TCONS_00014055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014055
Unique NameTCONS_00014055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1025

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014055 ID=TCONS_00014055|Name=TCONS_00014055|organism=Clytia hemisphaerica|type=transcript|length=1025bp
TTCATGTCATGAAAATATATCTGACGACAAACTTATCTAAAGTTGAAGAT
TGCAGGCTAAAAGAAATCATAACAGAATTCGAAGAAGATTCCCATTAATC
AAGATGGTACCGTTAAAAATTCTCTCCATTTTAGCAACTGcagCATGTTG
CATGGGAATACAAACTCAAAAAGGCGTCAACATTCCTGGGATTTCCCTTG
AAGAAACGACAAGCATCCATAACCAAATTCGACATCTTCACAAAGACACA
AAAGATTTGCAAGGCAGCGAAGAGCTACAAGATCAAGCCGCCAAATGTGC
AATGTCAATCTTAGATCAAGACGAGGATCCTTGTAAAGAACAAAGTACAT
TTGGCATCAATATGGGTCACTATAAGAAATTCTTGAATGCAACTTCCCTG
AAAACAACGATAGTTCATTGGTACCATGAGTTGAGGAGAGTGAATTTCAC
CAGTGATGATTGGGCCCTAAAGATGGCCAATGATTTCTCAAAATATGCCA
ATGGATCACAGATTATTTGGAAAGGAACCACTCATGTCGGATGTGGAGGT
GCCACCAAAGCCGGAATCCCACCAGCCAGCGTCTTCGTTTGTTTATACAA
CCCTGCAGGGAATAAAATGAATACTGTGTCTTCAATGGACCTCATCAAGA
ATCTGGGAGCAAAGAAACATCCTAATAAACATATCCTTCATGATAATGGA
GGTTGCAAAGACTACCACGGCCTCTGCAAACAAATACCAGTCTACAATGA
GGCGTTACGAGAAGCAACATGTGACTTGGCTGCACATCGAAGCAAAGTCA
GAGATTGGTGCCCTAAAGCGTGTGGAGCTTGTTGAATGCTTAGTATTTTC
AAATCATGTGTTGTATAAAAAGAATGCTAATTTTATGATATCTTTCAATC
CATAAAtaaatgcttttgaaaattgttttacaGGGAGCCATTCATCAAGA
ACGTACGCAGCGAATAAAGGGGGAAGGGGAGTGAGGGTTTAGCAAAAGCT
AAGTACCTCTATTGTTTGACTGAGG
Run BLAST on NCBI

protein sequence of TCONS_00014055-protein

>TCONS_00014055-protein ID=TCONS_00014055-protein|Name=TCONS_00014055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
MVPLKILSILATAACCMGIQTQKGVNIPGISLEETTSIHNQIRHLHKDTK
DLQGSEELQDQAAKCAMSILDQDEDPCKEQSTFGINMGHYKKFLNATSLK
TTIVHWYHELRRVNFTSDDWALKMANDFSKYANGSQIIWKGTTHVGCGGA
TKAGIPPASVFVCLYNPAGNKMNTVSSMDLIKNLGAKKHPNKHILHDNGG
CKDYHGLCKQIPVYNEALREATCDLAAHRSKVRDWCPKACGAC
Run BLAST on NCBI

transcript from alignment at sc0000180:68090..76059-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014055 ID=TCONS_00014055|Name=TCONS_00014055|organism=Clytia hemisphaerica|type=transcript|length=7970bp|location=Sequence derived from alignment at sc0000180:68090..76059- (Clytia hemisphaerica)
TTCATGTCATGAAAATATATCTGACGACAAACTTATCTAAAGTTGAAGAT
TGCAGGCTAAAAGAAATCATAACAGAATTCGAAGAAGATTCCCATTAATC
AAGATGGTACCGTTAAAAATTCTCTCCATTTTAGCAACTGCAGGTACAAT
TTTTTTCTAAATTTTTTTTTCCAAAATAATAAATAATAATTCTTAAAAGG
CTTTTATAGCGTAATATGATTGGAATCAAAAAATTTGGTGCGGATCGATT
TTTTGTTTTGAAAAGACTTCTGATGACAGAAAAATTTTCTTGTTTTTATT
ACAGCATGTTGCATGGGAATACAAACTCAAAAAGGCGTCAACATTCCTGG
GAGTAAGTTGAGTACTTTTTTTCAAGTCCTTTAACAATCTCCTTGCTTTT
TTCTCCTACATTCTTTATTAAAAGAACCAGTAAAGTTTTGTTAATGTTCA
GTTGTTTTCATTTTTTGACACTTGAGTTTAAAACTGTTCTTATCTCCCTC
TTATTTTCAGGGTAAAATTTAGGTATCTTAGCCTTTATACCCAATTTTCA
TTACTTTTGACTTTTAAAATACTTGAAAATCAGCATTTTCAGACATAGCA
TTATTCTTAAAATTTCTCTAATTTTTCAGCGATTTTCTTGAGTCAAATTG
TTCTTATAAAACTGTTCTAATATAGAAAAACAGATTTTACGGAAAGAGGA
AATTTCGAAAAAATCGATCTAACTCAGAACCTATGGTTCATTCCAGTTAA
AGGACAAGAAAGTAAGAAGTTTGAGCTCTTAGTAAAGAAGTCTCACTTGA
TTCCATACTACAGGCTAAGATTCCTGGTGTAGAGCATATATTTAGGTCTT
ATCTGGCACCCAGATGGTAAAATTTTCATCCGACACGCTAAAGCTCTGAA
GGCCGGGAAAATTTTGAACATCTGGAAGGTTCACATTACGGAATTTTCTG
AGCTCGCGTCAACAATTTTGCAGTGGGAGGTCTGGTAACCGTTTTCGGGT
ATTGGCGGGTCCAACCGAAATATTTATAGCTTTACACGCAAGGGCTGTTG
AACCCAACTGAGGATCCGGCACATCAAAGGTCGACTATTATTCCACTCCG
ATGGGGAATTGGCCCTCTCCTTTAGAGCTCTAGCGTGGGCCGCCGCCAAT
CCACCATCGGAATATCAGATAAATTTAGGCCTGATAGCGAAGCAAGTCTC
GCAGTTTTTAGTTAATCTTTTACATCACTGAATTTGTAAAACAAAAAATT
CTTTAAATATCATTTGACAGTTTCCCTTGAAGAAACGACAAGCATCCATA
ACCAAATTCGACATCTTCACAAAGACACAAAAGATTTGCAAGGCAGCGAA
GAGCTACAAGATCAAGCCGCCAAATGTGCAATGTCAATCTTAGATCAAGA
CGAGGATCCTTGTAAAGAACAAAGTACATTTGGCATCAATATGGGTCACT
ATAAGAAATTCTTGAATGCAACTTCCCTGAAAACAACGATAGTTCATTGG
TAAAAGAACTTTCTGTTTCATTGGTCCGGCCTGCTTAAAACCATAGTTCG
AAAATGAGTTGAAAGATACAGTCTCCGTTACTCGAACAAATACGGGAAAC
AAATTAATTTGTTCGAATTAAGGAAATTTCGAGTTAGGAAGTAAGGCTTA
TAAGGCATTGTTAACTGAAGGGAACATAAGACTTGTTCGAGTTAAGGAGA
CATTCGAGTTCGAGAGGTTCGAGTTAACAAAACTCCACTGTACCGTACCT
TCTTCTTCTATCATGGGAGTATTGTTTATTCCGACCAACATCAAGCATTA
ACTAGATCTTTCAGCCAAATTTCATTGAATTTTATTTAAATTCAATTGAA
GGCTGGAAGAGAACTTCAAATCCATGTAGAAAATCTTTCCATTTAAATTT
ACAAAAGAAATTCCACTTCATTTCATTGTTATACACCAACGTAATGTTTT
TCAACAGTATTCACATTTTGATATGACGGTTCCGTTTTGCTCCGAAATGA
AATGAAGCCATTCTATTGGTGAGAAATGACGTAAATATTGAATTTAACCA
ATAGGATTCAGTACAAAAACGGAACCGTTACGTGCGAACGTGATCTTAGA
CCATGTTCACACGTTACTGTTCCGTTTCCCTCCGGTATGATTTTCGTTAC
GGATCTAGTGTGTTCATATTTGTTTCGGAACGTTTCGGAGCAAGAAAACA
GAGAAGTTCCGTTCCGATGAAAAATGTGGATCGAAACCGTTTCCATCTGT
TTTTCTTTGTAACGTCTTCTTTTTTGACGTTTCGAATCTTGACGTTTACA
CTTGTTTCGGAACCGTTTCTCTTCGTTTCGGAACGGAACCGTAACGTCTG
AACGTGATAACAATAATATCAAACTTGACAGACCATTTCTCCTCCTCCTC
CTCTCATCCCCAGGTACCATGAGTTGAGGAGAGTGAATTTCACCAGTGAT
GATTGGGCCCTAAAGATGGCCAATGATTTCTCAAAATATGCCAATGGATC
ACAGGTAATTTTTCTTGTACAAGTTTTTATTATAAGAACATCCAAAATTT
TTGAAGCCTCAGGATTGAGTTTTGAGCCTAAGAATGTTCTTATTTTCACC
ATTTTGTGAGCATTTTTGCCCATTTTCTTAAAAAATTAGCTATTTTAGAG
TCTGCAAAGCCTTGATGTTCTTAACTTGTTCTTAACATTTTGGCCATCGA
AGCCTCGTGTTCTTATAAAGTTTTTTCTTATAAAAAACAGTTTAAACATC
CGTTGATGAGCCTCCCACACAAGCAAATCTAACTACTAATCCACTTTTCA
TCATTCTAAATTTAAACCCACACTTCGAAGAATTTCACACCTTTAGATCT
TCCTTACACGTCGTTCATTGCATAGAATTACAGACTAATTTTGGACACCA
CCTTCTCACAGACCCTGTAGGATTTTTTAAGTCAATGGAGGTAAAAATAT
GGTCTGAAACATAATGCGGATTGATATTCCCATATCTTTTTTGGCGGGGG
ATTTAAATTCTTCTGTTTTCAACTCAGAAATATCAGTTGGGATGGGGAAA
ATAGCATAATCTCCAGACAGTGTCAATCGAACGAATCAAATGCTGAATCA
ATTGTGAATCAATCGAATAATTGCGATTCAATTGTCAAACGCTGTCGAAT
TCTAACGGAATATTACCCAGGATTTACCGTTCAATCACTTCGATTACGTT
CGATTGTATTTGATTACTTTCGATTGATTTATTCGATTAATTCAATTGAA
TTCGCTCGCATTATTCTCTCCCGTACGGTACTTACGTGCTCGCTCTCATC
TGATTTTACGATGGCGTGTTGACGGCCGCCCACGATAAAGTCTTAAAAGG
AGTGGGCAAATTTTATTGTTGCCAAACTTATCGAAAATAATCCATTAGTA
ATGGAACCAATCGAAAGTGGTTCGTAATCGAACACAATCGAATATTACCC
AGGAACCGGCCGTTCGATTGAGATTCGATTGCGTTCGACAGTCGAATTGC
AATTATTCGATAGCGTTCGATTGCATTCGATCGGTTCAATTGCGATTTTC
GTTCGAACTTGTGATTGACACCGTCTGGTAATATTTTACAGTGAGGATTG
GTTTATTTAATTGTTGATTTGTGGGGACAAAATTTGGAGGGTAATATTTC
ACCAAAAACAATATTTTCAAAGGGGTCCCGCCAGCGGGTCTGTGAGAAGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAAGAACATC
CAAAATTTTTGAAGCCTCAGGATTGAGTTTTGAGCCTAAGAATGTTCTTA
TTTTCACCATTTTGTGAGCATTTTTGCCCATTTTCTTAAAAATTTGGCTA
TTTTAGAGTCTGCAAAGCCTTAACGTTCTTAACTTGTTCTTAACATTTTG
GCCATCGAAGCCTCATTTGTTCTTATATATATAACATAGTTTGTTCTTAT
AAAAAAACATGTAAACAATTTAAACATCCGTCGATGAGCCTCCCACACAA
GCAAATCTAACTACTAATCCACTTTTTCATTCTAAATCAAACCCACACTT
CGAAGAATTTAACACCTTTAGATTTTCCTTACACGACGTTCACTGCATAG
AATTACAGACTAATTTTGGACACCACCTTCTCACAGAACCTGTAGGATTT
TTTAATTCAATGGAGGTAAAAATATGGTCTGAAACATAATGGAGATTGAT
ATTCCCATATCTTTTTTGGCTGGGGATTTAAATTCTTTTGTTCTTCAACT
CAGAAATATCAGTTGGGATGGGGAAAATAGCATAATACCCAGACGGTGTC
AATCGAACGAATCAATTGCGAATCAATCGAATAATTGCGATTCAATTGTC
AAACGCTGTCGAATTCTAACGGAATATTACCCAGGATTTACCGTTAAATC
ACTTCGATTACGTTCGATTGTATTTGATTACTTTCGATTGATTTATTCGA
TTAATTCAATTGAAGTCGCTCGCATTATTCTCTCCTGTACGGTACTTACG
CGCTCGCTCTCATCTGATTTCCCGATGGCGTGTTGACGGCCGCCCACGCT
AGAGCCTTAAAAGGAGTGAAAATTTAATTGTAGGCAAACTTATCGAAAAG
AATCGATTAGTAATGGAACCAATCGAAAGTGGTTCGTAATCGAACACAAT
CGAATATTACCCAGGAACCGGCCGTTCGATTGAGATTCGATTGCGTTCGA
CAGTCGAATTGCAATTATTCGATAGCGTTCGATTGCATTCGATCGGTTCA
ATTGCGATTTTCGTTCGAACTTGTGATTGACACCGACTGGTAATATTTTA
CAGTGAGGATTGGTTTATTTAATTGTTGATTTGTGGGGACAAAATTTGGA
GGGTAATATTTCACCAAAAACAATATTTTCAAAGGGGTCCCGCCAGCGGG
TCTGTGAGAAGGGGATTGCTTTTGGTAAGTCCGAGAATTCACAAGGAAAC
TCTTTGAATTCTTTATTTCTTGTTTCTTGTTAATTGTATTTACGGCCAAC
TTGTGAAATGTAATCAAAGTAACGACTTTGGTAAAATGGCAACTATTTTG
CGTTTAATCAAATTTGGCAATATTTCATCTAACTTAGTCAAGATCTTTGA
TATTACGTTGATTAACACGATAAAAGTATAAAAATTTAGGACAACGTTGC
TAGGGACTACAATAAGACAAAAGAAATTAAATTTGTTGTTCTACTGGTCC
GACCGACCCTGTTTTTTACCGAAATTGAATAAAAAATGATATTGCAAATT
CACTGTTGTGAATGTTACAGATCGGCTATTAAATAGAATTGCAATTGCGT
AAAAGGGCTCTGAATGTATTCCACAGCCTTTATAGGCATGACATTATGAA
TTCCAAGTACTTTTGAATACATTCTGAGCTTCATTAAATGAAGAGGGTTA
AGTTAGAACCATATAAGATTCAAGCAATTCTTTTTGCACTTTTCAAACAT
TAAATTTGAAATACAAAATTTACTAACCGACCGACCGACCGACCGACCGA
CCCAAATTTTCCAACGAGCTGCCCTTAGAATAAAAATTTTAAGTTATTTC
GCCTAAGGAAGTTAATAATAGATTAAACTTANAGAATAACAATTTTAAGT
TATTTCGCCTAAGGAAGTTAATAATAGATTAAACTTACTCTCCATAGATT
ATTTGGAAAGGAACCACTCATGTCGGATGTGGAGGTGCCACCAAAGCCGG
AATCCCACCAGCCAGCGTCTTCGTTTGTTTATACAACCCTGCAGGGAATA
AAATGAATACTGTGTCTTCAATGGACCTCATCAAGAATCTGGGAGCAAAG
AAACATCCTAATAAACATATCCTTCATGATAATGGTACGTGTTGCTTTTT
TATAAGAAAAAATTTACAAAAACATGAGACTAGATTTCGGCAAACACAAA
ACGAAGAAAGATAAGACGAAAGACCAACACAGCCAAAGTTTTTACTTCTG
TAAACAAAATGTTTGTTAAATTATTGGCCCCTTCGGGTTCCTTTCAGCTG
GAAAAAAAAATACAATACTCTCCTATAATTCAAATCTTTCCCTAATTCCT
ATAAGATTCTTAAGTCCCTCTACCCCTGGGGGGGGGGGGGCACTCATATG
GTCCGACCAACGGCATGTGCCACCCTTAAGGATGTACTTTTTTGATGGAG
TGCACTACAAGAGTCTTCTTTTAGCTGGCTACCATGTGTTAAGGGACTGC
TGAATTGCAAGTCTGACAGTAAAATCGGATCCATCTTTACAGTTGTAACA
ACTCGCACCCATTGTGTCGACGCTGTAAGGGTCAGAAACGTTGGGTAAAA
TGCACTGTAAGGGTACCTTTTCACTGCTCAAGGGCTGCACTGTTAGGGCG
CAATTTTGAAAGCCATTTTTTTGGTGGCACATACCGTCCTTTAGCAATCA
AGGACCAACACCCCCCCCCCCCCCCAAAACTTTATTTCTAATCGTATCCT
TTTTTCAAACAATAGAGAAGTTTTCGCTCAGATTTTAAAGCAATCTCAAA
AAGTTTTCCTGTTTATTCGAAGACAGTTTGAGAATATTTTATTTTGAAGT
CGTTTGAGTCAGAGAAAAAGATACGGGTAGCCTCTATATACACTCCATCT
TGGCTTCTAGCATTGATTTATTCGATTTCTTTTTAATTTGCAGGAGGTTG
CAAAGACTACCACGGCCTCTGCAAACAAATACCAGTCTACAATGAGGCGT
TACGAGAAGCAACATGTGACTTGGCTGCACATCGAAGCAAAGTCAGAGAT
TGGTGCCCTAAAGCGTGTGGAGCTTGTTGAATGCTTAGTATTTTCAAATC
ATGTGTTGTATAAAAAGAATGCTAATTTTATGATATCTTTCAATCCATAA
ATAAATGCTTTTGAAAATTGTTTTACAGGGAGCCATTCATCAAGAACGTA
CGCAGCGAATAAAGGGGGAAGGGGAGTGAGGGTTTAGCAAAAGCTAAGTA
CCTCTATTGTTTGACTGAGG

Coding sequence (CDS) from alignment at sc0000180:68090..76059-

>TCONS_00014055 ID=TCONS_00014055|Name=TCONS_00014055|organism=Clytia hemisphaerica|type=CDS|length=4392bp|location=Sequence derived from alignment at sc0000180:68090..76059- (Clytia hemisphaerica)
GAGGTTGCAAAGACTACCACGGCCTCTGCAAACAAATACCAGTCTACAAT
GAGGCGTTACGAGAAGCAACATGTGACTTGGCTGCACATCGAAGCAAAGT
CAGAGATTGGTGCCCTAAAGCGTGTGGAGCTTGTTGAATTATTTGGAAAG
GAACCACTCATGTCGGATGTGGAGGTGCCACCAAAGCCGGAATCCCACCA
GCCAGCGTCTTCGTTTGTTTATACAACCCTGCAGGGAATAAAATGAATAC
TGTGTCTTCAATGGACCTCATCAAGAATCTGGGAGCAAAGAAACATCCTA
ATAAACATATCCTTCATGATAATGGTACCATGAGTTGAGGAGAGTGAATT
TCACCAGTGATGATTGGGCCCTAAAGATGGCCAATGATTTCTCAAAATAT
GCCAATGGATCACAGTTTCCCTTGAAGAAACGACAAGCATCCATAACCAA
ATTCGACATCTTCACAAAGACACAAAAGATTTGCAAGGCAGCGAAGAGCT
ACAAGATCAAGCCGCCAAATGTGCAATGTCAATCTTAGATCAAGACGAGG
ATCCTTGTAAAGAACAAAGTACATTTGGCATCAATATGGGTCACTATAAG
AAATTCTTGAATGCAACTTCCCTGAAAACAACGATAGTTCATTGCATGTT
GCATGGGAATACAAACTCAAAAAGGCGTCAACATTCCTGGGAATGGTACC
GTTAAAAATTCTCTCCATTTTAGCAACTGCAGGAGGTTGCAAAGACTACC
ACGGCCTCTGCAAACAAATACCAGTCTACAATGAGGCGTTACGAGAAGCA
ACATGTGACTTGGCTGCACATCGAAGCAAAGTCAGAGATTGGTGCCCTAA
AGCGTGTGGAGCTTGTTGAATTATTTGGAAAGGAACCACTCATGTCGGAT
GTGGAGGTGCCACCAAAGCCGGAATCCCACCAGCCAGCGTCTTCGTTTGT
TTATACAACCCTGCAGGGAATAAAATGAATACTGTGTCTTCAATGGACCT
CATCAAGAATCTGGGAGCAAAGAAACATCCTAATAAACATATCCTTCATG
ATAATGGTACCATGAGTTGAGGAGAGTGAATTTCACCAGTGATGATTGGG
CCCTAAAGATGGCCAATGATTTCTCAAAATATGCCAATGGATCACAGTTT
CCCTTGAAGAAACGACAAGCATCCATAACCAAATTCGACATCTTCACAAA
GACACAAAAGATTTGCAAGGCAGCGAAGAGCTACAAGATCAAGCCGCCAA
ATGTGCAATGTCAATCTTAGATCAAGACGAGGATCCTTGTAAAGAACAAA
GTACATTTGGCATCAATATGGGTCACTATAAGAAATTCTTGAATGCAACT
TCCCTGAAAACAACGATAGTTCATTGCATGTTGCATGGGAATACAAACTC
AAAAAGGCGTCAACATTCCTGGGAATGGTACCGTTAAAAATTCTCTCCAT
TTTAGCAACTGCAGGAGGTTGCAAAGACTACCACGGCCTCTGCAAACAAA
TACCAGTCTACAATGAGGCGTTACGAGAAGCAACATGTGACTTGGCTGCA
CATCGAAGCAAAGTCAGAGATTGGTGCCCTAAAGCGTGTGGAGCTTGTTG
AATTATTTGGAAAGGAACCACTCATGTCGGATGTGGAGGTGCCACCAAAG
CCGGAATCCCACCAGCCAGCGTCTTCGTTTGTTTATACAACCCTGCAGGG
AATAAAATGAATACTGTGTCTTCAATGGACCTCATCAAGAATCTGGGAGC
AAAGAAACATCCTAATAAACATATCCTTCATGATAATGGTACCATGAGTT
GAGGAGAGTGAATTTCACCAGTGATGATTGGGCCCTAAAGATGGCCAATG
ATTTCTCAAAATATGCCAATGGATCACAGTTTCCCTTGAAGAAACGACAA
GCATCCATAACCAAATTCGACATCTTCACAAAGACACAAAAGATTTGCAA
GGCAGCGAAGAGCTACAAGATCAAGCCGCCAAATGTGCAATGTCAATCTT
AGATCAAGACGAGGATCCTTGTAAAGAACAAAGTACATTTGGCATCAATA
TGGGTCACTATAAGAAATTCTTGAATGCAACTTCCCTGAAAACAACGATA
GTTCATTGCATGTTGCATGGGAATACAAACTCAAAAAGGCGTCAACATTC
CTGGGAATGGTACCGTTAAAAATTCTCTCCATTTTAGCAACTGCAGGAGG
TTGCAAAGACTACCACGGCCTCTGCAAACAAATACCAGTCTACAATGAGG
CGTTACGAGAAGCAACATGTGACTTGGCTGCACATCGAAGCAAAGTCAGA
GATTGGTGCCCTAAAGCGTGTGGAGCTTGTTGAATTATTTGGAAAGGAAC
CACTCATGTCGGATGTGGAGGTGCCACCAAAGCCGGAATCCCACCAGCCA
GCGTCTTCGTTTGTTTATACAACCCTGCAGGGAATAAAATGAATACTGTG
TCTTCAATGGACCTCATCAAGAATCTGGGAGCAAAGAAACATCCTAATAA
ACATATCCTTCATGATAATGGTACCATGAGTTGAGGAGAGTGAATTTCAC
CAGTGATGATTGGGCCCTAAAGATGGCCAATGATTTCTCAAAATATGCCA
ATGGATCACAGTTTCCCTTGAAGAAACGACAAGCATCCATAACCAAATTC
GACATCTTCACAAAGACACAAAAGATTTGCAAGGCAGCGAAGAGCTACAA
GATCAAGCCGCCAAATGTGCAATGTCAATCTTAGATCAAGACGAGGATCC
TTGTAAAGAACAAAGTACATTTGGCATCAATATGGGTCACTATAAGAAAT
TCTTGAATGCAACTTCCCTGAAAACAACGATAGTTCATTGCATGTTGCAT
GGGAATACAAACTCAAAAAGGCGTCAACATTCCTGGGAATGGTACCGTTA
AAAATTCTCTCCATTTTAGCAACTGCAGGAGGTTGCAAAGACTACCACGG
CCTCTGCAAACAAATACCAGTCTACAATGAGGCGTTACGAGAAGCAACAT
GTGACTTGGCTGCACATCGAAGCAAAGTCAGAGATTGGTGCCCTAAAGCG
TGTGGAGCTTGTTGAATTATTTGGAAAGGAACCACTCATGTCGGATGTGG
AGGTGCCACCAAAGCCGGAATCCCACCAGCCAGCGTCTTCGTTTGTTTAT
ACAACCCTGCAGGGAATAAAATGAATACTGTGTCTTCAATGGACCTCATC
AAGAATCTGGGAGCAAAGAAACATCCTAATAAACATATCCTTCATGATAA
TGGTACCATGAGTTGAGGAGAGTGAATTTCACCAGTGATGATTGGGCCCT
AAAGATGGCCAATGATTTCTCAAAATATGCCAATGGATCACAGTTTCCCT
TGAAGAAACGACAAGCATCCATAACCAAATTCGACATCTTCACAAAGACA
CAAAAGATTTGCAAGGCAGCGAAGAGCTACAAGATCAAGCCGCCAAATGT
GCAATGTCAATCTTAGATCAAGACGAGGATCCTTGTAAAGAACAAAGTAC
ATTTGGCATCAATATGGGTCACTATAAGAAATTCTTGAATGCAACTTCCC
TGAAAACAACGATAGTTCATTGCATGTTGCATGGGAATACAAACTCAAAA
AGGCGTCAACATTCCTGGGAATGGTACCGTTAAAAATTCTCTCCATTTTA
GCAACTGCAGGAGGTTGCAAAGACTACCACGGCCTCTGCAAACAAATACC
AGTCTACAATGAGGCGTTACGAGAAGCAACATGTGACTTGGCTGCACATC
GAAGCAAAGTCAGAGATTGGTGCCCTAAAGCGTGTGGAGCTTGTTGAATT
ATTTGGAAAGGAACCACTCATGTCGGATGTGGAGGTGCCACCAAAGCCGG
AATCCCACCAGCCAGCGTCTTCGTTTGTTTATACAACCCTGCAGGGAATA
AAATGAATACTGTGTCTTCAATGGACCTCATCAAGAATCTGGGAGCAAAG
AAACATCCTAATAAACATATCCTTCATGATAATGGTACCATGAGTTGAGG
AGAGTGAATTTCACCAGTGATGATTGGGCCCTAAAGATGGCCAATGATTT
CTCAAAATATGCCAATGGATCACAGTTTCCCTTGAAGAAACGACAAGCAT
CCATAACCAAATTCGACATCTTCACAAAGACACAAAAGATTTGCAAGGCA
GCGAAGAGCTACAAGATCAAGCCGCCAAATGTGCAATGTCAATCTTAGAT
CAAGACGAGGATCCTTGTAAAGAACAAAGTACATTTGGCATCAATATGGG
TCACTATAAGAAATTCTTGAATGCAACTTCCCTGAAAACAACGATAGTTC
ATTGCATGTTGCATGGGAATACAAACTCAAAAAGGCGTCAACATTCCTGG
GAATGGTACCGTTAAAAATTCTCTCCATTTTAGCAACTGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007865XLOC_007865Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014055-proteinTCONS_00014055-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014055-exon-sc0000180-1575043694:75917..76059TCONS_00014055-exon-sc0000180-1575043694:75917..76059Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1575043694:75708..75755TCONS_00014055-exon-sc0000180-1575043694:75708..75755Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1575043694:74561..74789TCONS_00014055-exon-sc0000180-1575043694:74561..74789Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1575043694:73556..73646TCONS_00014055-exon-sc0000180-1575043694:73556..73646Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1575043694:69226..69412TCONS_00014055-exon-sc0000180-1575043694:69226..69412Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1575043694:68090..68416TCONS_00014055-exon-sc0000180-1575043694:68090..68416Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:75917..76059TCONS_00014055-exon-sc0000180-1510915933:75917..76059Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:75708..75755TCONS_00014055-exon-sc0000180-1510915933:75708..75755Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:74561..74789TCONS_00014055-exon-sc0000180-1510915933:74561..74789Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:73556..73646TCONS_00014055-exon-sc0000180-1510915933:73556..73646Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:69226..69412TCONS_00014055-exon-sc0000180-1510915933:69226..69412Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1510915933:68090..68416TCONS_00014055-exon-sc0000180-1510915933:68090..68416Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:75917..76059TCONS_00014055-exon-sc0000180-1491911889:75917..76059Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:75708..75755TCONS_00014055-exon-sc0000180-1491911889:75708..75755Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:74561..74789TCONS_00014055-exon-sc0000180-1491911889:74561..74789Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:73556..73646TCONS_00014055-exon-sc0000180-1491911889:73556..73646Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:69226..69412TCONS_00014055-exon-sc0000180-1491911889:69226..69412Clytia hemisphaericaexon
TCONS_00014055-exon-sc0000180-1491911889:68090..68416TCONS_00014055-exon-sc0000180-1491911889:68090..68416Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:68090..76059 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0869553	0.0423975	0	0	0.234528	0.231659	0.794985	0.732626	0.769393	0.453818	0.792876	0.409219	23.5479	24.7781	0	0.0266369	3.3973	4.04131	71.575	69.6965	12.5754	12.6136	4.15412	5.44854	7.40557	7.24898	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014044CAP_domain
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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