TCONS_00014006 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014006
Unique NameTCONS_00014006
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014006 ID=TCONS_00014006|Name=TCONS_00014006|organism=Clytia hemisphaerica|type=transcript|length=303bp
TTCTCGACTTTGGAATTGGTCTATataaaaagtgaccccattttcgaaCA
CTACTCATCAAGAGCTATCGGATGAAGGTATTACTTTTACGCTATTTCGA
AGTTTtctttccttcaaaattttgatgacgtcatttttcggtcacgtgaa
aaatttttttcaaatttttttggaaaactgtTTCAAAGGTTGATATGGTA
AAAGAAATGTTGTGTAGTCTATATAACAATCAAAAAACACCCTTGTTCAA
CAAGGTTGCTCAGCAAGTGGGAGAAAAACAGCCAAAAATGACCACCGTGA
AAC
Run BLAST on NCBI

transcript from alignment at sc0000175:13469..13771

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014006 ID=TCONS_00014006|Name=TCONS_00014006|organism=Clytia hemisphaerica|type=transcript|length=303bp|location=Sequence derived from alignment at sc0000175:13469..13771 (Clytia hemisphaerica)
GTTTCACGGTGGTCATTTTTGGCTGTTTTTCTCCCACTTGCTGAGCAACC
TTGTTGAACAAGGGTGTTTTTTGATTGTTATATAGACTACACAACATTTC
TTTTACCATATCAACCTTTGAAacagttttccaaaaaaatttgaaaaaaa
tttttcacgtgaccgaaaaatgacgtcatcaaaattttgaaggaaagaAA
ACTTCGAAATAGCGTAAAAGTAATACCTTCATCCGATAGCTCTTGATGAG
TAGTGttcgaaaatggggtcactttttatATAGACCAATTCCAAAGTCGA
GAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007825XLOC_007825Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014006-exon-sc0000175-1491911889:13469..13771TCONS_00014006-exon-sc0000175-1491911889:13469..13771Clytia hemisphaericaexon
TCONS_00014006-exon-sc0000175-1510915933:13469..13771TCONS_00014006-exon-sc0000175-1510915933:13469..13771Clytia hemisphaericaexon
TCONS_00014006-exon-sc0000175-1575043694:13469..13771TCONS_00014006-exon-sc0000175-1575043694:13469..13771Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175supercontigsc0000175:13469..13771 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.401801	0.969513	1.81529	0.317732	0	0.764003	2.26001	3.76146	3.38547	1.71281	1.83811	0.28305	0.290117	1.20244	0	2.18732	2.66724	0.864635	1.57216	1.61928	1.80647	0.517009	0	2.92947	4.69019
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014006 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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