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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014167 ID=TCONS_00014167|Name=TCONS_00014167|organism=Clytia hemisphaerica|type=transcript|length=679bp
ACAGGTGCGAAATTCGCAATGGGTTTAGCGTACGCTGAAGTGGCTGCTGA
AGCTGTTAATATGGTTCTGTCAATATTTACTGGAGGTTTTAATCCAGTCG
GTGCCATGAAAGCTGCAAGAAAAGCAGCCGATATGGCaaaaaagatgaag
aaattGGTCACCGTGATGAAGAAAATAGCAGCGTtaatcaaaaatcgaaa
actGTTAGGAACTatgttcaaaaaaatcaaatcgtCATACAAATCATTGA
AAATTACAGTATCAAAATTCTTCACAAGACAAAAATCTTTGGTCAAAGAT
TGGATTCAACGAAACAAGTTATCTGAATTGCAAGCTAaggatttgaaaaa
attacaatCTTTGGCTGATAAAGTGAAGACTGGTACAGAATTTTTAGATT
CGACACAAGATATGGTTAGCAATACTGTCAACTTCTTGAAAGCTGAAAGA
ACAGTAAGAATAGGATATGACCCAGGAAACCCAACCCAAGCTGTAACTAT
TGGTAACGAACCCTTAGCAACAGTTAAAGAAACCGTTGACGAATTTAAAA
TCAGAATGGCAAAAGACGCTGCTGAAAAAGGTCCGTAAAATTACCATAGC
TCGTGTGTGATTCTACAAATTCAATGCGcgaattcttgaaaaaaacgCAT
TCTCATTCACAAATTTAAttctaattttg Run BLAST on NCBI protein sequence of TCONS_00014167-protein >TCONS_00014167-protein ID=TCONS_00014167-protein|Name=TCONS_00014167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
TGAKFAMGLAYAEVAAEAVNMVLSIFTGGFNPVGAMKAARKAADMAKKMK
KLVTVMKKIAALIKNRKLLGTMFKKIKSSYKSLKITVSKFFTRQKSLVKD
WIQRNKLSELQAKDLKKLQSLADKVKTGTEFLDSTQDMVSNTVNFLKAER
TVRIGYDPGNPTQAVTIGNEPLATVKETVDEFKIRMAKDAAEKGP Run BLAST on NCBI transcript from alignment at sc0000183:215..1415+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014167 ID=TCONS_00014167|Name=TCONS_00014167|organism=Clytia hemisphaerica|type=transcript|length=1201bp|location=Sequence derived from alignment at sc0000183:215..1415+ (Clytia hemisphaerica)
ACAGGTGCGAAATTCGCAATGGGTTTAGCGTACGCTGAAGTGGCTGCTGA
AGCTGTTAATATGGTTCTGTCAATATTTACTGGAGGTTTTAATCCAGTCG
GTGCCATGAAAGCTGCAAGAAAAGCAGCCGATATGGCaaaaaagatgaag
aaattGGTCACCGTGATGAAGAAAATAGCAGCGTtaatcaaaaatcgaaa
actGTTAGGAACTatgttcaaaaaaatcaaatcgtCATACAAATCATTGA
AAATTACAGTATCAAAATTCTTCACAAGACAAAAATCTTTGGTCAAAGAT
TGGATTCAACGAAACAAGTTATCTGAATTGCAAGCTAaggatttgaaaaa
attacaatCTTTGGCTGATAAAGTGAAGACTGGTACAGAATTTTTAGATT
CGACACAAGATATGGTTAGCAATACTGTCAACTTCTTGAAAGCTGAAAGA
ACAGTAAGAATAGGGTATGTATCCTCactgaaattaaattaaattttagc
tatttaaGATGATAGAGGCCGATAGAGTCACTATACGTCAAAGCTTCATA
AGCTCTGCTTAAGACGCGTCGATTTTCGACCTTGCCTTTCCTATAAAGAG
CGTAAGTCGACTGGTAAAGAGAACGACAAGAGGcttaataaaattatttt
taaaaaacgctgagttttgttttctttttgtttgtttttgtgacgtcaat
tCTGGTTTGGAGTTCGAAAAAGAAGACGCTATGTCTTAACgtcaaaaaaa
cattcgaaaataaacGTTCATAACTCAAAAGaactttcgttttctctttC
GTATCTTTTAAACCAATTAAAACCCGTGTTGACGACAGCGAATATACCAT
GGAACTGGAACAAATCTCGGGACCCCCTATTTAGCTTTCGTTATTCTCTT
TAAAGTAGTTAGCAAGGCAATAAAAGATACGTTCTACTAAAGATACGTTC
CTCATAAAAGTAATTATTTGTTATATATTTCTTTAGATATGACCCAGGAA
ACCCAACCCAAGCTGTAACTATTGGTAACGAACCCTTAGCAACAGTTAAA
GAAACCGTTGACGAATTTAAAATCAGAATGGCAAAAGACGCTGCTGAAAA
AGGTCCGTAAAATTACCATAGCTCGTGTGTGATTCTACAAATTCAATGCG
cgaattcttgaaaaaaacgCATTCTCATTCACAAATTTAAttctaatttt
g Coding sequence (CDS) from alignment at sc0000183:215..1415+ >TCONS_00014167 ID=TCONS_00014167|Name=TCONS_00014167|organism=Clytia hemisphaerica|type=CDS|length=1176bp|location=Sequence derived from alignment at sc0000183:215..1415+ (Clytia hemisphaerica)
ACAGGTGCGAAATTCGCAATGGGTTTAGCGTACGCTGAAGTGGCTGCTGA
AGCTGTTAATATGGTTCTGTCAATATTTACTGGAGGTTTTAATCCAGTCG
GTGCCATGAAAGCTGCAAGAAAAGCAGCCGATATGGCaaaaaagatgaag
aaattGGTCACCGTGATGAAGAAAATAGCAGCGTtaatcaaaaatcgaaa
actGTTAGGAACTatgttcaaaaaaatcaaatcgtCATACAAATCATTGA
AAATTACAGTATCAAAATTCTTCACAAGACAAAAATCTTTGGTCAAAGAT
TGGATTCAACGAAACAAGTTATCTGAATTGCAAGCTAaggatttgaaaaa
attacaatCTTTGGCTGATAAAGTGAAGACTGGTACAGAATTTTTAGATT
CGACACAAGATATGGTTAGCAATACTGTCAACTTCTTGAAAGCTGAAAGA
ACAGTAAGAATAGGATATGACCCAGGAAACCCAACCCAAGCTGTAACTAT
TGGTAACGAACCCTTAGCAACAGTTAAAGAAACCGTTGACGAATTTAAAA
TCAGAATGGCAAAAGACGCTGCTGAAAAAGGTCCGTAAACAGGTGCGAAA
TTCGCAATGGGTTTAGCGTACGCTGAAGTGGCTGCTGAAGCTGTTAATAT
GGTTCTGTCAATATTTACTGGAGGTTTTAATCCAGTCGGTGCCATGAAAG
CTGCAAGAAAAGCAGCCGATATGGCaaaaaagatgaagaaattGGTCACC
GTGATGAAGAAAATAGCAGCGTtaatcaaaaatcgaaaactGTTAGGAAC
TatgttcaaaaaaatcaaatcgtCATACAAATCATTGAAAATTACAGTAT
CAAAATTCTTCACAAGACAAAAATCTTTGGTCAAAGATTGGATTCAACGA
AACAAGTTATCTGAATTGCAAGCTAaggatttgaaaaaattacaatCTTT
GGCTGATAAAGTGAAGACTGGTACAGAATTTTTAGATTCGACACAAGATA
TGGTTAGCAATACTGTCAACTTCTTGAAAGCTGAAAGAACAGTAAGAATA
GGATATGACCCAGGAAACCCAACCCAAGCTGTAACTATTGGTAACGAACC
CTTAGCAACAGTTAAAGAAACCGTTGACGAATTTAAAATCAGAATGGCAA
AAGACGCTGCTGAAAAAGGTCCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014167-exon-sc0000183-1491911889:215..678 | TCONS_00014167-exon-sc0000183-1491911889:215..678 | Clytia hemisphaerica | exon |
| TCONS_00014167-exon-sc0000183-1510915933:215..678 | TCONS_00014167-exon-sc0000183-1510915933:215..678 | Clytia hemisphaerica | exon |
| TCONS_00014167-exon-sc0000183-1575043694:215..678 | TCONS_00014167-exon-sc0000183-1575043694:215..678 | Clytia hemisphaerica | exon |
| TCONS_00014167-exon-sc0000183-1491911889:1201..1415 | TCONS_00014167-exon-sc0000183-1491911889:1201..1415 | Clytia hemisphaerica | exon |
| TCONS_00014167-exon-sc0000183-1510915933:1201..1415 | TCONS_00014167-exon-sc0000183-1510915933:1201..1415 | Clytia hemisphaerica | exon |
| TCONS_00014167-exon-sc0000183-1575043694:1201..1415 | TCONS_00014167-exon-sc0000183-1575043694:1201..1415 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:215..1415 + |
Blast
The following BLAST results are available for this feature:
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