TCONS_00013750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013750
Unique NameTCONS_00013750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013750 ID=TCONS_00013750|Name=TCONS_00013750|organism=Clytia hemisphaerica|type=transcript|length=427bp
cggcaatcacaaatatcttcatttcgcgtcctcgttgggtctaaaaagtg
agtcggtcggtcggtcggtcataAAAATTTTCGGGGTTTCCATTTTCCAT
CCATTTTTGGAGTGCATTCTTGGAGGAAACTGCCAGCCAGCCAGCAGCCA
AAAAAACGCATGTAATGGGTGGTTTGAAATTATGACCTTTGAACACTGTG
ACCTCCGACCCCAAAATGGCGCATGTAATGATAAAGAAAGTCAAAATGCT
GCGAATGCGCTAGAAATCGCTTGCAAAATATCGGCAATAAATAATAAAAT
TTTTGAACGAAGGAAAGGTCATTGacagaaaaagtccgacaaatttaccg
actcaccgactcaattctactcaattttcgagagtcggtcgggcgacgcg
aaacgaagatatttgtgattgccgcct
Run BLAST on NCBI

transcript from alignment at sc0000171:333456..333882

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013750 ID=TCONS_00013750|Name=TCONS_00013750|organism=Clytia hemisphaerica|type=transcript|length=427bp|location=Sequence derived from alignment at sc0000171:333456..333882 (Clytia hemisphaerica)
aggcggcaatcacaaatatcttcgtttcgcgtcgcccgaccgactctcga
aaattgagtagaattgagtcggtgagtcggtaaatttgtcggactttttc
tgtCAATGACCTTTCCTTCGTTCAAAAATTTTATTATTTATTGCCGATAT
TTTGCAAGCGATTTCTAGCGCATTCGCAGCATTTTGACTTTCTTTATCAT
TACATGCGCCATTTTGGGGTCGGAGGTCACAGTGTTCAAAGGTCATAATT
TCAAACCACCCATTACATGCGTTTTTTTGGCTGCTGGCTGGCTGGCAGTT
TCCTCCAAGAATGCACTCCAAAAATGGATGGAAAATGGAAACCCCGAAAA
TTTTtatgaccgaccgaccgaccgactcactttttagacccaacgaggac
gcgaaatgaagatatttgtgattgccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007680XLOC_007680Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013750-exon-sc0000171-1491911889:333456..333882TCONS_00013750-exon-sc0000171-1491911889:333456..333882Clytia hemisphaericaexon
TCONS_00013750-exon-sc0000171-1510915933:333456..333882TCONS_00013750-exon-sc0000171-1510915933:333456..333882Clytia hemisphaericaexon
TCONS_00013750-exon-sc0000171-1575043694:333456..333882TCONS_00013750-exon-sc0000171-1575043694:333456..333882Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:333456..333882 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.23605	7.79159	11.3675	16.1001	17.5925	10.4173	11.156	13.6815	9.87976	8.50899	15.3783	9.88688	11.1415	8.60639	7.71102	10.9008	9.83443	12.2918	9.62834	9.08187	11.3092	12.1961	4.445	4.41492	9.52197	10.9018	11.3695	8.36982	7.44751	11.49
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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