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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014729 ID=TCONS_00014729|Name=TCONS_00014729|organism=Clytia hemisphaerica|type=transcript|length=1456bp
CAAAGGGAAAAGCAGATAGCATCTGGCTTGGTTGGTCTATTAATTTGCTT
CCTTcagaaaaaaaaggttttgtcaTTGAAAGTACTATTTATATTAGAGT
GATTCCACGCAGAGATAAAACTCAAAAGAAATAAGAGTTAAGACACACGT
TGACATAGCCAACATATCAAGCTGATTTTCCGtcagttaaaatcaaattc
acaaaaatattttgaagaagTGCAGATTTTTTAGGAATTTAAAGACAAGA
TGAAATACGCagtgatatttttcgtgctccAGTTTTTCTGTTTAATGGAA
TTTTCACATCAAAGATACGTCTCGATTGAAgatACAGAGGGTCCTTATCG
CAAACCTATTCCTCTGATGCTTCACATGGACCATATTGAAACGCCGTCCT
TCCCACTTCCAAATGATGTAGTGCAGAGTGGTATGCAAGATACTGAGCAG
GGTGGAATTCAGGATACGCAGGACGGTATGCAGGATACGCAGGACGGTAT
GCAGGATATGCAGGATGGTATGCAACGGGATACAAGATCTCAATGGGACT
TTCAAAGAGACATGTCTATGAACGAAATGTTAAGAAATTTGGAATTACAA
GGAGGTATGCAAGATACGAGAGCAAAGAGATTACACTTGCCAGGAAAATA
CGGGCGCCCCGCCCTGCCGCCTTCACCAAAACGAAAACACATCCGGTGGT
ATCAAACACGAAAATAAATTTTGTGAAATTTTCGATTTTCTTACAAAATG
TATTCCTTTTTTCATTCGAAATGATACCATCTTCTGTAAACTTATTTTAG
CCTGTACCAAACTGTTTTTTGTTGACTGAAAAGAAAACGCGAAGTTCAGT
TTGTTACAATTAAGCAACATTCCGTATCTCAGACATTTTTACGCAAAACT
CTGAATGTATCTGCGGTGGAGCGTAGCTATTTTTAGCATTCAATCTAGCT
CAACAAGAGTGACGCTACATTTAACGCATCAATGCAATGGTATCTTTCAT
TTTTAAAAAGAGTACTCCTACGCTTTTGTTTTGGGACAAACCAATTTCAA
ATTGAATATCGTATAATATTTTAGTGACTATGGATAAAACTGAGACACAG
AATCTGGCTAACCGAAACAGACCGACGCACGGCAAGTCTTTTCAAAATAT
AAAAAACGCCCGTGTCGGGGTGGTACAGGCTATCTCTACCTCTCCTTCTT
AATCAATTGTTTTTTTTCATGGTAGAAATTTATAAAAAAGTCATCATTTA
TTATATTTTCGAAATAGGACTCGATACATTGACTCAAAATTTAGAAAGAA
AAAGTTCCTAAAACATTATATTATTGCACTATATTTTTGTTAGCATATTT
ACATTAATTGAAAATTGTAGTATTGTATATAATTTTTAAAAGATACTAAA
TGTGTATGTTACAAAGTTGCAAATGTGAAATAAAATAATATAATATAATA
AACTAA Run BLAST on NCBI transcript from alignment at sc0000197:304029..305808- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014729 ID=TCONS_00014729|Name=TCONS_00014729|organism=Clytia hemisphaerica|type=transcript|length=1780bp|location=Sequence derived from alignment at sc0000197:304029..305808- (Clytia hemisphaerica)
CAAAGGGAAAAGCAGATAGCATCTGGCTTGGTTGGTCTATTAATTTGCTT
CCTTCAGAAAAAAAAGGTTTTGTCATTGAAAGTACTATTTATATTAGAGT
GATTCCACGCAGAGATAAAACTCAAAAGAAATAAGAGTTAAGACACACGT
TGACATAGCCAACATATCAAGCTGATTTTCCGTCAGTTAAAATCAAATTC
ACAAAAATATTTTGAAGAAGTGCAGATTTTTTAGGAATTTAAAGACAAGA
TGAAATACGCAGTGATATTTTTCGTGCTCCAGTTTTTCTGTTTAATGGAA
TTTTCACATCAAAGATACGTCTCGATTGAAGGTAAGATTTTTTGAAATTT
TTTCCTAGAAGTTCAAAATTTTTAAAAAATCAAAAAGGTTTTTGCGTTAA
GGGATTTTAGTCAAGGGATTTTAGTCAAGTTCGTTTATCTTAAAGTGAGA
CCACGCATTACAATCATGATTAATCTATTTGTTAGAATTGATGTTATCCC
AAAAAGGAGCCAAACGGGTGCTTGCATTTAGTCTCCAAACGCCAAGGAGT
GAATATTTTTTGAAAACAAAGTATTGCGTGAGATTTTCTTGTACTGAGCA
ATTTATTTTTTCTTTCCAGATACAGAGGGTCCTTATCGCAAACCTATTCC
TCTGATGCTTCACATGGACCATATTGAAACGCCGTCCTTCCCACTTCCAA
ATGATGTAGTGCAGAGTGGTATGCAAGATACTGAGCAGGGTGGTATGCAG
GTCCCTCAAGACGGTACCGTGCAAGGTGGAATTCAGGATACGCAGGACGG
TATGCAGGATACGCAGGACGGTATGCAGGATATGCAGGATGGTATGCAAC
GGGATACAAGATCTCAATGGGACTTTCAAAGAGACATGTCTATGAACGAA
ATGTTAAGAAATTTGGAATTACAAGGAGGTATGCAAGATACGAGAGCAAA
GAGATTACACTTGCCAGGAAAATACGGGCGCCCCGCCCTGCCGCCTTCAC
CAAAACGAAAACACATCCGGTGGTATCAAACACGAAAATAAATTTTGTGA
AATTTTCGATTTTCTTACAAAATGTATTCCTTTTTTCATTCGAAATGATA
CCATCTTCTGTAAACTTATTTTAGCCTGTACCAAACTGTTTTTTGTTGAC
TGAAAAGAAAACGCGAAGTTCAGTTTGTTACAATTAAGCAACATTCCGTA
TCTCAGACATTTTTACGCAAAACTCTGAATGTATCTGCGGTGGAGCGTAG
CTATTTTTAGCATTCAATCTAGCTCAACAAGAGTGACGCTACATTTAACG
CATCAATGCAATGGTATCTTTCATTTTTAAAAAGAGTACTCCTACGCTTT
TGTTTTGGGACAAACCAATTTCAAATTGAATATCGTATAATATTTTAGTG
ACTATGGATAAAACTGAGACACAGAATCTGGCTAACCGAAACAGACCGAC
GCACGGCAAGTCTTTTCAAAATATAAAAAACGCCCGTGTCGGGGTGGTAC
AGGCTATCTCTACCTCTCCTTCTTAATCAATTGTTTTTTTTCATGGTAGA
AATTTATAAAAAAGTCATCATTTATTATATTTTCGAAATAGGACTCGATA
CATTGACTCAAAATTTAGAAAGAAAAAGTTCCTAAAACATTATATTATTG
CACTATATTTTTGTTAGCATATTTACATTAATTGAAAATTGTAGTATTGT
ATATAATTTTTAAAAGATACTAAATGTGTATGTTACAAAGTTGCAAATGT
GAAATAAAATAATATAATATAATAAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014729-exon-sc0000197-1575043694:305478..305808 | TCONS_00014729-exon-sc0000197-1575043694:305478..305808 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1575043694:305070..305189 | TCONS_00014729-exon-sc0000197-1575043694:305070..305189 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1575043694:304029..305033 | TCONS_00014729-exon-sc0000197-1575043694:304029..305033 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1510915933:305478..305808 | TCONS_00014729-exon-sc0000197-1510915933:305478..305808 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1510915933:305070..305189 | TCONS_00014729-exon-sc0000197-1510915933:305070..305189 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1510915933:304029..305033 | TCONS_00014729-exon-sc0000197-1510915933:304029..305033 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1491911889:305478..305808 | TCONS_00014729-exon-sc0000197-1491911889:305478..305808 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1491911889:305070..305189 | TCONS_00014729-exon-sc0000197-1491911889:305070..305189 | Clytia hemisphaerica | exon |
| TCONS_00014729-exon-sc0000197-1491911889:304029..305033 | TCONS_00014729-exon-sc0000197-1491911889:304029..305033 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:304029..305808 - |
Blast
The following BLAST results are available for this feature:
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