|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013797 ID=TCONS_00013797|Name=TCONS_00013797|organism=Clytia hemisphaerica|type=transcript|length=4169bp
ggctAAGAAACTATCTATAGTTAAAAAggacaaaaactaaaaaaattcaa
CACAAAAGGGACCAGACTTTATACAATTTTACAATAACATAAAAACGTCA
GTTAGCAGTGGAATATGTAATCTGCAAACTCTGATAATATTTtggattgt
ttttatttggtttCATTGAATGGAATGCAAAAATCATTTGAATTGGTCAT
CAGTGtagattgaatttcaaaaacgcatttcttttaagaaatttCATTTA
CATACACATGTATTCTAAGTCCCCTAAACACAAACAATTTTATCATATCT
GATTTAAAACCGAGCTTTATAGAACCATAATCGAACAAGGAGACCCAAAA
ATATATACTGTTTTCCATAAagtataaaaacatttaaatattATGTTTGT
ATAGCATGCGGTGCTCTATGTGAACTGAACGGCATAGCACCTGTGGTCTG
TTGGCTCTGATGATCAGTTGTGTCCTTATAGCCCGCAGGTCGCGGAACGT
CGTAAATCTTTTCTGGTGGTACTTGGTATTGGTGGTCTAAAGCAGCGTCC
GCGCTACGTGCAGGCGGTAAGAAATCATACGCCTGACTTGCACTTTCGAA
TGTCTGTGAAGGTTGAGGAGGTAGAGGGGAGGTCGGTTTTATGAAACTAC
TTCTCGGAGGAATCGGTCTTTCTAACATTGCATTTGTGTTCGTTCTCGGT
AATACGTCGTAAAGAGTCGTCGGGTCGGTTTCCGACGAAAAGGCACTGTC
GGTTGTGTATCGTCGGCGAGCTAGAGGGTCGTCCTCCTCGTGAAAGGAAC
GTCCTCCACCAGTTGAATTCGTAGACGCCGATGATCTTGTATTCGGTAAA
ACATCGTATAACGGACTACCTGTGTGCCTCGGCTCGTCATCCGTAGCGAT
AGACGAGTACGGCGTACTAGCTTCGTTCGACGACCGTGGCTCTAACCGAT
GCTCGCAAAACGTGTTCCGTAAATCTTGGAGAATATGTGAATCAGTGTTT
CGACGTTCCGCGTAAAATTCGTCTTCTTGTTGTTCAAAGTCCATCTcttc
taatttctttttttcacgtTCTATATTACGTTGTAAACTATAGAATTTAC
GGTCTTGATTATTCGGATGTAACTTTGCTTTACTCCCTTTGTCgttcttt
ttctgtttttgctCTCCTCCTGTTGGATGCACCTGACTGTTTTTACGCCC
TCCACCGTTCGCCGTATTCCCGTTCTCTCCCGCACTACCGTTCATGTCGT
TCGAACTTATTTTACGTGATATTTTAcgcttattttcttgttttatttGA
CCGTTCGTGACACCCGTCTCTTGTAAGTGCACTCCACCGTCAACGCTCCC
GTTCATATCATTTAACGGCCGTTCTTCGTCACTCTTTCCCGCAGAGTTTT
TATGACGTACACGAAACTTTTTGCTTTTACACATCGCCTTGAGTCTCTCT
TTACGCGTACACATGCAATACGTTATCAAtataatcaataaaaacacgGC
GACGGCAGCGCACGCAATCAACGCCGTAAACACGCCGTCAAAAATAGTTT
CCTCCAAAACAACACGTCCCACGCTCCACGAACTGTAATTCGAGTTTAAA
ACGTTCCGTACTTTTAACGTATATCGTTTACGTAGAAAATCTATACCGCA
TGTCTCGATGACGTTACTCGACGTATCCATACGTTTAACAactgcctcgt
tttcaaaaacttcaacCTGGTATGAAAGTGAGGCTACAATACAGGACCCG
ATATTAGGACCATCCCAACGCACATGCGCACAATTGTCTTGACTCATCAA
ACTTATAATGACATTCTCAGGGGGTTTTGGTTTCAATCCCATCTGGAGAC
TAACACTTCTACGTAGAGTCTGTACTGCTCCCTCGTATATGAGGTCTACG
GTTTTTCCGCAGAATTTCTGTTCTGTAAATGACGTAACGTTCTTCAAAGT
AAACATGTAACATCCGTCAATATTTGTTCTCACGCCTTTGACTTTTTGGG
TTTTCCCTTGAAATATCATTGTCACTTTGGGTTTTGGTTTTCCACAGAGC
TCGGTCCGTAAAATTTCCTTCCCGGTCTGTAATATAATACTTTTTGGTAT
AAGTCTTTGCTCGACTAAAGGCTGATAGATCTGTAGGTATGTCGAGGCTA
TTTCTCCGCCGATGCGACACTCATAGAAGCCTGAGTCCTTCATAACACTA
GACTCGATAGTCAGCTCGAATACAACTTTCTTGTCCGAGTTTAAGTAGGG
TTTAGCTTTCAACCTATGATTAAATTCAGTAAGTGTGTTTATAGGAATTT
GTATTTCATCCAAGGATAGATTTTGAATCTCAAATTCGCCAATCGCCAAG
TCTTGAAAAGTTTTCGTTTTTGCAGTACACTTGACTATTTGGTTAGTACT
ATCGCCTTTCGTTATAATCCATGATATAACAGCAACTTGGTTCTCAATAA
CATATTGTTTCTCTCGGCTGGCAATTGCACTGGAAAAGCCTGTAACAGAA
GTTACACTACAAAAAAGGTAGCAAAATGTCCACGTAGCAGACAAAATAGT
GATGCGATTAAGTTTCATGTCTACTATTGTGTATGTAAATCTGGATTTAC
CGTCTGTTTGAATCGATTGTAATGTTCATTccagataaaaaaaactgaaa
tttgcTTTCCATAAAAGCACAGCTTAATCTCCAATTCAATGATACCGATT
TGTATCACTTGCTTGTCCTTTGATCTCCGTTATTATCAACTATTCATGAA
TTCTATTCCGTGAAAGATTATTGATTGATCCTCAATCGATCGATTTTCAA
TAGGACGAACTACTGACTTTTAGGTTTGATACCACTTCGTATTACTGCCT
TCAGAATGCTTTACATTTATCAAAGAAGGTTTcctcaatgtttacatttt
atcatcaaaacaacaatttgaaTTTCGTTTGAAATATTCACACGTTAATT
TTCTAACCGACACCACTTGTttaaaaaacagttaaaaaatgttttcctat
CGTTGAAAAGATTTCTTGCATGTATCCTTGAATAAAGATTCAAACAAAAC
GAGGGAAAATGTTCGACATATTCATTAGATAATAAATATTCATTATTTGC
GGTAGTCAATCACCAAGGAACGTTAGAGGTCGGACATTACACGTGTTTCA
TCAGACAACGAAAAGATCAGTGGTTTCAATGCGATGATGGTTGGATCACA
AAAACGACATTAGATGATGTTTTGAATAGTGAAGGgtaCCTTTTATTTTA
TCACAAGCAAATACTGGAATACGAGTGAAAAGCTGGTGAAGTACGATGGG
AGATGGATCTCATGCTTCTCTCCTCGTTGTTGAGtgtcgttgttgttgtt
acTGGAATTTTTCCCGATGGAGTCTGTCAAACGTTGATTTAACGTTCACC
AAACGCTGTTAAGTTATGAACGTCTCATGGACGTTGCTTGCACCTTGAGT
GGAAGGATGTTGAATGTTGCTTCTGATTTGTTCATGAACTCCAAGTTACG
TTAGATTTTTCTATGAATCTTTGAAAAAGGCTATAATACTCATCTTATTC
TTTACGGTCTGCTTAAAATGGTGCTCGAAAAGGGTTTCTGTTCACCTATA
ATGGTTTCTTGTAAAAAGTATGtctacagtgtgtcccaaaaaaaaaacag
ataaatttttatataaagtaaaatcctcaaaactcgtTAGCTAAACTGGG
CTTAAAATAAGATTCAATTCTCTAATCAATAGattttcaattcccaagat
gattgaataggtttttgcGAAAGTGAACAAGccaaaaaattatgaacatt
tAGGTTTGGACTAATGGCCTCAGGCTTCAGAACGTTGCATTATACCATTC
CTTAATTCTCGAAATAATTTAGCTGACATAGACATCGTTTAACGTTTCAA
TAAAATATGCTCGtaacaatatttttcatgattgcTTCATTCGCAAAATT
CAGAGCAGTGAGTTTAAatgttttgatgaaatttatatcaaattatttaa
caaaaatctcgtttttatttttaaaagtaatttgttatacttttttatag
aattttttaCGTGCATTTGTTACTTGAACCCTTTTTAgttttatgaaaag
aaaaactttatgaTTTAGATAGGTCGAAAAAATGTCAAAGAAATGATTTA
AAACACTAACTAATCTTGT Run BLAST on NCBI transcript from alignment at sc0000173:361286..377698- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013797 ID=TCONS_00013797|Name=TCONS_00013797|organism=Clytia hemisphaerica|type=transcript|length=16413bp|location=Sequence derived from alignment at sc0000173:361286..377698- (Clytia hemisphaerica)
GGCTAAGAAACTATCTATAGTTAAAAAGGACAAAAACTAAAAAAATTCAA
CACAAAAGGGACCAGACTTTATACAATTTTACAATAACATAAAAACGTCA
GTTAGCAGTGGAATATGTAATCTGCAAACTCTGATAATATTTTGGATTGT
TTTTATTTGGTTTCATTGAATGGAATGCAAAAATCATTTGAATTGGTCAT
CAGTGTAGATTGAATTTCAAAAACGCATTTCTTTTAAGAAATTTCATTTA
CATACACATGTATTCTAAGTCCCCTAAACACAAACAATTTTATCATATCT
GATTTAAAACCGAGCTTTATAGAACCATAATCGAACAAGGAGACCCAAAA
ATATATACTGTTTTCCATAAAGTATAAAAACATTTAAATATTATGTTTGT
ATAGCATGCGGTGCTCTATGTGAACTGAACGGCATAGCACCTGTGGTCTG
TTGGCTCTGATGATCAGTTGTGTCCTTATAGCCCGCAGGTCGCGGAACGT
CGTAAATCTTTTCTGGTGGTACTTGGTATTGGTGGTCTAAAGCAGCGTCC
GCGCTACGTGCAGGCGGTAAGAAATCATACGCCTGACTTGCACTTTCGAA
TGTCTGTGAAGGTTGAGGAGGTAGAGGGGAGGTCGGTTTTATGAAACTAC
TTCTCGGAGGAATCGGTCTTTCTAACATTGCATTTGTGTTCGTTCTCGGT
AATACGTCGTAAAGAGTCGTCGGGTCGGTTTCCGACGAAAAGGCACTGTC
GGTTGTGTATCGTCGGCGAGCTAGAGGGTCGTCCTCCTCGTGAAAGGAAC
GTCCTCCACCAGTTGAATTCGTAGACGCCGATGATCTTGTATTCGGTAAA
ACATCGTATAACGGACTACCTGTGTGCCTCGGCTCGTCATCCGTAGCGAT
AGACGAGTACGGCGTACTAGCTTCGTTCGACGACCGTGGCTCTAACCGAT
GCTCGCAAAACGTGTTCCGTAAATCTTGGAGAATATGTGAATCAGTGTTT
CGACGTTCCGCGTAAAATTCGTCTTCTTGTTGTTCAAAGTCCATCTCTTC
TAATTTCTTTTTTTCACGTTCTATATTACGTTGTAAACTATAGAATTTAC
GGTCTTGATTATTCGGATGTAACTTTGCTTTACTCCCTTTGTCGTTCTTT
TTCTGTTTTTGCTCTCCTCCTGTTGGATGCACCTGACTGTTTTTACGCCC
TCCACCGTTCGCCGTATTCCCGTTCTCTCCCGCACTACCGTTCATGTCGT
TCGAACTTATTTTACGTGATATTTTACGCTTATTTTCTTGTTTTATTTGA
CCGTTCGTGACACCCGTCTCTTGTAAGTGCACTCCACCGTCAACGCTCCC
GTTCATATCATTTAACGGCCGTTCTTCGTCACTCTTTCCCGCAGAGTTTT
TATGACGTACACGAAACTTTTTGCTTTTACACATCGCCTTGAGTCTCTCT
TTACGCGTACACATGCAATACGTTATCAATATAATCAATAAAAACACGGC
GACGGCAGCGCACGCAATCAACGCCGTAAACACGCCGTCAAAAATAGTTT
CCTCCAAAACAACACGTCCCACGCTCCACGAACTGTAATTCGAGTTTAAA
ACGTTCCGTACTTTTAACGTATATCGTTTACGTAGAAAATCTATACCGCA
TGTCTCGATGACGTTACTCGACGTATCCATACGTTTAACAACTGCCTCGT
TTTCAAAAACTTCAACCTGGTATGAAAGTGAGGCTACAATACAGGACCCG
ATATTAGGACCATCCCAACGCACATGCGCACAATTGTCTTGACTCATCAA
ACTTATAATGACATTCTCAGGGGGTTTTGGTTTCAATCCCATCTGGAGAC
TAACACTTCTACGTAGAGTCTGTACTGCTCCCTCGTATATGAGGTCTACG
GTTTTTCCGCAGAATTTCTGTTCTGTAAATGACGTAACGTTCTTCAAAGT
AAACATGTAACATCCGTCAATATTTGTTCTCACGCCTTTGACTTTTTGGG
TTTTCCCTTGAAATATCATTGTCACTTTGGGTTTTGGTTTTCCACAGAGC
TCGGTCCGTAAAATTTCCTTCCCGGTCTGTAATATAATACTTTTTGGTAT
AAGTCTTTGCTCGACTAAAGGCTGATAGATCTGTAGGTATGTCGAGGCTA
TTTCTCCGCCGATGCGACACTCATAGAAGCCTGAGTCCTTCATAACACTA
GACTCGATAGTCAGCTCGAATACAACTTTCTTGTCCGAGTTTAAGTAGGG
TTTAGCTTTCAACCTATGATTAAATTCAGTAAGTGTGTTTATAGGAATTT
GTATTTCATCCAAGGATAGATTTTGAATCTCAAATTCGCCAATCGCCAAG
TCTTGAAAAGTTTTCGTTTTTGCAGTACACTTGACTATTTGGTTAGTACT
ATCGCCTTTCGTTATAATCCATGATATAACAGCAACTTGGTTCTCAATAA
CATATTGTTTCTCTCGGCTGGCAATTGCACTGGAAAAGCCTGTAACAGAA
GTTACACTACAAAAAAGGTAGCAAAATGTCCACGTAGCAGACAAAATAGT
GATGCGATTAAGTTTCATGTCTACTATTGTGTATGTAAATCTGGATTTAC
CGTCTGTTTGAATCGATTGTAATGTTCATTCCAGATAAAAAAAACTGAAA
TTTGCTTTCCATAAAAGCACAGCTTAATCTCCAATTCAATGATACCGATT
TGTATCACTTGCTTGTCCTTTGATCTCCGTTATTATCAACTATTCATGAA
TTCTATTCCGTGAAAGATTATTGATTGATCCTCAATCGATCGATTTTCAA
TAGGACGAACTACTGACTTTTAGGTTTGATACCACTTCGTATTACTGCCT
TCAGAATGCTTTACATTTATCAAAGAAGGTTTCCTCAATGTTTACATTTT
ATCATCAAAACAACAATTTGAATTTCGTTTGAAATATTCACACGTTAATT
TTCTAACCGACACCACTTGTTTAAAAAACAGTTAAAAAATGTTTTCCTAT
CGTTGAAAAGATTTCTTGCATGTATCCTTGAATAAAGGTCGGTTTACATT
TGCTTTCGATTTTTTTTTGTCAGTTGCTAGCTAACATTATATCTTTTTCT
TGCTGGGTGTTTGTGATTTTACTCTATAAATAAATCAAAAAGTTGAACAA
TAATAGGTAATTAACGGAACAATAGAAGGTGTGAGACTAGAATAGAGCAG
TTCTTCTATCCCTGCTCGAAAATCCTGATCTTCAAACCCTGAGTGTAAAT
TGCCTTGAAAAGTAATAAAAGAGACTACCGACTGAACTTGAAAAGGCTTT
TTAAAGCAATTTACACCCGAAATTGCAAATCATTCTCCAGTAAGGCCCAA
GAATTTTACTTTTTTTCTTGATGTACATATGCAATAATACCGTTGAAAGT
ATTATAGGAAAATTATTACAAAACAAAACAAAAATTCAAAACTTCATTTT
TTGTAGTACTTTAAATTTCTTGCGTATCATCAGCTCGGAAAATTATTATC
AAAAAGCGGAGAGAAGTTTTAAGGAAACTGAAAAAACAACCGAATCTTAT
AATTATTCTTTTGGAAACCATGAAGTAAAAATATCTTCGAATATATGGCT
TAAGTATTCACAATCTTTTCTTAAGCTATCCCAGCCTTCAAAGTAGAAAT
TGTTTAAATAAAAGTATAAAAACGTGTTAAAGTTTGTAGAGCCCTGTAGA
TAGACAGTCGTCTGAATAAACAAGACAAGCTGAGTTTGTAGACTAACTGA
GAGGCTTAGAGTAAGGTTGAGAAAAGTTAGTAGAATATCATCAAACTGAA
AGAGTAGCAGTTTATTGAGTAATTTACACAGTTCTGGCGTCACAAACTTG
CTCCTTAGGCCCTGTCCACAAAAGACCCGAATTTGGCCTAAATTACTTAA
ACAGACCTTTATATTCTTAGAAAAAAATTTTTGTTGCAGAATGGTTGCCA
TTTCATACTTTTTTTGAAATAAGAAACAAAATCATAGTGCTAGCTATAAA
CGCAATTGTGGGTTTCTATATCAACATTTGCATTGAGCTGTTCTTTTACT
CATCCAGGACCAGCTATCAAAAAATGATCCCAGGGTCATCGATTTTTATC
TAATATATAACAAATATGTTAATGTTATCTTTCGTTGCAAATTACAATGA
GGATTTCCTAACTGATAAATTTGCTAAATGACTGAACGCCCATTCAACGA
CACAAATAGCTATGTTGTGAGAAAATCAACCAAGAAAGACATTGATACAC
CAAACTACTCAAAAATAAAACTGTTCACACTTCATCACTTGTCAATATCA
CCCTGTCATTGTCTGTAAATAAGACATGGATAAAGTTTTTTCATGGCTGA
CTCCTCAAGCCCATTCCCTTTATAGGTGTGCACTCTCCTTTGCAACCACG
TGGTAGAACTCTTTGTAAACCTATCGCTAGCAAAAATTTAAATTCTTTTA
ATCCAAAATACTCAAACTGGTTTTCAACCTACCTTACATATTTCAGCCTC
AACTGTCAGATTACAGTTTTAGTATTGTCATCTATTGAAATTTCATAACC
TCAAATCAATTCAACAACTTCCTTCACCATAAAAGTTAATTGTTTACAAT
CACTTTTTGGGAAAATATAAGGTGGCCTGACAGTGGAAAGAAGATAAAAA
AACTCTTGAGGAAGTGCTTTCAATATGGCTCATTTTACGTTAACTAATTT
GTCTTTTCCAGATTTGAAAATTGACCAATAGAGTGAACTGTTTGATGTGT
TTCAAAGTCTGGTTTAGAGAATTCTATATACAAAATGAAATATGCAAAAA
TTGTAACAAGTCAAATTGGTCAATGAAATTAGCCTTTTAAGGGTTGGTCT
TGGTATTTAATTCTGCACATACCTAGTCGAAGAAGGCAGTTGGAAATGCG
ATGCATTCTATTATTATAATAGGTCAAGCATTTAAATGTGCAGGCGAGAT
CTGATTTCAATCAAAGATTGACGAGTCAATCACAAAAATTGTAAACGTGA
TAGGGATCGATAACTTTTTTTTTAAATAACTAAACTGTTTGCCCGCAACA
TCTGATAAAATTTCAAAATGACTAAACCTTACTTTTTTCTCACGGATTTT
AGTGAAAGCTCCCTTTAATTCTAGTGACTCTCTTTAATTTGAACCTCTAA
ACTGGAATGTCTAATGACTCCTTAACTCGAAATTTCCTTAACTCGCACAA
ATTTGTGTTCCCCATGTGGGTTTGAGTTGTGGAGACTCTTAACTGTATCT
CTTTATTTACCTCTGATGTGTTTTCAGTCTGTTACTTGAAATTCGCTGAC
CAAAGTCTTCTTCTGCATTGGTTCCCTTGCTTTGATTCAAAATATCAATG
AATGATCCCAAAAAAAAATTCGAGACCTAATTTGATGAAAGTTGGCGATC
AATACCAACGGTATAAAACAGTTTAAGAATTCAACCATAAATCATACTGT
AGTAAACAAAGCGAATTCTTTTTTTCCAAATAAAGAACTTAGACTTTCCT
CGCTAATTTCAAACAAACTTTTGTCAACTGCCAAACTATTTTCCAAAAAG
CCCCCAAAAAACCAAACACTTCACTATAATCTTGATTACATTATAGGGCA
AAAAAAAAAGATTTTAAACACAAAAATATTTTCCTTTTGCTGCCAATTTA
GAAAAATCCTCTAATAATTTTAAACCAAAATTTTCACCAACTGTCAAACA
AGTTAATTTCAAAAAAGAAAATCCAAAACATTACAATCAAAAAAGAACAC
GACTAAATGATTATTACACACGAGTATTTTTTGCTTTCTTGATGACGGCA
TATTGTCATCAACTCGTCATTTTCATAAAACAAAAACAAAACATAATAAA
TTGTCTCATCTTAAAAACGACGGCTATAGTTCTCCTTCGTAGAGTATAAT
GAATTAAGTGAGCTTTTTTTTACCCCAACCGAGCAATTTCAGATATACTT
TTTCCTCTGTTTTCATTAAGTTTCATTTTGTTATAAGAACCATCTAGAGG
ATGTGGTAATGGTCATAAAGTTACACTCAAGCAGACACATAGACATAAGA
GAGACACATACACGCTTTTTTTTTTATAAGAATGGTGTTTTTCATTTTCA
TTTCATCATGGATATTCTTAACTTTTTGGCGAAAATCATCCAAAAATATT
CTTACGGTATTCTTAGGTTAAGTTCGAAACTGGCAATCTACAGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGTAT
TCTTATAAAAAAAAAGCGTGTAAAGCATAAAGGGGTAAATTCTTTGTGAG
CCCTATTTTGCTTTAGAAAATACTTTTTTTTGAGTCTGAATATGTTTTTA
CTATGCTCGGTGTCAATGCACATTTTTTGTGATTCGGAAGATGTTTGAAA
TAATTAACTGAGGTTCATTGAGCAATACTTATGCTCTTCCATATTTTGCG
ACTAAATATATTTATAAACTTTATGCTCACCCGGTCTCTCAAAGGGGCAC
TTTTTCAGTAAATATTTGGTCTCTGTAAGGGTCGATTTTCGGAGTTCCCA
TCCGCACATGACCCTCATCCTGCAACCCTAGAACCCCTCCTCCTGAAGGT
ACTCACCAAACAGCGTGTAAGAACGTGTAACTGAAAACTTAATATATTAT
ACCGTGAAGCTGGGTAACTTACATCAGTGGAGGGAAACTTGCATAGCCAT
CAAATGACTGACCAATCAAAGCAGCAAAATTTCAAAACAAATGAACTATG
CAGCTCCGCTGGCAGCTTTACTCTACCATTTTTGATTTGATTTAACTTTG
TATTTTAATGACCTGCTAGGTCATTCATTTAAGGGCTATGCATGTTAGCC
TCCACTGATGCAAGTTACCCGATCCCACGGTAATACAATGCGCCATAAGC
CTAGAAATATACACATTATAAACCAAATTGAAATTCAAATCGTGTTTCTA
CCATAACTAAAATTTGAAGGTTGAAATTACTAGAAAATTCCAAAGTCTCA
TGGTTTGAACACATTTCTACTTTCATTTTTTCATGTTTACCAGGCATATA
TTCTATCTATCCATCAGAATGTTGAATAAAATACTGCTTCGAGCCCCACT
GGTTTTAAATGTGCCTATTTCGAATGTTGTCTGTTCAGCCTGATTGCCAA
AGATTTTATTTGAATCCTGTCTGCAAACCAACTTGAACTTTCCATTAGAG
TCAGTGTCTTTTTAAGAACTCTATAAAGTAACAAATTAAAAGTTATAAAT
TTAAAGTTAAAACGATTGACCGACTTACGAAAATATATTTTTTATGCAAA
GTTGCCGATTTTGTAAACACCAATTTTGAACAGGCCAAAAACACAAAAAT
GTCTTGACATTCATTAAAAAAAATGATTGGAATGTGAATTCTAATTTGCC
ATCTAAATTGTCAAGTAAAAGTTATCCAATCAGAAGTTGACGTTTCACGG
TTAAAATTGATTACAATCAATCATTCAAGGCATAGAACGTCTAAATGACG
TTTGAATAACGTCCATACCGTCTTTATAACGTTAGATGTACGTTAAAACA
ACGCGGTACTTCGCCAATCAATCATTTAAGAGACGCAATACAATTGCAAA
CTGTTGCCAATCTTTAGGCATAATTGTTAGAATCATTACATGAAATATTA
GAATTGTTGCAAAATGAATTCCATAGTTTTTCTTATAAAAAATGGTAAAT
TATCCATTGCTAGACGCGGAAAGGCGACTTAAAAGAACGGTTTGTAATAG
GCTTTAAAGGGAATTCAAAGTGTACTTAAAAGCAAGGGGAACAAGAAGTA
TTTTATTTACTTTTTTTTCGACGATGCTTTGGTGACAATCTTTTTATGCT
TAGGCAATTTCTTACGAAGTCGAATAACAGAGACTTGTCTCGCTTTTTGT
TCAAAGCCGACCAAACCTTAACAAACACACCTGATAAAGAATATACAATA
ACAATATTAGGATAAAATATCAGAGGCTCAGCTTTGAGAATGTTCTAATA
GAAACCACTTCTTTAGCTGATAAGTCAATAAAATGAGCACCTTAAAAACG
TACCAACAAAAAGAGCACGAAAAACGATAATTATAATACAATCTTTAAAA
AAGAAACCATCTAACCGAACCATAGGGTTTCTGATGTTTTCTTTTTAAAT
AAATACGTCATTTATAACTTACAAGCCATCTATATATCGGTGGTATCCAA
CGTCTATTCAACATCCATTTGACATACATTACGTCATGTCCACAAAGAGG
CCCTCTAACAGAGGCGGAAATGACTTGTTTGCTTGTCCTCGAAATAAAAT
TAGGTCTACATATTCTTATTGTTTTGAGAATTCCTTGCTCAGTTATGCGA
GCGTGTGATTGGGTGTTTATTTTTGTTTCGCCGTGATATTTTGACACAAT
GAGATTGTTGTCATTTAAATATCACGCCCTACCCTACGTGTATCACGCCC
TCCCCTACGATTCTCACTTCACTATGACTATCATTACTATTTCTACACCA
GGCTATATTCTCAAATTTGACAGCAATGTACACACATTCTTTATAGGAAT
CAATGTGCTCTTAAAATTGGTCCTTTTACTCTTAAGTAAGTCTGTGACCA
CAGTGTAGTAGACGACTCAAAGGCTCCTCTTTCGATAGCTATCTGCACGA
AGGTAGAGAAGGGCACCACTGTCTCTCCTTTACCCTTGATCCTTCTCTTA
ATTGTTGAGCATCAAGCTCGGGTATCGATTATCATTTTGTGCTAAGTATA
AAGACTTTGGAAAATATGGCGAATATAACTTGGTCCAGAGTTTATAAAGG
TCAGTGAGTTAACCTCAAATTGAAAATTTTCCAAAACAACAACTTGTCTA
TCATAATCAATTTCAGGCTATATGTACTCGTAATTATTGCTTGCTGGAGT
ATGGCCATCTTGAAATAAAATTTTGTAGGGCCAAAGTTGTCTGTCTAGAT
CTTTATAGGACTCTAATATAAGCCTTCACCTTCATCACTGTAGTTTTAAA
ATGTCATTTGACATGGATATGTCATTTAATGGGGTGATTCGACTATTTGT
TTGCTTCAAAAAAAAGTTTTTGAAATTCTTCAACGCTTAGCAAATCTGAT
TTCGGCGTGAAAGTCCTTTTGCGTTGGGTTATTTAGTACAAATGACCGTT
GATGACATAACGATAAGCTTCGTAAGCCCTGTTTGATTAGGGCTTTACTG
GCTTTGCTATTTTAAGCAGTGGGATGAAAACTTTTTCCTTCGTAATTCTT
GAACATTTTGATAGTTTGTTTGTGAACAGTCAGCTTTTGAAACGTATGTT
ATAAAGTCTCAACTCTAATGCAACTTTACTCTGTACTTTTTAACGTATTT
CACGTGAATGCGTCTGCAGGTCAGTGCTGTTGGAAGCATTATATTTGGGG
GGAGCATAAGTTCAGTGACACCGTGAGAGCCAACCATGGTTTTCCCCGAT
GGGGGGATTTTGAATTCTAGAGCTCTAAATTGGCTAAAAACACACTTAAA
AGTTTAAAATAACTCGAATAAAGGCAAAATTTAAAGGTAAAATATTCCAT
TTCAAGAAAAAAAATAAGTGCGCCATGTCACTATATAGAACCTGATCATA
TATCTCATTGCCAATTGAGTTATAATGAGCCTCTACGCTGAAGAGTTGAC
AGTTATAGCATAGTAAAACATGTAATTTTTCTCAGGAAATATCTTCTCAA
AGAGTTATCTATCCGAGTAGATTCAAAAACGTCTATAATATCTTTATATA
AGGAGAGAAAGAAAAGCTATTAATTGTCGTTAACATACCTTAAGCATTTA
TGTGAATTCCGCTTTTTAAAAACCTTGATGAAAAGTTTGGCACGAGAGTC
CGATGATTCATAGTCATCCGGTTTTGTGTAATTATTGGGCTTTCGGGAAA
ACGAAGCTGATTTTAAAATACTATTTTTTGCCTACATGATTGCAGTGTAC
TTTTGTAGAAAATTCCTTTTCGATTTTTTTTTGCACAACCTCAAGGGATC
AGTAGTACTTTAACACGTTCGCTGCCAACTACGAAGTATACTCGTAAGAG
AAGGTCAAAATATCGGTAGTACTTCAAAAGACCAAAATATCTGATACAAA
AATTTTTAACTGCTGTTTTATTGTTGTTTTGAAGTCTAATGAAATTATGC
GTCGTTTGGTGTCTGAAACTTTCGACGAAATTGCAAGTGGTCAAATTTTC
GATTTCTATTAAGGGCTCGGGAGTGAACGTTTGATACTACGTACGGTTTT
TTTTTAATTTAGGTTAATTCTTAGCCACGCTACGAGACATAACACTACAC
ATTCGGACAAATGTATCGCGCTCGGAACTATAATAAAGAATGATTTAAGT
CCCTGTTTTAAAGGGGGATGAAGCCCAAATCTTTAAATCTCAATCCAATC
ATTAAAAGAGATTATTTGACATCAATGGTTTTAAAAGTAGTCTTTCCCTC
CTCTCAGCCTTCTTGATAACCATCAATAGCGTGTTGTAGTTCTTAACAAC
AATTTAACGGCTTAAACGACTTGAAAGTTCTTTCACTTTTTGTCCCGTTA
CATAATGTTGTTGATCACATTCTCACGCAATCCGAGAGTCCTTGAGTCTT
TGAATTCATTTTTGTACTTTATCACACTCGACACATGTCTACGAATTGAA
AAAGATATATATTTTAAGGTCTTAAAAAGGTCCCAAATGATCTGCTTTTA
GAGTACAGTAGAGTCTCTTTAAGTTGAACCCCTAACTCGAACGACTCCTT
CACTCGAACAGGTTTTCTCGTCCCTTCAGCCTTATAAATCCATATACATA
ACTCGAACGAATTTGTGTTCCAATTTTTTTGGCTCTAAACGAGTTGATAA
TTTGATAAAAATGGATTAAAAAATGAATTTCATAGATTTTTTACTGCACT
GTAAGGATGCGATTCCAAAAGCTAATTTTTTCGCCGCACATACCGTTAAA
CCCACTGCCCCCGACAGTTTTTAGCATGGCAAAAAAACTTTCCTTTCGTT
CTTTGCAATGATATTCATAATCTTCAACGTCTTCAGCCCATCCTCTTTAC
AAACGAGATTAAGAAAAAGATAATGTTCTGAGCAATCCCGTTTGAGATTC
TTATCAACAAAATCCAATATTGATACCGTTAGATGGTACGTCCATAGAAC
GTTCAGGAAACGTCCATTTTTATTTTAAGAGGGCTCTAACAAGGTCCATT
TCAACATCAACATTCACGCAAACTGTCGCTAATAATGATTTTTATCCTAC
TTGAAGACATAAACCTTTCGCCTCCGGTGAGATTCGAGCTTTCGACCCCT
GGTTTACAAGACAAGTGCTCTGAAATAGGTTCCTTGTATTTTCCAAAGGA
AAAGGATAATTGTATCTTTAAAGGAAAAAAGGTACTTGTATTTCAGATAA
AGAAAAAGAGTTTTTATATTTTCATTACTCTCATAGTCTAAAAGAGCACA
GTAATGAAGTGCCACCTCAGGCTGAACTAATTTCTCCTAATTACTTTTGT
TAGTTATCAAATTTGACTAATGTTCTATTTATTCAACCTTATACGAAACA
ATGTAGAGGGGGCTGTTGTTCTTTAGAAAGACGACAAATGTCTTGTATCA
TCAAAGGAAAAATCAGTTTTTTGTATTTCTGAGGAAAAAGAATTCTTTGT
AATTATCAAGGAAAAAGCAGTTTCTTGTATTTTTCAAGGAAAATGCAGTT
TCTTGTAATTTTTCAAGGAAATTTATTTCTTGTATTTTTCAAGAAGTAGT
AAATTTGTCGAAGTACGTACTTTTCAAAGAAAAAAGCAAGTTTTTGTATT
TCTTAAGGAAAAAATGTCATGTACCTCTCAAGGAGATAAACTTTGTGTAT
TTCTCAGGGAAAGAAACAAATTTCTTCTACCTCTCAAGGAAAGAAACAAA
TTTAGATTGTCTTCAAGAAAAAAAGTCATAATTCTCATACAAAATAAATG
TCTTTTTTATTGTGTATGAAGTGAAGAAAATGCCCTCTCGTTGCCCTAAT
CTAGGCTCCATATAGTGAGAAACCTGTCAAAATCTAGTTGAACTCTCGAC
CCCTGGTTTACAAGACCAGTGCTCTAACCCCTGAGCTACGAAGGCACATA
CATCGTCAAAAAATCTCATATAATTTAAAGCATTTCGTATTTGACAAAAT
CTTCATAGATGAGAAAAATGTCTTGGAAACGCATATCCCGGATTCGAATA
ATTATCCTTTGATAATTCCTTTTAATTACTTGTAATTTTGTTATGATGCT
TTTTAAAACAAAAAGCTTCATGAGCGTTATTTGAAATTCAAAGTGAAAAG
AAGCAGGCTTTACTAAAAAGCCTTGAAAAAACTTGTTAAATTTACAGCCT
AGCTTTAACTTTTTTCATTATTTTCTCGTTCCCATAGATTCAAACAAAAC
GAGGGAAAATGTTCGACATATTCATTAGATAATAAGTAAGTATCTTTTTT
TTCGGTCTGCCTCATTCTTGCTTTGAAATCACTTGAAAAAAATTACATAA
ATTTGTATTCATTTAAATGCCGGACACACTGTATAACCAAATTTTCCTGG
TAAAGTAGTGTTGCAATAGCTCGAACCTCTATAACTTGGCTGTGTTCTTG
ATTCGAAATGTTCGCTTTTTTATATAAGAATAAATGTCCATGATGAAAAT
GGCCAAAAACTTAAGAATATGCTATATATCACATCACCATCGTGGAATTT
TGCTGCTCAAGCTAAGAATTTCATTTTTAGAGCATTTTCAATTATAAATT
GTCAATTTTCCCTAAGTAAGGCTCACTTCTTTCACAAAAATGCCCTTTTA
TGCTTGATACGTACTAAAGATGTAAGAATATTTTAGGTTGATTTTCCCAA
AAAAGTTTTTAAGAATATCCATGATGAAATGGATTTACACCACCATTCTT
ATAAAAAAAGCGTGTAACTCACTGATAGTAACACCGTGAATATTTTCCCA
TAAACGAATGTCTCCAACGATTCTACATAACTGATACTGTACTCTCTTTT
CGTCTAGATATTCATTATTTGCGGTAGTCAATCACCAAGGAACGTTAGAG
GTCGGACATTACACGTGTTTCATCAGACAACGAAAAGATCAGGTAACGGC
AAAACAACGTCTACGTAAAATATTGAACGTAGGAACGGCGATCGCTAGAT
AACGTTTTTAACCTTAAGGTTTTATTTTAAGATTTTTTTTTAAGATGGCG
AGAGCTTAGTTTGACGAGCAACGCATTTATTTTCATTTTAACGAGAACTA
ATATTCGCTAATGTTTTGCCTGAAAGTGAGTGTTTTAGGAAAAAATTTGG
GGTTACATTACTTTAGAAAATCACGAGAGTGCTTAATTTTGACTAGAACT
AATTTTTGGTGAATGTTGGCAAAATCGCTATGAAATAATTCCCCTTGATT
GAAACCACCAACCGTTCATGACATCAATTTAACTAACTTGAATTTTTAAA
CTAAGCTCAAGTGGCAAGCTTGTGGACGTCAAAGAAAGCTTGCTGCGGCT
GCTCAATACTGGTTTTTCGACTTCCTCATCTGAAATCAAAAAGGCTCGCT
TTTCACAAATTATTCATGAAATTCTTCTTTTCCTACAAATTCTCTTTCTT
TTTTTCTTGCAGTGGTTTCAATGCGATGATGGTTGGATCACAAAAACGAC
ATTAGATGATGTTTTGAATAGTGAAGGGTAAGTAAACCATTACACACGCG
TCGCTTAGAAAGGACACTTGTTACAGTGTCGTTATAGCGTAAGTCAGCAA
AGAAACAAGAGAACCGCGTTGATCATGACCTCATCATGAAATATACTTTG
CTGTTTTTTGGTTCTTTGCTGACTATTAGGTAGATGCAGTCTGTTGGGAC
AAACTAGCCGGGTTAGGGTTAGGGTTGCGGTTGCGGACGGCGAAATTTGT
CGTTTTTTATGAAATTTGTCGTTCTTTTTATAAATTTTTAGTAAATGTAG
GATTCTTTAGATTAACCCACCTAGTTTGGTGAATCTTCAAAAATATATTA
TTAGTGAAATCATCCCTGGCAAATGCGTAATGAGTTATTTCCGTTGCGTG
GTTTTTCTTGGAAAATACATTTTGTTTGATTTTCTTTGGAAAATACACTG
TGTGTAATTTTCCTTGGGAAATACATTTTGTGTGATTTTCCTTGGGAAAT
ACATTGTCTGTGATTTTCATTGGGAAATATATTTTGTGTGATTTTCCTTG
GGAAATACATTTTGTGTGATTTTCCTTGGAAAATACATTGAGAGTGGTTT
TCCCTGGAAAATACATTGTCTATTATTTTCATTGGGAAATAAATTTTGTG
TGATTTATCTTGGAAAATACATTGAGTGTGAACAAATACATTGTTGAAGC
GAGACCTTTCTTGGGGAATCAGAAACCTGATAAACAATATTTCTTCTGAA
AAAAAAACTGAGATAAAGATTGCTTTGGTTAACTAATGATTCGAAGCAGT
CATAATTTGCGGTCATATTTTCTGGTTTCCGGTCATCATCAAGTCTTATC
CGCAACAATTTAATATAAGGAATGTTTGGTTTGCTAAAAGTAATGAAATT
CATAAAATATATTTAGTGCGTATTCTGACTTGACTCATTCCATCTGATCA
TTATTAACGCCATTTTTTTGGTGGCACACGCCGTTGTTAAAAAAAAAAAC
CCGGAAAAAACCTTTCTCGAAGTTTTCAGAGTGTAAAATTTTGAAAGAAA
TTGGACCATTCCATTAAATTTCCACACAAGGGGGACCAACCAACCATTTC
AAGCCAAAAAATATTTCTTGGAAATGTGTTGATAGCCCCTGGAAATTTGT
AAAGAAACCTAACAAATTCTGCTCGAATTACCCCCTGGACATCCCCCGTA
TGGATATGAAATATAATGGCCCCTCTCATCTGGGAAATTCTGCTACGAGA
CTGTACTCTTAAGTTCCAAATAAACGGCCCCCCCTCCGCTTGTTAATTTT
TCGAAAATTTTCCAACCCCCCCGGACCTTATTAGGACCCCCCCCCCCCCC
CTTTTTTTTTTTTTCGAAAATTTTCCACCCCCCCCGGCCTTTTTTAGGCC
CCCCCCCCCCCGTTTATTAATCTCTAAGAATATTTTCAGCTGTCAAAGAG
AAGGCCCCTTATTTTGCTTTAGATAGCCTGATTTTAGCCTATTTTTACCT
TATTTTGGGGTTTCAGAAGTACAATTTCCAACCCCCCGGCAATTAGGCCC
CCCCCGTTTATTAAAATCTAGAAAATTTTCGACCCCCCCCGTTTATTTGG
AACCTAAGAGTATGTTTTCTTTTTTTCAGGTACCTTTTATTTTATCACAA
GCAAATACTGGAATACGAGTGAAAAGCTGGTGAAGTACGATGGGAGATGG
ATCTCATGCTTCTCTCCTCGTTGTTGAGTGTCGTTGTTGTTGTTACTGGA
ATTTTTCCCGATGGAGTCTGTCAAACGTTGATTTAACGTTCACCAAACGC
TGTTAAGTTATGAACGTCTCATGGACGTTGCTTGCACCTTGAGTGGAAGG
ATGTTGAATGTTGCTTCTGATTTGTTCATGAACTCCAAGTTACGTTAGAT
TTTTCTATGAATCTTTGAAAAAGGCTATAATACTCATCTTATTCTTTACG
GTCTGCTTAAAATGGTGCTCGAAAAGGGTTTCTGTTCACCTATAATGGTT
TCTTGTAAAAAGTATGTCTACAGTGTGTCCCAAAAAAAAAACAGATAAAT
TTTTATATAAAGTAAAATCCTCAAAACTCGTTAGCTAAACTGGGCTTAAA
ATAAGATTCAATTCTCTAATCAATAGATTTTCAATTCCCAAGATGATTGA
ATAGGTTTTTGCGAAAGTGAACAAGCCAAAAAATTATGAACATTTAGGTT
TGGACTAATGGCCTCAGGCTTCAGAACGTTGCATTATACCATTCCTTAAT
TCTCGAAATAATTTAGCTGACATAGACATCGTTTAACGTTTCAATAAAAT
ATGCTCGTAACAATATTTTTCATGATTGCTTCATTCGCAAAATTCAGAGC
AGTGAGTTTAAATGTTTTGATGAAATTTATATCAAATTATTTAACAAAAA
TCTCGTTTTTATTTTTAAAAGTAATTTGTTATACTTTTTTATAGAATTTT
TTACGTGCATTTGTTACTTGAACCCTTTTTAGTTTTATGAAAAGAAAAAC
TTTATGATTTAGATAGGTCGAAAAAATGTCAAAGAAATGATTTAAAACAC
TAACTAATCTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013797-exon-sc0000173-1575043694:374662..377698 | TCONS_00013797-exon-sc0000173-1575043694:374662..377698 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1575043694:365064..365111 | TCONS_00013797-exon-sc0000173-1575043694:365064..365111 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1575043694:364407..364491 | TCONS_00013797-exon-sc0000173-1575043694:364407..364491 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1575043694:363822..363886 | TCONS_00013797-exon-sc0000173-1575043694:363822..363886 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1575043694:361286..362219 | TCONS_00013797-exon-sc0000173-1575043694:361286..362219 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1510915933:374662..377698 | TCONS_00013797-exon-sc0000173-1510915933:374662..377698 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1510915933:365064..365111 | TCONS_00013797-exon-sc0000173-1510915933:365064..365111 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1510915933:364407..364491 | TCONS_00013797-exon-sc0000173-1510915933:364407..364491 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1510915933:363822..363886 | TCONS_00013797-exon-sc0000173-1510915933:363822..363886 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1510915933:361286..362219 | TCONS_00013797-exon-sc0000173-1510915933:361286..362219 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1491911889:374662..377698 | TCONS_00013797-exon-sc0000173-1491911889:374662..377698 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1491911889:365064..365111 | TCONS_00013797-exon-sc0000173-1491911889:365064..365111 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1491911889:364407..364491 | TCONS_00013797-exon-sc0000173-1491911889:364407..364491 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1491911889:363822..363886 | TCONS_00013797-exon-sc0000173-1491911889:363822..363886 | Clytia hemisphaerica | exon |
| TCONS_00013797-exon-sc0000173-1491911889:361286..362219 | TCONS_00013797-exon-sc0000173-1491911889:361286..362219 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000173 | supercontig | sc0000173:361286..377698 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013783 | Ig-like_fold |
Blast
BLAST of TCONS_00013797 vs. Swiss-Prot (Human)
Match: UBP22 (Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.070e-27 Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 3
Query: 2997 LSLKRFLACILE*RFK-QNEGKCSTYSLDNKYSLFAVVNHQGTLEVGHYTCFIRQRKDQWFQCDDGWITKTTLDDVLNSEGYLLFYHKQILEYE 3275
L + F+A E R Q + + + DNKYSLFAVVNHQGTLE GHYT FIRQ KDQWF+CDD ITK ++ DVL+SEGYLLFYHKQ LEYE
Sbjct: 432 LDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE 525
The following BLAST results are available for this feature:
|
