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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014634 ID=TCONS_00014634|Name=TCONS_00014634|organism=Clytia hemisphaerica|type=transcript|length=4138bp
ggacgaacgaacggacgaacaaaggttaatttatagataTACCATCGAAT
AGAGTCTAAAATTTTGAACGAGAAAATGTACAGCAACTTGCTTCTTACTT
CAAAATACTAACGCAATTACGGCGTTTCAAAGCTTTTAAAATTACGGTAA
AATGCGAAACTTGGAATTTACGTCAAAATCAGTACTTAACgtcaaaaaag
tctaaaaactGCAAATGCAGGTCTCAATTTATCGACTCCACGAAAATCGA
AATCTAATGGGCACCTTGActttgatatattttgaaagCTGATGCATCAG
CGCACTTTTCTATACCCCTTTTATCGACTTATCTGCAACCTAGCGGTCAG
CaataaagaaattgtaaaaaaatcgaagaaaaaccACTTCTCAAAACTTC
TTAAATCCTCAAAATTATCGGTTTATCGTCGTTATATTTTGCTGAATTCG
GTTTTTTATTCAAGGATACGATGTAAAGTATCAGTCCGACTAATCAAAAG
TCTTCTAAAGCGTGTTTGTGACTTGTTACTGATTTACTTGATTTACGTCA
GACCTGCATTCTGTGACGCACCTACATTCTGTGGGCCAGGGACTGTATGT
ATAATAAATGTTGACGATtgattttaactgtttttaatgtttttatatcT
ATTTACTTTAATTCTAGACCTGAAGATGGATAATAATCCGAAATAgattg
tcaaaaaataaaataagaaattgttGGTACAAATCTcatgacaaaaaata
ataatttaagaaattgtgaattatgacgtcataatctgATGACAGCAata
aatcagaaaattcaacataaacaaaaacttgagcaaacggctttaaagct
tcaaaagatctagaaaaagaatccccttgatgaaaatcatgtgtttgatt
tgccgagttaaaaaaataaatgacagaaattgaagcttgcaacagattta
cactagAAAtgctttggtacaacactgacttttatcacatctgactatcg
cttgagccgccatcttgaaacaccacattatgcattatgatctgtaaaaa
caacgcacgctaaaagtacccaaaaagttaacccgatcggaagaaagttt
agaaatcaaagtgagatcgggaaatcggattttttttgccgtcttatgat
gatggtgatgatggtgatggaagaaaattttacctatttgaatgctcagc
ttaggctgaccaataaaagggaaaatgaatgaaaaaggaTTTTATATTTA
GTTGATTTAGTTTAGATTTTCTGATCAATCTAAAAATCGATGTTtctata
ttgaaaaaaaacctCAGTCACCTTTAACGCACCCACTCGCTGACAACAAT
TGACGTTTTTTTAACAGCTAAATCGAATTTGTGACCGACCCTTAACATAT
GCCATAGCAGATATAAACAATTATCGCTCCAGCTTAAAAAAATTCTAGAG
CCTATGCTAATGAACATATCTAATAAGGCCCCCACTTTGTTGCACCCAAC
TTTTTTGGACGCATGCCATATAAGTTACACGATGAGATCATCCTTCGATC
CATCGCTCCATTGGTCCAATGATTCGTCGATCTGTTGATCTGTTGATTTG
ATCCATTGATCCATCGATCCGTTGATCCTTTGATCAATCGATCCCGCAGA
TCTATAAAGGCCGAAGGGCTGGatatgcaactttaagctttctccagcaa
agacttttaaatttcgtgcGTGCCGGTGGATAGGATCTagtattttaatt
gttttcggagcacGACATCAAAAAAGTGGTCGGCAAACGCTATTTGGCAT
Ccttcaaaccggtgaaattgcatattttagtcacgtgactttggtagaaa
atccttccaaacctagcctcacttttcaataaaagtagTCATTTATCTAG
CCCCCTTCAGGAGCTTTTCCGATCTGTGGTCGATCCGTCGATCCATTGAT
CCATTGATCCATCGATCCGTCGATCCATTGATCCATCGGTCCAACGATCC
ATTGATCCGTCGATCCTTGATCCGTTGATCCATTGGTCCATCGATCCATT
GATCCGTTGATCCATCGATCCGTCGATCCGTCGATCCATTGATCCGTTGA
TCCATCGATCCATTGATCCGTTGATCCATTGATCCGTCGATCCATCGATC
CGTTGATCCATTGATCCGTTGATCCATTGATCCGTCGATCCATTGATCCG
TTGATCCATCGATCCGTCGATCCATTTGATCCGTTGATCCATCGATCCAT
TGATCCGTTGATCCATTGATCCGTCGATCCATCGATCCATCGATCCATTG
ATCCGTTGATCCATTGAACCGTCGATCCGTCGATCCGTCGATCCTTGATC
CGTCGATCCGTTGATCCGTCGATCCTTGATCCGTCGATCCATTGATCCGT
CGATCCATCGATCCGTTGAGCCACTGATCCGTCGATCTATCGAACGATCC
ATTGATCCGTCGATCCAGCGAAGTTTAATGTTATGTTAAAACGGATAGAA
ACAGATACAAGGGTAACTGAATGCAGCTTGATGACGTCAGTTGTGCTTCT
TATACGGGTGATTAgccaagtttgcaatatattttatcaacattttcaac
tctaaaatgcagaatttcaactgcgtgtatatttttgaatcccttttgtc
actcaaataatttttttttNATGATGGATTTCGCAACCTTTTTGAACGGA
ACCTGGGTGTTTGGTGAAGTGCTCTGCAAAATCCAGAGCTACATTTTAGA
AATAAACTTCACAGCGTCCACTCTGACCTTGGTTGCAGTTTCATTCGAAA
GGTATTTACTGATTTGCCACCCGTACATGAAGAGAAGGTCCATCAAATCC
ATCTATAAAATCATTGGTGCTGTTTGGCTCATCGCGTTCTTGATTTGCTC
GCCCCTCTTACACGGTTACGCGGTTACAGAAGAGATGAACAGAGAAAGTG
GTGACCTGTATCTCCGTTGTCACAATACGTGGGGTTTAAAAGGTGAATTG
GCTTTCTACAGTACCTACTCTGCAATCACCTACCTTTTCCCCTTCGTCCT
CATGGCGTTCGCACATTGGAGAATCTCGCTCTCCATCAAAGAGAACAACG
ACCGCCGCGCGTCCGCCTCAGCTCAAAGCACCTTGATCAAAGAGAAGAAA
TCGAGTGTGTGCTACACCATTCGCGAGGAGTCAAGCAGTTCCACCAGCAC
TGAACGTACTGCTGTGGAGGAGGTGGAACCAACGCCTGCACCACCACCAC
AACAAGACTCGCCGCCCTCCTCCAAAGGATTACCAAAATCCTTTCTCCGA
TCAATCAGTGGACTGTCCACGCGCACACGCTCCTCCATCGCTGCCGACCG
TGAGATATACCGGCGTGAGAAACGTGTCAAAGCTATCCGTCTCTTGTTTG
TTGTCACTATCACGTTCTTCATGCTGTGGACGCCGTTCATCATCCTACGT
TTGTTACGCGACGCTGGTGTTCACGTCAATAAATATCTGTACACGTTCTC
CGAGATAATAATTTTTAGCTCGACCGCCGTCAATGGCTTCATTTACGCGT
TCATCAGTAGGCCGTTCAGAAAcgcgtttaaagctattttgtgTTGTCGC
ACACACCGTGACGCGGTTTCTAGAGACTCTGGACCAAGTATGAGTAACTC
TGAAGACAACAGACTTGCCAACCGTGGAAACTACTCCAGCAGAGGTTCAG
TCACTTACTCATCGGACAATAAAAATGGGAATGCCCCAAAAATTTATTCT
CAATTGAACGCAAATGGACATCACCATATGGTGAATGACGTTTGATTACG
tcattatcttttgaaaaacttttactacGTTGCTTGCTGTACATATTCTT
TTATTCGtaaaacaaaaaagttcaaaacCTTTTAGTCAGAAGAAATTTCG
TGACCTCCGTTGAGTGTTTTAATGGTGGTATGAATTTTACTGTCTTAATT
TGTATATATGGTTAATTTGTTGTTTATCTGTACTTTTAGAGAGCTTTTAT
TGGGCTTTTTATTGTATATATAATGTtggtttatttgaaaaattttattt
caaagttattTCTGAAACCACCCAGTCTTTATTTCAGGATGCACCTTAAA
CCCTATTAGTATCAATTTCCCCAACATATTTTGCTTGT Run BLAST on NCBI transcript from alignment at sc0000191:375064..379201- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014634 ID=TCONS_00014634|Name=TCONS_00014634|organism=Clytia hemisphaerica|type=transcript|length=4138bp|location=Sequence derived from alignment at sc0000191:375064..379201- (Clytia hemisphaerica)
GGACGAACGAACGGACGAACAAAGGTTAATTTATAGATATACCATCGAAT
AGAGTCTAAAATTTTGAACGAGAAAATGTACAGCAACTTGCTTCTTACTT
CAAAATACTAACGCAATTACGGCGTTTCAAAGCTTTTAAAATTACGGTAA
AATGCGAAACTTGGAATTTACGTCAAAATCAGTACTTAACGTCAAAAAAG
TCTAAAAACTGCAAATGCAGGTCTCAATTTATCGACTCCACGAAAATCGA
AATCTAATGGGCACCTTGACTTTGATATATTTTGAAAGCTGATGCATCAG
CGCACTTTTCTATACCCCTTTTATCGACTTATCTGCAACCTAGCGGTCAG
CAATAAAGAAATTGTAAAAAAATCGAAGAAAAACCACTTCTCAAAACTTC
TTAAATCCTCAAAATTATCGGTTTATCGTCGTTATATTTTGCTGAATTCG
GTTTTTTATTCAAGGATACGATGTAAAGTATCAGTCCGACTAATCAAAAG
TCTTCTAAAGCGTGTTTGTGACTTGTTACTGATTTACTTGATTTACGTCA
GACCTGCATTCTGTGACGCACCTACATTCTGTGGGCCAGGGACTGTATGT
ATAATAAATGTTGACGATTGATTTTAACTGTTTTTAATGTTTTTATATCT
ATTTACTTTAATTCTAGACCTGAAGATGGATAATAATCCGAAATAGATTG
TCAAAAAATAAAATAAGAAATTGTTGGTACAAATCTCATGACAAAAAATA
ATAATTTAAGAAATTGTGAATTATGACGTCATAATCTGATGACAGCAATA
AATCAGAAAATTCAACATAAACAAAAACTTGAGCAAACGGCTTTAAAGCT
TCAAAAGATCTAGAAAAAGAATCCCCTTGATGAAAATCATGTGTTTGATT
TGCCGAGTTAAAAAAATAAATGACAGAAATTGAAGCTTGCAACAGATTTA
CACTAGAAATGCTTTGGTACAACACTGACTTTTATCACATCTGACTATCG
CTTGAGCCGCCATCTTGAAACACCACATTATGCATTATGATCTGTAAAAA
CAACGCACGCTAAAAGTACCCAAAAAGTTAACCCGATCGGAAGAAAGTTT
AGAAATCAAAGTGAGATCGGGAAATCGGATTTTTTTTGCCGTCTTATGAT
GATGGTGATGATGGTGATGGAAGAAAATTTTACCTATTTGAATGCTCAGC
TTAGGCTGACCAATAAAAGGGAAAATGAATGAAAAAGGATTTTATATTTA
GTTGATTTAGTTTAGATTTTCTGATCAATCTAAAAATCGATGTTTCTATA
TTGAAAAAAAACCTCAGTCACCTTTAACGCACCCACTCGCTGACAACAAT
TGACGTTTTTTTAACAGCTAAATCGAATTTGTGACCGACCCTTAACATAT
GCCATAGCAGATATAAACAATTATCGCTCCAGCTTAAAAAAATTCTAGAG
CCTATGCTAATGAACATATCTAATAAGGCCCCCACTTTGTTGCACCCAAC
TTTTTTGGACGCATGCCATATAAGTTACACGATGAGATCATCCTTCGATC
CATCGCTCCATTGGTCCAATGATTCGTCGATCTGTTGATCTGTTGATTTG
ATCCATTGATCCATCGATCCGTTGATCCTTTGATCAATCGATCCCGCAGA
TCTATAAAGGCCGAAGGGCTGGATATGCAACTTTAAGCTTTCTCCAGCAA
AGACTTTTAAATTTCGTGCGTGCCGGTGGATAGGATCTAGTATTTTAATT
GTTTTCGGAGCACGACATCAAAAAAGTGGTCGGCAAACGCTATTTGGCAT
CCTTCAAACCGGTGAAATTGCATATTTTAGTCACGTGACTTTGGTAGAAA
ATCCTTCCAAACCTAGCCTCACTTTTCAATAAAAGTAGTCATTTATCTAG
CCCCCTTCAGGAGCTTTTCCGATCTGTGGTCGATCCGTCGATCCATTGAT
CCATTGATCCATCGATCCGTCGATCCATTGATCCATCGGTCCAACGATCC
ATTGATCCGTCGATCCTTGATCCGTTGATCCATTGGTCCATCGATCCATT
GATCCGTTGATCCATCGATCCGTCGATCCGTCGATCCATTGATCCGTTGA
TCCATCGATCCATTGATCCGTTGATCCATTGATCCGTCGATCCATCGATC
CGTTGATCCATTGATCCGTTGATCCATTGATCCGTCGATCCATTGATCCG
TTGATCCATCGATCCGTCGATCCATTTGATCCGTTGATCCATCGATCCAT
TGATCCGTTGATCCATTGATCCGTCGATCCATCGATCCATCGATCCATTG
ATCCGTTGATCCATTGAACCGTCGATCCGTCGATCCGTCGATCCTTGATC
CGTCGATCCGTTGATCCGTCGATCCTTGATCCGTCGATCCATTGATCCGT
CGATCCATCGATCCGTTGAGCCACTGATCCGTCGATCTATCGAACGATCC
ATTGATCCGTCGATCCAGCGAAGTTTAATGTTATGTTAAAACGGATAGAA
ACAGATACAAGGGTAACTGAATGCAGCTTGATGACGTCAGTTGTGCTTCT
TATACGGGTGATTAGCCAAGTTTGCAATATATTTTATCAACATTTTCAAC
TCTAAAATGCAGAATTTCAACTGCGTGTATATTTTTGAATCCCTTTTGTC
ACTCAAATAATTTTTTTTTNATGATGGATTTCGCAACCTTTTTGAACGGA
ACCTGGGTGTTTGGTGAAGTGCTCTGCAAAATCCAGAGCTACATTTTAGA
AATAAACTTCACAGCGTCCACTCTGACCTTGGTTGCAGTTTCATTCGAAA
GGTATTTACTGATTTGCCACCCGTACATGAAGAGAAGGTCCATCAAATCC
ATCTATAAAATCATTGGTGCTGTTTGGCTCATCGCGTTCTTGATTTGCTC
GCCCCTCTTACACGGTTACGCGGTTACAGAAGAGATGAACAGAGAAAGTG
GTGACCTGTATCTCCGTTGTCACAATACGTGGGGTTTAAAAGGTGAATTG
GCTTTCTACAGTACCTACTCTGCAATCACCTACCTTTTCCCCTTCGTCCT
CATGGCGTTCGCACATTGGAGAATCTCGCTCTCCATCAAAGAGAACAACG
ACCGCCGCGCGTCCGCCTCAGCTCAAAGCACCTTGATCAAAGAGAAGAAA
TCGAGTGTGTGCTACACCATTCGCGAGGAGTCAAGCAGTTCCACCAGCAC
TGAACGTACTGCTGTGGAGGAGGTGGAACCAACGCCTGCACCACCACCAC
AACAAGACTCGCCGCCCTCCTCCAAAGGATTACCAAAATCCTTTCTCCGA
TCAATCAGTGGACTGTCCACGCGCACACGCTCCTCCATCGCTGCCGACCG
TGAGATATACCGGCGTGAGAAACGTGTCAAAGCTATCCGTCTCTTGTTTG
TTGTCACTATCACGTTCTTCATGCTGTGGACGCCGTTCATCATCCTACGT
TTGTTACGCGACGCTGGTGTTCACGTCAATAAATATCTGTACACGTTCTC
CGAGATAATAATTTTTAGCTCGACCGCCGTCAATGGCTTCATTTACGCGT
TCATCAGTAGGCCGTTCAGAAACGCGTTTAAAGCTATTTTGTGTTGTCGC
ACACACCGTGACGCGGTTTCTAGAGACTCTGGACCAAGTATGAGTAACTC
TGAAGACAACAGACTTGCCAACCGTGGAAACTACTCCAGCAGAGGTTCAG
TCACTTACTCATCGGACAATAAAAATGGGAATGCCCCAAAAATTTATTCT
CAATTGAACGCAAATGGACATCACCATATGGTGAATGACGTTTGATTACG
TCATTATCTTTTGAAAAACTTTTACTACGTTGCTTGCTGTACATATTCTT
TTATTCGTAAAACAAAAAAGTTCAAAACCTTTTAGTCAGAAGAAATTTCG
TGACCTCCGTTGAGTGTTTTAATGGTGGTATGAATTTTACTGTCTTAATT
TGTATATATGGTTAATTTGTTGTTTATCTGTACTTTTAGAGAGCTTTTAT
TGGGCTTTTTATTGTATATATAATGTTGGTTTATTTGAAAAATTTTATTT
CAAAGTTATTTCTGAAACCACCCAGTCTTTATTTCAGGATGCACCTTAAA
CCCTATTAGTATCAATTTCCCCAACATATTTTGCTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014634-exon-sc0000191-1575043694:375064..379201 | TCONS_00014634-exon-sc0000191-1575043694:375064..379201 | Clytia hemisphaerica | exon |
| TCONS_00014634-exon-sc0000191-1510915933:375064..379201 | TCONS_00014634-exon-sc0000191-1510915933:375064..379201 | Clytia hemisphaerica | exon |
| TCONS_00014634-exon-sc0000191-1491911889:375064..379201 | TCONS_00014634-exon-sc0000191-1491911889:375064..379201 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191 | supercontig | sc0000191:375064..379201 - |
Blast
The following BLAST results are available for this feature:
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