGATATCGGTTGTTTTAAAGTCCACAAAGCCAT
AAAATGTTTAACTTGTTCCTAATATGTTGGCCAtttaagccttatgttct
tatatatctgttcttataaaaaatatgtattaCTGAATAAACTAGgtaaa
aaaatgatcaaaagatCATTATGGTTATTTCGAAGTCATACTGaagtcag
tttttttatttttcttaccaGAAGCACaacatttctttttaaaataatag
CAAAATGAAGAACAAATTGGAAATGCGACGAGACCAGCAATCACGATTCC
TATGATCGCCCAATCTGAAAGTCCAGCCGAACGCCCTGCACCACTGGAAC
TTCCGCCAcgagatgatgatgatgatcttCTTGATGATCGACCACCGCCT
CTCGATCTTCCACCGCACGGTCTAGGATCAGGTGAGCGGCGTTCACGAAT
CAAAATTTCATCTTCATCTGAGTCAATACGAATTTTTTCGTTCAGAACTA
CTTTCTCATCTTTTCGTTGTATAGGTTCTCCAGTTACGGTTATCACGAAT
GAAAACTCATTAAAAATCTGACTTAATACAAACACGGTCATCACGCAAAT
CACCACTTTGTTCATGATTTTGCCCAAATATAAATCTTCtctgcaaaaat
ttgaaatggcGCGTCTTTGAATTTTAAGGATAAAACATAAACTACACCAA
TAACCTTTGTTGGGGGGGCTTTTTATATGAAGATATCAGTGGATCGGATT
TCAAGATTATTCGAAACATCTTTCCAAGCTCGTTTCAACATGTCAAAAAA
GTATTTTCCCTCCTTTCTAAAGCACTTTCGATGAGTCATCAAGGAATACT
CTAAAAATAGATTATACTTTTCCCTTAAGGCATGTTTTGGC Run BLAST on NCBI protein sequence of TCONS_00014744-protein >TCONS_00014744-protein ID=TCONS_00014744-protein|Name=TCONS_00014744-protein|organism=Clytia hemisphaerica|type=polypeptide|length=146bp
MNKVVICVMTVFVLSQIFNEFSFVITVTGEPIQRKDEKVVLNEKIRIDSD
EDEILIRERRSPDPRPCGGRSRGGGRSSRRSSSSSRGGSSSGAGRSAGLS
DWAIIGIVIAGLVAFPICSSFCYYFKKKCCASGKKNKKTDFSMTSK Run BLAST on NCBI transcript from alignment at sc0000197:11206..12346 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014744 ID=TCONS_00014744|Name=TCONS_00014744|organism=Clytia hemisphaerica|type=transcript|length=1141bp|location=Sequence derived from alignment at sc0000197:11206..12346 (Clytia hemisphaerica)
GCCAAAACATGCCTTAAGGGAAAAGTATAATCTATTTTTAGAGTATTCCT
TGATGACTCATCGAAAGTGCTTTAGAAAGGAGGGAAAATACTTTTTTGAC
ATGTTGAAACGAGCTTGGAAAGATGTTTCGAATAATCTTGAAATCCGATC
CACTGATATCTTCATATAAAAAGCCCCCCCAACAAAGGTTATTGGTGTAG
TTTATGTTTTATCCTTAAAATTCAAAGACGCgccatttcaaatttttgca
gaGAAGATTTATATTTGGGCAAAATCATGAACAAAGTGGTGATTTGCGTG
ATGACCGTGTTTGTATTAAGTCAGATTTTTAATGAGTTTTCATTCGTGAT
AACCGTAACTGGAGAACCTATACAACGAAAAGATGAGAAAGTAGTTCTGA
ACGAAAAAATTCGTATTGACTCAGATGAAGATGAAATTTTGATTCGTGAA
CGCCGCTCACCTGATCCTAGACCGTGCGGTGGAAGATCGAGAGGCGGTGG
TCGATCATCAAGaagatcatcatcatcatctcgTGGCGGAAGTTCCAGTG
GTGCAGGGCGTTCGGCTGGACTTTCAGATTGGGCGATCATAGGAATCGTG
ATTGCTGGTCTCGTCGCATTTCCAATTTGTTCTTCATTTTGctattattt
taaaaagaaatgttGTGCTTCtggtaagaaaaataaaaaaactgacttCA
GTATGACTTCGAAATAACCATAATGatcttttgatcatttttttacCTAG
TTTATTCAGtaatacatattttttataagaacagatatataagaacataa
ggcttaaaTGGCCAACATATTAGGAACAAGTTAAACATTTTATGGCTTTG
TGGACTTTAAAACAACCGATATCCTAGGAAAATGAACGAATACTAACACT
AACAGCATAACTAACATCATGGCGAAtataagaacacgttaagaatattt
tcgaAGGCTTCAACaacttttgatgttcttataaaaaaacgtgttgaTCT
AATTTTTAGTAAGTTTGTAAATACTTTACCTGGTTTGAAAATAACAGAAA
ATATGAATAGCCTATATtactaaaatgtaaaattttgtaTACCCTTTCCA
CCCCTGTATTTAGTCAGCATTATAATACATTTCTGAAAATC Coding sequence (CDS) from alignment at sc0000197:11206..12346 >TCONS_00014744 ID=TCONS_00014744|Name=TCONS_00014744|organism=Clytia hemisphaerica|type=CDS|length=441bp|location=Sequence derived from alignment at sc0000197:11206..12346 (Clytia hemisphaerica)
ATGAACAAAGTGGTGATTTGCGTGATGACCGTGTTTGTATTAAGTCAGAT
TTTTAATGAGTTTTCATTCGTGATAACCGTAACTGGAGAACCTATACAAC
GAAAAGATGAGAAAGTAGTTCTGAACGAAAAAATTCGTATTGACTCAGAT
GAAGATGAAATTTTGATTCGTGAACGCCGCTCACCTGATCCTAGACCGTG
CGGTGGAAGATCGAGAGGCGGTGGTCGATCATCAAGaagatcatcatcat
catctcgTGGCGGAAGTTCCAGTGGTGCAGGGCGTTCGGCTGGACTTTCA
GATTGGGCGATCATAGGAATCGTGATTGCTGGTCTCGTCGCATTTCCAAT
TTGTTCTTCATTTTGctattattttaaaaagaaatgttGTGCTTCtggta
agaaaaataaaaaaactgacttCAGTATGACTTCGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014744-exon-sc0000197-1491911889:11206..12346 | TCONS_00014744-exon-sc0000197-1491911889:11206..12346 | Clytia hemisphaerica | exon |
| TCONS_00014744-exon-sc0000197-1510915933:11206..12346 | TCONS_00014744-exon-sc0000197-1510915933:11206..12346 | Clytia hemisphaerica | exon |
| TCONS_00014744-exon-sc0000197-1575043694:11206..12346 | TCONS_00014744-exon-sc0000197-1575043694:11206..12346 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:11206..12346 . |
Blast
The following BLAST results are available for this feature:
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