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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014432 ID=TCONS_00014432|Name=TCONS_00014432|organism=Clytia hemisphaerica|type=transcript|length=474bp
AAATAACTCCGTTGCACTcaagcAACGAACGGAGACAGGAAAAAATTGGA
CAGAGTCTCCCACACAGACAAGATCCGGGATCCCGTGCGCGTTAACATGA
ACCTTACTCAACAATGATTTTAGCATGAGAAAACAATATGTTCTATTTGT
GATATCAAAGTGACGTTCAGAAGATGTTGAGAATGGACCAAATCGTGTTG
TATCATTAATGGAAAATTTTGCACGCACCTAGTGTGAAATATATCATAGG
AACCTATTTTTTGCAAAACATCTCTTGAAATTAGGACCTAGCCCCCTATT
TATGAGCTAAACCATATTTAATATTTACTATTGTCATTTTGAGATCTATT
GTTGATCGTCGCTGAAAGGCTAATtacgaatttgaaaaatattatctATG
ATAGAGAGCtgacatattcaattttcacccCATATATAGATTTAAAGAAC
TCCTATGTAGGAGGGATGTTAAAA Run BLAST on NCBI transcript from alignment at sc0000187:271849..281077- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014432 ID=TCONS_00014432|Name=TCONS_00014432|organism=Clytia hemisphaerica|type=transcript|length=9229bp|location=Sequence derived from alignment at sc0000187:271849..281077- (Clytia hemisphaerica)
AAATAACTCCGTTGCACTCAAGGTAAGTGACCTACCAATACAAAGCCCTT
TTTTAATGGTAATTTTCAAACTTCTGAAAGTATGCTGTAAAGGGTGTACA
GTTAACCCCCCTTTTTCAAACCTCTATAATGCGAATCTTTCTGTAATTCG
AACTAAAACATTGGTCCCCTCAGCTGGAAAATAGTGTAAAATACTCTTTA
TATTTCGAATTTTTCTCTGATTCGAAGAATTAGATTTATACCCTCTGGAA
GAAGGAATTAAAGAGAGGCAACTCTTGGTGTTATGTTTATTTTGCGTTCT
CGAGTACCTGTTTTCTCTTTCAAAACATTCAGCATTTCGATTTAGTGGTG
AAACCGATTAAAATCTTCCTAGAAAATGATAGGCTTTTGACCATTTTGTG
CAAAGAAACTGTCCGCTTATTGGAGTTTCCGTTAATTGAGTGTCCGCCTT
TTGGAAACTTTTTTATAAGGTTTTGACTAGGAATCTGCCGGGGAAAACAT
TTTGTCTGCTATCAGGGGTGTCCGCCTTTTAGAGTGTCCGCTAATTAAAG
GTTACACTATATTATCTTTATCTATAATTGTCATAGCACGAGCAAGGGCT
CGGGGGAGGAAATCCTTATTTATTGTACACTTTATGTTTCCGTTCTTTAT
GTCTACAATCCGGGTCAAAATATTTGAGAAAAAACGAAAATTTCCACGAT
TAGGAAGCGCTCTAAGTTAGGTTATGAGGGTAGAGTTTCGATTCTGAGTT
TTAGGGCCTTAGCGGGATAAACCCCTCTTAAATTGAAATATTCGATCACA
TTTAACAAATAGCCCAAAATCGACTTGCTCGCCCGAATTTAAATTTCTTA
AAACGAGGAGATAACCAAGATTCTCAATATATTTTGACCGGGATCGTACT
TACCTACAAAATTGAGGGGCTTTATCTGGTCTTCAGTGACATTATCAAAA
CTAGCCCGAAATGCGTTCAAAGTCGTTGAAATCCATTGGTAGAAAGCCAG
TCCTTTAACGTGAAGAGCACCACGTCCAATGTATTTGATGTGATCAAAAT
ATTTGTGTTTTTCGAACTCTACCATAATTTCTTTAGAGAGATGTTCCTCC
ATGTTAGTTAAGAAATGAGTATCCATCATAACCTATAATAATGGTGAATT
GTGGGTTTGATTTTGATTTTAGTATCTTTGCTTGCTTGAAATGTTAGACT
GGTTTGCCCTGGCCTTAATACTCGAAGTTTATTGACGTTTTTGTTCACTT
TAATACCACTTTTTGAATGTTGTATGAAATGTTGGGCAGGTTTGTGTGTC
TATGTAAAATTTTCAAAAAACGGTAAAAAAGAAGGAAAAAGTGATGGACG
AAGTTTGTTTCGCCAAACATTTGATCCAACATTTGCGGCATAATCAATGA
CTTTTTTAGATTTTTATTAAACGTTTTTAGTTTTTCATCCAACATTTGAA
ATGTTGGATGAAATGTTGGACTGGTTTACTTTGGCTTAAAAGGTTGAAGC
AAAGAAAGGCGATTTCACCACCGGGCTATCTATTAGTATTTGTCTATTTT
TAAAAGTCAAAATCAATTAAATGTAAGCTTTTTTTGACTTGCGAGAATAA
GTCAAGTGGTTCCTTTACTAAATGACTAAATTTTACAACACCAAAGGTAC
AATAATTTCTTTTCTAAAACACTAACCAATGAAATGAACGCAGCCATCTC
TTCCTTCGATTTAATGTTACCTATCTTCACATCCATTGCGAAAAACAAGA
ACATCTGAAGAGCCCGATCTTCGTTTGACGTGATAGACAAGAACTGCTCT
CTGGTCATGAATTCTGGCGATTCATAATTCTTGAATTTACGGGTCAGCTT
TTTATCAATAGTCTGCATAGAACAACAGTATAAACCCATATTTTTGTATT
GCTTACAGCCATTCATTGAAACGGCATGTTGACGACAGTATTGGCTTGGA
TGTTTGAAACAGTGTGCGAATGAGGCCGAGACATGCGGCCTTGATGTGCC
ATAGCTCAGTTTACATTTCCATTGCGCCATTTTGCTCTCGTATTCCATAT
CTTTCTCCTCTCCATTGAGGCCTGTAGAAAAATTATAAAGAAACTCAATA
TTTAGGATAAATGATATATATACAATTTAGCTTTCTTAGTGTGTTTTTTT
AGAGTTTTGAGCACTCTGGTGACAACAGCAGTCTATGCTCGCTTACCAGA
GCTGCACTGATGAGTCATGGGAAGGCCAAAACACGTGTCCAGTGGCGTTG
TGGTAGGGGGGGCCGGGGGGCCATGCTCCCCCCCAGCGGAGCTTTTTTGA
AGGGGCGCCGAAGAGCAAGGGGCGCCAAAAGAGTTTTTTTAAACGCCTCA
ATCTTAAAAAGCATACTATATGCGCCCCAGGACCAATTTTACTGAGATAA
TTTTAAATTTCTTACAATATTGAAATGATAAAACATCAATTTTTTCGCTC
GCTTCTCTCGTATTACACATTGTTTCTTCAAGTTTCTTTTCACTCTAGCA
AGTGTCAAAATTGTCTATTTTTATTTAGTGATTTGGGGCATCTTGGTAGT
CGATTTTCAAAATTTTCTAGTCGGTCCCAGCCATGGAGGGGCCTGTTTAT
CCCTTTTCCATTCATCAAAGACATATCTACTTTTATCCACTAAATATTTC
CTTCCTCGTTATTCCTAGTCAAATGAATTAGTAAAAATTTTGAAACTGGT
GGGCGCCACTTTGGAAAATTGGGGGGGGAGGACGCCATTTTAAAAAAATT
GACTCTGGCCCCTCCAGAAAAATTTTCCCACAACGCCACTGCACGTGTCT
GCAGATAGATGTAGTTAGCTTATGTATCATCACTAGGACGCTAGAAAATG
TACTCTAGAACGTTTCAGGACATTTAGGAACGATCGAGAACGTTCCGGGA
CGCTCCAGGAACGCTATAGAACGTCCGTGAATGTTCAGGAACGGAAATCG
CTTGAGACTATAAGACTATAATTATACCGCTGATAATTCCATATTTTCAT
TATTTTTTCAGCAACGAACGGAGACAGGAAAAAATTGGACAGGTAAGAAC
CGTTCGTTTCTCCAAGTTTTAGTATGTACTAAAAAGAGGGAAGCTTGCTA
ATGGTCTCTTCTCGTTACAGGTAGGACCTTCAGAGTCTCCCCATTGTAGC
TTTAGGTAGACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGTTCGCAAT
GTTGTGGGTTCAACCACCAGCCTGGTCATACCAAATATTCTCAAAATGGT
ACTTGATGCCTCTCTGCTTGATGCTCAGCAATTAAGGGAAGGATCAAGGG
TAAGTGGAGAAATCCAGGGAGAAAGAGTGGCGCCCTCCCATACCTTCGGG
CAGATAGCTATCGGAAGAGGAGCCTTTGGGTTGTCTCCGACTGCGGTCGC
AGACTTACTAGCTTTAGGTGGCGTTTGAGAGGATACTGGTACAATAATTT
CAAATTTNTAAGAAATGAGTATCCATCATAACCTATAATAATGGTGAATT
GTGGGTTTGATTTTGATTTTAGTATCTTTGCTTGCTTGAAATGTTAGACT
GGTTTGCCCTGGCCTTAATACTCGAAGTTTATTGACGTTTTTGTTCACTT
TAATACCACTTTTTGAATGTTGTATGAAATGTTGGGCAGGTTTGTGTGTC
TATGTAAAATTTTCAAAAAACGGTAAAAAAGAAGGAAAAAGTGATGGACG
AAGTTTGTTTCGCCAAACATTTGATCCAACATTTGCGGCATAATCAATGA
CTTTTTTAGATTTTTATTAAACGTTTTTAGTTTTTCATCCAACATTTGAA
ATGTTGGATGAAATGTTGGACTGGTTTACTTTGGCTTAAAAGGTTGAAGC
AAAGAAAGGCGATTTCACCACCGGGCTATCTATTAGTATTTGTCTATTTT
TAAAAGTCAAAATCAATTAAATGTAAGCTTTTTTTGACTTGCGAGAATAA
GTCAAGTGGTTCCTTTACTAAATGACTAAATTTTACAACACCAAAGGTAC
AATAATTTCTTTTCTAAAACACTAACCAATGAAATGAACGCAGCCATCTC
TTCCTTCGATTTAATGTTACCTATCTTCACATCCATTGCGAAAAACAAGA
ACATCTGAAGAGCCCGATCTTCGTTTGACGTGATAGACAAGAACTGCTCT
CTGGTCATGAATTCTGGCGATTCATAATTCTTGAATTTACGGGTCAGCTT
TTTATCAATAGTCTGCATAGAACAACAGTATAAACCCATATTTTTGTATT
GCTTACAGCCATTCATTGAAACGGCATGTTGACGACAGTATTGGCTTGGA
TGTTTGAAACAGTGTGCGAATGAGGCCGAGACATGCGGCCTTGATGTGCC
ATAGCTCAGTTTACATTTCCATTGCGCCATTTTGCTCTCGTATTCCATAT
CTTTCTCCTCTCCATTGAGGCCTGTAGAAAAATTATAAAGAAACTCAATA
TTTAGGATAAATGATATATATACAATTTAGCTTTCTTAGTGTGTTTTTTT
AGAGTTTTGAGCACTCTGGTGACAACAGCAGTCTATGCTCGCTTACCAGA
GCTGCACTGATGAGTCATGGGAAGGCCAAAACACGTGTCCAGTGGCGTTG
TGGTAGGGGGGGCCGGGGGGCCATGCTCCCCCCCAGCGGAGCTTTTTTGA
AGGGGCGCCGAAGAGCAAGGGGCGCCAAAAGAGTTTTTTTAAACGCCTCA
ATCTTAAAAAGCATACTATATGCGCCCCAGGACCAATTTTACTGAGATAA
TTTTAAATTTCTTACAATATTGAAATGATAAAACATCAATTTTTTCGCTC
GCTTCTCTCGTATTACACATTGTTTCTTCAAGTTTCTTTTCACTCTAGCA
AGTGTCAAAATTGTCTATTTTTATTTAGTGATTTGGGGCATCTTGGTAGT
CGATTTTCAAAATTTTCTAGTCGGTCCCAGCCATGGAGGGGCCTGTTTAT
CCCTTTTCCATTCATCAAAGACATATCTACTTTTATCCACTAAATATTTC
CTTCCTCGTTATTCCTAGTCAAATGAATTAGTAAAAATTTTGAAACTGGT
GGGCGCCACTTTGGAAAATTGGGGGGGGAGGACGCCATTTTAAAAAAATT
GACTCTGGCCCCTCCAGAAAAATTTTCCCACAACGCCACTGCACGTGTCT
GCAGATAGATGTAGTTAGCTTATGTATCATCACTAGGACGCTAGAAAATG
TACTCTAGAACGTTTCAGGACATTTAGGAACGATCGAGAACGTTCCGGGA
CGCTCCAGGAACGCTATAGAACGTCCGTGAATGTTCAGGAACGGAAATCG
CTTGAGACTATAAGACTATAATTATACCGCTGATAATTCCATATTTTCAT
TATTTTTTCAGCAACGAACGGAGACAGGAAAAAATTGGACAGGTAAGAAC
CGTTCGTTTCTCCAAGTTTTAGTATGTACTAAAAAGAGGGAAGCTTGCTA
ATGGTCTCTTCTCGTTACAGGTAGGACCTTCAGAGTCTCCCCATTGTAGC
TTTAGGTAGACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGTTCGCAAT
GTTGTGGGTTCAACCACCAGCCTGGTCATACCAAATATACTCAAAATGGT
ACTTGATGCCTCTCTGCTTGATGCTCAGCAATTAAGGGAAGGATTAAGGG
TAAGTGGAGAAATCCAGGGAGAAAGAGTGGCGCCCTCCCCTACCTTCGGG
CAGATAGCTATCGGAAGAGGAGCCTTTGGGTTGTCTCCGACTGCGGTCGC
AGACTCACTAGCTTTAGGTGGCGTTTGAGAGGATACTGGTACAATAATTT
CAAATTCCGTCAACTCATTAGCACTATTTTCAAATACGACCGCAAGATGT
TGGCTGCGCTGTAGGCTATAAGAGATTTTCATGCTCTCTTCTTTTCGCAC
TAATTTGAAAGAATCACCGCTGGATGCACTGTAGCCTGTACCATAATCTT
TTTCAAAATTCGAATTACTCCTCTAGTGTGTAAAGGAATATAATACTTTA
AGGGCAGAAACTTTCGCGACTTTTCGCGACATTTGCCTTTTTTTCAAGAA
AGTTATATCCGCTGAATTCGTTCCATAAGTAAAATTCGCGAACCTCGCGA
AAGTTTCTGTCCGCGAAAGTTTCTGCTCTAAAAGTATTTAACTTTTTTCA
CCCTAATGCAATGGTATTGTTTTGTTTTTTCTTTCAAAAAAAATTGCCCA
TACACGTTCGGATAACTGGTTGCTACAGGCTAGATGCACTAACCCCGTTG
AGTTTAAAGCCCGAAGGGCTAGAGTAGAGGCAAGAAAACGTGAAGCCAAT
TTTTTTTCCATTCAGAACGCGCCTAAAACGCGCCGTAATCATGAGGACGG
ATTGTATCTAGCGGTTCCTTTGTTTTTGGGGACTGCATTTTTTAGAATCT
AGCAATAGATTTTACTTTCAACCCGACGTTTGTGTAAAAACCAAGCGCGG
GCATTCTGGATGGAAATAAGTAGTTTCATTTCCCGTCTAGGAGTCTCGAG
TCTAGCCCTTCGGGCTTGGAAGTCAATGACTACCCTCACTGCATCCTGAC
TGAAAGCGGTTGCAATTGTCTCCTTTTTTATACAAAACAGGAGATAAATA
TAGGACGAGAAGAAGACTAAAGGATTGACATTTTTTATCAAAGAGCTCCA
TCCAGTTTTAAAGATTGAGCTTTTTTACGGGCAATTTTTTGATTTTTGTA
ATAAGCCAGGCTTAGCATTGACTCTTGACTTTAACTTAAATTAACTCTTT
CTTGCTTCATCATCAAGAATAGTTAAGACTTGAGAATGCAAAATATTTCA
TCATTTTTGATTTTTCAAATTGTATGTCCTCCCGGATATCCATGAGTTGT
CCATGAACCCCCTTGGATATCCACAAAAATAATATGCCAAATCCGCTGGT
AATCCAACTTTTTTTTGATTTTGTATCTCGCTTTGGATGTCCTTTTGGAT
GTCCTTCTCAAAACCCCATACAATTTTTTTCTGGGAGCCCCCTCTTTCTA
GAAAAGGGGTGGTAGAGCCTCCTCAAAAATCACAAAAAGGGAGGGAGGGA
TACTGTAAGTAATAACGGTTTTCAAAAGAATTGGAAAGGAGAGTAAGGGG
TAAAGGAAGGGTATAGAAAATTTGATAAAAAAGCTTTTTAAGCTATTGGC
CAAGAAATTTACGGGAAAGCTTCTTTCAGACAAGCTTCAGAACTTTTTTT
TCGGTTAAGTAAAGACCCCACTGCACACTATGAGTCAGAAAATTATTTGC
AACAACTTTTTAATATCAATTTGAGATATGACATTGTCTTGAGTAGACAT
TACGATTACGTAGCGACGCTTACCTCGTTTTCAAAATATTGCTACGGTAA
TTGATTCCCAGAGGAGTTCATAATAAGTTTACTTGATTTATAAAAGAAAC
ACTTGACGACTGAAGGGATTAAATTAGCTGGTAATGGTTTCAAAACGAGG
CAGCTGGTAATGGTTTCAAAGCGAGGCAGCTGGTAATGGTTTCAAAGCGA
GGCAGCTGGTAATGGTTTCAAAACGAGGCAGCCGCTACACTCAAAATACA
GTAGACTCTCATTAATTCGAACTTCTGTAATTTGAAACTTTCTATAATTT
GAACAATTTGTCCTCCTCCTTCAGACAAATTCTCTCGCTAACTCGAATTT
TTAATGTGTAAAGGGGTTTGAACTCATTCGAATGCTATAAAGATTTGAAA
TTTATATTTAATTTTTTTTATTAAATACGAAATTTTCAATTCGAATATTA
GAGCGGGCTTATTGAATATTTATATCAAGATTTTAAAAGTTATTTTTAGC
AGGGGGGTCGGTAGTAAAATCTCGTACATATATGAGTAGTAAAAGGATTT
TTACGAATTTTTACATACCACCGCCCAGACTCTTGGAAGAGGTATTTTAT
TACCCTGGTAGTAAAAGCTTTTGGGACAATTTGTCCTAAAGACCACCTAT
TTTTTGGTTGCTTTTCGGACTGATTTTACAAAAGAAGCTAAAAAATGATT
ATTTCTGTGACACATTTTTCACTTTGTGCAAAAATTAATGTTTTGCCCTT
AGAATTAAATTCTTTTTTATATTGACAAAAAATCTCGAGAATTTTTTGTT
TGCAGCAAGCAACTTTCGAACAGAAATTTTTTTCAAGTTTTCAGATTTTT
TCAGAAAAATCATCCAAAAAATTAAAAAGAATTACAAAAATAGCTAAAAT
TTGCTAAATTTACCAGTTTTAACTACCCAGGTAGTAAAATTTTTTCAACA
TTTAACACATAAACCACCCATTTTAGTATTTAATTACCCTGGGTAGTAAA
TTTTTTCGATTTTTCGTCACACCACCACCGTAGTAAACATCATTATGTCT
GAGATTTTACTACCGACCCCCCTCCCCCCCCCCTGTTTTTAGCGTTCGTG
AATTAACGTTTTATTCAACTTTTTATCTCGATCATTTTTAATCATTTAAA
GTTTTCTCCGTAATTCGATTTTTTAGCTTGCTTAAGCTGGTTATTCGAGT
TGGAGAGACTTTCTACAATTCAAATTTTTCTGTAATTCGAATAAATTATT
TCCCCCCACCTTGAAATTCGAATTAGAGAAAGTCTACTGTAACAGATGAA
AAAGTTCTATAGTCACAAAGTGCCTCAAGACCTTGTCGGAAATCCTCAAA
AAAAACAACAATTTAATTGACTTAACAGACAATCTAACATGGCTTATCTA
AATATAAAAGTTAAAGCTTACACATTGAATATTAGGTACAAAAAGGTTTA
AAAAATGAACGCTAGATAAGTATTAATATTATGTTACTATTTTTAACATC
TTTTTTAGAGTCTCCCACACAGACAAGATCCGGGATCCCGTGCGCGTTAA
CATGAACCTTACTCAACAATGATTTTAGCATGAGAAAACAATATGTTCTA
TTTGTGATATCAAAGTGACGTTCAGAAGATGTTGAGAATGGACCAAATCG
TGTTGTATCATTAATGGAAAATTTTGCACGCACCTAGTGTGAAATATATC
ATAGGAACCTATTTTTTGCAAAACATCTCTTGAAATTAGGACCTAGCCCC
CTATTTATGAGCTAAACCATATTTAATATTTACTATTGTCATTTTGAGAT
CTATTGTTGATCGTCGCTGAAAGGCTAATTACGAATTTGAAAAATATTAT
CTATGATAGAGAGCTGACATATTCAATTTTCACCCCATATATAGATTTAA
AGAACTCCTATGTAGGAGGGATGTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014432-exon-sc0000187-1575043694:281056..281077 | TCONS_00014432-exon-sc0000187-1575043694:281056..281077 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1575043694:275686..275716 | TCONS_00014432-exon-sc0000187-1575043694:275686..275716 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1575043694:271849..272269 | TCONS_00014432-exon-sc0000187-1575043694:271849..272269 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1510915933:281056..281077 | TCONS_00014432-exon-sc0000187-1510915933:281056..281077 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1510915933:275686..275716 | TCONS_00014432-exon-sc0000187-1510915933:275686..275716 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1510915933:271849..272269 | TCONS_00014432-exon-sc0000187-1510915933:271849..272269 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1491911889:281056..281077 | TCONS_00014432-exon-sc0000187-1491911889:281056..281077 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1491911889:275686..275716 | TCONS_00014432-exon-sc0000187-1491911889:275686..275716 | Clytia hemisphaerica | exon |
| TCONS_00014432-exon-sc0000187-1491911889:271849..272269 | TCONS_00014432-exon-sc0000187-1491911889:271849..272269 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:271849..281077 - |
Blast
The following BLAST results are available for this feature:
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