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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014503 ID=TCONS_00014503|Name=TCONS_00014503|organism=Clytia hemisphaerica|type=transcript|length=1797bp
ATTTGTTTGAAAAGCGGAAGTGAACCACAACAAAGGGAAGAACAttcact
ttcttcttcttcacctTATTATAACAAAGAATATTTAATGAAAGACCATT
CAAACACTTTTCCCGAAATCAAAAGATACTATAATAAACATGATTTAGGA
TTGAGTTAATTGAAGAGAGAAAACATTTAGGGATGTAAAGTGAATGAAAG
GTTGAAGCCAACTCAATAAgcattcatcaaaatcaatcagTGGGTTATGA
AATAAGAACCGTTAAACACAGAGTAATACAAAcgtgaaatatttttagat
gatttcttcttctttatttctCAACTCCATCATTTCACAGAAGCAGAAGT
GAAAGATGGAAGAACTCATCGCACTCAACCGATCAGCCAATCACACCTTC
AACAGTACCTACCCCACCATGCTATCCTTCTTCTCTAGAGAAACCACCAC
CTTTTATTATTGCGCTTTTTCGCTGATGTTTGTCATCGGTAGCGTTGGCA
ACAGTGCAGTCATTTACATCATCACTTTGAAGCATCAAAACAAGAAATCC
AATTTCGATATTTACATCATTTCGCTTGCCATCACTGACTTATTAGCGTC
GATATTTCTTCCTGTGGTCATGATACATGATTTGTATACAGAGTGGAACC
ATTGGCACTTGGGAAGTTTTGGGTGTAAGATATTGGTTCCCATGCCACAC
ATCAATTCTTTGGTCTCAGCTCTCATGTTGGTCGTCATTTCTTTCGACAG
ATTAAGGGTGATTCGGCAAACCAGTTTGAAGCGTCGTTCACGCAGAATCA
CTATCGCAGAAGTTGTTGTAGTCTGGATCATTTCCATCCTGATCGTCTCT
CCGTACATTTACTTCCTGGAGGTACAAAACGGGTTCTGTAAAGACCATTG
GGAGAGGATCTACCGTTTCGTTTATTACACTGTTCTGCAGTTCTTCTCCT
GCTTCTTCCCCATCATCATCATGATCGCTACCTACGCCACCAGTGCTCAC
ATCCTTCTCCACAACAAATTTCCCGGTGATTCAGTCTACATGATGAAACG
GAGACGTCGCAAGCAAAACCAACGGGTGACGCAAATGTTCGGCATCATTG
TCATCATCTTTTTCGTCATGACGACGCCGTATATGATTTCCTTCTTTATC
GTCGCTTATTACGGAACGTTCGATATCCAAACTTACCGCGTCAAAGGGAA
ATTATTGTTTGATTTACAATATGCATTTTATACACTGATGGGTTTCAATG
CTTGCATCAACCCCTTTATTTATGCTATGCGTTATAAGGATATTAGCAGA
ACTTTCAAGAGGTTTCTTTCAACGCAAAGAAGTGCAGACAAAATGAAACG
AAAGTATGGAGTGGTCAAAATGGTGGATAGGAAATATGGATTCGTTGGTA
TCAGTGCCAAGTTGATACAACaggaagattttttcaaaggaGAAGCGCTT
GATAGTGGATAGACCTATAGATACCTTGAATAATTTAATTTAGTAAAAGA
ACTAACTATAATTTTAGAAATCCCATAGTTCGTTTGTAGGAATTTGTAAG
CAAACTGTCAAACAAAAATTCGAACCTGATCCGTGATATTCTGTCTTATA
TGCGACTCTTTTTCGATCTTCAACTGCAACACGGCCATCTTTAGAAGTTT
CTCTTCACTCAGTAGTTTCTTTTGCAAAGTTTCGATTTCTTGGAGAAGTA
AAGGTGTGATGTTTTCAAGACCACGTTTTCGAGCGAAAGCAGCGGCTGCT
GAAGTGTGAATGTAATGCATCCAATTCTCTGTCTCTGTTTGACTTGT Run BLAST on NCBI transcript from alignment at sc0000188:120391..122557- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014503 ID=TCONS_00014503|Name=TCONS_00014503|organism=Clytia hemisphaerica|type=transcript|length=2167bp|location=Sequence derived from alignment at sc0000188:120391..122557- (Clytia hemisphaerica)
ATTTGTTTGAAAAGCGGAAGTGAACCACAACAAAGGGAAGAACATTCACT
TTCTTCTTCTTCACCTTATTATAACAAAGAATATTTAATGAAAGACCATT
CAAACACTTTTCCCGAAATCAAAAGATACTATAATAAACATGATTTAGGA
TTGAGTTAATTGAAGAGAGAAAACATTTAGGGATGTAAAGTGAATGAAAG
GTTGAAGCCAACTCAATAAGCATTCATCAAAATCAATCAGTGGGTTATGA
AATAAGAACCGTTAAACACAGAGTAATACAAACGTGAAATATTTTTAGAT
GATTTCTTCTTCTTTATTTCTCAACTCCATCATTTCACAGAAGCAGAAGT
GAAAGATGGAAGAACTCATCGCACTCAACCGATCAGCCAATCACACCTTC
AACAGTACCTACCCCACCATGCTATCCTTCTTCTCTAGAGAAACCACCAC
CTTTTATTATTGCGCTTTTTCGCTGATGTTTGTCATCGGTAGCGTTGGCA
ACAGTGCAGTCATTTACATCATCACTTTGAAGCATCAAAACAAGAAATCC
AATTTCGATATTTACATCATTTCGCTTGCCATCACTGACTTATTAGCGTC
GATATTTCTTCCTGTGGTCATGATACATGATTTGTATACAGAGTGGAACC
ATTGGCACTTGGGAAGTTTTGGGTGTAAGATATTGGTTCCCATGCCACAC
ATCAATTCTTTGGTCTCAGCTCTCATGTTGGTCGTCATTTCTTTCGACAG
ATTAAGGTATGTCAATGTTCATTGAGTTGGGTTTTTAACAGTTTTCACCA
ACTAATTACGATAAGTAAGGGTAACACGATTGGTAAGACCCCGGGAGCGA
TTTAAGTATCGGTGATCATTTTTAGTGCCTTAGCTCCGTATGCCAAAGAT
CAGTCAGTGACGTAAAACGATGGAGTATACCTTCAGCTTGAAATTTTTAA
GTTTGAAAATACCCTCACTTTCTGTCGCTTTTTATCGCTTCTTATCGGCC
AGAAGAAGCCAATCTGTTTGTTTACTTTTAAGATAATAACAGAACTTCGT
TTCCGGGTACATCGAGAAACTTCACCCCATACAGTAAAAGAGGTTTCACT
AATGATCGATTCTCTTTCGTGTTCAGGGTGATTCGGCAAACCAGTTTGAA
GCGTCGTTCACGCAGAATCACTATCGCAGAAGTTGTTGTAGTCTGGATCA
TTTCCATCCTGATCGTCTCTCCGTACATTTACTTCCTGGAGGTACAAAAC
GGGTTCTGTAAAGACCATTGGGAGAGGATCTACCGTTTCGTTTATTACAC
TGTTCTGCAGTTCTTCTCCTGCTTCTTCCCCATCATCATCATGATCGCTA
CCTACGCCACCAGTGCTCACATCCTTCTCCACAACAAATTTCCCGGTGAT
TCAGTCTACATGATGAAACGGAGACGTCGCAAGCAAAACCAACGGGTGAC
GCAAATGTTCGGCATCATTGTCATCATCTTTTTCGTCATGACGACGCCGT
ATATGATTTCCTTCTTTATCGTCGCTTATTACGGAACGTTCGATATCCAA
ACTTACCGCGTCAAAGGGAAATTATTGTTTGATTTACAATATGCATTTTA
TACACTGATGGGTTTCAATGCTTGCATCAACCCCTTTATTTATGCTATGC
GTTATAAGGATATTAGCAGAACTTTCAAGAGGTTTCTTTCAACGCAAAGA
AGTGCAGACAAAATGAAACGAAAGTATGGAGTGGTCAAAATGGTGGATAG
GAAATATGGATTCGTTGGTATCAGTGCCAAGTTGATACAACAGGAAGATT
TTTTCAAAGGAGAAGCGCTTGATAGTGGATAGACCTATAGATACCTTGAA
TAATTTAATTTAGTAAAAGAACTAACTATAATTTTAGAAATCCCATAGTT
CGTTTGTAGGAATTTGTAAGCAAACTGTCAAACAAAAATTCGAACCTGAT
CCGTGATATTCTGTCTTATATGCGACTCTTTTTCGATCTTCAACTGCAAC
ACGGCCATCTTTAGAAGTTTCTCTTCACTCAGTAGTTTCTTTTGCAAAGT
TTCGATTTCTTGGAGAAGTAAAGGTGTGATGTTTTCAAGACCACGTTTTC
GAGCGAAAGCAGCGGCTGCTGAAGTGTGAATGTAATGCATCCAATTCTCT
GTCTCTGTTTGACTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014503-exon-sc0000188-1575043694:121802..122557 | TCONS_00014503-exon-sc0000188-1575043694:121802..122557 | Clytia hemisphaerica | exon |
| TCONS_00014503-exon-sc0000188-1575043694:120391..121431 | TCONS_00014503-exon-sc0000188-1575043694:120391..121431 | Clytia hemisphaerica | exon |
| TCONS_00014503-exon-sc0000188-1510915933:121802..122557 | TCONS_00014503-exon-sc0000188-1510915933:121802..122557 | Clytia hemisphaerica | exon |
| TCONS_00014503-exon-sc0000188-1510915933:120391..121431 | TCONS_00014503-exon-sc0000188-1510915933:120391..121431 | Clytia hemisphaerica | exon |
| TCONS_00014503-exon-sc0000188-1491911889:121802..122557 | TCONS_00014503-exon-sc0000188-1491911889:121802..122557 | Clytia hemisphaerica | exon |
| TCONS_00014503-exon-sc0000188-1491911889:120391..121431 | TCONS_00014503-exon-sc0000188-1491911889:120391..121431 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000188 | supercontig | sc0000188:120391..122557 - |
Blast
The following BLAST results are available for this feature:
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