TCONS_00013876 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013876
Unique NameTCONS_00013876
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2014

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013876 ID=TCONS_00013876|Name=TCONS_00013876|organism=Clytia hemisphaerica|type=transcript|length=2014bp
taGATTCTGAAATTACTAACACTTCTTAAGAAAGCACATTGGAAGAACCA
TCCAAACCAAAGAACAATGGCTAGCCAAGGAAATGAACAGCTCATCGCGG
GCAATAAACGAACTTACTCTGTCAACCCTAAGAGTTTTCGAAAAGGATTG
ATCATGGAACCCAAATGGCGGATTATCTCACTCTCCCTAATGGCAGTCAC
TCTTGTTCTCCTTGTGGCGGCCACCATGTCCACCAATTGGCGGGAGGATC
ATGAAGGGCGTATTGATGTTTTCATAACACACGGATTGTGGAGAATTTGT
AGGGATATCAAATTCGGTGCAACCTTGGATCATAAATGCATGGCCTCACT
TGCTAACAATGCTCCCGACTGGTTCCAAACTGTACGCGCTTTCATGTTAT
TGACTTGTCTCGTTGTGTTGATTGCTTTTGCATACGCCGTCAAATTGATC
TATCAATTACCTGTTATCAAGCACAGAAACCAAAAAGCATCCGTATCGCT
TGCTTTACCAGCAATCTTGATGTTTGTAGCAGCTGTGACTGGTTTGATTG
GTGTCACCACATTCTCTGTCGCCACTCATATGGATCAAGGCTTGTATTTC
CCAGAATCCCTCCCACCAACTTGGGGTAACAGTTGGGCTATGGTCTGGGC
AAAACGAAACAGTTTACCATCTGACCGCCCTGAAGAAAAAGCCATGGAAA
TGACATACGGTTATTCATACGCCCTTGGATGGTTAGGCGTTCTTTCAACC
ACCGCCTCCTTTGTTGTCAATTTAGTTGCCAGCGGTAAACAGTAAACAAA
AAACATGACGACTTTGTCTAAATACACCATATGTTATATTTGGATTGTAA
TTGTTAAAAGAAGGTACCTGTCAGGAAAGATATACTCCGAACCCTGGCAC
TATTAAAACTGGTGCAAGGAATGAAGAGCAAAAACTATTTAGCTCCTTCA
TAATGTTTTGATAAATAAACATTACTACGGTATATCAATGAACGAAGTTT
TGAGCAGACCTCTGAGTAATCATTAAGGCCGTCagaatttttaacataat
taacAGCAGGGGCTATGCTTTGAAAACAGagtttaaatgaaaattgcatt
ttcatttgcatttttattttaaagcatcttgatatttttttcatcaagAA
TGAGAAAGGGTTCAAAGAATTTAAATCGAAAATTGTTTTGCTTATAAGTC
TAATATCAGTAACGGCTAAAAACAAATAATTGTCTGTTAGAtgatttaaa
aaagtatttttttatgtGCATACCTTTTACTACTATAATTTAATTATAAT
CATTTTATGAAATAGTGATTCCAATCGATCGGTATGTTATTTAGGTTTAA
AATTCTTTTTAGGggataataaatttattttgtagttttttttcaCATCT
GTCTTTAGGGAACTGTTGATTCTTTCTCAGGAGAGCGCCATGGTATTTTC
GAGGAATTTATATCTAGTCTTTAGAGGGTAttgggctttttcagaaaaaa
actgtaTATCCCCTTTAGAGGAAGTCCATTTCCGTTCTAAGGGGGGTATG
TCTTGGAATTCCATTGGgatatacaaaaatctgtcaaagtAGTTGGAATT
TCATGGAGGTAACTAATATTATAAATCCTacaaaaattcggaattccaaa
GGGGTTTAAACATAAAACTGCCTGGAATTCCAACATTTCCATCAACAAAA
GTTTGggcctcctcaacagggggtatacgtttTTTCCTGAAAAGCCCATT
CTACAAAGGTTCACCCTAAAGAATCTTCGGGGACTAATTTTTACTAAACT
AAGCTTTTTATTTAGTGACACAACTATCGTTTTCTTAATtcgtaattatt
ttttttttctaagaaatccaaacccaaaaaacttttaataattaatattt
gtatttataaataaaattgatgatttttattgatttgtAATAATTGTGTT
TATAGATGTTCTATCAAAGATTTTCACTTTCAATTGAGAATAACTAAAAA
TTATATGTctcaaa
Run BLAST on NCBI

protein sequence of TCONS_00013876-protein

>TCONS_00013876-protein ID=TCONS_00013876-protein|Name=TCONS_00013876-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MASQGNEQLIAGNKRTYSVNPKSFRKGLIMEPKWRIISLSLMAVTLVLLV
AATMSTNWREDHEGRIDVFITHGLWRICRDIKFGATLDHKCMASLANNAP
DWFQTVRAFMLLTCLVVLIAFAYAVKLIYQLPVIKHRNQKASVSLALPAI
LMFVAAVTGLIGVTTFSVATHMDQGLYFPESLPPTWGNSWAMVWAKRNSL
PSDRPEEKAMEMTYGYSYALGWLGVLSTTASFVVNLVASGKQ
Run BLAST on NCBI

transcript from alignment at sc0000174:232561..238640-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013876 ID=TCONS_00013876|Name=TCONS_00013876|organism=Clytia hemisphaerica|type=transcript|length=6080bp|location=Sequence derived from alignment at sc0000174:232561..238640- (Clytia hemisphaerica)
TAGATTCTGAAATTACTAACACTTCTTAAGAAAGCACATTGGAAGAACCA
TCCAAACCAAAGAACAATGGCTAGCCAAGGAAATGAACAGCTCATCGCGG
GCAATAAACGAACTTACTCTGTCAACCCTAAGAGTTTTCGAAAAGGTAAA
ATTGAATTTGGATCCAAGGACACTATATCATACATATGAATATTATTCAT
GATATTCATGACGTAATGTTTTCTACGGAAAGACCCTGTTTTTGTATAGT
TTAAATTTGAATTGAGAAGGTTCGTCCACCCCCCTGTATGGAAACTTTAT
GGAACTGCCAGCGCATTGGGTTTTGTTTTTAAGGAAATTTGAAGAATTTT
TAAAGACTTTTCTAAAAAAACCTATGCTATGACTGAGCTAATGTTTTATT
TCAATTTTGTTTTTCAATTGAAGGTACACTGCTCAAAATATTACATTTTG
TTTATACACCTTTTCTACCGTAGCCGCCAATTATTGCCGCGCGGGCATTT
TTTGTCCGTTCTACCACCCTAAAATTAAACTGTCCTAGTATTTTTTTCGC
ACCTATAGCTAATAGAAAAAGGTGTAAAAAAAGGATTGTATCGAGTTCAG
GGGGACAAATCAATAATAAAGTGGCACACGCCTGACTGCGCGAATACGGT
CGAAAAGGTGTATTGAATGCTGTTTCTTTTAATGCTTATCATGTAGATCA
TCTCGTTGGTGACTTACTAATGAAAAAACTACATAGCTTTGTCGGTTCTT
TACTCATCACACCACTCATGTTATTAATGACAATTTAATTAGTTTTTTAA
TGACCCTTTTTATAACATCATCTTTGTTTTGTGTAGGTTGGTTGAAAAGC
ATATAGTGTATTTTTGGCAGTTTTAATCTTCGTGCGATAATGTTACTTTT
CACTAATTGCAAGATTTTGTAATTTCTCGACCACAATCATTGCAACAGAA
CAAAGTCATATAATGTTAACTTTTGCCTTTATGCCTTATCAAAATGGATA
AAACGCATATGTACCTAAATTATTTTGAACAAAGATCGTTAACTCCCTGG
ATATCCGATATCCTCAACAGGGGGAGGGAGGACTATTTCTGGAAAAAGCC
CAATGCTACTACTCAAATGAACAGGATTTCTCCAACCTTTTTCTTAGATT
CTCAAAACAAACACACGTGTGATGAAGATAGCCTTATATTGCTCAAAATG
GGTGGGGGGGTTAAATGTAGAAAACATACACGCTGAAGCTCTGGAGGTTG
GAAAATTTTTCGAAGGTTTAGATTACGGAATTTTGCAAGATCGCGTCAAG
GATTTTGCAGTGGGAGGTCTGGTAACCCAGTCCTCGTTTTTAGGGATTAG
CGAGTCCAACCGAAAATTTTTTAGCTTTACGCGCAAGGGCAGTTGAACCC
GACTAGGGATGCAGCATATCAAAGGTCGACTATCATTCCTCTCCGATGGG
AAATTGGCCCGCTCCTTTATAGCTTTAGCGTGGACGGCAGCCAATCCGAA
ATTTGAATATCAGATAAAAGCTCCTCACAAGGAAGGGCGGATAGAAAAAA
AATTCTCCACCATAAATTTTCTTGGATCAAGAACATGTAAAAAGTATTAC
GGTAGCAGACGGCTTAGAGGGAAAGAACGCCTTATCAACCCCGGTTGGCT
TTCCAGGTGACTGGTAACGAATTCTATCGGCGCGCGGCATTTCTAGACTG
TCACTAAAGCAAATCACGCTAATTTCCGCCGAAACTCTACTCTATATGAG
AGATTTTCTTTGAATCTCGGAGGTAGAGTTCAAGCTTTTTTAAGTATCAA
AATAGTTTAACTGAATTGACGTTCGTTACCAGTTTCCTAAAAACCTAATC
AGGCCGCTAAAAGTTGATACATGTACATGTATTTTTTTAATAAGTGTCAG
TAGCGTAGAATTTTGGAGCTTTTATGACACAGTAATTATGTTGTTATATT
ATGAATAGATAATTACAGTGTCATAAAAATCTGCTCTCCTACACAAATTT
TGTGTCCCTCCTGTCTAAGCTACTGAGTGTCTACCCTATACCAGGCTCAC
GTTATACTTACCATGCTATTGTCCTTAAACAATAGAGCCATTTTTTTGGT
ACGAAACACTGAGCCTGTAGTACTTATAAACGCTATGCTTTTAAAAAACA
TAAGTGTATACATAACATTAAAAGAAAACGTAAAATATAAAAGCAGCAAA
TTTATAGAACAAAAAAACTTTAGAACATTACATTAAAGATGTATTTTTTT
CTGTTATTCGAGCACTTATTTATCATTAAACATTTCTTTACTTTTCATTA
GGATTGATCATGGAACCCAAATGGCGGATTATCTCACTCTCCCTAATGGC
AGTCACTCTTGTTCTCCTTGTGGCGGCCACCATGTCCACCAATTGGCGGG
AGGATCATGAAGGGCGTATTGATGTTTTCATAACACACGGATTGTGGAGA
ATTTGTAGGGATATCAAATTCGGTGCAACCTTGGATCATAAATGCATGGC
CTCACTTGCTAACAATGCTCCCGGTTAGTTGTTTTTAACGATGAACCAAA
AGCCTCAATAGACATTTTCATGAATTATGTCACGACCATCACTTTCCTCG
TATTCAAACAATTGCCATGGTGATTATGTCCCTTGATACATTAAATGATT
TTTATGAATAGAAAGTAGTTTTAATAAAATCAGCTGGGAGTTAATCACCA
TGGCAATAATTTCAAAAGTGATGTCCGTGGTGTAATTTATGAAAAGGTTT
ATTGCAGAGTGGACTGGTGTTTTAAGTGAATTTCTTGATGTCACTAAAAC
TGAAGAATTTACAGGAAATTAAGTTAGATTTAACTCCATCGTGTGTAGCC
CCAGCTTGAAGGTATTTATTGTATCATTTCTTCCTGTTTTTCAACAGAAT
TCTTTCGAACTGATTTTCCACAGTTCAAAGCTACGTCGAAAAATATTTGG
TAGACCAAAAATACAGGTCGATGCAATTTCGATATTTTCTTAATACACAT
TTTCGACTGTAGCCGCCAATTGCCGCGCGGGAATTTTTTGTCCGTTTTAC
CACCCTAAAACCGTCCCAATCTTTTTTTCGCACCTATAGACAATAGAAAA
AGGTGTAAAGAAAGGATTGGATCTAGTTTAGAGGGATAATTAGAAAATAA
AGTGGCATCTGCCCTGACTACGGTCGAATAGGTGTATAAAAGCAAATTCT
TGGAAATCAACCTTCGCAATGAATTATAAAAAAATTAAAAAATTATAAAT
AGAACAAAAAAGTTTGGGTAACGACCAATATATATATATCTATCTTCTTT
TGTGTTTAGTTAAAATAATTATCATAATATATATAGGTCACTTTATGCTT
TCTATTTTTAGATAGATACGAGATTTTACCATGAATCACTGTATAATTTC
GTCATTTTTGTTTACAGACTGGTTCCAAACTGTACGCGCTTTCATGTTAT
TGACTTGTCTCGTTGTGTTGATTGCTTTTGCATACGCCGTCAAATTGATC
TATCAATTACCTGTTATCAAGCACAGAAACCAAAAAGCATCCGTATCGCT
TGCTTTACCAGCAATCTTGATGTTTGTAGCAGGTAAGGTCTTTTTTGTTT
TGTTTTTCAATTCAAAAATCTTTCAGGCGTCTGCAAAATGTTGATGTAGA
GTATTGGGGATGAGAGCTCTGTGTAGTTTTTCAACAGGAAACAGGGTTTT
TGAACCATGATCAACTTCTGGCCAACTTCTCATCGAGGGGGGAGGGGGGT
GGTTAGTCCAACAATGTCCTACCAACGCCAAGACAGATTTTTACTCTTCT
CGTCGTCCTGCTCACAAATTTGTTTTCCTGTTGTTTTGATCTAAGGGACT
TTAATCTGTTTTATTTTGGTTATGCCTAGATATCATGTAACTCATATAAA
GTTTTACTGGACATTACCCAACCTTTTGTTTATACTCTCGGGTACCTAAT
TGCCAGAGGCCCCGCTAATTAGCCTTCTTTTCGAAAACTTTCCACCCAGG
ACAATTTTATTCCAACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGCTTAT
TAATTTTTGAGATTTTTTCCAACCCCCCTGCTTATTCCGAACCCTATTAT
TAACCCGGCTATTAGGTACCCGAGAGTACTTAGATGATAAAGATATATCA
TGTATTTCATATATACAGTTTTACTGGGCATTACCCAACCTTAGGGTTTT
AATTGCGTTTTTCTGATAATGTTTTATATTTACTTCATTTTAGCTGTGAC
TGGTTTGATTGGTGTCACCACATTCTCTGTCGCCACTCATATGGATCAAG
GCTTGTATTTCCCAGAATCCCTCCCACCAACTTGGGGTAACAGTTGGGCT
ATGGTGAGTATATACAATTCAATTTTACAAGTGATCTAACTGAGAATTAA
GATAAATCTTAGCTATTCAAATTTCAGAAATATTTTAGAAAATATCGTAT
TGTCTTACTGATTTGAACTTCTGCTATTCGAAATTCCCCTGATATGTGAT
CAAATTAGATTTTAAGTTCGATCTCGACAATATCTATAGTTAACATGCAG
CTCTGCAAAGTATTTGTTTCAATTCTTTAAAACATTCTATTTTTTCCATT
TTCAATAGGTCTGGGCAAAACGAAACAGTTTACCATCTGACCGCCCTGAA
GAAAAAGCCATGGAAATGACATACGGTTATTCATACGCCCTTGGATGGTT
AGGCGTTCTTTCAACCACCGCCTCCTTTGTTGTCAATTTAGTTGCCAGCG
GTAAACAGTAAACAAAAAACATGACGACTTTGTCTAAATACACCATATGT
TATATTTGGATTGTAATTGTTAAAAGAAGGTACCTGTCAGGAAAGATATA
CTCCGAACCCTGGCACTATTAAAACTGGTGCAAGGAATGAAGAGCAAAAA
CTATTTAGCTCCTTCATAATGTTTTGATAAATAAACATTACTACGGTATA
TCAATGAACGAAGTTTTGAGCAGACCTCTGAGTAATCATTAAGGCCGTCA
GAATTTTTAACATAATTAACAGCAGGGGCTATGCTTTGAAAACAGAGTTT
AAATGAAAATTGCATTTTCATTTGCATTTTTATTTTAAAGCATCTTGATA
TTTTTTTCATCAAGAATGAGAAAGGGTTCAAAGAATTTAAATCGAAAATT
GTTTTGCTTATAAGTCTAATATCAGTAACGGCTAAAAACAAATAATTGTC
TGTTAGATGATTTAAAAAAGTATTTTTTTATGTGCATACCTTTTACTACT
ATAATTTAATTATAATCATTTTATGAAATAGTGATTCCAATCGATCGGTA
TGTTATTTAGGTTTAAAATTCTTTTTAGGGGATAATAAATTTATTTTGTA
GTTTTTTTTCACATCTGTCTTTAGGGAACTGTTGATTCTTTCTCAGGAGA
GCGCCATGGTATTTTCGAGGAATTTATATCTAGTCTTTAGAGGGTATTGG
GCTTTTTCAGAAAAAAACTGTATATCCCCTTTAGAGGAAGTCCATTTCCG
TTCTAAGGGGGGTATGTCTTGGAATTCCATTGGGATATACAAAAATCTGT
CAAAGTAGTTGGAATTTCATGGAGGTAACTAATATTATAAATCCTACAAA
AATTCGGAATTCCAAAGGGGTTTAAACATAAAACTGCCTGGAATTCCAAC
ATTTCCATCAACAAAAGTTTGGGCCTCCTCAACAGGGGGTATACGTTTTT
TCCTGAAAAGCCCATTCTACAAAGGTTCACCCTAAAGAATCTTCGGGGAC
TAATTTTTACTAAACTAAGCTTTTTATTTAGTGACACAACTATCGTTTTC
TTAATTCGTAATTATTTTTTTTTTCTAAGAAATCCAAACCCAAAAAACTT
TTAATAATTAATATTTGTATTTATAAATAAAATTGATGATTTTTATTGAT
TTGTAATAATTGTGTTTATAGATGTTCTATCAAAGATTTTCACTTTCAAT
TGAGAATAACTAAAAATTATATGTCTCAAA

Coding sequence (CDS) from alignment at sc0000174:232561..238640-

>TCONS_00013876 ID=TCONS_00013876|Name=TCONS_00013876|organism=Clytia hemisphaerica|type=CDS|length=3645bp|location=Sequence derived from alignment at sc0000174:232561..238640- (Clytia hemisphaerica)
GTCTGGGCAAAACGAAACAGTTTACCATCTGACCGCCCTGAAGAAAAAGC
CATGGAAATGACATACGGTTATTCATACGCCCTTGGATGGTTAGGCGTTC
TTTCAACCACCGCCTCCTTTGTTGTCAATTTAGTTGCCAGCGGTAAACAG
TAACTGTGACTGGTTTGATTGGTGTCACCACATTCTCTGTCGCCACTCAT
ATGGATCAAGGCTTGTATTTCCCAGAATCCCTCCCACCAACTTGGGGTAA
CAGTTGGGCTATGACTGGTTCCAAACTGTACGCGCTTTCATGTTATTGAC
TTGTCTCGTTGTGTTGATTGCTTTTGCATACGCCGTCAAATTGATCTATC
AATTACCTGTTATCAAGCACAGAAACCAAAAAGCATCCGTATCGCTTGCT
TTACCAGCAATCTTGATGTTTGTAGCAGGATTGATCATGGAACCCAAATG
GCGGATTATCTCACTCTCCCTAATGGCAGTCACTCTTGTTCTCCTTGTGG
CGGCCACCATGTCCACCAATTGGCGGGAGGATCATGAAGGGCGTATTGAT
GTTTTCATAACACACGGATTGTGGAGAATTTGTAGGGATATCAAATTCGG
TGCAACCTTGGATCATAAATGCATGGCCTCACTTGCTAACAATGCTCCCG
ATGGCTAGCCAAGGAAATGAACAGCTCATCGCGGGCAATAAACGAACTTA
CTCTGTCAACCCTAAGAGTTTTCGAAAAGGTCTGGGCAAAACGAAACAGT
TTACCATCTGACCGCCCTGAAGAAAAAGCCATGGAAATGACATACGGTTA
TTCATACGCCCTTGGATGGTTAGGCGTTCTTTCAACCACCGCCTCCTTTG
TTGTCAATTTAGTTGCCAGCGGTAAACAGTAACTGTGACTGGTTTGATTG
GTGTCACCACATTCTCTGTCGCCACTCATATGGATCAAGGCTTGTATTTC
CCAGAATCCCTCCCACCAACTTGGGGTAACAGTTGGGCTATGACTGGTTC
CAAACTGTACGCGCTTTCATGTTATTGACTTGTCTCGTTGTGTTGATTGC
TTTTGCATACGCCGTCAAATTGATCTATCAATTACCTGTTATCAAGCACA
GAAACCAAAAAGCATCCGTATCGCTTGCTTTACCAGCAATCTTGATGTTT
GTAGCAGGATTGATCATGGAACCCAAATGGCGGATTATCTCACTCTCCCT
AATGGCAGTCACTCTTGTTCTCCTTGTGGCGGCCACCATGTCCACCAATT
GGCGGGAGGATCATGAAGGGCGTATTGATGTTTTCATAACACACGGATTG
TGGAGAATTTGTAGGGATATCAAATTCGGTGCAACCTTGGATCATAAATG
CATGGCCTCACTTGCTAACAATGCTCCCGATGGCTAGCCAAGGAAATGAA
CAGCTCATCGCGGGCAATAAACGAACTTACTCTGTCAACCCTAAGAGTTT
TCGAAAAGGTCTGGGCAAAACGAAACAGTTTACCATCTGACCGCCCTGAA
GAAAAAGCCATGGAAATGACATACGGTTATTCATACGCCCTTGGATGGTT
AGGCGTTCTTTCAACCACCGCCTCCTTTGTTGTCAATTTAGTTGCCAGCG
GTAAACAGTAACTGTGACTGGTTTGATTGGTGTCACCACATTCTCTGTCG
CCACTCATATGGATCAAGGCTTGTATTTCCCAGAATCCCTCCCACCAACT
TGGGGTAACAGTTGGGCTATGACTGGTTCCAAACTGTACGCGCTTTCATG
TTATTGACTTGTCTCGTTGTGTTGATTGCTTTTGCATACGCCGTCAAATT
GATCTATCAATTACCTGTTATCAAGCACAGAAACCAAAAAGCATCCGTAT
CGCTTGCTTTACCAGCAATCTTGATGTTTGTAGCAGGATTGATCATGGAA
CCCAAATGGCGGATTATCTCACTCTCCCTAATGGCAGTCACTCTTGTTCT
CCTTGTGGCGGCCACCATGTCCACCAATTGGCGGGAGGATCATGAAGGGC
GTATTGATGTTTTCATAACACACGGATTGTGGAGAATTTGTAGGGATATC
AAATTCGGTGCAACCTTGGATCATAAATGCATGGCCTCACTTGCTAACAA
TGCTCCCGATGGCTAGCCAAGGAAATGAACAGCTCATCGCGGGCAATAAA
CGAACTTACTCTGTCAACCCTAAGAGTTTTCGAAAAGGTCTGGGCAAAAC
GAAACAGTTTACCATCTGACCGCCCTGAAGAAAAAGCCATGGAAATGACA
TACGGTTATTCATACGCCCTTGGATGGTTAGGCGTTCTTTCAACCACCGC
CTCCTTTGTTGTCAATTTAGTTGCCAGCGGTAAACAGTAACTGTGACTGG
TTTGATTGGTGTCACCACATTCTCTGTCGCCACTCATATGGATCAAGGCT
TGTATTTCCCAGAATCCCTCCCACCAACTTGGGGTAACAGTTGGGCTATG
ACTGGTTCCAAACTGTACGCGCTTTCATGTTATTGACTTGTCTCGTTGTG
TTGATTGCTTTTGCATACGCCGTCAAATTGATCTATCAATTACCTGTTAT
CAAGCACAGAAACCAAAAAGCATCCGTATCGCTTGCTTTACCAGCAATCT
TGATGTTTGTAGCAGGATTGATCATGGAACCCAAATGGCGGATTATCTCA
CTCTCCCTAATGGCAGTCACTCTTGTTCTCCTTGTGGCGGCCACCATGTC
CACCAATTGGCGGGAGGATCATGAAGGGCGTATTGATGTTTTCATAACAC
ACGGATTGTGGAGAATTTGTAGGGATATCAAATTCGGTGCAACCTTGGAT
CATAAATGCATGGCCTCACTTGCTAACAATGCTCCCGATGGCTAGCCAAG
GAAATGAACAGCTCATCGCGGGCAATAAACGAACTTACTCTGTCAACCCT
AAGAGTTTTCGAAAAGGTCTGGGCAAAACGAAACAGTTTACCATCTGACC
GCCCTGAAGAAAAAGCCATGGAAATGACATACGGTTATTCATACGCCCTT
GGATGGTTAGGCGTTCTTTCAACCACCGCCTCCTTTGTTGTCAATTTAGT
TGCCAGCGGTAAACAGTAACTGTGACTGGTTTGATTGGTGTCACCACATT
CTCTGTCGCCACTCATATGGATCAAGGCTTGTATTTCCCAGAATCCCTCC
CACCAACTTGGGGTAACAGTTGGGCTATGACTGGTTCCAAACTGTACGCG
CTTTCATGTTATTGACTTGTCTCGTTGTGTTGATTGCTTTTGCATACGCC
GTCAAATTGATCTATCAATTACCTGTTATCAAGCACAGAAACCAAAAAGC
ATCCGTATCGCTTGCTTTACCAGCAATCTTGATGTTTGTAGCAGGATTGA
TCATGGAACCCAAATGGCGGATTATCTCACTCTCCCTAATGGCAGTCACT
CTTGTTCTCCTTGTGGCGGCCACCATGTCCACCAATTGGCGGGAGGATCA
TGAAGGGCGTATTGATGTTTTCATAACACACGGATTGTGGAGAATTTGTA
GGGATATCAAATTCGGTGCAACCTTGGATCATAAATGCATGGCCTCACTT
GCTAACAATGCTCCCGATGGCTAGCCAAGGAAATGAACAGCTCATCGCGG
GCAATAAACGAACTTACTCTGTCAACCCTAAGAGTTTTCGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007748XLOC_007748Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013876-exon-sc0000174-1575043694:238496..238640TCONS_00013876-exon-sc0000174-1575043694:238496..238640Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1575043694:236118..236339TCONS_00013876-exon-sc0000174-1575043694:236118..236339Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1575043694:235059..235223TCONS_00013876-exon-sc0000174-1575043694:235059..235223Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1575043694:234188..234297TCONS_00013876-exon-sc0000174-1575043694:234188..234297Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1575043694:232561..233932TCONS_00013876-exon-sc0000174-1575043694:232561..233932Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1510915933:238496..238640TCONS_00013876-exon-sc0000174-1510915933:238496..238640Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1510915933:236118..236339TCONS_00013876-exon-sc0000174-1510915933:236118..236339Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1510915933:235059..235223TCONS_00013876-exon-sc0000174-1510915933:235059..235223Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1510915933:234188..234297TCONS_00013876-exon-sc0000174-1510915933:234188..234297Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1510915933:232561..233932TCONS_00013876-exon-sc0000174-1510915933:232561..233932Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1491911889:238496..238640TCONS_00013876-exon-sc0000174-1491911889:238496..238640Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1491911889:236118..236339TCONS_00013876-exon-sc0000174-1491911889:236118..236339Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1491911889:235059..235223TCONS_00013876-exon-sc0000174-1491911889:235059..235223Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1491911889:234188..234297TCONS_00013876-exon-sc0000174-1491911889:234188..234297Clytia hemisphaericaexon
TCONS_00013876-exon-sc0000174-1491911889:232561..233932TCONS_00013876-exon-sc0000174-1491911889:232561..233932Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013876-proteinTCONS_00013876-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:232561..238640 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.406906	0.594137	0	0.642911	6.85501	5.71939	7.78808	19.2295	28.4984	36.2507	24.0727	21.4966	70.9806	66.7259	32.3573	22.0135	47.1792	48.9883	60.8892	79.8376	57.452	49.1609	15.7857	22.3362	52.1931	54.3632	38.5462	37.6721	5.26186	4.25909
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004031PMP22/EMP/MP20/Claudin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013876 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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