TCONS_00014130 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014130
Unique NameTCONS_00014130
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3210

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014130 ID=TCONS_00014130|Name=TCONS_00014130|organism=Clytia hemisphaerica|type=transcript|length=3210bp
tttagGGACTCAAACATATGTCCAATCGACCATGAAGTTATTGAGCTAGA
CGGCACTTATCCAGATAGAGCAAAACAACGAGAGATTCTTATGCTGGCAT
GCTTTTGCCCAAATGCAAAGTTTGGATGTGGCTGGCAAGGATCCGTCAAA
CTGTTAGAGGATCACAATGCAGTATGTCAATTCGGTCCAACAGAATGTGT
CTTTTGTTCCAAGAAATTTCCTCCCAGCGAAATGGAACAACATCAGAAAC
AATGTGTTCTGGCAATGAGCAACATGGCATGTCCTTATGCACACGCTGGA
TGTCAATTTCAGGTTTCCGAATTCGAGTCAGTGGATGAGCACATCACAAG
AAATGCTTTACTTCATGCCAAAATGTTTTCCGAACATTACAAAGCAAACG
AAACTAAGCACCAGCAAGAAAAAACTGATATGGTTAACCAGATCAAAGGA
TTACAACTCGAGTTGCATTCaactaaagaaaaatttacaCAAACTACTCG
ACAAATGCAGCAAgagtttgaaaacaaaattgaagagtttcaaaaagttt
tgcagGTCAAATTATCAGAGGTGGAGGCTATTAAAGCCCGAGGCCCAAGC
GGTGGCGATGGCACAGTCATGAGTGCGGAGATGTCGTCTGGCATTCACAA
AGAGATAAAGAAGACACGCGATGACGTCACACAAATGAACAAGACTGTCA
GCAACATCACCCACAATCTCGCCGACGTCGACTTACGTCATCAGCTCCAC
GAAAACACGACATTCGACGGACATATGATTTGGAAGATCGACAATTTTGA
AACGCGATACCAGCAAGCGGTAATTGGAAAAACAACAGCTTTACACAGTG
CACCTTCATTCACCTCTCGATATGGGTACAAATTCTGCGCACGACTCTAC
CTGAACGGTGACGGAATGGGTAAAGGCACCCATGTGTCGCTTTTCTTTGT
CCTAATGAAATCTGAGTTCGATACTCTGTTAGAATGGCCTTTTAACAAGA
AAGTTACTTTCACTTTAATCAATCAGGAAAACCAAGAAAGGAATGTTGTG
GAAACGTTCAATGCTGATGTTAACTCCTCAAGTTTCAAGAAACCGACCAA
ACACATGAATATCGCATCAGGATGCCCTTATTTTGTTTCGCAGGAAAAAC
TGAAGAAGCCAAACTCGGGTTTTATCAAGGATGGATGCTTTTTTTTAGAG
ATAAAGCTCAAGTAAATGCTGGTAAACTTAACCCAGAATCACGAAATGTA
GTTTGTAAAATAACGCCAGTTCACTCTGAAAGATTTACAGGACTTAGAAG
TAATAAATTTATATTAGACttcatttttgttataaacttcTTGCGGATAT
TTTCGTTTCCGCAACCCTTGTACAAAATGGAATTTCAAAACTgtattttt
ttctgcaaaattcCAAACCTTTGATCTATACAATAAACACATTGAACATT
ATCTTAAAAATTATAATCATGTTTATACCTATTATCAGCAAAAGACAATC
AGAACCTGCCATTGCCACATATGTTCCTGCAGATCTTCATTTTATTACCA
AACAGATATGAAGTCGGTTCGAACTTCACGGAGATTTTCACCTACCTTGC
TACCCAGGAGAATTGGCGTCAACACACAAACTTATGTTAACTTTATATCT
TCAGTTACATTAAAACCGTACACTCCTCGGATATCAAAGTCAttgaaaat
taaccaaaaatattggaGTTGTACATTCTTACCACAACATTacatttcaa
agtttgattgtCCTTCGATTACACTACATTATATCAACGCTGTGAATCGA
CTTAACCGAAAAACGCACAAACTAATGTCATGTAAAGATGTTTCGAGTCC
TGATCTGGTAGATTTACACTATATAACACATCGATCCAAATCTTTAAATC
TTACGAAAAATAGTTCGAAGATAGATATGAAAACCATGATACAAGAACCT
CAAGCAACACTTAAGGCTTTAGAAATATGGAGCACGTGTGCTAGCTATGT
TAGAAAGCCGTCACTCTTATCATCGGCGTCAATACCGTCACTATCAACGG
CGAAATTGAAGCCCTGGTATTCTATTCACTCAAATCCATCCTATGATAAA
ACCCAAAACCCTGAGTCTTCAAACATTTCACAACAGAAATCCGCCGCCAA
CGCGCAAATTGATGTCGTATTTTCAAAACCATTGACAAAAGAAGATTTTA
CATCAACCGTTATCTTCACTATGAACACATTGAAAGATTTCTTACTCTTC
TCGGAGATGACCCagagttttcaaaaacttacaaTGGTGAACTCGAcaat
ttattattgttttaaTTCAATACTTGTTCAAAGAACGATTAatttgtttt
tcataaaaactaCAACACAACGATCTACAAAATCGTTGGAAAGTTCATCA
TGCACCAGAAACAGTAATACCACTCTCATCTATGACCATTATATGGGAAA
AAAGTTATTATGCTTTGCTATTATGACATGCCTCTCGCCAGACTGTCAAA
AAGTAGAATATATTTTGTGTTTCATGAATGGTCAACTATTGCTTAAAGTT
CGTAATGGTGTTATGTGGACAAGAAAAACTCTTCTTGGTAATGATTCGAT
ATTGGATTTGCTGAAAGTTTGTAATGGTGTAATGTGGAATAGAAAAACAC
TTCTTGGTAATGATTCGATGGTGGATCGAGTAACTTATGGCATGTCCAAA
AAGGACGTACGTTTGGTGCAGAAATTTGGGGACCTTAGACATGGTCATTT
ATGCGTCAAAGGAAGCGTATTAGGATGTAGATTTCAGAACTGCCTGTTAA
TAGaattaattttttgtcttttttgagaaattagggAAAAAGTGctttat
gacgtcattgatgATGATTTGAATGTCTCgaaaagtatttatcaaaagat
TATGAAATGAttatgttattttgattttattcctATTTTGATCGTTAGTT
TTTGAGATATTCAAATTATGTCGTCATAAATTACTTTTTCCTGAATttgt
taaaaaagtcaaaaaatttattctaTTAACAGGCAGTTCTGAAATCAACA
TgctaatacgcttcttttgacgtATAAATGACCATGCCTAAGGCCCCCAA
TTTTCTGCGCCAAAATTATGTTCATTTTGGACACCAAAGAATTCATTTTT
TCTTACCCGGTTCATAGACGGACTGAATTCTCTTGtaaaataataatgat
aatgataANN
Run BLAST on NCBI

transcript from alignment at sc0000181:87934..104723-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014130 ID=TCONS_00014130|Name=TCONS_00014130|organism=Clytia hemisphaerica|type=transcript|length=16790bp|location=Sequence derived from alignment at sc0000181:87934..104723- (Clytia hemisphaerica)
TTTAGGGACTCAAACATATGTCCAATCGACCATGAAGTTATTGAGCTAGA CGGCACTTATCCAGATAGAGCAAAACAACGAGAGATTCTTATGCTGGCAT GCTTTTGCCCAAATGCAAAGTTTGGATGTGGCTGGCAAGGATCCGTCAAA CTGTTAGAGGTATTTTCTTACTTAAAATTTTCTTTTACTATAAGGTTTTT ATGCTTTGTTATGAGACTCTGATTAAAAAAAATCGAATTTTCTTGAAAAG CATGTTACACAATCCCAACACAAATGCACCTTTATAAATTTTGAAATGTA ATTTGATACCCAATGAATACTAAAACAGGCTCTGTAAAATATACAAAACT CAAAAAGAAGTATTACATTGTCTTCATATGTTTAAGACAGTTTAATACTT TTAGGTAAAAAAGAATCTTTCAATTTTAATTAAGCCACGTGAAGATATAT CGNTTTGTTATGAGACTCTGATTAAAAAAAATCGAATTTTCTTGAAAAGC ATGTTACACAATCCCAACACAAATGCACCTTTATAAATTTTGAAATGTAA TTTGATACCCAATGAATACTAAAACAGGCTCTGTAAAATATACAAAACTC AAAAAGAAGTATTACATTGTCTTCATATGTTTAAGACAGTTTAATACTTT TAGGTAAAAAAGAATCTTTCAATTTTAATTAAGCCACGTGAAGCTATATC GTAATAATATGGCGAGCTTTCCAAAAGTACCAAATTTAACTTTTTTGTGG ATTATAATAGCAAAATATTTGATTTCTGATCTTAAAAGTTAACATTTTCC GCCTAAAATATTATTTGCTGCTAACTTGCGCCACGGCTGAATTGGCAACT CTGGTCAGAATCAATAGTTTTATTAAAAAGGCCCTAACTTAATTCATTCT GCTAATGAATCATGAATCTTTCGGTAATTTTGCCAAATTAAATCTAAATG TAGATAGGGAATGATTACTTTTGCATTATGCTCGATGGGAGCTTTCCCCT CTTGAGTAATTGTTATATATCTAGAATGTACTGAAAAAAGATTGTTAATA TCAAAACAACCCGGTTCGTTTTTAAAAGGTTCGTCCTATTGCCGCGGGTA AAAATGAAGGCTTATCGTATAAATTTAAGATATTTAAATAGATATCGATG CCAACCAAATATCTTTTAATATGTTGCTCGTTGCATATTCTTGCTAGGGA GGGGGTTTATCTAAAGAATCCTGTATTGCTAAAAATAGACAAAAAGAACG ACAAATTTCACAAAAAACGACATATTTCGCCGTCCACAACCCCGACCGAA AGTGACTGTACCACCCTGTCATTCCCCTTCGTTTATCACGGGAATTAACT ACATGTGGTCTAAAAGAACGACAAATTACGCATGCGTGTTACAATGCAGG ATCCTTTAGAGGAACAGACTGTAGGCTACAAATTAAAAAAACTTGAAATG AATTTTCAGCTAAAAACTATACTAGTAAAACTCTCACATGTTAACAATGG AATTATAATTAGAAAAGGAACTCCTTCAAACTTCCCCTTTTATTTTTTGA GAAGACTGGGTAAATTCAAACTGACTCTAAATTCAATTTAATAATTTGCC ATTAAACTATTTTTATCCTTCCTCCTTGAAAAAACATAGAAAAGATTATA CAGAATTACTAAATCTTTCACAGCTTAAAAAATAGTGCGAACGAGGTCAA AACCCGTGCCCCTTTGATACATTGTTGAAATTCCTTTGTGGTTATTAGAT GATGAGAACTTAGCGTCATTAATAATGAAATTCATGCTTTTGTTTAAAAG AACATTTTTATAGATCTGCTGATTGTCAAAAATTATTGCAATTACTATTT CAAGCAGATATGGGGCTAGAATCCTGAAAATATGCACCTGACATCCCTCT GTACCGATAAAGATGAGAAAATTTGCCGAGTTCTAAAAGTAACCGAAAGG TTTTTACAAAAAAATTAATCAATATCATGTTCACATAACATGTGCATTTT AATCACGTGCCACTTATCTGATAAAGGCGTTATCGCATTCTCCATTGCCA ACTCATTCCCTTTTGAAGTTCATTGTACCGAGTAAAGGTAAAACAATGTA ATTCAAAGCTCATCTAATTATATTCAAAAGGATATTTATTTAATTTAGTA GACAAAACCTAAAAATCCATTACAATACGACACTCATTGAAATATCCACA GTCGACAAATATCCAAGAATTGACTTAATACAGTATAGCAAAATACCCTT GGATTTCTTTCAGACGTCACAACAGAAACTCTATATCAACCATTCTTGCA TTGGCCCTTTTTACACAACTGCCTTAAAAAACGTTACCCCTATAAAAATA AGGGCTACAAACAGCACAAAAACTTGCTACTGTGAGAAGTAATTGAGTCT GTATTCTGCTCTAGAATGTAAATCGAATGGCGAAGTGTAGTGTCACACCT ACAATCAGCTCCTAGTTTTTTTAACTGCCAAAACAGTTAGTAAGCAATAT TAATCAAGCTAACTTTTGTAGAATGCAAAATCTTGGGATATGCCACTGTT CATTACTACTCTCAACTATCCCTAAAAAAATTAATGAGAGTAGATTTTCC AGGATTCCAATATTTAGTTCGAATCAGCTAGAACCAACTGTGTATCTTTT TGTGAATGAAAAATGGAAAATGTTTTGATGTTAGTTTCACTACTGCTACT TTTGTGGAGGAATTTGTAAATGGGCTTCTTCGTACCTATTTAGAAATGCT TACATTAATCAGGTCACTAGTTTGAACCAATTTTGTCCAATCTGGCCCTC CTTTTGGTTTGTTCTGTCATCTTTGTGAGTTTGCGAGGAGAGGTGAAAAT GATCGATAAAGACTCAGCAAATCGGATCACAGATGATCTTCTCATGGGAA ATAAATCCTTCAATTTGATAAAGACTTGGTCCCATTTTACCAGATCGTTA CCAAAATGTAGCTGAAATTTCCATACATGCTATCTATTGCGTAATCTTTT TGAAAATGAGAACCCCTGCAAAAATATAAGGCGCGTATTCATTATTCTTT GATGATGGAATATAATTTAATCGAGCTCATCCGCGGAATTTGCTGTTAAC TTTCCTGCGAAAAAAAAATAATATATGCATTACGATCAATGGTATTTACC CTTAATTTGAATCCAAGAGTTTTTGAACTTTAAAAGATTACATCATGGAT CCCATACATTGAGAACTCTGATGATGAATCCCATGTGTGAGGAGGAATGA GGAGAAAAAGGAGAAAAAGAGAAGTTAAATGCGGGGTAAGTTAAGTGGTT TACAAATACTGTTTGAATTCTTATGTGAAAGCGTAAAAAGCATAGCAGAT TCAAAGTGTGAACAAATATGTTCTTATTTACGAGGCTGTTAATTTGTGTG GTCGAGAAAGGGAACCAGTCACAATAACAGAAATATGGAAAAGTTTCAAA TAATCTTCTATCTTAGAACGCGTACTATTTACTTCAATATTTGAAAAATT AAAGTCTATAGTCGTTTGGGAGAACAAGACGACCTATTAAATAACAAATT ACTCCAGACAGTAAAGTGGTATAAGATAACTTATCTTGTACCCAGGTAAC AGCTGTGTTGTACACTTCTGCTGGAGTAATTAGTTATTCAAAAGACCGTC GCGTTCTCCCAAACGACCAATCGCTCTAAGTGAGATATAATATATCATTT AGATTTCACTGCTTAAGATTGCTCGTTAATAATACATGGCCCCTAAAATC CCTTTTCTAGCTAAATACAACGATAAAGTTTTATCTATTACCCATTACTA GTTTGAAATTAGGGGAATTATATATTATTACTTCAACCATCTTTTTGCGA AGAACCTTAGTATATTTTAATATGTTCTTGTCTCACAAACATTTGTTTGT TATAGTCATTAAAAGTGTTTTCCATCTTTTAGGGAGTCGACGTCGACGAT TAAACAATGTTTGATGCTACGGCGGTAAACTTAAAGTTGTTGGAAACTTG GTGTCACCATAGCAACTGAAAACAATCAGAAAATTTGTAAACAAACGAAA TCAATTTTAAGCAAAGCGAAAATTGGACCACGATTGGTTATTCAAGATTC AGCTATCAAGAAAGGAATTTTAAATCAATCCCCTATGGAAAATGGAGCGA AATTTCGAAAGGAGTTATCTACTTGACACTGGGTAAACCGTCCCTTGTCT GGGGCGCCCAAGGGTCGCCCTCTAACGAAGTTGTGCTTGAAAACATACAA TTCTCAACTTTGATCTTTCAGACTTTTTTACCGTTCCTAATCCAGAGCGC TGAATTTTATTTTTCCGTTTTTTGGTTGCTTGTACGTTATCACTGGTTCT AGTAGTATAAAAACTTGTTCTACCGAATGAAGTATTTTGTTCATTTGATC CTATGGGAATATTGGACAAGAAAAGGAGTTGGGAAGTTTACGAATTTTGC AAAGAATCCATATTTTGTACAGGGTCCAGCTTCCGCACTTCACCAAGTGA TACAGACAACTTATTGTTATATTGGCCGAAACGACAGCCAGCTCTAACAT CCCGACGAACGACAGTGGTGGAAACTCGCCCGCATCGTCCCTGCCTGCTT CTTGATCTGTTTTTGGTTGTACACCGAACTGTGCGCTGATTTGGATAATT CTGGCGTTAAGCGTTTTGTTTCCATTACCATTACTTCTCTTAAGTCACAA GAGAAACTTTTTTTACGGTCTCCCAACTCCTTTGGTGAGAATGATCAATG AAATGTTTTGCTCCTATCTTCAGTGGCAAACATTTCGAAAACTATCCTGC ATCATTGCACTGGTCTACTAAAATTCATATTCTCGTCACAAGTTCGTCAT TTTGAATTCATCGAAGTTGCTATATGGTGAGTTCGGTCAGCTTCAACCAT CATATAACTGGAAAGGAAATATTTCTACCAAAATCAAATGTTGACTTCAA CCTTATTTCAGGATTATTGAGGTGTCTTATTGGTTTTCGGCTTCCAAAAA GCACTTTTTTTGATAGACAGTCTTTTTGCAAATATTTTAATGGGATAAAT TTTCGCGGGGATTAAACTCGTGGATTTCGTGGATTTGGGTATCATCCGCG AAATTAAGCCCCAATGAAGATTTGGAAAGGTCGTATACGAAATAATACTA TAAAAAGTTCTTTTGAACACAACTCAAAAAATGATAGATAATTTCTTTTA AAATGTTAACTGGCATCAAAGAACCGCTAATAATGTGTATTTCGACAACT ACTCTCGGGTACCTAATAGCTGTCCCCGCCCCCTTGCTAATTAATTTTTC GAAAGTTTCCTCTTTTGTCCTAATTCTGCTGTATTAGCAGGTATTAGCCT CCTTTTCAGGGTCAAGATGATTTTACAAGAATTTTTGTCATTGGATTGGT CGTTAACTATTCAAACAAAAACTTTTATTATATTTTTCTAAANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCCCCCCCCCCCCGCTTATTTCAAACCCCCCCGGC TATTAGGTACCCGAGAGTAGGATGTATAATTTGGCAGTATAAAGATATAA AACCATAAAAATATTGACTCCTAATAATGGCATCCGTGAAATTAAGTCCC CGCGAAATCATAAAATTTTGCGGATGAGTCCAACCGTAAAATTTAATCCT GCGAAAATTAATCCCATTAAAGTAGCTGGATGTAGCACTGGCAAGGTTCT AGAACAATTGCCCCAAAAAATTGAAGATTTAAAGGAGTCACAAACAGTAC GAACAGTCCAAAAGTTTATTGATTCTCATAAAGAAGACATTTTCTACAAA ATTGAGCCTGGTCACACTCTTCTGATTTCCCTTCCGAAAACAAAGGTTCG AGCCACGGCACAAGATCATCCGAAACGAAAAGAATTTCTCACTTCGAGAT TATGTGAGGATTTTTCTCAGCTCGCTTTGAACATTATTTACAGTTTTGAT GATCCCGATGCTCAAGTCGATAAACGCTTTAACACGCTAATTACTAACTG CTTATCCAGACACGCTCCAGAGAAACGGGTTAAGCTTACACGTCCCCCTG CTCCGTGGATGCAAGATCCTGATATTGTCCGATCTAGAAACCATTTAGAA GACCTTCGAAAAAAGAAAAGTCGCCGAATCAGATGATTGAGAGATGAATA CCGAAAGGTCAAAAACAGTCACAAAATAATGTTCTTATCGCTCAGCCGGT CAGCGACTACATCACATCGCCCCTCGTTCACATCATCAACAACTCAATTA AAACCGGTATCTTCCCGGACAAGTGTCTGCCCTATCCTGAAGGTGAGAAA TCCTGCGGTTGCAAAGGACTTTCGACCTGTTTCTATTCTACATTTACTAC CAAAGGATTTCAAAAAAATCATTCTCATGCAGATCCTTGATCACATCGAG TCAGGAAGTCATCGAAACCCCGTCAAATTCAAATATCGGAGAATGTTATA TCCTTTGAAAGGGATCTCACGGAACTATCGAGATGGTACACCAATAATAG TCTAATATTCAAGGACGACGAACTTCAAATGATAGTATTTCACAAACCAA GACCCCTCCCTACTTACCGATCCTACCTTGTTCGATCAAAAAATTGTCAC TCTATTAAACAGGAGTTAACGGTAAGTCTTTTGGGGGACATGATCGACCA AAACCTTACATGGATAGATCAAATCAATCACGTAACAAAATTTGCTCAGT CTTATCTTCAAGTGTTGAAGCAATTTCAACGATTTACACCTTTCAACGTC AGGAAAACGCTGGCAGAGTCGCTAGTCCTGTCTAAAGTGAACTACTGAAA TACTGTATACTCTTGGACACAGTACATGAAGAAAAAGTTACAGCGAATTC AAAATTGTGCTGCTGGCTACCTGCTCAGGAAATTCGCCCACCGTAAAGAT GTCGTCAACCTTGACTAGTTGCTGGTCGAAGTTGAAATGGATCTGGCTGT GGCAGGCTTTAAAGTGCTCATTGATAAAAACTGGCCATCATATTTTTCGA TGCCACGTCCCTAACCAGTTAGAGGTTTGAGAATAAATGATGTCGGTATT ACTATTGAAAATGGTGAAAATGGTTCCTTTCAGGAACAAATTGTAATGGT NCCGAAGAGTGCAAAAAGTGGTAATAGTGCAATTAACGATTAATCGCACT CCTCTAAACCAATCAGATTCGAGTAATTTTGCACGGCTGACGATTACTAT TGAAAATGGTGAAAATGGTTCCTTTCAGGAACAAATTGTAATGGTGTTTT AATGACCTTCCCAGACCTCTGAGGGAGGAAAAATCTGTAAAGATCTTTTA TAAGAATTTGAAAAAATATTTCTTAGATACATAGATCATTAGCAGCAACT TTAGCTTAAATTTATTCACCTGACCAACATAATCTTTTCTCGCGAGTGTA TTCAAGTTCTCTAATTTTCAATCACCTTTCATTGTTACAAATTTTCTCAT TCTCCAATTTTCAAAACAATATATTTAAAAGTTAAAATTTATTTTAATTT CTAAAAAATATTTATTTTTATTTTATTTAATGACTTCTTTGTTTCTGCGC TCGAGTATGTCCTCCGTTTCCCAAAGCCAATTCTAGCCAATCCACGCCTG ATCCGGTCGGATATCCATAATCTTTTTTTTTTCCAGTTTATCTGAGCTCA AGCCATCTCTACATTAAAAGCACATAGAGTAATATTTAGATTATGCTAGG TTACTATATTTAGTATAAAGTATTTTTTTATTTATGAACTAGAGTTAAAT TTGAACAATTTTCTAAGCCCCTTCCAGTTCTATCTTGCTTTCATAATTTC GCAATTACTCTATCGTTTCTGCGACAATTGTCTCGTATTTTGGTCGATTT TCCGACAAATTTGTTTTGTTTTATAAATTAAGTTTTTTTTAGATGTTATT TATTTATTTATATTTTTAAGTATTTTAATAGGGATAAGAACCGTAGTATA ATATGGAACTCGAAGTATGTTTAAAAACAAAAAAACAAGCAAAATCAAAA CGCCTAGATTATTTTTTTTTCTGCAAAGGCTACCTATCTTTTTTGATAAT ATTCCACTCCGGATTATCTTTTTTAACGAGCACAAAATCGCTACTTAATT CAAATTCTATCAAAAGTTATTGAGGTTTGAAAAAACACTGCCCGCTAATT TGAAATAGACTTTAGTGTACTATGAATTAACGAATAAGATAAAACTTCTG CAAAAGGGTTACTCAAATCAATACACTTGACCTGTCCCAACTGCCATAAT CCCTGAACATAACTCTGTGTGTATCTTTAAAATNTCAAATCAACACACTT GACCTGTCCCAACTAACATAATCCCTGAACATAACTCTGTGTGTATCTTT AAAAAATCATTTCATTCTAGGATCACAATGCAGTATGTCAATTCGGTCCA ACAGAATGTGTCTTTTGTTCCAAGAAATTTCCTCCCAGCGAAATGGAACA ACATCAGAAACAATGTGTTCTGGCAATGAGCAACATGGCATGTCCTTATG CACACGCTGGATGTCAATTTCAGGTAAATTAACAAGGCTTGATTTTCAAG ATCATCAAAATTCAGTGGTTTATGGTTGATCAGAAACGGTGTTTGTTTGT GGCTGCCATATTGAAATCAAGTTTTACTTTCCAGCTATGTGGTATGCTAA CCAGGCTGTCCAAATAGAATACACGCTTTTTTTATAAGAATAACTTCAGG GTGAGTACAACCAAACTAGCCAAAATACATTATTGTTATAAANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CCGACGGGGGTTTCTCCACTGAGGTTCTAAAAATGGACCCTACGTGGGAC TCGAATTTTGCGAAAAAACCCTGAATAGGACTGAAATTCCAAAATGTTCT CAAATTTTCTACTTTTTCCCCAAATTGTCCAAAAATAGGCACCCTACGAG GGACTGATTTTTCTATTTTGGTGTTTTTGCGACCCTACCTGGGACTCGTG GAGGTTTCTCTGTTATTTAAGTTATTTACATTTTCACAGGTTTCCGAATT CGAGTCAGTGGATGAGCACATCACAAGAAATGCTTTACTTCATGCCAAAA TGTTTTCCGAACATTACAAAGCAAACGAAACTAAGCACCAGCAAGAAAAA ACTGAAATGGTTAACCAGATCAAAGGATTACAACTCGAGTTGCATTCAAC TAAAGAAAAATTTACACAAACTACTCGACAAATGCAGCAAGAGTTTGAAA ACAAAATTGACGAGTTTCAAAAAGTTTTGCAGGTCAAATTATCAGAGGTG GAGGCTATTAAAGCCCGAGGCGTAAGTTTCATGCTAATTTCTTTTTCGAC TAATGATTTGGTAGGAACGATGCTCGCTATGATTTATTTTTACGAGAAGT TTTGTGCCAGGGAGCTTTCTTGATTTTAAGTTTTATCCTCCAACCTCAGG AGTCGTTAAATCGTAGGCTACTTTCTTTTATTCACAAGAAAGAAGAACAA AATAGTTAGCCAAAGGATAGTTAGCCAAAGGTATCTACGAACGGCCTACG GGTCCGTTACACTGTCTTAGGAAAGCCTACGGGTCTTTTTTTTTCAGCNC AACACTCTACTCGGCGGGTGCGACGCCGGGTGACGGCTAGTGGAAACCCT TTTTAATTACATGCCTCTGGAGAGGCTGCTAATTTAAAAGTAAACGGTCG TCTTTCTTCAAGTTGTGACACCGTCGACAAGAAACAACTAATGTCGTTTT GCTTGCATGTTGGATGTCAATCCAAGGTAAAAGGGTCAATTAGTCGGGCG ATCTTATTACAATTTCTCCCGGGGGAGGGGGTACTACCCTTGTCGACCGA CGGTTCTAAAAATGGACCCTACGTGGGACTCGAATTTTGCGAAAAAACCC TGAATAGGACTGAAATTCCAAAATGTTCTCAAATTTTCTACTTTTTCCCC AAATTGTCCAAAAATAGGCACCCTACGAGGGACTGATTTTTCTATTTTGG TGTTTTTGCGACCCTACCTGGGACTCGTGGAGGTTTCTCTGTTATTTAAG TTATTTACATTTTCACAGGTTTCCGAATTCGAGTCAGTGGATGAGCACAT CACAAGAAATGCTTTACTTCATGCCAAAATGTTTTCCGAACATTACAAAG CAAACGAAACTAAGCACCAGCAAGAAAAAACTGATATGGTTAACCAGATC AAAGGATTACAACTCGAGTTGCATTCAACTAAAGAAAAATTTACACAAAC TACTCGACAAATGCAGCAAGAGTTTGAAAACAAAATTGAAGAGTTTCAAA AAGTTTTGCAGGTCAAATTATCAGAGGTGGAGGCTATTAAAGCCCGAGGC GTAAGTTTCATGCTAATTTCTTTTTCGACTTATGATTTGGTGGGAACGGC ACTCGCTATGATTTATTTTTACGAGAAGTTTTGTGCCAGGAAGCTTTCTT GATTTTAAGTTTTATCCTCGAACCTCAGGAGTCGTTAAATCGTAGGCTAC TTTCTTTTATTCACAAGAAAGATGAACGAAATACTTAGCCAAAGGATAGT TAGCCAAAGGTATCTACGAACGGCCTACGGGTCCTTACACTGTCTTAGGA AAGCCTACGGGTTTTTTTTTCCAGCCAAGCGGTGGCGATGGCACAGTCAT GAGTGCGGAGATGTCGTCTGGCATTCACAAAGAGATAAAGAAGACACGCG ATGACGTCACACAAATGAACAAGACTGTCAGCAACATCACCCACAATCTC GCCGACGTCGACTTACGTCATCAGCTCCACGAAAACACGACATTCGACGG ACATATGATTTGGAAGATCGACAATTTTGAAACGCGATACCAGCAAGCGG TAATTGGAAAAACAACAGCTTTACACAGTGCACCTTCATTCACCTCTCGA TATGGGTACAAATTCTGCGCACGACTCTACCTGAACGGTGACGGAATGGG TAAAGGCACCCATGTGTCGCTTTTCTTTGTCCTAATGAAATCTGAGTTCG ATACTCTGTTAGAATGGCCTTTTAACAAGAAAGTTACTTTCACTTTAATC AATCAGGAAAACCAAGAAAGGAATGTTGTGGAAACGTTCAATGCTGATGT TAACTCCTCAAGTTTCAAGAAACCGACCAAACACATGAATATCGCATCAG GATGCCCTTATTTTGTTTCGCAGGAAAAACTGAAGAAGCCAAACTCGGGT TTTATCAAGGATGGATGCTTTTTTTTAGAGATAAAGCTCAAGTAAATGCT GGTAAACTTAACCCAGAATCACGAAATGTAGTTTGTAAAATAACGCCAGT TCACTCTGAAAGATTTACAGGACTTAGAAGTAATAAATTTATATTAGACT TCATTTTTGTTATAAACTTCTTGCGGATATTTTCGTTTCCGCAACCCTTG TACAAAATGGAATTTCAAAACTGTATTTTTTTCTGCAAAATTCCAAACCT TTGATCTATACAATAAACACATTGAACATTATCTTAAAAATTATAATCAT GTTTATACCTATTATCAGCAAAAGACAATCAGAACCTGCCATTGCCACAT ATGTTCCTGCAGATCTTCATTTTATTACCAAACAGATATGAAGTCGGTTC GAACTTCACGGAGATTTTCACCTACCTTGCTACCCAGGAGAATTGGCGTC AACACACAAACTTATGTTAACTTTATATCTTCAGTTACATTAAAACCGTA CACTCCTCGGATATCAAAGTCATTGAAAATTAACCAAAAATATTGGAGTT GTACATTCTTACCACAACATTACATTTCAAAGTTTGATTGTCCTTCGATT ACACTACATTATATCAACGCTGTGAATCGACTTAACCGAAAAACGCACAA ACTAATGTCATGTAAAGATGTTTCGAGTCCTGATCTGGTAGATTTACACT ATATAACACATCGATCCAAATCTTTAAATCTTACGAAAAATAGTTCGAAG ATAGATATGAAAACCATGATACAAGAACCTCAAGCAACACTTAAGGCTTT AGAAATATGGAGCACGTGTGCTAGCTATGTTAGAAAGCCGTCACTCTTAT CATCGGCGTCAATACCGTCACTATCAACGGCGAAATTGAAGCCCTGGTAT TCTATTCACTCAAATCCATCCTATGATAAAACCCAAAACCCTGAGTCTTC AAACATTTCACAACAGAAATCCGCCGCCAACGCGCAAATTGATGTCGTAT TTTCAAAACCATTGACAAAAGAAGATTTTACATCAACCGTTATCTTCACT ATGAACACATTGAAAGATTTCTTACTCTTCTCGGAGATGACCCAGAGTTT TCAAAAACTTACAATGGTGAACTCGACAATTTATTATTGTTTTAATTCAA TACTTGTTCAAAGAACGATTAATTTGTTTTTCATAAAAACTACAACACAA CGATCTACAAAATCGTTGGAAAGTTCATCATGCACCAGAAACAGTAATAC CACTCTCATCTATGACCATTATATGGGAAAAAAGTTATTATGCTTTGCTA TTATGACATGCCTCTCGCCAGACTGTCAAAAAGTAGAATATATTTTGTGT TTCATGAATGGTCAACTATTGCTTAAAGTTCGTAATGGTGTTATGTGGAC AAGAAAAACTCTTCTTGGTAATGATTCGATATTGGATTTGCTGAAAGTTT GTAATGGTGTAATGTGGAATAGAAAAACACTTCTTGGTAATGATTCGATG GTGGATCGAGTAACTTATGGCATGTCCAAAAAGGACGTACGTTTGGTGCA GAAATTTGGGGACCTTAGACATGGTCATTTATGCGTCAAAGGAAGCGTAT TAGGATGTAGATTTCAGAACTGCCTGTTAATAGAATTAATTTTTTGTCTT TTTTGAGAAATTAGGGAAAAAGTGCTTTATGACGTCATTGATGATGATTT GAATGTCTCGAAAAGTATTTATCAAAAGATTATGAAATGATTATGTTATT TTGATTTTATTCCTATTTTGATCGTTAGTTTTTGAGATATTCAAATTATG TCGTCATAAATTACTTTTTCCTGAATTTGTTAAAAAAGTCAAAAAATTTA TTCTATTAACAGGCAGTTCTGAAATCAACATGCTAATACGCTTCTTTTGA CGTATAAATGACCATGCCTAAGGCCCCCAATTTTCTGCGCCAAAATTATG TTCATTTTGGACACCAAAGAATTCATTTTTTCTTACCCGGTTCATAGACG GACTGAATTCTCTTGTAAAATAATAATGATAATGATAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007909XLOC_007909Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014130-exon-sc0000181-1575043694:104565..104723TCONS_00014130-exon-sc0000181-1575043694:104565..104723Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1575043694:95151..95303TCONS_00014130-exon-sc0000181-1575043694:95151..95303Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1575043694:92105..92134TCONS_00014130-exon-sc0000181-1575043694:92105..92134Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1575043694:90824..91075TCONS_00014130-exon-sc0000181-1575043694:90824..91075Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1575043694:87934..90549TCONS_00014130-exon-sc0000181-1575043694:87934..90549Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1510915933:104565..104723TCONS_00014130-exon-sc0000181-1510915933:104565..104723Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1510915933:95151..95303TCONS_00014130-exon-sc0000181-1510915933:95151..95303Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1510915933:92105..92134TCONS_00014130-exon-sc0000181-1510915933:92105..92134Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1510915933:90824..91075TCONS_00014130-exon-sc0000181-1510915933:90824..91075Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1510915933:87934..90549TCONS_00014130-exon-sc0000181-1510915933:87934..90549Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1491911889:104565..104723TCONS_00014130-exon-sc0000181-1491911889:104565..104723Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1491911889:95151..95303TCONS_00014130-exon-sc0000181-1491911889:95151..95303Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1491911889:92105..92134TCONS_00014130-exon-sc0000181-1491911889:92105..92134Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1491911889:90824..91075TCONS_00014130-exon-sc0000181-1491911889:90824..91075Clytia hemisphaericaexon
TCONS_00014130-exon-sc0000181-1491911889:87934..90549TCONS_00014130-exon-sc0000181-1491911889:87934..90549Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000181supercontigsc0000181:87934..104723 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.55561 0.700974 0 0 0 6.68475e-06 3.7814 1.37094e-07 0 0 0 0 0 0 1.2702e-07 0 0 0.0330969 0 0 0 0 0 0 0 0
Blast
BLAST of TCONS_00014130 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.097e-60
Identity = 146/478 (30.54%), Postives = 224/478 (46.86%), Query Frame = 1
Query:   19 CPIDHEVIELDGTYPDRAKQREILMLACFCPNAKFGCGWQGSV-----------------------------KLLEDH-NAVCQFGPTECVFCSKKFP-----------------------------PSEMEQHQKQCVLAMSNMACPYAHAGCQFQVSEFESVDEHITRNALLHAKMFSEHYKANETKHQQEKTDMVNQIKGLQLELHSTKEKF---TQTTRQMQQEFENKIEEFQKVLQVKLSEVEAIKARGPSGGDGTVMSAEMSSGIHKEIKKTRDDVTQMNKTVSNITHN---------------------LADVDLRHQLHENTTFDGHMIWKIDNFETRYQQAVIGKTTALHSAPSFTSRYGYKFCARLYLNGDGMGKGTHVSLFFVLMKSEFDTLLEWPFNKKVTFTLINQENQERNVVETFNADVNSSSFKKPTKHMNIASGCPYFVSQEKLKKPNSGFIKDGCFFLEI 1203
            C    E I  D  + D   +REIL L  +C N   GC  Q  +                             K L DH    C++    C  C  + P                              SE+  H  +CV A S   C +   GC FQ +  + +  H   +A+ H  +  E   + E K    + + V + K +Q  LH+    F    +  ++M +  E+KI   Q+V+  +  +++ +             +  M S + + ++    ++  ++K+   +  N                     LAD+DLR Q+ E  +++G +IWKI +++ R Q+AV+GKT +L+S P +T  +GYK CAR+YLNGDGMGKGTH+SLFFV+M+ E+D LL WPF +KVT  L++Q +  R++ + F  D NSSSFKKPT  MNIASGCP FV+Q  L+  N  +IKD   F+++
Sbjct:   88 CTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPST--CSFKRYGCVFQGTN-QQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQ-SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSV-ESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE--NGTYIKDDTIFIKV 558          
The following BLAST results are available for this feature:
BLAST of TCONS_00014130 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF32.097e-6030.54TNF receptor-associated factor 3 OS=Homo sapiens G... [more]
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