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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014423 ID=TCONS_00014423|Name=TCONS_00014423|organism=Clytia hemisphaerica|type=transcript|length=2977bp
TTActaaatatatgaaaaaatcccaaaatccgTTAGAAATCctaaaaatc
ccaaaaaaaccCTGAAACTCCTTCATAAACAAAATACATAATTAAATAAC
ACGTGACTTAAAGAAGGCAAGTCTTTAGTTTCAAACACGGTTTCAGtacg
aaaaaaaaacttctcgtgtccccaagcctttacttAGTAATTTATATCTA
TATACAACAAACGATTCCATCTTTCTGAATGAAAGAAGACTAATCAAAAT
CTTCTTCATCAACTTCGGAATCTTCAATATTCAGCTCATCCCGTAATATC
TTAACAATCATTGCACTCATCATTTGCTGCATGCGTCCTTCTTCGTCGGT
GTAAAGCATGCCTTTCCCATCATCAACAtcatcattttctgaaaattctc
catcagAATAATCCCACACACCAttgtaagaatcaaaattattaaGTTGA
CTTTCTATATCACCATgaacaaaacagtttttattaAAGAACGACATTAT
TGTACCTTTTTTGAGCGCTGTTGCGACAGCTTTCCATATCTTATAAGCGA
CTTCTATTGGCGATGGATCAACATCATCTGGGTTTTTCTCCATTTCAAAG
AAAAGATAATTCTTCAAATAGTAGGAAGGTAAACTTGGCTTAGTGTGAGA
TTCATAATCTGGATGCTTTATCCAAGCCGCAGAAAAAGATGGCAGCCATT
CTCTAAGAGCCTTTGCTAACATGTATCCTAATTTGTAGCCTGGAGGGCAA
ATATTGAAGATCTTGGTTTCGATTTTGGAAAAGGATATCCGAAACATATC
ATTCTTTCCATAGTAATCATTGCAGTCAAGGTCATCTTTGGGTGGTTTGA
CGACAATAAGGCAGCCTTCTTTTACGGCATCTTTGAGGACTGGGCTATTA
TAATTCTTACCACTCATACATTTCGGCAACCAATCTTTTATTTCCAGGGC
AATTACAAGATCGATTGATACGGGTAGGAATCGATACTTAGGACCAATCC
ATAAAATCTCCATCGAAGCAATCGATGAATTACAATCTGGGCCTTCTTTA
AGGTATATTCCAAGACCATCCCAAATTGAATTCTTGGACGCAATATGATT
TATAATAGTGTATATATTTTGTGTTAATTTTGAAGCCTCCAGATACTCTT
CATTGTTGAAATAGCGTCCCTGCTCCTTGTCGATATCGGATAATCCTTTA
GCCCTGCAAAATCCTGATGGGCAGCTGTTTTCAATTATTCTAACTGTTCC
TTGAAAGTTATCTAGGTAGAGCAGATAATCAAATTCATCAGGATAAGTGA
CTTTTGTACCTTCGCTGACACTGCCAGACAAAACAGGTGTAAATGAAAGT
TTAGGATGAGTCTCCCGAACTTCATCAGCAATACGAGTCAGCAACGTTTT
TATATTTTCGGAAAGCGATTGAAAATCTACATTTTCGTCTATTTTGGGGC
cttctaaaaagtttttaactATGCAAGTCATGACATTTTTTCTATCTTCA
TTGTTTAAAATATGCTCGTCTATATCCTCAATGTCAATGGTTTCTGGTAT
TGTGTTATCCTCGTTAAGCACTTCTACAGGGTCAAGAAAAGAAGAGGTGG
AAGGCTGCAGTGACCCTTTCTCTTTCAATAACTCAATAACTTCACAAGAA
TTTATACCGCGAACAAAATCAATTGGCAAAGCATTATGGTTAGATTCGGT
GTTAACATCAGCTCCGTGTTTTAATAAAAgctcaataatatttttatttt
tcttccagCACGCGAAATGCAACGGTGTCAATTGATTCGAGTCAGCCAAG
TTTGGATTCAAACCTCGTTCTAGCAATAACTTAAcgaatatttcattttc
tttgactACCGAAAACGTAAGCAGATCCCACCCAAAGGAATTTGCTGACA
AGTTTGAAGATTCAAGTAAAGCATCCAAATCATCTGGAACGTTCTGATTT
TTCGATTCAATTATCTTCATTAAATGAGTTCGACCTTTATTATATGGAAA
ATCGATATTTGCACCAAGCTCTAGGAGAAGTTGTCTCTTTCCTTTTTGGA
ATTCTTCATCACCGATGCTACTGTATTGAAAAGCAGTTCTACCATCGTCC
TTAGAAAGTTTGTTGATATCAGCACTATGTCCAACAAGTAATTTAATGCT
TCTTAAAACATCTTTCTCAATGATATCATAATATTTGGAAGGTCGTTGTG
ACGATGAACCATTAGATTCTCGGTCATTTTCAAAGCGAATATCTTCTAGA
AATACTCGTTGACACAAAATCAGAAGTGGCGTTAAGCCACTATTATGAAA
CATGCCATTAATGACACGATCAACCGATGCATTACTCTTTTCTAAAATCA
GTTTCATGGAACCGTAACAAAGGCAGGATGTAGCTTCGTGTAATGGTAGA
TCATCGTCAACATTAAAACCCAAATCAATCAGTTTCTTACACATTTGAAC
ACATATTGGATTTTCATTGTTGATGTGATTTTCAAAATGATGAAGTTTGA
CAATACACCGTGACAGTAAAAATGAAGTTTCATGGTTTGTGACATCATAA
CCTTCTAAAAGAAAGTCAGCTTTTGTTTGATCAAAGGAATGAAACAGATG
AAATAATACAGGTGGATGTGATGTATATCGGTCAGCACCATTAAGTAGCA
ACAGCTTCACGATGTTCGGAGAAACGTGTGATTTACAAGCGAGCCATAAT
GATGTTTCTTGGTCCGAATTTGATTCACCTCTCAGATTTGGATCAGCTCC
TTTGTTCAACAAATATTCACAAATTTCATATTGGTTGCACTCGATAGCAG
CATTCAAAATGCGAACTTGTTTCCCATCTGAATTTTCGACCATAGAATTG
ACATCTAAAGAGCTGCTTTCAACCAATCCACATAATTTTTGAGTTTCCCC
ATTTTTGATTAGATTGAAGATATCCATTATATCATAACATTGTTATTTAG
TAAGTAAAATTATTTATTGGTATCTAA Run BLAST on NCBI transcript from alignment at sc0000187:175033..182272- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014423 ID=TCONS_00014423|Name=TCONS_00014423|organism=Clytia hemisphaerica|type=transcript|length=7240bp|location=Sequence derived from alignment at sc0000187:175033..182272- (Clytia hemisphaerica)
TTACTAAATATATGAAAAAATCCCAAAATCCGTTAGAAATCCTAAAAATC
CCAAAAAAACCCTGAAACTCCTTCATAAACAAAATACATAATTAAATAAC
ACGTGACTTAAAGAAGGCAAGTCTTTAGTTTCAAACACGGTTTCAGTACG
AAAAAAAAACTTCTCGTGTCCCCAAGCCTTTACTTAGTAATTTATATCTA
TATACAACAAACGATTCCATCTTTCTGAATGAAAGAAGACTAATCAAAAT
CTTCTTCATCAACTTCGGAATCTTCAATATTCAGCTCATCCCGTAATATC
TTAACAATCATTGCACTCATCATTTGCTGCATGCGTCCTTCTTCGTCGGT
GTAAAGCATGCCTTTCCCATCATCAACATCATCATTTTCTGAAAATTCTC
CATCAGAATAATCCCACACACCATTGTAAGAATCAAAATTATTAAGTTGA
CTTTCTATATCACCATGAACAAAACAGTTTTTATTAAAGAACGACATTAT
TGTACCTTTTTTGAGCGCTGTTGCGACAGCTTTCCATATCTTATAAGCGA
CTTCTATTGGCGATGGATCAACATCATCTGGGTTTTTCTCCATTTCAAAG
AAAAGATAATTCTTCAAATAGTAGGAAGGTAAACTTGGCTTAGTGTGAGA
TTCATAATCTGGATGCTTTATCCAAGCCGCAGAAAAAGATGGCAGCCATT
CTCTAAGAGCCTTTGCTAACATGTATCCTAATTTGTAGCCTGGAGGGCAA
ATATTGAAGATCTTGGTTTCGATTTTGGAAAAGGATATCCGAAACATATC
ATTCTTTCCATAGTAATCATTGCAGTCAAGGTCATCTTTGGGTGGTTTGA
CGACAATAAGGCAGCCTTCTTTTACGGCATCTTTGAGGACTGGGCTATTA
TAATTCTTACCACTCATACATTTCGGCAACCAATCTTTTATTTCCAGGGC
AATTACAAGATCGATTGATACGGGTAGGAATCGATACTTAGGACCAATCC
ATAAAATCTCCATCGAAGCAATCGATGAATTACAATCTGGGCCTTCTTTA
AGGTATATTCCAAGACCATCCCAAATTGAATTCTTGGACGCAATATGATT
TATAATAGTGTATATATTTTGTGTTAATTTTGAAGCCTCCAGATACTCTT
CATTGTTGAAATAGCGTCCCTGCTCCTTGTCGATATCGGATAATCCTTTA
GCCCTGCAAAATCCTGATGGGCAGCTGTTTTCAATTATTCTAACTGTTCC
TTGAAAGTTATCTAGGTAGAGCAGATAATCAAATTCATCAGGATAAGTGA
CTTTTGTACCTTCGCTGACACTGCCAGACAAAACAGGTGTAAATGAAAGT
TTAGGATGAGTCTCCCGAACTTCATCAGCAATACGAGTCAGCAACGTTTT
TATATTTTCGGAAAGCGATTGAAAATCTACATTTTCGTCTATTTTGGGGC
CTTCTAAAAAGTTTTTAACTATGCAAGTCATGACATTTTTTCTATCTTCA
TTGTTTAAAATATGCTCGTCTATATCCTCAATGTCAATGGTTTCTGGTAT
TGTGTTATCCTCGTTAAGCACTTCTACAGGGTCAAGAAAAGAAGAGGTGG
AATGCTGCAGTGATTTTTTTTCTTTCAATAACTCAATAACTTCATTCGAA
TTTATACCGCGAACAAAATCAATTGGCAAAGCATTATGGTTAGATTCGAT
GTTAACATCAGCTCCGTGTTTTAATAACAGCTCAATAATATTTTTATTTT
TCTTCCAGCACGCGAAATGCAACGGTGTCAATTGATTCGAGTCAGCCAAG
TTTGGATCCAACNCAATCGATGAATTACAATCTGGGCCTTCTTTAAGGTA
TATTCCAAGACCATCCCAAATTGAATTCTTGGACGCAATATGATTTATAA
TAGTGTATATATTTTGTGTTAATTTTGAAGCCTCCAGATACTCTTCATTG
TTGAAATAGCGTCCCTGCTCCTTGTCGATATCGGATAATCCTTTAGCCCT
GCAAAATCCTGATGGGCAGCTGTTTTCAATTATTCTAACTGTTCCTTGAA
AGTTATCTAGGTAGAGCAGATAATCAAATTCATCAGGATAAGTGACTTTT
GTACCTTCACTGACACTGCCAGACAAAACAGGTGTAAATGAAAGTTCAGG
ATGAGTCTCCCGAACTTCATCAGCAATACGTGTCAGCAACGTTTTTATAT
TTCCGGAAAGAGATTGAAAATCTACATTTTCGTCTATTTTGGGGCCTTCT
AAAAAGTTTTTAACTATGAAAGTCATAACATTTTTTCGATCTTCATTGTT
CAAAATATGCTCGTCTATATCCTTGATGTAAATGGTTTCTGGTATTGTGT
TATCCTCGTTAAGCACTTCTACAGGGTCAAGAAAAGAAGAGGTGGAAGGC
TGCAGTGACCCTTTCTCTTTCAATAACTCAATAACTTCACAAGAATTTAT
ACCGCGAACAAAATCAATTGGCAAAGCATTATGGTTAGATTCGGTGTTAA
CATCAGCTCCGTGTTTTAATAAAAGCTCAATAATATTTTTATTTTTCTTC
CAGCACGCGAAATGCAACGGTGTCAATTGATTCGAGTCAGCCAAGTTTGG
ATTCAAACCTCGTTCTAGCAATAACTTAACGAATATTTCATTTTCTTTGA
CTACCGAAAACGTAAGCAGATCCCACCCAAAGGAATTTGCTGACAAGTTT
GAAGATTCAAGTAAAGCATCCAAATCATCTGGAACGTTCTGATTTTTCGA
TTCAATTATCTTCATTAAATGAGTTCGACCTTTATTATATGGAAAATCGA
TATTTGCACCAAGCTCTAGGAGAAGTTGTCTCTTTCCTTTTTGGAATTCT
TCATCACCGATGCTACTGTATTGAAAAGCAGTTCTACCATCGTCCTTAGA
AAGTTTGTTGATATCAGCACTATGTCCAACAAGTAATTTAATGCTTCTTA
AAACATCTTTCTCAATGATATCATAATATTTGGAAGGTCGTTGTGACGAT
GAACCATTAGATTCTCGGTCATTTTCAAAGCGAATATCTTCTAGAAATAC
TCGTTGACACAAAATCAGAAGTGGCGTTAAGCCACTATTATGAAACATGC
CATTAATGACACGATCAACCGATGCATTACTCTTTTCTAAAATCAGTTTC
ATGGAACCGTAACAAAGGCAGGATGTAGCTTCGTGTAATGGTAGATCATC
GTCAACATTAAAACCCAAATCAATCAGTTTCTTACACATTTGGACACATA
TTGGATTGTCACTATCGATGTGATTATCAAGGTTATGAAATTTTCGAATA
CAATATGAAAGTATCTTCGAGGTTGTTAAATCATCATACTGTTTTACATC
AAAGTTTTCCAGGAAACAATCAACTTTCTTTTGATCAAATGTTTGTTGCA
ATAAATCACTAAGTACGGATAATGTTCTGTTTGCATCATGATCTATCAAA
AGTTGCATGATGTTAAGAGAAACATGGGAATGGCAAGCATAAAATAATGA
TGAACCATCTCTCCTGTGTTTTTCTTCATCTTCTAGATTTGGATTAGCTC
CTTTGTTCAACAGATAGTCGCAAATTTCATATTGGTTGCACTCGATAGCA
GCATTCAAAACACGAACTTTTTTCCCATCTGAATTTTCGATCATAGAATT
GACATCCGAAGAATTGCTTTCAACCAGTTCGTATAATTTCTGAGTCTCCC
CATTCTTGATAAGATTGAAGATATCCATCATACATATTGTTATTTAGGAA
GTAAAATCATTTTATTGGTATCTAAACGAGAAAAAAAATTGAAATCATTG
AAATGTTATTTGTGAGTGATCTGCGAGTACTAGTAGTTACATGGCTGATT
GCACTATATGAACAAGGAATTACACTGCAAAATTTCAAAAAAAAATTATA
GACACACAAAAGGTCGAAATTATCAAGAAACTCGTTACAATAGACCTTAT
TGGAGTTTTTGATTTTTATAAAAAAGCGATGGATTGTGGGATTGTTTCGA
GTGTATTACAATGGAAATCTCTTAGGAAATCCTCGAGGGAATTCTATTGT
AATAAACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAA
AACTCCGATAAGGTCTATTAGAATTAACCCTTTAAACTGCCGTGGCTTTT
CTTTACACCCTCGACCTATTTGCCAATGTCGGCATATGCCGACATAAGAA
AAAAGTAGCGATTTTCATTTCATTTTCTGAATAATATATGAAGTTTAGGA
TTAATTTTTGACCATCAAAAGTGACGTAAAATGATGCTCTCCTCTCAAAA
GACACTTAAATAAATATTAAAAGCACAAAAAAATTACACGTGTTGATAAC
AGCATAAGTACCCGAAGCCAAAAAAAAAAAAACATTCTAAGAACATTTCA
AGGCTTCGCAGATTCTAAAACGTGCAAAGAAAATGATGGAAATATGAACA
CTTTTATTTAAGAACAATTTTACAGTGTACTACGCTTTACACTCAAAAAA
CATCCCAAAACTTCGAAACTTTTAGACATTCTGATAAAAAACAACAATGT
GTCATTTAAATAATATGAAGAGGGGTTTATATTGATAACATATAGCCCAA
GTTTACAGTAGCAGGTGGGTTAACTAAAAAGGCAATTTTTAGAAGATTTT
GGCGCCGCTTGAGTTTTGAGTTTCTCAAAATTGCATTTTTTTTCGGAGTT
TGTTTTCTTCTAAGTTTTAATCAATGTCTTGGCTGGAAAAAGATTTATGA
CTGTGAGAAAAATGAATTACAAATACCGTGTAGCCATTTGCTGAAAATTT
ACAAAAAAAATAAAAAATTACCTGCAGCTAAAATTTTGTGAATTTGTAAT
GACAAAAAAAAATTAAAAATAATTATGATAAAAAATAATTATATAAAAAA
CCGTTCAATGCTATTTAAAAATGTATTCTTTTATTGTAACTGTAATTTAA
GAAGAACAAAGTTCTTTTAAAGTGCTCAATACAACTTCTTCATTTCTTGA
AAAAAAAAAAAATTTCTCCGTCAAATATTGAGCATTGCCATTTTGCATCT
TTGTGGAAAAAATCATCCAATCCCGATAAAAGCTTGTAACAAACGGAAAA
ACAAAAGAAAGGGCGGACGGACATAGTTAAATTCATTAAACCTCAAGGTA
GGCCCAAAAATTAATCATCAGAGTCAGTCAAATCCGTAAAATCCGTCAAA
TCCCATTCTTCCATCATTTTCTTCAGAGTCTCTTTCTTACAGCGAATTTG
ATCAGGTGTCCTCTGGAGCAAAACTCTTCGTAAAATTTCACTGATGATCC
AACTAATTGTACGTTTCTCATAATTCTCTCGATCACATTCAAGCTCTGGA
CTGTTATCCAAAATCATATCACCAAACTCATTTTTACCATAATCATTAGG
TAATCGAGACCTTTTTCTAGGTAGAATCCAAGACCATCCCAAATCTTGTT
GTCAGAAATAATAATATTGATAAATGTGTAGAAAAATTCTGTTATCTTTG
TACTTCTAAGGTTGCCTTGTTTGTCAAAGTATACTTCGTACTCTTTTTTA
ATATTTGGTTGTTTTTTAGCCTTGCAGAAACCAGGAGGACTTCCGTCTTC
AACAATTTGGACAATATTATGAAAGTGATTAAGACATAGCAAGTAATCAA
ATTCATCAGGATAATCGACTTTTGTACCTTCGCTGACACTGCCAGACAAA
ACAGGTGTAAATGAAAGTTCTGGAAAGATCTCTCGAAAGCGGAAGGTAAT
CCTGTGTAACAAAATATGAACACGCATCAAAATCAATGCGTAATTTTCAC
TGTCCTTTAATTCTGGGCGTTTTAAAAACGTACTAACCTTTGTGTGAAAC
GTACACATCTCATCCTCGCTGCTCTCGTAAACGGTGCTAAAGGGTTTCGC
TTCTTCATTCTTATCACTTAATACTTGGTTGAAGGTGAAATCTGACGATT
CTTCAGAGACATCAATAGAACCATTATCCATCAGCAACTCTTTGATTTCA
ATCGAATTCGGACCAAACACATAATGACTTGGTAAACCTCCAAACTTATC
CTTAGCGTTAACACGTGCACCATATTTTAAAAGTAATTTAATGATATCGA
TATTCTTTCTCCAGCAAGCGAAATGTAACGGACTCATTTTATTTGAGCCA
ACAAGATTCGGGTCGAATTTTCGGTTCAATAACAACTCGACAAACCTTTG
GTTTTCAATGTATACCGAAAAAGTCAGCAAATCCCATCCGAAGCAATTTT
GAAAATCGGAGGAATCCATCAAAAAATCAACATTATCTTTGTCATCAAAA
TCGTCATTTTTCTCAATTAATTTCATCAGAAGAGTTCGACCTTCGTTATA
AGGAAAGTCAATATTTGCTCCTAGCTCTAATAAAACTTCTTTTTCTGCTA
AACGACCAGTTTTGTGAACGATATTAAATGCTGTTTGTCCTTCATTACTG
AGTAGATTGATATTTGTACCATCTCCAGCTAGTAGTAAACGAATGCATTT
CAAAACCTCTTCTTGTTTTTCAATTGGATCTAACTGAATTTGGCATAATA
TATGAAGTGGTGCCAAACCTAGTTGGTTCAATTCATTAACGGAAATATTA
CTTTTTTCTAAAATAATTTTCATGGATCCGTAACAGAGACAACAAGCAGC
TGTATGCAACACGTCCTTCTCGACATTAAACCCAATATCAGTCAATTTCT
TACACATTTGAACACATATTGGATTTTCATTGTTGATGTGATTTTCAAAA
TGATGAAGTTTGACAATACACCGTGACAGTAAAAATGAAGTTTCATGGTT
TGTGACATCATAACCTTCTAAAAGAAAGTCAGCTTTTGTTTGATCAAAGG
AATGAAACAGATGAAATAATACAGGTGGATGTGATGTATATCGGTCAGCA
CCATTAAGTAGCAACAGCTTCACGATGTTCGGAGAAACGTGTGATTTACA
AGCGAGCCATAATGATGTTTCTTGGTCCGAATTTGATTCACCTCTCAGAT
TTGGATCAGCTCCTTTGTTCAACAAATATTCACAAATTTCATATTGGTTG
CACTCGATAGCAGCATTCAAAATGCGAACTTGTTTCCCATCTGAATTTTC
GACCATAGAATTGACATCTAAAGAGCTGCTTTCAACCAATCCACATAATT
TTTGAGTTTCCCCATTTTTGATTAGATTGAAGATATCCATTATATCATAA
CATTGTTATTTAGTAAGTAAAATTATTTATTGGTATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014423-exon-sc0000187-1575043694:180677..182272 | TCONS_00014423-exon-sc0000187-1575043694:180677..182272 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1575043694:179036..179881 | TCONS_00014423-exon-sc0000187-1575043694:179036..179881 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1575043694:175033..175567 | TCONS_00014423-exon-sc0000187-1575043694:175033..175567 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1510915933:180677..182272 | TCONS_00014423-exon-sc0000187-1510915933:180677..182272 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1510915933:179036..179881 | TCONS_00014423-exon-sc0000187-1510915933:179036..179881 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1510915933:175033..175567 | TCONS_00014423-exon-sc0000187-1510915933:175033..175567 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1491911889:180677..182272 | TCONS_00014423-exon-sc0000187-1491911889:180677..182272 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1491911889:179036..179881 | TCONS_00014423-exon-sc0000187-1491911889:179036..179881 | Clytia hemisphaerica | exon |
| TCONS_00014423-exon-sc0000187-1491911889:175033..175567 | TCONS_00014423-exon-sc0000187-1491911889:175033..175567 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:175033..182272 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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