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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014185 ID=TCONS_00014185|Name=TCONS_00014185|organism=Clytia hemisphaerica|type=transcript|length=2231bp
CTCAAATTAAGCCTAAATTACGCGCAGCAGTAATTAATCCCTATCATTAA
TATTGCAATGCTAATTAACTAATTATCGCCTTAAAGGTTATTATGGTTTG
TTtgtcaaatcaaaataaacccgAGTAATCTAAAACGAAAAGTCTAAAAA
TTGTCCTACGTCGAGGATTAAGTCAGACAATGTCGCACCCAGTCCTTCTA
AGACACTGCTGCGAAACTGTGGCTTGTATTGTTTGGAGTCTGGTGTTGAG
AGTGCGGAAAGCAATTTTGATGCGATTAGAAGAAAGAGTATCAACAGACA
TGCTTGGAAGGATATGAGGAACAACAAGTAGTAAAGATGATGAAACCAAC
CGTATAATTTTATAAGACCAATACCAATATCCGACTCCAAGATGatggga
aaaatgaaattcgCTGAGCTGGCACGAAAAGCGAACGCCAGACCAATACA
AGAAGAACAGGAGACAGCAGAAATTGATCAAGAAGAAAAGATCGAAGAAA
AACCACGTACTGAAACCTTTGCAGATCTTCCTCCTTTAGATGAGAACAAG
TATGTTCTGGATGAAGCTTATTTCATACCGATATCCACCATCAAAGAAAA
GGCTATAAAACCGAAAAAACCGGTCGCCCGAAAAATGTCTGGATTCACAC
GGATGGGATCATATAAGAGCGCGCCGTTGAAAACAACCGACGAGTCTATT
CCTTTAATGGATAGTTGTAGCAGTGATACCAAAAGTACAGGGGTTTCCAG
TGAAGGCAGTAACGAAGCTGTCGAGGAGAAGGAGGGGAAATCCCCAGCGA
AATCAGGGAATATTTTTGCCAGGAGAAAGATAACTGAAGCAGCTGATCCG
ACACAATTAAAGGAAAACCCTTTCCATCGCCGTGGCGTTGTTATCGATCC
ATTTCAACAAAATAATATTCGATCAAAATTAAAGACCAGATTAAGAAAGA
TCGTGGACGAAAGATTGACTGTGAAACAGATTTTCTCGAGATATGTTGAA
AGTTCAACTCTTCACGGATTCTTGTATACTTGTTCAGATACTTATATCAT
AAGGAGATTCTTATGGGCGTGCTTAATGATCTTAGGTGCAATATACTTTT
TGGTCAAACTAAGAGAAGGTATCATAGAGTACTTCGAATATCCGTTCAGC
ACATTGTCGATCATTGACTTTCCAGATATATTGGAGTTCCCAACAATCAG
TTTCTGTTTAGTCAACGGATACAAACATAAAGAACTCAATGAGAGTAGAT
TAGGACCTTTATTACAAAATGGTAGATTTCCTATCCATTCAAGTTGGTTG
GACCCTGGGTACGACATCCCCGGTGATGAACTGGTTGAGGTGATGAATAA
TATCTCATTCACACCTTCAGATGTTTTCGAGGAATGTGATTGGATAAAAC
GAGACACAGCTCACCCATCGGTGCCACCCAATAAATGCGACGCTGCAAAT
TTCACCACATTCTTCAATAAACAAAACGAGAAATGTTTCATGTTGAATTC
AAACCAAAAAGGTCACCCTTTATTAAAAGTCAATCACGAAGGTTTAAAAT
ACGGCTACGAAGGACTTTTTGATATGAGGACTTCGAGCGCCTTTTTGACA
CACCCCTTTGCTGGATTGAGGGTGTATATTCATTCTCACCACGAACCTGC
AGGCTCAGGATCAAGCTTCTTGTTGTCGCCTGGTTTCCATTACTACGTCA
AGATGGACATGCACGAGACACACAATCTTGAACCTCCGTACAGTACACAG
TGTGGTGAAATccaattaaaatatttcgatACATACAATCAGAAAGCATG
TTTATTAGAAAAGTTGACGGATTATGTTGGTGAAAAATGCGGATGTAGAG
AACCATTCATGGCAGAAAACGGTTTGCCGAGCTGTTCACTAAAACAAACT
ATTTTATGTAGTTTGTCTGCTAAAGACTCTTTCAGTGAGTACAAATTTCG
TGAGGGTTGTCCAGTAGACTGCGTACAACATTATTATCGATATCAGATCA
CTGATTCGCGCTTTCTACATAACCCACCAACAGGAGTTGAAGCTCAAGTG
TTGCGAAATGAAAATGCAAGGAAGGGACAAAATTCATCACATATGTTGGA
ACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGCTCATTATGTTGAGTAAG
TTCGACCACGAGATGTAAATTCTATGGGAACCCTTTTCCTAAGACTTTGA
TGGCCTTTGATGGCTTTTCAGACTCTTAAAA Run BLAST on NCBI protein sequence of TCONS_00014185-protein >TCONS_00014185-protein ID=TCONS_00014185-protein|Name=TCONS_00014185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MMGKMKFAELARKANARPIQEEQETAEIDQEEKIEEKPRTETFADLPPLD
ENKYVLDEAYFIPISTIKEKAIKPKKPVARKMSGFTRMGSYKSAPLKTTD
ESIPLMDSCSSDTKSTGVSSEGSNEAVEEKEGKSPAKSGNIFARRKITEA
ADPTQLKENPFHRRGVVIDPFQQNNIRSKLKTRLRKIVDERLTVKQIFSR
YVESSTLHGFLYTCSDTYIIRRFLWACLMILGAIYFLVKLREGIIEYFEY
PFSTLSIIDFPDILEFPTISFCLVNGYKHKELNESRLGPLLQNGRFPIHS
SWLDPGYDIPGDELVEVMNNISFTPSDVFEECDWIKRDTAHPSVPPNKCD
AANFTTFFNKQNEKCFMLNSNQKGHPLLKVNHEGLKYGYEGLFDMRTSSA
FLTHPFAGLRVYIHSHHEPAGSGSSFLLSPGFHYYVKMDMHETHNLEPPY
STQCGEIQLKYFDTYNQKACLLEKLTDYVGEKCGCREPFMAENGLPSCSL
KQTILCSLSAKDSFSEYKFREGCPVDCVQHYYRYQITDSRFLHNPPTGVE
AQVLRNENARKGQNSSHMLELVEELSPEELAHYVE Run BLAST on NCBI transcript from alignment at sc0000183:59938..67225+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014185 ID=TCONS_00014185|Name=TCONS_00014185|organism=Clytia hemisphaerica|type=transcript|length=7288bp|location=Sequence derived from alignment at sc0000183:59938..67225+ (Clytia hemisphaerica)
CTCAAATTAAGCCTAAATTACGCGCAGCAGTAATTAATCCCTATCATTAA
TATTGCAATGCTAATTAACTAATTATCGCCTTAAAGGTTATTATGGTTTG
TTtgtcaaatcaaaataaacccgAGTAATCTAAAACGAAAAGTCTAAAAA
TTGTCCTACGTCGAGGATTAAGTCAGACAATGTCGCACCCAGTCCTTCTA
AGACACTGCTGCGAAACTGTGGCTTGTATTGTTTGGAGTCTGGTGTTGAG
AGTGCGGAAAGCAATTTTGATGCGATTAGAAGAAAGAGTATCAACAGACA
TGCTTGGAAGGATATGAGGAACAACAAGTAGTAAAGATGATGAAACCAAC
CGTATAATTTTATAAGGTAagatttttgtatgttttttatGTTTCGAACC
TGTTTACTCTATAAAAACCTTATATACACCACAGTATACTCTACCTTTTA
AATTTGAAGAAGTCCATAGGATTCTTAAAATTTCTTTCCCCTAGATTTTG
CTGCCAATTTACTGACTCGAACAATTTTGGAGTTTTCCAGCTGGTATATA
AAATACACGAAATATGATTTCTATATTACCGGACTAGGATGTATCTGTTA
TGAAAGGAATATTGACCAGAGTTAACaaacttacacgttttttttataag
aacatccaaaatttttgaagccttcggatgttcttaactcttttagtttt
aagcctaaaaatgttcttaacatatccttattttcaccattttttgagaa
tttttctccattttcttGTACattgggtattttagagtcctcaaagcctt
gtgttctttaaaagaaaaaacgtgtactgttatattagctctagtttaga
cggccgactttctgccctgcctattctaattgttagagtaggcagaaaga
gggcacaaagttggttgttaaaatctttgcttgacaAGGTTTgattgaag
acattgcattgacgtcaaaagagggctatgcatcactttagacagccaac
tttatgccctctttaattcacaattagaataggcagggcaaaaagtgggc
cgtctaaactagagctaataGTTCACTATTTTGACAAAaacagtctgtaa
aatactgtACAGTTCAGCTAGCTGAACTGAGATTTCACAAGTTTGCGTAT
AGACTGGTTagtaaattttccaaaaaaccaaaccTTTCAGTTTCTTTTAT
CATTTGAGTGAATAGGGTGACTTTCAGCTAAATTCTCTTAGCTCTTAGCT
CAACGGAATTCCTTATTTTCGCCTTAGACTCCTTAGTTTAAAATTCTGAT
ACAACTATAAATGGTTTATAAAATGCTTCGCCTAGTAGGATAACGATAAA
CTTCAAAAAAGTGACCTGGTGCTTACTCATAGGAAACAGGCTATACTATA
TCAGTCGTACTGAGCTTAAATAAGAAAAAGTACTTTACTTAATCGGCTTT
CTTGGTGAAAGTCTGTTTAACGTCCCCTTCTTAATCCAAATAGATGGTTA
TATACATATTAAATGTTCCCCTCTGTTTGCAGTAGGGTGATTTCGTATCG
ACCTTTATCCGGAAAGTTTTACTCAAACACAGAATAGGATTGTCAGTTTT
TATATCTTTAAAGCTGATGACTTTTTATAGGTTTAATTAAACTTCAAGCT
TTGAATACAAGCTTGAATAAGAATGTCTGTTTAGTGCTTGTTTGAGTCAC
TTATAGTATTTCcaatatgtcaaataaaaattctttttgtgaCAAATCGG
ATGAAAGAATGGTTCTAAGTTTCCATTCAGAGAAAGGGCTTTGATGACTT
ATACAAGAGAAGGATGATATTTATAGTTTTACTGTCGGACCTCCTTGGTT
TTGATGGAATTTACACTAAACAGCAAGAGGGTTTTGGGCAATTTTTCACC
CTCTATTGGAATGCtaattatgttttttgcttttttgaatcctttgaaat
tcttttgacTATATGAATATCCGACTATATTATTGCCAAGAATATTAAAA
AAGGCAAAGTCAAATAAACTTTTAATAATTTCGGTCTCTTAAATATTTAC
CGTAGACCAATACCAATATCCGACTCCAAGATGatgggaaaaatgaaatt
cgCTGAGCTGGCACGAAAAGCGAACGCCAGACCAATACAAGAAGAACAGG
AGACAGCAGAAATTGATCAAGAAGAAAAGATCGAAGAAAAACCACGTACT
GAAACCTTTGCAGATCTTCCTCCTTTAGATGAGAACAAGTATGTTCTGGA
TGAAGCTTATTTCATACCGATATCCACCATCAAAGAAAAGGCTATAAAAC
CGAAAAAACCGGTCGCCCGAAAAATGTCTGGATTCACACGGATGGGATCA
TATAAGAGCGCGCCGTTGAAAACAACCGACGAGTCTATTCCTTTAATGGA
TAGTTGTAGCAGTGATACCAAAAGTACAGGGGTTTCCAGTGAAGGCAGTA
ACGAAGCTGTCGAGGAGAAGGAGGGGAAATCCCCAGCGAAATCAGGGAAT
ATTTTTGCCAGGAGAAAGATAACTGAAGCAGCTGATCCGACACAATTAAA
GGAAAACCCTTTCCATCGCCGTGGCGTTGTTATCGATCCATTTCAACAAA
ATAATATTCGATCAAAATTAAAGACCAGATTAAGAAAGATCGTGGACGAA
AGATTGACTGTGAAACAGATTTTCTCGAGATATGTTGAAAGTTCAACTCT
TCACGGATTCTTGTATACTTGTTCAGATACTTATATCATAAGGAGATTCT
TATGGGCGTGCTTAATGATCTTAGGTGCAATATACTTTTTGGTCAAACTA
AGAGAAGGTATCATAGAGTACTTCGAATATCCGTTCAGCACATTGTCGAT
CATTGACTTTCCAGATATATTGGAGTTCCCAACAATCAGTTTCTGTTTAG
TCAACGGATACAAACATAAAGAACTCAATGAGAGTAGATTAGGACCTTTA
TTACAAAATGGTAGATTTCCTATCCATTCAAGTTGGTTGGACCCTGGGTA
CGACATCCCCGGTGATGAACTGGTTGAGGTGATGAATAATATCTCATTCA
CACCTTCAGATGTTTTCGAGGAATGTGATTGGATAAAACGAGACACAGCT
CACCCATCGGTGCCACCCAATAAATGCGACGCTGCAAATTTCACCACATT
CTTCAATAAACAAAACGAGAAATGTTTCATGTTGAATTCAAACCAAAAAG
GTCACCCTTTATTAAAAGTCAATCACGAAGGTTTAAAATACGGCTACGAA
GGACTTTTTGATATGAGGACTTCGAGCGCCTTTTTGACACACCCCTTTGC
TGGATTGAGGGTGTATATTCATTCTCACCACGAACCTGCAGGCTCAGGAT
CAAGCTTCTTGTTGTCGCCTGGTTTCCATTACTACGTCAAGATGGACATG
CACGAGGTAAGAATAACGAGTTTATTTCACGCATGCATAATGGAAAAGAA
TAAGACAAGGGGACGATAATTTAAAAATTACTTTCCACTTTACAAACTTT
TTGAGAACTCCCACCCTgttttctttacttaaaaacgACTTaaaatggat
ttttaacgtATTGTACTTATTGGCCCTCTAACCTTCTCGAGTATAACTCC
AAGTAAAGAAGAACAGTCTTTTTCAGTAGTGATAAACCTCTGTATCAGTG
GCCCAGCATGAATCTCGAGTCATTCTAAACCAATGGTTTCCCAATGTGGA
TAAGATTTCATAGTCTTTTTCCAATACggttgttttaatttttcaaaaag
gatgATCTTTTGTCCGAAAAATGCCAGAAGAAGAAACAGATTTttcgaaa
ctttcaaatatattCATACATCTCTATTTCCTGATTAAGGTCAATATTAA
ACAGGATAAAATCTCCCTAAAGATTTCGAGCTAAGCCTCTAATAAGTTGA
TCGGAAAAGTCAATAATGGAATGTCTAAGTCACACAATGTCTATAAAGAG
ATTAGACGAAAGTAAAAAGCTTCTATTCGTCAGTACTcattaagaaaatt
tgaaacgtTCGGTATAGTACCTACCAATAGAAAAAATTTACATGGGCCAA
ATTTTCATAATACTCAATTCAAGTCATTTCAGTGAAAATCCATCGATGGA
AAATCCCAACGAAATAGTCCACGTCCTGCTTATTGTAAAAATCAGCTCGG
AAAACCATGTTTCgaatacagtcaactctcttaTTCGAACCTCCCTTATT
GGAATCTTTCTGTGATCCAAATTAAAAAGTCAGTTTCTTTCAATTGGAAA
GAAGTGGTCTAAATTCCTTTCTGtagttcgaatctttctgtcCGTCTTCC
TTGAAAATCTAATTTGAGAGAGATTCAACAACTGCAGTCACTTGTTTTCT
TCACTTTTAGACACACAATCTTGAACCTCCGTACAGTACACAGTGTGGTG
AAATccaattaaaatatttcgatACATACAATCAGAAAGCATGTTTATTA
GAAAAGTTGACGGATTATGTTGGTGAAAAATGCGGATGTAGAGAACCATT
CATGGCAGGTAAGCGAGGCTTCGATCATCCTTTtctaatgggctattcca
gaaaaaatttgtaccccctTTGTTGAGGtggtcattttttaaaaaggtaa
ccccctggattttttttctcgtttcATAGACTACCCTAAATTTTtgacct
cgttttactgacGACCCTGGTTTTCCCACCTCACTTTACTGACCACCTTG
aatttttacactcgaaaaaccagaccattctgaattttttattttccaga
ccaccctggacgtcacacctcctcaataTAAGGTCATAGACTATTTCTCA
ATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGACCTTAGTGA
AACTTCTGGTTAGTACGATATCCCAATTTCCTCAACGCCAACCTCCTTAA
GACCTTATAagcactacacgtttttttataagaatatccaaaatttagga
tttgtttttgaagccttagggtTCTTAACTTCGGAGTTTAAACCctgaaa
atgttcgtacatagcatgttctcattttcaacactttctgagcatttttg
tccaatttcctACAAAATTTCgcaagctttaaaatgttctaaagtACATC
Ctgatattttgaccatcgaagccttacgttcttatatagttttatcttat
gaaaaaacgtgtatctgcCCACGTATAACTATTGGAGTACTCCGTTGAAG
GATAATTCCTAGTAAATTAAATGAGTTTGATCCTAACTACGTTGACATGA
TTAAATTTCCTATTTCTTTCTAGAAAACGGTTTGCCGAGCTGTTCACTNt
tcgtcgaaaaattaagaacatcgtaagaacatgcccagcctcagtttgga
aaaaaatgacaagaaactacaattttttcctcttttcaagcagttttaac
caaagttagggatggattttctaaaatcgagagtcaaatattgtccaaat
tttatcaACTTTAAGTGCTCTCTATTTTGCATGATGTTGTCGATTTaaag
tagtctgaaaaattaagaacgcatttaagaaaaaaataagcacatccagg
ctcagccaaattttaggtgttctaataaaaaaaaaacgtgtaccctaAAT
TTTtgacctcgttttactgacGACCCTGGTTTTCCCACCTCACTTTACTG
ACCACCTTGaatttttacactcgaaaaaccagaccattctgaatttttta
ttttccagaccaccctggacgtcacacctcctcaataTAAGGTCATAGAC
TATTTCTCAATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGA
CCTTAGTGAAACTTCTGGTTAGTACGATAATATCCCAATTTCCTCAACGC
TAACCTCCTTAAGACCTTATAagcactacacgtttttttataagaatatc
caaaatttaggatttgtttttgaagccttagggtTCTTAACTTCGGAGTT
TAAACCctgaaaatgttcgtacataacatgttttcattttcaacactttc
tgagcatttttgtccaatttcctACAAAATTTCgcaagctttaaaatgtt
ctaaagtACATCCtgatattttgaccatcgaagccttacgttcttatata
gttttatcttatgaaaaaacgtgtatctgcCCACGTAAAACTATTGGAGT
ACTCCGTTGAAGGATAATTCCTAGTAAATTAAATGAGTTTGATCCTAACT
ACGTTGACATGATTAAATTTCCTATTTCTTTCTAGAAAACGGTTTGCCGA
GCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTCTGCTAAAGGTAAA
TATTTTCTAATCTGATTATTATAGTCCATTTAAGAAATTGCGTAATACTG
TAAACTGTCTGAAAGATAGCTAAGATTTTCAATATCTTCAAACAGTTGAC
CTGGGGTTTAAAAATTgtttcagttttttaaatttaaactaTAAAACCGT
TCGTTTTGCAAGTTCAAAAGGGAAAGGAAATCTTACTTAAAACTCCTTGA
GCGGACAATCGAGCTCATTAAATCTTTGAGATGACGTATAGCTCCACTTA
CTAGCTTCTGCGCCATTGAATCATCGTGTTTCTCTATAGAGTcgacgaaa
aataaaaattctaaggttattattttgaaatattattttattctGAAGCA
ATAGGCCAACTAATGCTTAGAGAAAAAAAGTTCATAATAATGCTGACCCT
TAGCCGCTAAAGTCCAAAGTACattattcaaataaaaaatcatgttCTAT
CAAATTTCAGAGTAAGATACAGGACTCGGTGAAATCTGTCCTGTAAAATA
TTATCCTCAATTATGATATGAATTCTCTTCTATTTNTAAGGTCATAGACT
ATTTCTCAATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGAC
CTTAGTGAAACTTCTGGTTAGTACGATATCCCAATTTCCTCAACGCCNTC
AATTATGATATGAATTCTCTTCTATTTACCAGACTCTTTCAGTGAGTACA
AATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTATTATCGATAT
CAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAGGAGTTGAAGC
TCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAATTCATCACATA
TGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGCTCATTATGTT
GAGTAAGTTCGACCACGAGATGTAAATTCTATGGGAACCCTTTTCCTAAG
ACTTTGATGGCCTTTGATGGCTTTTCAGACTCTTAAAA Coding sequence (CDS) from alignment at sc0000183:59938..67225+ >TCONS_00014185 ID=TCONS_00014185|Name=TCONS_00014185|organism=Clytia hemisphaerica|type=CDS|length=7032bp|location=Sequence derived from alignment at sc0000183:59938..67225+ (Clytia hemisphaerica)
ATGatgggaaaaatgaaattcgCTGAGCTGGCACGAAAAGCGAACGCCAG
ACCAATACAAGAAGAACAGGAGACAGCAGAAATTGATCAAGAAGAAAAGA
TCGAAGAAAAACCACGTACTGAAACCTTTGCAGATCTTCCTCCTTTAGAT
GAGAACAAGTATGTTCTGGATGAAGCTTATTTCATACCGATATCCACCAT
CAAAGAAAAGGCTATAAAACCGAAAAAACCGGTCGCCCGAAAAATGTCTG
GATTCACACGGATGGGATCATATAAGAGCGCGCCGTTGAAAACAACCGAC
GAGTCTATTCCTTTAATGGATAGTTGTAGCAGTGATACCAAAAGTACAGG
GGTTTCCAGTGAAGGCAGTAACGAAGCTGTCGAGGAGAAGGAGGGGAAAT
CCCCAGCGAAATCAGGGAATATTTTTGCCAGGAGAAAGATAACTGAAGCA
GCTGATCCGACACAATTAAAGGAAAACCCTTTCCATCGCCGTGGCGTTGT
TATCGATCCATTTCAACAAAATAATATTCGATCAAAATTAAAGACCAGAT
TAAGAAAGATCGTGGACGAAAGATTGACTGTGAAACAGATTTTCTCGAGA
TATGTTGAAAGTTCAACTCTTCACGGATTCTTGTATACTTGTTCAGATAC
TTATATCATAAGGAGATTCTTATGGGCGTGCTTAATGATCTTAGGTGCAA
TATACTTTTTGGTCAAACTAAGAGAAGGTATCATAGAGTACTTCGAATAT
CCGTTCAGCACATTGTCGATCATTGACTTTCCAGATATATTGGAGTTCCC
AACAATCAGTTTCTGTTTAGTCAACGGATACAAACATAAAGAACTCAATG
AGAGTAGATTAGGACCTTTATTACAAAATGGTAGATTTCCTATCCATTCA
AGTTGGTTGGACCCTGGGTACGACATCCCCGGTGATGAACTGGTTGAGGT
GATGAATAATATCTCATTCACACCTTCAGATGTTTTCGAGGAATGTGATT
GGATAAAACGAGACACAGCTCACCCATCGGTGCCACCCAATAAATGCGAC
GCTGCAAATTTCACCACATTCTTCAATAAACAAAACGAGAAATGTTTCAT
GTTGAATTCAAACCAAAAAGGTCACCCTTTATTAAAAGTCAATCACGAAG
GTTTAAAATACGGCTACGAAGGACTTTTTGATATGAGGACTTCGAGCGCC
TTTTTGACACACCCCTTTGCTGGATTGAGGGTGTATATTCATTCTCACCA
CGAACCTGCAGGCTCAGGATCAAGCTTCTTGTTGTCGCCTGGTTTCCATT
ACTACGTCAAGATGGACATGCACGAGACACACAATCTTGAACCTCCGTAC
AGTACACAGTGTGGTGAAATccaattaaaatatttcgatACATACAATCA
GAAAGCATGTTTATTAGAAAAGTTGACGGATTATGTTGGTGAAAAATGCG
GATGTAGAGAACCATTCATGGCAGAAAACGGTTTGCCGAGCTGTTCACTA
AAACAAACTATTTTATGTAGTTTGTCTGCTAAAGACTCTTTCAGTGAGTA
CAAATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTATTATCGAT
ATCAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAGGAGTTGAA
GCTCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAATTCATCACA
TATGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGCTCATTATG
TTGAGTAAATGatgggaaaaatgaaattcgCTGAGCTGGCACGAAAAGCG
AACGCCAGACCAATACAAGAAGAACAGGAGACAGCAGAAATTGATCAAGA
AGAAAAGATCGAAGAAAAACCACGTACTGAAACCTTTGCAGATCTTCCTC
CTTTAGATGAGAACAAGTATGTTCTGGATGAAGCTTATTTCATACCGATA
TCCACCATCAAAGAAAAGGCTATAAAACCGAAAAAACCGGTCGCCCGAAA
AATGTCTGGATTCACACGGATGGGATCATATAAGAGCGCGCCGTTGAAAA
CAACCGACGAGTCTATTCCTTTAATGGATAGTTGTAGCAGTGATACCAAA
AGTACAGGGGTTTCCAGTGAAGGCAGTAACGAAGCTGTCGAGGAGAAGGA
GGGGAAATCCCCAGCGAAATCAGGGAATATTTTTGCCAGGAGAAAGATAA
CTGAAGCAGCTGATCCGACACAATTAAAGGAAAACCCTTTCCATCGCCGT
GGCGTTGTTATCGATCCATTTCAACAAAATAATATTCGATCAAAATTAAA
GACCAGATTAAGAAAGATCGTGGACGAAAGATTGACTGTGAAACAGATTT
TCTCGAGATATGTTGAAAGTTCAACTCTTCACGGATTCTTGTATACTTGT
TCAGATACTTATATCATAAGGAGATTCTTATGGGCGTGCTTAATGATCTT
AGGTGCAATATACTTTTTGGTCAAACTAAGAGAAGGTATCATAGAGTACT
TCGAATATCCGTTCAGCACATTGTCGATCATTGACTTTCCAGATATATTG
GAGTTCCCAACAATCAGTTTCTGTTTAGTCAACGGATACAAACATAAAGA
ACTCAATGAGAGTAGATTAGGACCTTTATTACAAAATGGTAGATTTCCTA
TCCATTCAAGTTGGTTGGACCCTGGGTACGACATCCCCGGTGATGAACTG
GTTGAGGTGATGAATAATATCTCATTCACACCTTCAGATGTTTTCGAGGA
ATGTGATTGGATAAAACGAGACACAGCTCACCCATCGGTGCCACCCAATA
AATGCGACGCTGCAAATTTCACCACATTCTTCAATAAACAAAACGAGAAA
TGTTTCATGTTGAATTCAAACCAAAAAGGTCACCCTTTATTAAAAGTCAA
TCACGAAGGTTTAAAATACGGCTACGAAGGACTTTTTGATATGAGGACTT
CGAGCGCCTTTTTGACACACCCCTTTGCTGGATTGAGGGTGTATATTCAT
TCTCACCACGAACCTGCAGGCTCAGGATCAAGCTTCTTGTTGTCGCCTGG
TTTCCATTACTACGTCAAGATGGACATGCACGAGACACACAATCTTGAAC
CTCCGTACAGTACACAGTGTGGTGAAATccaattaaaatatttcgatACA
TACAATCAGAAAGCATGTTTATTAGAAAAGTTGACGGATTATGTTGGTGA
AAAATGCGGATGTAGAGAACCATTCATGGCAGAAAACGGTTTGCCGAGCT
GTTCACTAAAACAAACTATTTTATGTAGTTTGTCTGCTAAAGACTCTTTC
AGTGAGTACAAATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTA
TTATCGATATCAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAG
GAGTTGAAGCTCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAAT
TCATCACATATGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGC
TCATTATGTTGAGTAAATGatgggaaaaatgaaattcgCTGAGCTGGCAC
GAAAAGCGAACGCCAGACCAATACAAGAAGAACAGGAGACAGCAGAAATT
GATCAAGAAGAAAAGATCGAAGAAAAACCACGTACTGAAACCTTTGCAGA
TCTTCCTCCTTTAGATGAGAACAAGTATGTTCTGGATGAAGCTTATTTCA
TACCGATATCCACCATCAAAGAAAAGGCTATAAAACCGAAAAAACCGGTC
GCCCGAAAAATGTCTGGATTCACACGGATGGGATCATATAAGAGCGCGCC
GTTGAAAACAACCGACGAGTCTATTCCTTTAATGGATAGTTGTAGCAGTG
ATACCAAAAGTACAGGGGTTTCCAGTGAAGGCAGTAACGAAGCTGTCGAG
GAGAAGGAGGGGAAATCCCCAGCGAAATCAGGGAATATTTTTGCCAGGAG
AAAGATAACTGAAGCAGCTGATCCGACACAATTAAAGGAAAACCCTTTCC
ATCGCCGTGGCGTTGTTATCGATCCATTTCAACAAAATAATATTCGATCA
AAATTAAAGACCAGATTAAGAAAGATCGTGGACGAAAGATTGACTGTGAA
ACAGATTTTCTCGAGATATGTTGAAAGTTCAACTCTTCACGGATTCTTGT
ATACTTGTTCAGATACTTATATCATAAGGAGATTCTTATGGGCGTGCTTA
ATGATCTTAGGTGCAATATACTTTTTGGTCAAACTAAGAGAAGGTATCAT
AGAGTACTTCGAATATCCGTTCAGCACATTGTCGATCATTGACTTTCCAG
ATATATTGGAGTTCCCAACAATCAGTTTCTGTTTAGTCAACGGATACAAA
CATAAAGAACTCAATGAGAGTAGATTAGGACCTTTATTACAAAATGGTAG
ATTTCCTATCCATTCAAGTTGGTTGGACCCTGGGTACGACATCCCCGGTG
ATGAACTGGTTGAGGTGATGAATAATATCTCATTCACACCTTCAGATGTT
TTCGAGGAATGTGATTGGATAAAACGAGACACAGCTCACCCATCGGTGCC
ACCCAATAAATGCGACGCTGCAAATTTCACCACATTCTTCAATAAACAAA
ACGAGAAATGTTTCATGTTGAATTCAAACCAAAAAGGTCACCCTTTATTA
AAAGTCAATCACGAAGGTTTAAAATACGGCTACGAAGGACTTTTTGATAT
GAGGACTTCGAGCGCCTTTTTGACACACCCCTTTGCTGGATTGAGGGTGT
ATATTCATTCTCACCACGAACCTGCAGGCTCAGGATCAAGCTTCTTGTTG
TCGCCTGGTTTCCATTACTACGTCAAGATGGACATGCACGAGACACACAA
TCTTGAACCTCCGTACAGTACACAGTGTGGTGAAATccaattaaaatatt
tcgatACATACAATCAGAAAGCATGTTTATTAGAAAAGTTGACGGATTAT
GTTGGTGAAAAATGCGGATGTAGAGAACCATTCATGGCAGAAAACGGTTT
GCCGAGCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTCTGCTAAAG
ACTCTTTCAGTGAGTACAAATTTCGTGAGGGTTGTCCAGTAGACTGCGTA
CAACATTATTATCGATATCAGATCACTGATTCGCGCTTTCTACATAACCC
ACCAACAGGAGTTGAAGCTCAAGTGTTGCGAAATGAAAATGCAAGGAAGG
GACAAAATTCATCACATATGTTGGAACTTGTTGAGGAGCTGTCCCCTGAA
GAATTAGCTCATTATGTTGAGTAAATGatgggaaaaatgaaattcgCTGA
GCTGGCACGAAAAGCGAACGCCAGACCAATACAAGAAGAACAGGAGACAG
CAGAAATTGATCAAGAAGAAAAGATCGAAGAAAAACCACGTACTGAAACC
TTTGCAGATCTTCCTCCTTTAGATGAGAACAAGTATGTTCTGGATGAAGC
TTATTTCATACCGATATCCACCATCAAAGAAAAGGCTATAAAACCGAAAA
AACCGGTCGCCCGAAAAATGTCTGGATTCACACGGATGGGATCATATAAG
AGCGCGCCGTTGAAAACAACCGACGAGTCTATTCCTTTAATGGATAGTTG
TAGCAGTGATACCAAAAGTACAGGGGTTTCCAGTGAAGGCAGTAACGAAG
CTGTCGAGGAGAAGGAGGGGAAATCCCCAGCGAAATCAGGGAATATTTTT
GCCAGGAGAAAGATAACTGAAGCAGCTGATCCGACACAATTAAAGGAAAA
CCCTTTCCATCGCCGTGGCGTTGTTATCGATCCATTTCAACAAAATAATA
TTCGATCAAAATTAAAGACCAGATTAAGAAAGATCGTGGACGAAAGATTG
ACTGTGAAACAGATTTTCTCGAGATATGTTGAAAGTTCAACTCTTCACGG
ATTCTTGTATACTTGTTCAGATACTTATATCATAAGGAGATTCTTATGGG
CGTGCTTAATGATCTTAGGTGCAATATACTTTTTGGTCAAACTAAGAGAA
GGTATCATAGAGTACTTCGAATATCCGTTCAGCACATTGTCGATCATTGA
CTTTCCAGATATATTGGAGTTCCCAACAATCAGTTTCTGTTTAGTCAACG
GATACAAACATAAAGAACTCAATGAGAGTAGATTAGGACCTTTATTACAA
AATGGTAGATTTCCTATCCATTCAAGTTGGTTGGACCCTGGGTACGACAT
CCCCGGTGATGAACTGGTTGAGGTGATGAATAATATCTCATTCACACCTT
CAGATGTTTTCGAGGAATGTGATTGGATAAAACGAGACACAGCTCACCCA
TCGGTGCCACCCAATAAATGCGACGCTGCAAATTTCACCACATTCTTCAA
TAAACAAAACGAGAAATGTTTCATGTTGAATTCAAACCAAAAAGGTCACC
CTTTATTAAAAGTCAATCACGAAGGTTTAAAATACGGCTACGAAGGACTT
TTTGATATGAGGACTTCGAGCGCCTTTTTGACACACCCCTTTGCTGGATT
GAGGGTGTATATTCATTCTCACCACGAACCTGCAGGCTCAGGATCAAGCT
TCTTGTTGTCGCCTGGTTTCCATTACTACGTCAAGATGGACATGCACGAG
ACACACAATCTTGAACCTCCGTACAGTACACAGTGTGGTGAAATccaatt
aaaatatttcgatACATACAATCAGAAAGCATGTTTATTAGAAAAGTTGA
CGGATTATGTTGGTGAAAAATGCGGATGTAGAGAACCATTCATGGCAGAA
AACGGTTTGCCGAGCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTC
TGCTAAAGACTCTTTCAGTGAGTACAAATTTCGTGAGGGTTGTCCAGTAG
ACTGCGTACAACATTATTATCGATATCAGATCACTGATTCGCGCTTTCTA
CATAACCCACCAACAGGAGTTGAAGCTCAAGTGTTGCGAAATGAAAATGC
AAGGAAGGGACAAAATTCATCACATATGTTGGAACTTGTTGAGGAGCTGT
CCCCTGAAGAATTAGCTCATTATGTTGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014185-exon-sc0000183-1491911889:59938..60303 | TCONS_00014185-exon-sc0000183-1491911889:59938..60303 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1510915933:59938..60303 | TCONS_00014185-exon-sc0000183-1510915933:59938..60303 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1575043694:59938..60303 | TCONS_00014185-exon-sc0000183-1575043694:59938..60303 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1491911889:61993..63343 | TCONS_00014185-exon-sc0000183-1491911889:61993..63343 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1510915933:61993..63343 | TCONS_00014185-exon-sc0000183-1510915933:61993..63343 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1575043694:61993..63343 | TCONS_00014185-exon-sc0000183-1575043694:61993..63343 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1491911889:64298..64445 | TCONS_00014185-exon-sc0000183-1491911889:64298..64445 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1510915933:64298..64445 | TCONS_00014185-exon-sc0000183-1510915933:64298..64445 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1575043694:64298..64445 | TCONS_00014185-exon-sc0000183-1575043694:64298..64445 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1491911889:66173..66232 | TCONS_00014185-exon-sc0000183-1491911889:66173..66232 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1510915933:66173..66232 | TCONS_00014185-exon-sc0000183-1510915933:66173..66232 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1575043694:66173..66232 | TCONS_00014185-exon-sc0000183-1575043694:66173..66232 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1491911889:66920..67225 | TCONS_00014185-exon-sc0000183-1491911889:66920..67225 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1510915933:66920..67225 | TCONS_00014185-exon-sc0000183-1510915933:66920..67225 | Clytia hemisphaerica | exon |
| TCONS_00014185-exon-sc0000183-1575043694:66920..67225 | TCONS_00014185-exon-sc0000183-1575043694:66920..67225 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:59938..67225 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001873 | ENaC |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006814 | sodium ion transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005272 | sodium channel activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006814 |
sodium ion transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005272 |
sodium channel activity |
Blast
BLAST of TCONS_00014185 vs. Swiss-Prot (Human)
Match: ASIC2 (Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.833e-17 Identity = 97/349 (27.79%), Postives = 141/349 (40.40%), Query Frame = 2
Query: 977 QIFSRYVESSTLHG----FLYTCSDTYIIRRFLWACLMILGAIYFLVKLREGIIEYFEYPFSTLSIIDFPDILEFPTISFCLVNGYKHKELNESRL---GPLLQNGRFPIHSSWLDPGYDIPG--DELVEVMNNISFTPSDVFEECDWIKRD-------TAHPSVPPNKCDAANFTTFFNKQNEKCFMLNSNQKGHPLLKVNHEGLKYGYEGLFDMRTSSAF-------LTHPFAGLRVYIHSHHEPAXXXXXXXXXX-XXHYYVKMDMHETHNLEPPYS-TQCGEIQLKYFDTYNQKACLLEKLTDYVGEKCGCREPFMAENGLPSCSLKQTILCS------LSAKDS 1930
QIF+ +STLHG F+Y IRR LWA + LV+ E + YF Y T L FP ++ C +NG++ L + L G LL ++ DP P + L + N + P F +++ R + +C +FTT F K KC+M NS + G PLL G G E + D++ T AG++V IHS EP GF +V L PP+ + E+ L +F Y+ AC ++ T Y+ E C CR M + P C+ +Q C+ L+ KDS
Sbjct: 18 QIFAN---TSTLHGIRHIFVY---GPLTIRRVLWAVAFVGSLGLLLVESSERVSYYFSYQHVTKVDEVVAQSLVFPAVTLCNLNGFRFSRLTTNDLYHAGELL--ALLDVNLQIPDPHLADPSVLEALRQKANFKHYKPKQ-FSMLEFLHRVGHDLKDMMLYCKFKGQECGHQDFTTVFTKYG-KCYMFNSGEDGKPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFIQELGFGVAPGFQTFVATQEQRLTYLPPPWGECRSSEMGLDFFPVYSITACRIDCETRYIVENCNCRMVHMPGDA-PFCTPEQHKECAEPALGLLAEKDS 355
The following BLAST results are available for this feature:
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