XLOC_007940 (gene) - C. hemisphaerica

Overview
NameXLOC_007940
Unique NameXLOC_007940
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000183:59938..67225+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007940 ID=XLOC_007940|Name=XLOC_007940|organism=Clytia hemisphaerica|type=gene|length=7288bp|location=Sequence derived from alignment at sc0000183:59938..67225+ (Clytia hemisphaerica)
CTCAAATTAAGCCTAAATTACGCGCAGCAGTAATTAATCCCTATCATTAA TATTGCAATGCTAATTAACTAATTATCGCCTTAAAGGTTATTATGGTTTG TTtgtcaaatcaaaataaacccgAGTAATCTAAAACGAAAAGTCTAAAAA TTGTCCTACGTCGAGGATTAAGTCAGACAATGTCGCACCCAGTCCTTCTA AGACACTGCTGCGAAACTGTGGCTTGTATTGTTTGGAGTCTGGTGTTGAG AGTGCGGAAAGCAATTTTGATGCGATTAGAAGAAAGAGTATCAACAGACA TGCTTGGAAGGATATGAGGAACAACAAGTAGTAAAGATGATGAAACCAAC CGTATAATTTTATAAGGTAagatttttgtatgttttttatGTTTCGAACC TGTTTACTCTATAAAAACCTTATATACACCACAGTATACTCTACCTTTTA AATTTGAAGAAGTCCATAGGATTCTTAAAATTTCTTTCCCCTAGATTTTG CTGCCAATTTACTGACTCGAACAATTTTGGAGTTTTCCAGCTGGTATATA AAATACACGAAATATGATTTCTATATTACCGGACTAGGATGTATCTGTTA TGAAAGGAATATTGACCAGAGTTAACaaacttacacgttttttttataag aacatccaaaatttttgaagccttcggatgttcttaactcttttagtttt aagcctaaaaatgttcttaacatatccttattttcaccattttttgagaa tttttctccattttcttGTACattgggtattttagagtcctcaaagcctt gtgttctttaaaagaaaaaacgtgtactgttatattagctctagtttaga cggccgactttctgccctgcctattctaattgttagagtaggcagaaaga gggcacaaagttggttgttaaaatctttgcttgacaAGGTTTgattgaag acattgcattgacgtcaaaagagggctatgcatcactttagacagccaac tttatgccctctttaattcacaattagaataggcagggcaaaaagtgggc cgtctaaactagagctaataGTTCACTATTTTGACAAAaacagtctgtaa aatactgtACAGTTCAGCTAGCTGAACTGAGATTTCACAAGTTTGCGTAT AGACTGGTTagtaaattttccaaaaaaccaaaccTTTCAGTTTCTTTTAT CATTTGAGTGAATAGGGTGACTTTCAGCTAAATTCTCTTAGCTCTTAGCT CAACGGAATTCCTTATTTTCGCCTTAGACTCCTTAGTTTAAAATTCTGAT ACAACTATAAATGGTTTATAAAATGCTTCGCCTAGTAGGATAACGATAAA CTTCAAAAAAGTGACCTGGTGCTTACTCATAGGAAACAGGCTATACTATA TCAGTCGTACTGAGCTTAAATAAGAAAAAGTACTTTACTTAATCGGCTTT CTTGGTGAAAGTCTGTTTAACGTCCCCTTCTTAATCCAAATAGATGGTTA TATACATATTAAATGTTCCCCTCTGTTTGCAGTAGGGTGATTTCGTATCG ACCTTTATCCGGAAAGTTTTACTCAAACACAGAATAGGATTGTCAGTTTT TATATCTTTAAAGCTGATGACTTTTTATAGGTTTAATTAAACTTCAAGCT TTGAATACAAGCTTGAATAAGAATGTCTGTTTAGTGCTTGTTTGAGTCAC TTATAGTATTTCcaatatgtcaaataaaaattctttttgtgaCAAATCGG ATGAAAGAATGGTTCTAAGTTTCCATTCAGAGAAAGGGCTTTGATGACTT ATACAAGAGAAGGATGATATTTATAGTTTTACTGTCGGACCTCCTTGGTT TTGATGGAATTTACACTAAACAGCAAGAGGGTTTTGGGCAATTTTTCACC CTCTATTGGAATGCtaattatgttttttgcttttttgaatcctttgaaat tcttttgacTATATGAATATCCGACTATATTATTGCCAAGAATATTAAAA AAGGCAAAGTCAAATAAACTTTTAATAATTTCGGTCTCTTAAATATTTAC CGTAGACCAATACCAATATCCGACTCCAAGATGatgggaaaaatgaaatt cgCTGAGCTGGCACGAAAAGCGAACGCCAGACCAATACAAGAAGAACAGG AGACAGCAGAAATTGATCAAGAAGAAAAGATCGAAGAAAAACCACGTACT GAAACCTTTGCAGATCTTCCTCCTTTAGATGAGAACAAGTATGTTCTGGA TGAAGCTTATTTCATACCGATATCCACCATCAAAGAAAAGGCTATAAAAC CGAAAAAACCGGTCGCCCGAAAAATGTCTGGATTCACACGGATGGGATCA TATAAGAGCGCGCCGTTGAAAACAACCGACGAGTCTATTCCTTTAATGGA TAGTTGTAGCAGTGATACCAAAAGTACAGGGGTTTCCAGTGAAGGCAGTA ACGAAGCTGTCGAGGAGAAGGAGGGGAAATCCCCAGCGAAATCAGGGAAT ATTTTTGCCAGGAGAAAGATAACTGAAGCAGCTGATCCGACACAATTAAA GGAAAACCCTTTCCATCGCCGTGGCGTTGTTATCGATCCATTTCAACAAA ATAATATTCGATCAAAATTAAAGACCAGATTAAGAAAGATCGTGGACGAA AGATTGACTGTGAAACAGATTTTCTCGAGATATGTTGAAAGTTCAACTCT TCACGGATTCTTGTATACTTGTTCAGATACTTATATCATAAGGAGATTCT TATGGGCGTGCTTAATGATCTTAGGTGCAATATACTTTTTGGTCAAACTA AGAGAAGGTATCATAGAGTACTTCGAATATCCGTTCAGCACATTGTCGAT CATTGACTTTCCAGATATATTGGAGTTCCCAACAATCAGTTTCTGTTTAG TCAACGGATACAAACATAAAGAACTCAATGAGAGTAGATTAGGACCTTTA TTACAAAATGGTAGATTTCCTATCCATTCAAGTTGGTTGGACCCTGGGTA CGACATCCCCGGTGATGAACTGGTTGAGGTGATGAATAATATCTCATTCA CACCTTCAGATGTTTTCGAGGAATGTGATTGGATAAAACGAGACACAGCT CACCCATCGGTGCCACCCAATAAATGCGACGCTGCAAATTTCACCACATT CTTCAATAAACAAAACGAGAAATGTTTCATGTTGAATTCAAACCAAAAAG GTCACCCTTTATTAAAAGTCAATCACGAAGGTTTAAAATACGGCTACGAA GGACTTTTTGATATGAGGACTTCGAGCGCCTTTTTGACACACCCCTTTGC TGGATTGAGGGTGTATATTCATTCTCACCACGAACCTGCAGGCTCAGGAT CAAGCTTCTTGTTGTCGCCTGGTTTCCATTACTACGTCAAGATGGACATG CACGAGGTAAGAATAACGAGTTTATTTCACGCATGCATAATGGAAAAGAA TAAGACAAGGGGACGATAATTTAAAAATTACTTTCCACTTTACAAACTTT TTGAGAACTCCCACCCTgttttctttacttaaaaacgACTTaaaatggat ttttaacgtATTGTACTTATTGGCCCTCTAACCTTCTCGAGTATAACTCC AAGTAAAGAAGAACAGTCTTTTTCAGTAGTGATAAACCTCTGTATCAGTG GCCCAGCATGAATCTCGAGTCATTCTAAACCAATGGTTTCCCAATGTGGA TAAGATTTCATAGTCTTTTTCCAATACggttgttttaatttttcaaaaag gatgATCTTTTGTCCGAAAAATGCCAGAAGAAGAAACAGATTTttcgaaa ctttcaaatatattCATACATCTCTATTTCCTGATTAAGGTCAATATTAA ACAGGATAAAATCTCCCTAAAGATTTCGAGCTAAGCCTCTAATAAGTTGA TCGGAAAAGTCAATAATGGAATGTCTAAGTCACACAATGTCTATAAAGAG ATTAGACGAAAGTAAAAAGCTTCTATTCGTCAGTACTcattaagaaaatt tgaaacgtTCGGTATAGTACCTACCAATAGAAAAAATTTACATGGGCCAA ATTTTCATAATACTCAATTCAAGTCATTTCAGTGAAAATCCATCGATGGA AAATCCCAACGAAATAGTCCACGTCCTGCTTATTGTAAAAATCAGCTCGG AAAACCATGTTTCgaatacagtcaactctcttaTTCGAACCTCCCTTATT GGAATCTTTCTGTGATCCAAATTAAAAAGTCAGTTTCTTTCAATTGGAAA GAAGTGGTCTAAATTCCTTTCTGtagttcgaatctttctgtcCGTCTTCC TTGAAAATCTAATTTGAGAGAGATTCAACAACTGCAGTCACTTGTTTTCT TCACTTTTAGACACACAATCTTGAACCTCCGTACAGTACACAGTGTGGTG AAATccaattaaaatatttcgatACATACAATCAGAAAGCATGTTTATTA GAAAAGTTGACGGATTATGTTGGTGAAAAATGCGGATGTAGAGAACCATT CATGGCAGGTAAGCGAGGCTTCGATCATCCTTTtctaatgggctattcca gaaaaaatttgtaccccctTTGTTGAGGtggtcattttttaaaaaggtaa ccccctggattttttttctcgtttcATAGACTACCCTAAATTTTtgacct cgttttactgacGACCCTGGTTTTCCCACCTCACTTTACTGACCACCTTG aatttttacactcgaaaaaccagaccattctgaattttttattttccaga ccaccctggacgtcacacctcctcaataTAAGGTCATAGACTATTTCTCA ATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGACCTTAGTGA AACTTCTGGTTAGTACGATATCCCAATTTCCTCAACGCCAACCTCCTTAA GACCTTATAagcactacacgtttttttataagaatatccaaaatttagga tttgtttttgaagccttagggtTCTTAACTTCGGAGTTTAAACCctgaaa atgttcgtacatagcatgttctcattttcaacactttctgagcatttttg tccaatttcctACAAAATTTCgcaagctttaaaatgttctaaagtACATC Ctgatattttgaccatcgaagccttacgttcttatatagttttatcttat gaaaaaacgtgtatctgcCCACGTATAACTATTGGAGTACTCCGTTGAAG GATAATTCCTAGTAAATTAAATGAGTTTGATCCTAACTACGTTGACATGA TTAAATTTCCTATTTCTTTCTAGAAAACGGTTTGCCGAGCTGTTCACTNt tcgtcgaaaaattaagaacatcgtaagaacatgcccagcctcagtttgga aaaaaatgacaagaaactacaattttttcctcttttcaagcagttttaac caaagttagggatggattttctaaaatcgagagtcaaatattgtccaaat tttatcaACTTTAAGTGCTCTCTATTTTGCATGATGTTGTCGATTTaaag tagtctgaaaaattaagaacgcatttaagaaaaaaataagcacatccagg ctcagccaaattttaggtgttctaataaaaaaaaaacgtgtaccctaAAT TTTtgacctcgttttactgacGACCCTGGTTTTCCCACCTCACTTTACTG ACCACCTTGaatttttacactcgaaaaaccagaccattctgaatttttta ttttccagaccaccctggacgtcacacctcctcaataTAAGGTCATAGAC TATTTCTCAATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGA CCTTAGTGAAACTTCTGGTTAGTACGATAATATCCCAATTTCCTCAACGC TAACCTCCTTAAGACCTTATAagcactacacgtttttttataagaatatc caaaatttaggatttgtttttgaagccttagggtTCTTAACTTCGGAGTT TAAACCctgaaaatgttcgtacataacatgttttcattttcaacactttc tgagcatttttgtccaatttcctACAAAATTTCgcaagctttaaaatgtt ctaaagtACATCCtgatattttgaccatcgaagccttacgttcttatata gttttatcttatgaaaaaacgtgtatctgcCCACGTAAAACTATTGGAGT ACTCCGTTGAAGGATAATTCCTAGTAAATTAAATGAGTTTGATCCTAACT ACGTTGACATGATTAAATTTCCTATTTCTTTCTAGAAAACGGTTTGCCGA GCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTCTGCTAAAGGTAAA TATTTTCTAATCTGATTATTATAGTCCATTTAAGAAATTGCGTAATACTG TAAACTGTCTGAAAGATAGCTAAGATTTTCAATATCTTCAAACAGTTGAC CTGGGGTTTAAAAATTgtttcagttttttaaatttaaactaTAAAACCGT TCGTTTTGCAAGTTCAAAAGGGAAAGGAAATCTTACTTAAAACTCCTTGA GCGGACAATCGAGCTCATTAAATCTTTGAGATGACGTATAGCTCCACTTA CTAGCTTCTGCGCCATTGAATCATCGTGTTTCTCTATAGAGTcgacgaaa aataaaaattctaaggttattattttgaaatattattttattctGAAGCA ATAGGCCAACTAATGCTTAGAGAAAAAAAGTTCATAATAATGCTGACCCT TAGCCGCTAAAGTCCAAAGTACattattcaaataaaaaatcatgttCTAT CAAATTTCAGAGTAAGATACAGGACTCGGTGAAATCTGTCCTGTAAAATA TTATCCTCAATTATGATATGAATTCTCTTCTATTTNTAAGGTCATAGACT ATTTCTCAATGTGTTATGTAAAATACACGTCAATAAAGTTCATGCTTGAC CTTAGTGAAACTTCTGGTTAGTACGATATCCCAATTTCCTCAACGCCNTC AATTATGATATGAATTCTCTTCTATTTACCAGACTCTTTCAGTGAGTACA AATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTATTATCGATAT CAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAGGAGTTGAAGC TCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAATTCATCACATA TGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGCTCATTATGTT GAGTAAGTTCGACCACGAGATGTAAATTCTATGGGAACCCTTTTCCTAAG ACTTTGATGGCCTTTGATGGCTTTTCAGACTCTTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014185TCONS_00014185Clytia hemisphaericatranscript
TCONS_00014186TCONS_00014186Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014185-proteinTCONS_00014185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:59938..67225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0 0.02 0.02 0.38 0.34 0.44 0.15 0 0.02 0 0.03 12.17 10.99 0.01 0.01 0.9 0.76 28.5 23.91 2.1 2.63 1.96 2.51 4.02 4.16 0 0 0 0