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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014459 ID=TCONS_00014459|Name=TCONS_00014459|organism=Clytia hemisphaerica|type=transcript|length=1334bp
AGCATATTTTATTCTCTACAATTTTATAAGTCTAAAAGCAAAAACTAAGG
Ccaaaaaataatgtttaaaattttaattagtctacttttcacaaaataaa
aaaaacgagaGGAAATACAAAAAACGCACTAAAACAATTTAATATGATAT
cagtcaaaaataatcatttacctaataatttaaaatcataatttcttcat
aatattttaaatattttaaacaatctCCGATTACAATATTTTAGTCAAAA
GCAAAGATTATACAGTAAGTAAAATTTATAAGACCAAAATCCGCTTTTGA
ACAGATAGGAAAtgaaattacacgttttttttgttaatataagaacaaac
tttataagaacataaggcttcgatagccaaaatattaagaacaagttaag
aacattttgaggctttatGGACaataaaacacccgatttcataggaaaat
ttaaaaaatacccacaaaatggtgaaaataaaaacattttaaggtttaaa
ACTCAGAAGTTAAGAAGAACCGAAGGCTCCTtctgtccttataaaaaaac
gtgtaattggGCTTAACTACACCAgcaaaattgttattttttattgattc
tACTGAGAGAACTTATGTTAGCAAAAGTTTTATGATGGACTAGGTAACGT
ACTAGGAAAATGATGGTTCTTTCATTTCAATACaaaatagattttctttt
agATGTCAATAGTTTTCAAGGCTGACAATTTAGTAATAAAAAATTTCGGC
TATTCATGATAAACTAATAAACATAGTGTAGCTAAGTAAGTGCATGCTGC
AAAAACTTAAGTCAATCACTTAATTACAAACTGTAAATTTCTTTTGTCAG
ACAATGCATTAGCATAAGTATTTtaaaaaactgtcatttttAATAAGATT
ACTGTGAATTTGCACGAGTGGGTGTCAACATGGATGCaattttctaataa
aaatatCAAGTTAGAACTCATTCCAGCTGACATTAAGAAATAATGTattg
caaaaataaaaagaaaatgtctcttttttaaatatttgtgGGGGAGGCTT
TATGTCAGCAACAAAAAGTTCAAAGTAGAAAGACATTGTCAGCAAACTGA
ATAAAATGATgtttaaatcaaatattttaaaacgATGTTTGCATtgtcaa
acaaaaactttcaatGTTGACTTTTTGTCAAGTCTAATGAtaataaaagc
aaaaaagatacatttttatatataaacacagcatagaaaaaaatattttc
ctcttAACATAAGGGGGAGGAGATCTTACATGAAAGGATATCTCGTGATA
TAAACATTTCAAGATAATATTGAAACTATGTTGC Run BLAST on NCBI transcript from alignment at sc0000187:252130..253463 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014459 ID=TCONS_00014459|Name=TCONS_00014459|organism=Clytia hemisphaerica|type=transcript|length=1334bp|location=Sequence derived from alignment at sc0000187:252130..253463 (Clytia hemisphaerica)
GCAACATAGTTTCAATATTATCTTGAAATGTTTATATCACGAGATATCCT
TTCATGTAAGATCTCCTCCCCCTTATGTTaagaggaaaatatttttttct
atgctgtgtttatatataaaaatgtatcttttttgcttttattaTCATTA
GACTTGACAAAAAGTCAACattgaaagtttttgtttgacaATGCAAACAT
cgttttaaaatatttgatttaaacATCATTTTATTCAGTTTGCTGACAAT
GTCTTTCTACTTTGAACTTTTTGTTGCTGACATAAAGCCTCCCCcacaaa
tatttaaaaaagagacattttctttttatttttgcaatACATTATTTCTT
AATGTCAGCTGGAATGAGTTCTAACTTGatatttttattagaaaattGCA
TCCATGTTGACACCCACTCGTGCAAATTCACAGTAATCTTATTaaaaatg
acagttttttaAAATACTTATGCTAATGCATTGTCTGACAAAAGAAATTT
ACAGTTTGTAATTAAGTGATTGACTTAAGTTTTTGCAGCATGCACTTACT
TAGCTACACTATGTTTATTAGTTTATCATGAATAGCCGAAATTTTTTATT
ACTAAATTGTCAGCCTTGAAAACTATTGACATctaaaagaaaatctattt
tGTATTGAAATGAAAGAACCATCATTTTCCTAGTACGTTACCTAGTCCAT
CATAAAACTTTTGCTAACATAAGTTCTCTCAGTagaatcaataaaaaata
acaattttgcTGGTGTAGTTAAGCccaattacacgtttttttataaggac
agaAGGAGCCTTCGGTTCTTCTTAACTTCTGAGTtttaaaccttaaaatg
tttttattttcaccattttgtgggtattttttaaattttcctatgaaatc
gggtgttttattGTCCataaagcctcaaaatgttcttaacttgttcttaa
tattttggctatcgaagccttatgttcttataaagtttgttcttatatta
acaaaaaaaacgtgtaatttcaTTTCCTATCTGTTCAAAAGCGGATTTTG
GTCTTATAAATTTTACTTACTGTATAATCTTTGCTTTTGACTAAAATATT
GTAATCGGagattgtttaaaatatttaaaatattatgaagaaattatgat
tttaaattattaggtaaatgattatttttgactgATATCATATTAAATTG
TTTTAGTGCGTTTTTTGTATTTCCtctcgttttttttattttgtgaaaag
tagactaattaaaattttaaacattattttttgGCCTTAGTTTTTGCTTT
TAGACTTATAAAATTGTAGAGAATAAAATATGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014459-exon-sc0000187-1491911889:252130..253463 | TCONS_00014459-exon-sc0000187-1491911889:252130..253463 | Clytia hemisphaerica | exon |
| TCONS_00014459-exon-sc0000187-1510915933:252130..253463 | TCONS_00014459-exon-sc0000187-1510915933:252130..253463 | Clytia hemisphaerica | exon |
| TCONS_00014459-exon-sc0000187-1575043694:252130..253463 | TCONS_00014459-exon-sc0000187-1575043694:252130..253463 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:252130..253463 . |
Blast
The following BLAST results are available for this feature:
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