TCONS_00014365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014365
Unique NameTCONS_00014365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1511

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014365 ID=TCONS_00014365|Name=TCONS_00014365|organism=Clytia hemisphaerica|type=transcript|length=1511bp
tttgggggccgtctctgttttgggggccatatactgtagctTTTGTGTAC
TTTTTATAGGgaaaaaaatgataataagaaaataaaaatcagcaaaataa
tTTATGGTGAGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAG
GCAGATGAGCTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTAC
ATCCAGATTTCTTCAATGAATATCCAAATGAAAAGcaaATAAATGAGCAA
TCCCTGAAATTGCTGCACTCACATGTGGACACCATCAAAAGCGGTGGCTC
AACTGCAGATACATCCTTGACTTTCTACAAGAAACACAAGGAATCAGCAA
CTGGACTTTCAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCA
ATTTATCAAGAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGA
AGTAGTCTCTGGTGATAACAACAATGTGGATCATATACAAAATGTTGAAC
CGATGGATCTTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTG
GATTGGGTCACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTC
AAAACCTATACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATA
ATTTTGGTATTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCT
ATTAACAGCTTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaaga
aaaaagcttTCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTG
GTTTAGATCACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAA
GTCTGGAAagagGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGA
TCAAATCGAAGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTC
GTTTTGTGAATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTAT
AAATCCTTACTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGG
GGATAAAAGTTTCAAGAATTTGCTCGCTTTGTTTGATTGgGATGATTCCT
TTGTTGGAGTTTCGAAGGAAGGCTTTCTGAAAATTCCACCTTTAACcagt
aaaataattttatttgattACATCTCAAAATACCAGGACACAATAGTTGA
AACAAGAAAGAGTTACCTCCGaaatatgaGGTTTGAACATAAGATAATGA
ATGAAGCAAAAACAGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTG
TTGGATACAAATGAAACAATACAAGCTTGCCAAAAGATTATTAATCAATC
AAACTTGTTAGATTTATCAGGTTGCAATGTCATGATCAGTAGATACTATG
ATATTTCTCCTGATGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGA
CCCCTTATTTTACAGTACATACTTGTgtaaagattttccaaatatttaat
ACCCTCCCTTN
Run BLAST on NCBI

protein sequence of Conserved uncharacterized C3orf23 protein

>TCONS_00014365-protein ID=TCONS_00014365-protein|Name=Conserved uncharacterized C3orf23 protein|organism=Clytia hemisphaerica|type=polypeptide|length=448bp
MVRNLLAKCLLNRQVRQMSSLKKGMKEFYLAVHPDFFNEYPNEKQINEQS
LKLLHSHVDTIKSGGSTADTSLTFYKKHKESATGLSAIRLKLKTNSTTSI
YQEILRAFDVPFDQSEVVSGDNNNVDHIQNVEPMDLGNFQMKVKEMTLVD
WVTDHIDIVREAQLHSKPIQLSVLETLSRLKDNFGIRQIVHNNKFTYSSI
NSLLNVLEDTLHSKEEKSFHLRNRSIVFSNYTGLDHMGRFSVDFFSPPEV
WKEALENLGKSSEILDQIEEEKHKISTSYFGIRFVNPRSSNPIPIIPYYK
SLLRISHQLEKDQFMGDKSFKNLLALFDWDDSFVGVSKEGFLKIPPLTSK
IILFDYISKYQDTIVETRKSYLRNMRFEHKIMNEAKTALQLDSVLKDHVL
DTNETIQACQKIINQSNLLDLSGCNVMISRYYDISPDGFVRIPWNFLQ
Run BLAST on NCBI

transcript from alignment at sc0000187:159690..163437+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014365 ID=TCONS_00014365|Name=TCONS_00014365|organism=Clytia hemisphaerica|type=transcript|length=3748bp|location=Sequence derived from alignment at sc0000187:159690..163437+ (Clytia hemisphaerica)
tttgggggccgtctctgttttgggggccatatactgtagctTTTGTGTAC TTTTTATAGGgaaaaaaatgataataagaaaataaaaatcagcaaaataa tTTATGGTGAGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAG GCAGATGAGCTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTAC ATCCAGATTTCTTCAATGAATATCCAAATGAAAAGGTGAAATTAGCAATG ATTGTTGTGTTCatacttaaagggacataaaactactgacgaaatttgta aacaaaccgtatgcagcggaatataaaatcaaaacaaatgccACAATGAG GCctcccagcggcacccctaatcacgccatcacgcaaaaaaattttctcc atcacgcatcacgaaaatcgctaaaatttgtNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaata gcgaaaaatagcccaaatcacgcatcacgcctcaaatttttgccctatca cgcatcacgccaaaaccttgatcacgccatcacgccgaaaaaaatctcta atcacgccatcacgcaagaaaaaagtcccaatcacgccatcacgcaaacc gctgggggggcctccacaatatgtcaaaattaaaaatcaaaacaaatatg gctgattttataattgtttcaattgttttacaagtttgttttggacacgt gattttaatttttctctttaataacacgtggtttgcgcaatacattttac tacttttatgtctctttaagttccaaaaagttttattcttaaaaatattt gcaACATAGATGAAAAGGTAATTGTTGGCTAAATAGAGATTTAGTATGGC AATTTGTACATTAGCAGTTTTCTTGTTTAATAAGCTGCAaagatttcttt tatttttcagataGCATTGGACAATAAGCTAATGCTGGTGAACTTTAAGG ATCTCGTAATCCCCTAGAGATTTTATCAGTCTTTCATTCATTTACCAGAT TTACCAGACAGCAATTTCTGGAGTATGGATCAGACCATACTGTTaacttc tttttgttttttttcagcaaATAAATGAGCAATCCCTGAAATTGCTGCAC TCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGATACATCCTT GACTTTCTACAAGAAACACAAGGAATCAGGTATGATTTTGAAGCCTTTTG GAATCATATACGTTGGTTTTAGAAATGAAGTggtgaagagaaaaaaaagg agGATTGCTGAGGTGCATTCGGCCCGCCTAGCTAGGGTTCATAAAATGGC AGCATATATAAACAGTTATGAACCCTAAtcccaaacaaaacaaaagaaaa ccatTCTACtcatgaaatgaaattttagatATTTCTTTATTCATAGCAAC TGGACTTTCAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAA TTTATCAAGAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAA GTAGTCTCTGGTGATAACAACAATGTGGATCATATACAAAATGTTGAACC GATGGATCTTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTGG ATTGGGTCACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTCA AAACCTATACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAA TTTTGGTATTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCTA TTAACAGCTTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaa aaaagcttTCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGG TTTAGATCACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAG TCTGGAAagaggtaaaaaaaaaaaattatttttggtgaaATCAGGTGAAA TTGTATCATTTCTATGGTTAAGCCTAGCATTTATACCTCATTGTGCCATC TTTTCCAGTAGCTAGGGGTTGAAGCCCTCCTTTAATGCTGGAACGCCAGG TTGTAACAAAAGTCTAAGAATTTTCCCTTTAACTTATTCTATATACTTTT CTTTTCTCCAAGGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGA TCAAATCGAAGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTC GTTTTGTGAATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTAT AAATCCTTACTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGG GGATAAAAGTTTCAAGAATTTGCTCGCTTTGTTTGATTGGTAATATTCTT TTCGTATAGATTTGAATTACATACATCAATATTCGTCCCCTTATAATCAC ACTTTTGCTaattaatttcaaacttttgttGTAAGATTGTGTTGTAATAT CAACAAAACGTCGTCACATTTATGGATCGGTTATCTAAATTTAGTTTACT TGAAACAAACAAGTGATGGAATTTTGTAGTTACATTGTTGAAGTTAATTT cacatttatttacttttaggGATGATTCCTTTGTTGGAGTTTCGAAGGAA GGCTTTCTGAAAATTCCACCTTTAACcagtaaaataattttatttgattA CATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAAGAGTTACCTCC GGTAATTATTATATAACGAATAATGCTTGAAACGCAAAGAAAATgagaaa ctaattttcgtggtCGAAAAAAATCTCGAAAGGATCACATTTCAGGGCaa ttaattttctttgtttcgcCCTATTTCGGACATAAATGATTCTTTCAtga tttaatgaaaaatgacaaaatttgtaaTTCGTGGGTTCTAATTTTTGGGG TTATACCGAAAATTAGTTtctgtgaaaattagttccctaaaGCATTTATC TATTATCATCTCTCATGATTTTAAGTCCACAATTTGACAAGAAGAGTTGG TATtgaataccttattacacaaaatTAGCTAGTCATGTTATTAAAGCAAT TATTGACCCAGGGCGTGTTGATTATAAACCATCTAACAAAATTTGAGTCT TTTTCCGTCGATGAATTATCGCACTCTCTTTACCAAAGTTAAATACCTGA GTAGTTGTATAAGAGAGTAATAAGGTATTATTATAATGaaactttgtttt ctttttagaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAAAAAC AGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACAAATG AAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTTAGAT TTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTCCTGA TGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGACCCCTTATTTTAC AGTACATACTTGTgtaaagattttccaaatatttaatACCCTCCCTTN

Coding sequence (CDS) from alignment at sc0000187:159690..163437+

>TCONS_00014365 ID=TCONS_00014365|Name=TCONS_00014365|organism=Clytia hemisphaerica|type=CDS|length=8082bp|location=Sequence derived from alignment at sc0000187:159690..163437+ (Clytia hemisphaerica)
ATGGTGAGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAGGCA
GATGAGCTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTACATC
CAGATTTCTTCAATGAATATCCAAATGAAAAGcaaATAAATGAGCAATCC
CTGAAATTGCTGCACTCACATGTGGACACCATCAAAAGCGGTGGCTCAAC
TGCAGATACATCCTTGACTTTCTACAAGAAACACAAGGAATCAGCAACTG
GACTTTCAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAATT
TATCAAGAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAAGT
AGTCTCTGGTGATAACAACAATGTGGATCATATACAAAATGTTGAACCGA
TGGATCTTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTGGAT
TGGGTCACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTCAAA
ACCTATACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAATT
TTGGTATTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCTATT
AACAGCTTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaaaa
aagcttTCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGGTT
TAGATCACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTC
TGGAAagagGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGATCA
AATCGAAGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTCGTT
TTGTGAATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTATAAA
TCCTTACTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGGGGA
TAAAAGTTTCAAGAATTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTG
TTGGAGTTTCGAAGGAAGGCTTTCTGAAAATTCCACCTTTAACcagtaaa
ataattttatttgattACATCTCAAAATACCAGGACACAATAGTTGAAAC
AAGAAAGAGTTACCTCCGaaatatgaGGTTTGAACATAAGATAATGAATG
AAGCAAAAACAGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTG
GATACAAATGAAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAA
CTTGTTAGATTTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATA
TTTCTCCTGATGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGAATG
GTGAGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAGGCAGAT
GAGCTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTACATCCAG
ATTTCTTCAATGAATATCCAAATGAAAAGcaaATAAATGAGCAATCCCTG
AAATTGCTGCACTCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGC
AGATACATCCTTGACTTTCTACAAGAAACACAAGGAATCAGCAACTGGAC
TTTCAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAATTTAT
CAAGAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAAGTAGT
CTCTGGTGATAACAACAATGTGGATCATATACAAAATGTTGAACCGATGG
ATCTTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTGGATTGG
GTCACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTCAAAACC
TATACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAATTTTG
GTATTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCTATTAAC
AGCTTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaaaaaag
cttTCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGGTTTAG
ATCACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTCTGG
AAagagGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGATCAAAT
CGAAGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTCGTTTTG
TGAATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTATAAATCC
TTACTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGGGGATAA
AAGTTTCAAGAATTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTGTTG
GAGTTTCGAAGGAAGGCTTTCTGAAAATTCCACCTTTAACcagtaaaata
attttatttgattACATCTCAAAATACCAGGACACAATAGTTGAAACAAG
AAAGAGTTACCTCCGaaatatgaGGTTTGAACATAAGATAATGAATGAAG
CAAAAACAGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGAT
ACAAATGAAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTT
GTTAGATTTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTT
CTCCTGATGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGAATGGTG
AGGAATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAGGCAGATGAG
CTCTTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTACATCCAGATT
TCTTCAATGAATATCCAAATGAAAAGcaaATAAATGAGCAATCCCTGAAA
TTGCTGCACTCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGA
TACATCCTTGACTTTCTACAAGAAACACAAGGAATCAGCAACTGGACTTT
CAGCTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAATTTATCAA
GAAATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAAGTAGTCTC
TGGTGATAACAACAATGTGGATCATATACAAAATGTTGAACCGATGGATC
TTGGTAATTTTcagatgaaagtgaaggagatgACGCTGGTGGATTGGGTC
ACTGACCATATTGATATTGTAAGAGAGGCACAATTGCACTCAAAACCTAT
ACAATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAATTTTGGTA
TTCGCCAAATTGTTCATAACAATAAATTCACATACAGCTCTATTAACAGC
TTGCTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaaaaaagctt
TCACTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGGTTTAGATC
ACATGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTCTGGAAa
gagGCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGATCAAATCGA
AGAAGAAAAGCacaaaatttcaacatcatATTTTGGTATTCGTTTTGTGA
ATCCAAGATCTTCAAACCCAATTCCAATCATACCCTACTATAAATCCTTA
CTTAGGATATCTCACCAACTTGAGAAAGATCAATTTATGGGGGATAAAAG
TTTCAAGAATTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTGTTGGAG
TTTCGAAGGAAGGCTTTCTGAAAATTCCACCTTTAACcagtaaaataatt
ttatttgattACATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAA
GAGTTACCTCCGaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAA
AAACAGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACA
AATGAAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTT
AGATTTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTC
CTGATGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGAATGGTGAGG
AATTTGTTGGCAAAATGTTTACTGAACAGACAAGTAAGGCAGATGAGCTC
TTTAAAGAAAGGCATGAAGGAATTTTATCTTGCGGTACATCCAGATTTCT
TCAATGAATATCCAAATGAAAAGcaaATAAATGAGCAATCCCTGAAATTG
CTGCACTCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGATAC
ATCCTTGACTTTCTACAAGAAACACAAGGAATCAGCAACTGGACTTTCAG
CTATCCGTCTAAAACTAAAGACCAACTCAACAACATCAATTTATCAAGAA
ATCTTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAAGTAGTCTCTGG
TGATAACAACAATGTGGATCATATACAAAATGTTGAACCGATGGATCTTG
GTAATTTTcagatgaaagtgaaggagatgACGCTGGTGGATTGGGTCACT
GACCATATTGATATTGTAAGAGAGGCACAATTGCACTCAAAACCTATACA
ATTAAGTGTTCTAGAGACATTATCCAGATTGAAAGATAATTTTGGTATTC
GCCAAATTGTTCATAACAATAAATTCACATACAGCTCTATTAACAGCTTG
CTCAATGTTTTGGAAGATACTTTAcattcaaaagaagaaaaaagcttTCA
CTTGAGGAATCGTAGTATCGTTTTCAGCAACTACACTGGTTTAGATCACA
TGGGCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTCTGGAAagag
GCTCTGGAGAATCTGGGGAAATCTTCTGAAATACTGGATCAAATCGAAGA
AGAAAAGCacaaaatttcaacatcatATTTTGGTATTCGTTTTGTGAATC
CAAGATCTTCAAACCCAATTCCAATCATACCCTACTATAAATCCTTACTT
AGGATATCTCACCAACTTGAGAAAGATCAATTTATGGGGGATAAAAGTTT
CAAGAATTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTGTTGGAGTTT
CGAAGGAAGGCTTTCTGAAAATTCCACCTTTAACcagtaaaataatttta
tttgattACATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAAGAG
TTACCTCCGaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAAAAA
CAGCTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACAAAT
GAAACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTTAGA
TTTATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTCCTG
ATGGTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGAATGGTGAGGAAT
TTGTTGGCAAAATGTTTACTGAACAGACAAGTAAGGCAGATGAGCTCTTT
AAAGAAAGGCATGAAGGAATTTTATCTTGCGGTACATCCAGATTTCTTCA
ATGAATATCCAAATGAAAAGcaaATAAATGAGCAATCCCTGAAATTGCTG
CACTCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGATACATC
CTTGACTTTCTACAAGAAACACAAGGAATCAGCAACTGGACTTTCAGCTA
TCCGTCTAAAACTAAAGACCAACTCAACAACATCAATTTATCAAGAAATC
TTGAGAGCATTTGATGTTCCATTTGATCAAAGTGAAGTAGTCTCTGGTGA
TAACAACAATGTGGATCATATACAAAATGTTGAACCGATGGATCTTGGTA
ATTTTcagatgaaagtgaaggagatgACGCTGGTGGATTGGGTCACTGAC
CATATTGATATTGTAAGAGAGGCACAATTGCACTCAAAACCTATACAATT
AAGTGTTCTAGAGACATTATCCAGATTGAAAGATAATTTTGGTATTCGCC
AAATTGTTCATAACAATAAATTCACATACAGCTCTATTAACAGCTTGCTC
AATGTTTTGGAAGATACTTTAcattcaaaagaagaaaaaagcttTCACTT
GAGGAATCGTAGTATCGTTTTCAGCAACTACACTGGTTTAGATCACATGG
GCAGGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTCTGGAAagagGCT
CTGGAGAATCTGGGGAAATCTTCTGAAATACTGGATCAAATCGAAGAAGA
AAAGCacaaaatttcaacatcatATTTTGGTATTCGTTTTGTGAATCCAA
GATCTTCAAACCCAATTCCAATCATACCCTACTATAAATCCTTACTTAGG
ATATCTCACCAACTTGAGAAAGATCAATTTATGGGGGATAAAAGTTTCAA
GAATTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTGTTGGAGTTTCGA
AGGAAGGCTTTCTGAAAATTCCACCTTTAACcagtaaaataattttattt
gattACATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAAGAGTTA
CCTCCGaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAAAAACAG
CTCTTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACAAATGAA
ACAATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTTAGATTT
ATCAGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTCCTGATG
GTTTTGTTAGAATCCCCTGGAATTTTCTTCAGTGAATGGTGAGGAATTTG
TTGGCAAAATGTTTACTGAACAGACAAGTAAGGCAGATGAGCTCTTTAAA
GAAAGGCATGAAGGAATTTTATCTTGCGGTACATCCAGATTTCTTCAATG
AATATCCAAATGAAAAGcaaATAAATGAGCAATCCCTGAAATTGCTGCAC
TCACATGTGGACACCATCAAAAGCGGTGGCTCAACTGCAGATACATCCTT
GACTTTCTACAAGAAACACAAGGAATCAGCAACTGGACTTTCAGCTATCC
GTCTAAAACTAAAGACCAACTCAACAACATCAATTTATCAAGAAATCTTG
AGAGCATTTGATGTTCCATTTGATCAAAGTGAAGTAGTCTCTGGTGATAA
CAACAATGTGGATCATATACAAAATGTTGAACCGATGGATCTTGGTAATT
TTcagatgaaagtgaaggagatgACGCTGGTGGATTGGGTCACTGACCAT
ATTGATATTGTAAGAGAGGCACAATTGCACTCAAAACCTATACAATTAAG
TGTTCTAGAGACATTATCCAGATTGAAAGATAATTTTGGTATTCGCCAAA
TTGTTCATAACAATAAATTCACATACAGCTCTATTAACAGCTTGCTCAAT
GTTTTGGAAGATACTTTAcattcaaaagaagaaaaaagcttTCACTTGAG
GAATCGTAGTATCGTTTTCAGCAACTACACTGGTTTAGATCACATGGGCA
GGTTTTCTGTTGATTTTTTCAGTCCTCCTGAAGTCTGGAAagagGCTCTG
GAGAATCTGGGGAAATCTTCTGAAATACTGGATCAAATCGAAGAAGAAAA
GCacaaaatttcaacatcatATTTTGGTATTCGTTTTGTGAATCCAAGAT
CTTCAAACCCAATTCCAATCATACCCTACTATAAATCCTTACTTAGGATA
TCTCACCAACTTGAGAAAGATCAATTTATGGGGGATAAAAGTTTCAAGAA
TTTGCTCGCTTTGTTTGATTGgGATGATTCCTTTGTTGGAGTTTCGAAGG
AAGGCTTTCTGAAAATTCCACCTTTAACcagtaaaataattttatttgat
tACATCTCAAAATACCAGGACACAATAGTTGAAACAAGAAAGAGTTACCT
CCGaaatatgaGGTTTGAACATAAGATAATGAATGAAGCAAAAACAGCTC
TTCAATTGGATTCAGTTCTCAAAGACCATGTGTTGGATACAAATGAAACA
ATACAAGCTTGCCAAAAGATTATTAATCAATCAAACTTGTTAGATTTATC
AGGTTGCAATGTCATGATCAGTAGATACTATGATATTTCTCCTGATGGTT
TTGTTAGAATCCCCTGGAATTTTCTTCAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008044XLOC_008044Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Conserved uncharacterized C3orf23 proteinTCONS_00014365-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014365-exon-sc0000187-1491911889:159690..159924TCONS_00014365-exon-sc0000187-1491911889:159690..159924Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:159690..159924TCONS_00014365-exon-sc0000187-1510915933:159690..159924Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:159690..159924TCONS_00014365-exon-sc0000187-1575043694:159690..159924Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1491911889:161007..161118TCONS_00014365-exon-sc0000187-1491911889:161007..161118Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:161007..161118TCONS_00014365-exon-sc0000187-1510915933:161007..161118Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:161007..161118TCONS_00014365-exon-sc0000187-1575043694:161007..161118Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1491911889:161336..161850TCONS_00014365-exon-sc0000187-1491911889:161336..161850Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:161336..161850TCONS_00014365-exon-sc0000187-1510915933:161336..161850Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:161336..161850TCONS_00014365-exon-sc0000187-1575043694:161336..161850Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1491911889:162052..162278TCONS_00014365-exon-sc0000187-1491911889:162052..162278Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:162052..162278TCONS_00014365-exon-sc0000187-1510915933:162052..162278Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:162052..162278TCONS_00014365-exon-sc0000187-1575043694:162052..162278Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1491911889:162509..162640TCONS_00014365-exon-sc0000187-1491911889:162509..162640Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:162509..162640TCONS_00014365-exon-sc0000187-1510915933:162509..162640Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:162509..162640TCONS_00014365-exon-sc0000187-1575043694:162509..162640Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1491911889:163148..163437TCONS_00014365-exon-sc0000187-1491911889:163148..163437Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1510915933:163148..163437TCONS_00014365-exon-sc0000187-1510915933:163148..163437Clytia hemisphaericaexon
TCONS_00014365-exon-sc0000187-1575043694:163148..163437TCONS_00014365-exon-sc0000187-1575043694:163148..163437Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:159690..163437 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.5298 47.9088 32.9503 34.3492 35.1295 25.8724 27.0794 28.4677 15.4534 17.6909 13.2511 12.2479 11.9425 8.54433 13.5231 12.8353 22.4192 19.3099 11.9629 13.9126 20.4441 22.2826 33.6485 32.5796 15.5348 19.9219 25.0708 18.3426 28.4595 31.7998
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027989DUF4461
IPR028031DUF4460
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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