TCONS_00013751 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013751
Unique NameTCONS_00013751
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length686

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013751 ID=TCONS_00013751|Name=TCONS_00013751|organism=Clytia hemisphaerica|type=transcript|length=686bp
caagcaaagattttaacaaccaactttgtgccctctttctgcctactcta
acaattagaataggcagggcagaaagtcggccgtctaaactagagctaag
agaACAAGAACACGTGGGTATTTAAAAGAAACTGGGACTGAGCAGAATTC
TTATTTTGAGTTGCTTTACATCGTATATTCTGGAAGGTcaactttctgtt
tttcttgTCTTTTGAGAAGAAAGTTGACCGCAAAAGTGGAGCTTCTATAT
ACAAAACAACGACTTTTTGACGATGGGGGGTTACGTTTTTCAGGCAAGAC
GCTCTCTAGATTTCTAGCCATTCCAAAATTTTATTGCCCCTGGAATGAAA
ATGCTAGATTTTGCTTAAAGTGAAGTTAAAGAGCCTATTAATgtcaatta
attttttcaaaaattttttacattgattTCAATTATATTAAAGGCTTCAA
ATAGATTTGCACAAAACAGCTTCAACTCATGAAATCTCGGCTCTTGACAT
TAAATTAGTAAAATGAATATATtgggaatttttgtaaattgtaaatttta
aaGAGATGACATTTTTTTGTTGTATATAATACTCTTaattttcacacatt
tttttttgtttgttttttactttttattttgtatcacAAATATTCTGTAT
AATGCTATCGTTAATAGAAGCATATCAGCTCAAAAA
Run BLAST on NCBI

transcript from alignment at sc0000171:364893..365578

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013751 ID=TCONS_00013751|Name=TCONS_00013751|organism=Clytia hemisphaerica|type=transcript|length=686bp|location=Sequence derived from alignment at sc0000171:364893..365578 (Clytia hemisphaerica)
TTTTTGAGCTGATATGCTTCTATTAACGATAGCATTATACAGAATATTTg
tgatacaaaataaaaagtaaaaaacaaacaaaaaaaaatgtgtgaaaatt
AAGAGTATTATATACAACAAAAAAATGTCATCTCtttaaaatttacaatt
tacaaaaattcccaATATATTCATTTTACTAATTTAATGTCAAGAGCCGA
GATTTCATGAGTTGAAGCTGTTTTGTGCAAATCTATTTGAAGCCTTTAAT
ATAATTGAaatcaatgtaaaaaatttttgaaaaaattaattgacATTAAT
AGGCTCTTTAACTTCACTTTAAGCAAAATCTAGCATTTTCATTCCAGGGG
CAATAAAATTTTGGAATGGCTAGAAATCTAGAGAGCGTCTTGCCTGAAAA
ACGTAACCCCCCATCGTCAAAAAGTCGTTGTTTTGTATATAGAAGCTCCA
CTTTTGCGGTCAACTTTCTTCTCAAAAGAcaagaaaaacagaaagttgAC
CTTCCAGAATATACGATGTAAAGCAACTCAAAATAAGAATTCTGCTCAGT
CCCAGTTTCTTTTAAATACCCACGTGTTCTTGTtctcttagctctagttt
agacggccgactttctgccctgcctattctaattgttagagtaggcagaa
agagggcacaaagttggttgttaaaatctttgcttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007681XLOC_007681Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013751-exon-sc0000171-1491911889:364893..365578TCONS_00013751-exon-sc0000171-1491911889:364893..365578Clytia hemisphaericaexon
TCONS_00013751-exon-sc0000171-1510915933:364893..365578TCONS_00013751-exon-sc0000171-1510915933:364893..365578Clytia hemisphaericaexon
TCONS_00013751-exon-sc0000171-1575043694:364893..365578TCONS_00013751-exon-sc0000171-1575043694:364893..365578Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:364893..365578 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.2196	6.83371	5.48257	5.37388	20.6241	15.3717	18.0036	16.7472	13.027	11.4827	12.5411	25.8714	7.35145	7.68167	4.92238	6.35226	7.19565	8.20098	10.594	11.0183	11.2731	10.7394	7.1491	6.3864	4.13988	6.49753	5.47475	5.9966	4.01761	4.96045
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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