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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014736 ID=TCONS_00014736|Name=TCONS_00014736|organism=Clytia hemisphaerica|type=transcript|length=2127bp
tagctataaaaaataaataaaagtcaAATCTAAAATGCACAATAAACATC
ATACTatacatatttttataaaaagaagaaacaccCTTGGTCAAGGATCA
ATGTCAACTCGGAACAAACTTATGGGGTTTGTtacttttataaagaaaag
gcTATAGTTTGTTCAAGAGAAATGGAGTAACCTTTTTATCAAGATCTATT
GTTCAGgaagtttcatttttgatttgattgtATGAAAAGTTCTTTTACAA
AAGAACGTGATATTAAccacaatcaaaaatatgttattCCTTGGAATGAA
ATCGATCTTGATTCGAGTGAAGCCGCAAAAGAAATCGATATCACTGGATA
CGAACAAGTCGTTTGTTCCAATGGGAAATTGGTGTTAGTGAACACTCAAG
AAGGTTACAATCGTCCCCATGCCCTCGATGTTTTGGATCTGCAGAAGTTC
CGTTATGAACAGGATGATCCTATACAAGGTAAAAGAAAACTAGATGCTAA
TGACCCCATTCACCAGAAAACCTCTGAATACTCTTCATTCGAAGTAATGG
CAATATCACATGATTTGAATCTGGTTGCTGGTGTATTTTGGAAATTGAAC
TTAGGAAAATGTAGTAATTCTGCATTCATGGAACAGTATCACGAaatcca
tttcaatattttcaaacctCCTTCCGAGGAACCTTGGCATCAACACTCAA
TCAGTGTCAAAGGAAATTCATGTCAGCTTCGCCATTTAAAGTTTTCTCAA
AGCAACCAGCTCCTGGCTGTTATTTACACAATATGTCGACACGAAGTCTG
CAAAATATTTCGCTTGAACGAAGAGGCGACGTCAATGAGACCATACCGTA
CTTTTCAATTGGAAGTCGATTTAAACCTTCATACTGCTGTATCTCAAACT
TCGTTTAACAGATTGGAAAATTTATTTCTTGTCGAATATACTGACAATGG
ATCGCCAACAGCTGTTCTATATAATCTGGAGTCTAAGAAAGTTCACCCTC
TGCATCTTCTCAGTGCTGAACCATCATTTAAATTTATTGTGAGATCATTT
CTTGTGAGTACACTAACTCAGGACTTTGTTTTCTTCCAAGATATTTCAGA
GCTAAAAGGTTTCGAAATCAGTGCTAAAGATTCTATCTTCACACCGGTTA
TAAAAGGgatgaatattcttaaattcgtggaaccttccaaaaaagtaaaa
ataattcgaaaaatAGAGATGCATCATTATGTTTCAAAAATCAGACTATT
TTTGTTATCAGAGAATAAGCTTTATGTTATATGTCCTTTCAATGAGgtca
ttttgaaatctttcaacTACGACCCACTGaatgaaatttcactttttgta
AACTGGTCTggtgaagaaatttttgtttacgaaGGCTACAACAAACTATT
AGTGTTTGATTTTGTAGAAGATAAGGAAAAACACACAACTTTAACCAATT
TAGCAAGGAGAtccatttttgcaaatttttcggAATCGTGGTTGCGTTCA
ATGGACTTACCATCGCCTTTGGAGCGATTGTTGGGGCTAATGTGAAAAAA
AACTCAATAACATATTTttattaccgtattacttcgaataaacgcccggg
gcgtttatttaattttttcgattttaggaggggtgtttatttgaGGGGAC
GTTTACTCGAAGTAATATGGTATCCAACTTCTGTTTGTATTTTTATGATA
ATTTTGTTGGCACCTCGTTGTTTTTATGTTGAACCAGTCTAGTCAGTAAA
TTCGCTAGAATTTGttatcttttatgttttaaaatctaAACCCAGGGATT
TTTCTTAAGCACATTGAGCTTGGGTCGTTTTTGTAAACTGGTATTGGGAA
TTTCTAATTTGCCTGAAAGGGAATTTATTCAGCGAAGCTGCACATTGATG
AAGCTCGGGGTCTTGTGGGCGAAGCTCCCAAAAAGTCTTGAATATATAGA
TAATAATTAGTAATTGTCGCTcataaacaacaacaaatgtTAATTTCGct
agaaaaaatctcatttattTTGGATTGACTTTCAAAAACTCAATCTTAGA
TTAAGTATTTTGGCCGGTATACGGACGTAagaaagtgcttagaaaaatcc
ctgacaCCCCCTTTAGTTTCTGATGAG Run BLAST on NCBI transcript from alignment at sc0000197:371621..378936- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014736 ID=TCONS_00014736|Name=TCONS_00014736|organism=Clytia hemisphaerica|type=transcript|length=7316bp|location=Sequence derived from alignment at sc0000197:371621..378936- (Clytia hemisphaerica)
TAGCTATAAAAAATAAATAAAAGTCAAATCTAAAATGCACAATAAACATC
ATACTATACATATTTTTATAAAAAGAAGAAACACCCTTGGTCAAGGATCA
ATGTCAACTCGGAACAAACTTATGGGGTTTGTTACTTTTATAAAGAAAAG
GCTATAGTTTGTTCAAGAGAAATGGAGTAACCTTTTTATCAAGATCTATT
GTTCAGGAAGTTTCATTTTTGATTTGATTGGTAAGTTTTCTCTGTTATTT
AGTTCAAATGATCAAAAGTATTCGCAAAATTTGAAGAAGTATTGTTTTAA
AAACATCTTCTGAATGAACAGAGAATTTTAATCTTGTTTCAATTATTCTA
AGCCCAGTTTAGATAAAGAGTTTTGAGGATTTTACGTTATATAAAAATTG
GGCCGCTTTTTTCGGACACACCGTACATTGCGAGATTATTACCTAATGAT
CTATACCTTTCTTTCATCTCACGGTTTCAGAGAATTACCATGTTGTAGAC
AAAAAAAGGCTGAAAGAGGTTTTGTTGAATATGCTACTGTGTTTTACGAA
TTTCACACCGAAGACATTACAGTTTACGATACCATAGGTTAGGAGCATAT
AAAGCATCCCTTACTATGAGACAAAGAAAGAATAGGCGGCGCCAACGATA
GAAATGATTCAGTGCTCTTGTCTTGTCACCTCAAAATGTCCATTTGTTTG
AACAAAAATATTTATCCGAATCCAAATTGATGCTCTCAACTTCAGTCGAG
TTAGGATCTGAGAATGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTG
TATGTCCCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTGTTTGATT
TGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTT
TCTTCATTTTTTGAAAATTTTGATTTTTGGGGACTGGGGGCGAGTTTTTT
GCCAAAACGAGGCTAAAGCTTTGGGGCAGCCTGGAGACTTCAAAAATGGT
CGGATTTGGCTGAAATTTGGCACATTTGTTCCTTGAGTGAATATCTGGAG
GTGTTCTTTTTAATTTTTGAAAATTTTGATTTTTGGGGTCTGGGGACGAG
TTTTTCGCCAAAACGAGGTTAAAACTTTGGGGCAGCCTGGAGACTTAATA
AAAAATTGTTCGATTTGGCTGAAATTTTGCACATTTGTTCCTTGGGTGAA
TATCTGGGGGTGCTTTTTGCATTTTTCAATTTTGATTTTTGGGGCCTGGG
GACGAGTTTTTTGCCAAAACGAGGCTAAAGCTTTGGAGCAGCCTACATGC
CTCCAGAATGGTCGGATTTGGTTGAAATTTGGCACACTTGTTCGTTGGGT
GAATATCTGGGGGTCTACAATTGGGCCTATGAATAATTTGAAGCCACTGA
AGTTGAGCCCAGTGCGTTGCGCACATTCGACTATTTACAATTATCATCTT
TAAATCTGACTTTTGGTTTCATTATTTTTAGAGGAAAAAAGAAAGAATAA
CCAATCAAAATGGGAGATAAAATATCAATAGGAACAGAAGGTTCTTTGAG
ACCAAGGCATTATATTATACCATCGAATGAAGTAAAAGCTACTCCAAACG
AGCACCATGTCAACACTTACAACCTACCAGTCCCTGACCCTTTTCATCCA
ACAATATTTCGATGTCAGAATGGTAGGCTTATCCTTTACGATGAAAGGCT
GAAAACGTTTTACTCCACTAAATTGAATGAAAATTCTTTCAAAGCTCTTC
ATTTTGATGGTTGGAATGTTGAGAATTTTGATTTTACAGCGTNTAATGAA
AATTCTTTCAAAGCTTTTCATTTTGATGGTTGGAATGTTGAGAATTTTGA
TTTTACAGCGTTTTCTGGTGATATGAACTTAGCTATTGGTTTTTCTAAAC
CGTTGCCAAGGAAGAAATCCAGAAAATCTCCACAAAGTGGAAGTTTGATG
AATATGAATATTTTCGATTTCGAAAAACGTTCATTAACTGAAACATCCTT
ATCTTTGGGGATTGAGACCATTGATTGTTTCTTTTCTGCAACAATCTCGC
CCAATAATAAGTTGCTTTCTGTACTCTACCGAACAACAAAATCTTCTAAG
CACATCATCTGTAAGATCTTTCAATTCACAAAATCAGGTGGCTTTAAACA
ACATCGAACCTTTCGTATACAGAGCCTTGGGTATGAGAGGGTTAAGTATG
TATGTAGTTCATCATTCAATGAACATGAGAATCTGTTAATGGTGAACATT
AACCGAATACCACGTCATGTTGATACAGAGAGCATTTCTGTTTATGACAT
CGACAAAAAGAAGCTAAATTATATTTCCTACGAAAGTCAAGGGTTTCTTG
TAGAATCTTTCTTGGTAAGTACCAATCAAGGTCCTTTTGTTTTCGTGTTG
GACTTGCGCGATACCAGGATAACTGGTTACAAGCTTGATTTGGTCACTGG
TGCACATTCTAAAGTCAGCAGTATGAAACTAATCACTGGCAATTTTATCG
ATGAACCATTCGATGTTGAAATGAAAGTTTATTTTAATACAACAATACGT
ATCTTTCTATCGTCCAATGAAAAGCTTTACATTTTATGTCCATTTGAAGA
CAAAATTATCAAGAAGTTTCCTTTATTGCCAGAAGAGAAGCCTTTTCATT
GAGCATCGAAAAATAGCCATTAATTGTTCTGGTGAAGAAATATTTGTATT
TTGTCAGTTAATGCACGGTGCTTTTAAACATCGATACAAGCTCACCATGT
TTCACTATAATGAAGATGACTCACCGAAGAATTCTTTGTTGCAACTTGCA
AAGAGGTCTGTTCTTTCTAACTTTAATAAAAGTCAGTTGGAGAATTTTAA
TCTACCTCGTTCATTGAAAGAAATGCTTGGCGTCTTGTAAATGTGTTTTT
GGAGAACATTTCTTGCCGTCAAGCTTTCATATGACTTGTGATATTTAGTT
TGTATTTTGATCAAACATTTTGACGATTAAACACTTCCAATCTACGAAAA
ATAACGGAAAGTATTTTATTCCAACTATGATGATTTATTTCAACTAAATA
CTTTGACTATAAGTTAGTAGCTTATTGCATTGTATTTTTGGCAGCGAAAC
TTCTTTTTTTGGCAAATATTGACATTTCCAAGACCATTTTAAGGAAAGTT
TAGACCTTTTTGACGTAACCAGCCTTATTTCAGCTGTTTTGTAGCCCTGC
ATTGACCACTAGTCATACCAGTTAATTAACTCTTAACTCTTTTTAAAGGT
TCTCGAAAGTATACCACTCGCTTTTCTGTTTTCTTTTGACTCGTATGTCT
TTTTGTTCTCCCTGAAATCCAAAGATCTAATTTTGAATAATAATATTTTT
GACTAACTTATTGACCATATGCTTTTATAGAGTGTTAGAAATATTAATTC
CAAAATGTTGGCAACAACGTTTACACAAGAAGAGGCGAAGAACTGTTCCA
AGAAATACATTATTCCTTGGAATCAAATCAATATTCATTCTAATAAACCA
ATCAAAAGGTTTTACCCTGGTCTCAGCAGAAAATTTGGCTGCTCTCAAGG
AGAGATTGTTCTTTACATAACTGAAAAACCTTTTGGTTTTTGTGCAACTT
CGCTTGATTGTGAGTCGTTTAGTAAGTCGGGGCTGTTGCTATTATCAGGT
GAACCATCTAAACCGTTTGCTTTATCTAACGATCAATCGATAGCAGTTGG
TTTTGTCCAAGAAAGATTAACTAAATATTCCGAACAAATGATGGAACAGT
ACCCAACATATCAACGTACTTACGAAATGACCCCTAGCGATCCTCGAAAG
ACCACAATGAAAATATACCACATTGAAAAAGACGAGTTGGTTTATAAGAA
TTTGACGACACTTGGAGGTCCATACATGCTTGTGTATTATTGTGCATTCT
CTCCCAGCAATAACCTCATGGCTTTGATCTACAGTAAAGACGACCCTTTT
GTTTTCCAATGCATCATTTTCAAATTCGATCCATCTGGAAATTGTGAGCC
TTTCCGAACTTTCAAAAGTGATGCTTTCGGTAAAATGTATTATACTACAT
TCAACAGTTCAGAAGATCTCTATTTGGTGAAACTTGACAGCGATGAAAGC
ACTGGAATCCTTATTGTATACGATTTAACTCGAATGAAAACGATAACTGT
TCATTATGATGAAGATGTATTTGTTTTGCAAGCTGATTTGATCAGTACGC
CAAAACAAGATTTGATTTCACCTGTTATTCAGATTTCAACGTCAACGCTT
ACGAAATTGATCGAGAGAGTTCCACCACAAAACTAATCATTGATTGGGAT
GTTAAAACAGATCTCGACATCCAAATTGAGTGCGGAGCGTTTAAAGTTCA
TTATTTCACAAAGATTCGAGTCTATCTATCGACAGATGAAAAGTTATACG
TCCTTTGTCCGTTTCAGAAAGTTATTTTACAATCATTTGACGTAAACATG
GAAAACATTATCGATAGAGTAAGTCAAGAAATTATCCTCAATTGGTCTGG
GGAAGAAATCTTCCTCAGTACTTTAGATTCGTGTCATACTTTACTCATGG
CTCAAGCTGAAGTGTCGGTGTATTTTTTCTGTGAAGAAAAGGAGAAACAC
AATTCTCTGTTCACTTTCGCCAAACGAGCTGTCCACGCTAATTACACTAT
AAATCAACTGAAGACTTTCAATCTTCCTTTAATTTTGAGATCACTACTTG
GTCTTATGGGGTAAGGGTCTACGTTGCTGGTATTAGATGAATTTCATTTT
ATTGACACTCAATAAAGCAAAATAAAGTGGTGTAGTTTGATATTTTGGAT
ATGAAACAGAAGTCACGTTGGTTATTAAGATACTTAACCTGACTCAACAA
AAACAGAAAACAGATTTAGAATCTCGATTTTATGTCTTCTAATTTGTTTC
ATTATTTGTCATTTGTTAGTATTAAATTTCTTTACATTTATTGTACTGTA
GGAACCTTTCTTTGTATATATTATTTTCATAAAAACGAAAATTATCATCA
AGTATTATCATTGTTGTATACAAATTATTATTCTGTGCCAGAATTTTTCT
TACGTAGCGTATTACAGTAGGGTATTTAATTTTGAAATTTCCGCCACNCC
CAGCTGGCACACAACATCAAAACAACGTCTATTTGACATTCATAACGTCC
AAATAACGTTATTTGAACGTTAAAACAACGTTGTGTGCCAGCAATTATTA
TTCTGTGCCAGAATTTTTCTTACGTAGCGTATTGCAGTAGGGTATTTAAT
TTTGAAATTTCCGCCACACCAGATATCGGATATAATCACACTCGTGATTT
TTTTATTTCGAATTTTCGAATTAAAAACAATAAAATCATTCGTACAATTA
TTCTCGAATTGCACTCGTTGTCATTTGATTTCATGATACTAATACACTCT
ATTTTTCTTTACCTTTCAGTATGAAAAGTTCTTTTACAAAAGAACGTGAT
ATTAACCACAATCAAAAATATGTTATTCCTTGGAATGAAATCGATCTTGA
TTCGAGTGAAGCCGCAAAAGAAATCGATATCACTGGATACGAACAAGTCG
TTTGTTCCAATGGGAAATTGGTGTTAGTGAACACTCAAGAAGGTTACAAT
CGTCCCCATGCCCTCGATGTTTTGGATCTGCAGAAGTTCCGTTATGAACA
GGATGATCCTATACAAGGTAAAAGAAAACTAGATGCTAATGACCCCATTC
ACCAGAAAACCTCTGAATACTCTTCATTCGAAGTAATGGCAATATCACAT
GATTTGAATCTGGTTGCTGGTGTATTTTGGAAATTGAACTTAGGAAAATG
TAGTAATTCTGCATTCATGGAACAGTATCACGAAATCCATTTCAATATTT
TCAAACCTCCTTCCGAGGAACCTTGGCATCAACACTCAATCAGTGTCAAA
GGAAATTCATGTCAGCTTCGCCATTTAAAGTTTTCTCAAAGCAACCAGCT
CCTGGCTGTTATTTACACAATATGTCGACACGAAGTCTGCAAAATATTTC
GCTTGAACGAAGAGGCGACGTCAATGAGACCATACCGTACTTTTCAATTG
GAAGTCGATTTAAACCTTCATACTGCTGTATCTCAAACTTCGTTTAACAG
ATTGGAAAATTTATTTCTTGTCGAATATACTGACAATGGATCGCCAACAG
CTGTTCTATATAATCTGGAGTCTAAGAAAGTTCACCCTCTGCATCTTCTC
AGTGCTGAACCATCATTTAAATTTATTGTGAGATCATTTCTTGTGAGTAC
ACTAACTCAGGACTTTGTTTTCTTCCAAGATATTTCAGAGCTAAAAGGTT
TCGAAATCAGTGCTAAAGATTCTATCTTCACACCGGTTATAAAAGGGATG
AATATTCTTAAATTCGTGGAACCTTCCAAAAAAGTAAAAATAATTCGAAA
AATAGAGATGCATCATTATGTTTCAAAAATCAGACTATTTTTGTTATCAG
AGAATAAGCTTTATGTTATATGTCCTTTCAATGAGGTCATTTTGAAATCT
TTCAACTACGACCCACTGAATGAAATTTCACTTTTTGTAAACTGGTCTGG
TGAAGAAATTTTTGTTTACGAAGGCTACAACAAACTATTAGTGTTTGATT
TTGTAGAAGATAAGGAAAAACACACAACTTTAACCAATTTAGCAAGGAGA
TCCATTTTTGCAAATTTTTCGGAATCGTGGTTGCGTTCAATGGACTTACC
ATCGCCTTTGGAGCGATTGTTGGGGCTAATGTGAAAAAAAACTCAATAAC
ATATTTTTATTACCGTATTACTTCGAATAAACGCCCGGGGCGTTTATTTA
ATTTTTTCGATTTTAGGAGGGGTGTTTATTTGAGGGGACGTTTACTCGAA
GTAATATGGTATCCAACTTCTGTTTGTATTTTTATGATAATTTTGTTGGC
ACCTCGTTGTTTTTATGTTGAACCAGTCTAGTCAGTAAATTCGCTAGAAT
TTGTTATCTTTTATGTTTTAAAATCTAAACCCAGGGATTTTTCTTAAGCA
CATTGAGCTTGGGTCGTTTTTGTAAACTGGTATTGGGAATTTCTAATTTG
CCTGAAAGGGAATTTATTCAGCGAAGCTGCACATTGATGAAGCTCGGGGT
CTTGTGGGCGAAGCTCCCAAAAAGTCTTGAATATATAGATAATAATTAGT
AATTGTCGCTCATAAACAACAACAAATGTTAATTTCGCTAGAAAAAATCT
CATTTATTTTGGATTGACTTTCAAAAACTCAATCTTAGATTAAGTATTTT
GGCCGGTATACGGACGTAAGAAAGTGCTTAGAAAAATCCCTGACACCCCC
TTTAGTTTCTGATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014736-exon-sc0000197-1575043694:378707..378936 | TCONS_00014736-exon-sc0000197-1575043694:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014736-exon-sc0000197-1575043694:371621..373517 | TCONS_00014736-exon-sc0000197-1575043694:371621..373517 | Clytia hemisphaerica | exon |
| TCONS_00014736-exon-sc0000197-1510915933:378707..378936 | TCONS_00014736-exon-sc0000197-1510915933:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014736-exon-sc0000197-1510915933:371621..373517 | TCONS_00014736-exon-sc0000197-1510915933:371621..373517 | Clytia hemisphaerica | exon |
| TCONS_00014736-exon-sc0000197-1491911889:378707..378936 | TCONS_00014736-exon-sc0000197-1491911889:378707..378936 | Clytia hemisphaerica | exon |
| TCONS_00014736-exon-sc0000197-1491911889:371621..373517 | TCONS_00014736-exon-sc0000197-1491911889:371621..373517 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:371621..378936 - |
Blast
The following BLAST results are available for this feature:
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