TCONS_00014342 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014342
Unique NameTCONS_00014342
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014342 ID=TCONS_00014342|Name=TCONS_00014342|organism=Clytia hemisphaerica|type=transcript|length=233bp
CTATTGAATCACTAACCTattgaaactatttttgatgTTATGTAATATTT
AAAGGTATTTGTATATATATGGAAGaatcagaaaaaaggaaaacagaaAA
GTGCAGAGGTTGAGggaaaaactttttggagaaaaacaacATAAAGTTCA
AGTTGTTGAGAGTGCTGCTGCTGACCTAAATACTTCACaaaatttgaata
atatttttgaacaGTCCGACTTTGGGAGCACAT
Run BLAST on NCBI

transcript from alignment at sc0000185:94719..94951

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014342 ID=TCONS_00014342|Name=TCONS_00014342|organism=Clytia hemisphaerica|type=transcript|length=233bp|location=Sequence derived from alignment at sc0000185:94719..94951 (Clytia hemisphaerica)
ATGTGCTCCCAAAGTCGGACtgttcaaaaatattattcaaattttGTGAA
GTATTTAGGTCAGCAGCAGCACTCTCAACAACTTGAACTTTATgttgttt
ttctccaaaaagtttttccCTCAACCTCTGCACTTttctgttttcctttt
ttctgattCTTCCATATATATACAAATACCTTTAAATATTACATAAcatc
aaaaatagtttcaatAGGTTAGTGATTCAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008022XLOC_008022Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014342-exon-sc0000185-1491911889:94719..94951TCONS_00014342-exon-sc0000185-1491911889:94719..94951Clytia hemisphaericaexon
TCONS_00014342-exon-sc0000185-1510915933:94719..94951TCONS_00014342-exon-sc0000185-1510915933:94719..94951Clytia hemisphaericaexon
TCONS_00014342-exon-sc0000185-1575043694:94719..94951TCONS_00014342-exon-sc0000185-1575043694:94719..94951Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:94719..94951 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	3.48887	0.501066	0	1.9337	4.22958	9.38811	7.36104	8.79427	4.47083	3.10413	3.81283	7.82592	6.14712	4.2907	0	0	13.4257	3.44727	0.447827	0	3.12564	0.998266	6.36464	5.63039	7.32432	0	0	4.09218
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014342 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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