TCONS_00013589 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00013589
Unique Name	TCONS_00013589
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1501

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000170:49107..61016-

transcript sequence

>TCONS_00013589 ID=TCONS_00013589|Name=TCONS_00013589|organism=Clytia hemisphaerica|type=transcript|length=1501bp
aagaaataaagaaaaaagcaaaatggcagaaaatactacaaaaagagaga
aaattgcCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCtttcagtCGT
TTGATGGCTCTGAAAAGGATGGGAATAGTTGATAATTATGAGCGTATTCG
TGATTACAGCATTGCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTT
CAGAAATGTTGACCAGGTGTGGTATAGGAAAGCTAATTATGTTTGATTAT
GACAAAGTAGAACTTGCAAATATGAACAGACTGTTTTTTCGACCTGATCA
ATCTGGGATGAGTAAAGTTGACGCAGCTGTAAATACGTTAAgGGATATAA
ACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAAGTGTAGAT
AATTTCAATCATTTCATGGGCAGAATAAAATCAGGTGGCTTGAACGGAAA
GCCAGTCGATTTGGTATTGAGTTGTGTTGATAATTTCGAAGCAAGAATGG
CTATTAATACTGCGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGG
GTCAGTGAGAATGCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGA
AACAGCTTGTTTTGCTTGTGCACCACCGTTAGTAGTGGCATCAAACATTG
ATGAGAAGACATTGAAGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACC
ACCATGGGAATTGTTGCTGGTTTCCTCGTACAAAATACACTAAAATACTT
ACTGAAGTTCGGTACAGTATCATACTACTTAGGTTACAACGCAATGCAGG
ATTTCTTTCCAACAATGATTATGAAACCCAACCCGCATTGTGATGAAAGT
TTCTGTCTCAAACGACAACAAGCGTACCAGGAGAAGTTAGCAAAACAACC
GAAGGAAGAAGGCGTTaaagaaactgaagaagaagaaattgttCACGAAG
ATAATGAATGGGGTATTTCATTGGTCGACGAGTCATCCGATTTACGGGAG
GACACACAACTACAAGAATTGACTACTGGACTTTCGTACGCATATACTAA
ACCTGCAGAAACAACAGAAGAACAGACTGAACCAGCCTCTACGACTTCAA
CGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGATTTAATGagacaaatg
aaacaaatttagttcttttttagatttaatttacgaaaaaatcttctttt
ttaatttttttaagggGGTTGGGtctcttctttatttttttttgcaaaaa
tcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGAACAATTCATACCTTTT
TCGCCCGGGCTTTTTCgtcaaaaagtctttgaaatCCGACGTCGGAAAGT
AGAAAACATTTATCTTTCGCTAGCTTTAataattattgaatttgaatttt
tgaaccaaatttttaaatttctttttattttttatgtacTTAAGTGgtat
aaattttatttattatacaaTACTGAACAATGAAATTAAAAcagaaaatc
a

Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61016-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00013589 ID=TCONS_00013589|Name=TCONS_00013589|organism=Clytia hemisphaerica|type=transcript|length=11910bp|location=Sequence derived from alignment at sc0000170:49107..61016- (Clytia hemisphaerica)
AAGAAATAAAGAAAAAAGCAAAATGGCAGAAAATACTACAAAAAGAGAGA
AAATTGCCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTAT
ATTTTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTTA
GCATATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGGA
AGCTCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGGT
TAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTATC
TTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATCC
TTACAACACTTTGGTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTTA
GTTGTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGATATAT
TAGCACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAAT
TTTGTAATGGTTCAAATTTTCTCGCAAAACAGAATATCAGAGACTATATC
AGGCTTATACTTTGTTAAAATTGTAAGAACAATCGAGCTCTAGTTTTTTC
ATTTCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATGATTTTTTT
TTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAA
TTATGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATGT
ATAAAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCTT
TTCAGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTATA
AAATCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAATA
TTGATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCAA
ACATACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTTC
TTCACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCT
TCTGAAATTTAAAAAATTTTAATTTAAAGATCCAAATTTACAAAAAGTTA
TTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGA
TTGGAGGTGTGGGCAGTGTAACTTCAGAAATGTTGACCAGGTGTGGTATA
GGAAAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAAATCAAATCA
AATATTTAAAAACAAGCTCTCCTAGGATGATATAGTGCAATACTTTTACT
TAAAGGTTTTGTTTTTAAATAAGAGTGATCGTTTGCTTATTCATCAATTT
TAATTTACAAGCTATTTCACATTGGATTGACACGGATGTGGAGCAAGATG
ATTAAAAAGAGGGAAAGAAAAACAGTTTTTATATCAGCACAAGATAACAA
TAGGCAGACACTGTCCTGATATGAAATATGTGTCTCATATGAAACGGGAA
CACTTATGTAAAAATAAAACCTTTAAAATAATTACATTTTNCCAGATGTC
TTCTGAGGTTGTGGATAGTAATCCATATAGGTATATTTTATTATTTCATC
TTGTCTTTCTATCATTAATTTGTCTTATAATTTAGCATATTTTGGTGCAC
GTGCTACTGTACTTGATCAGTTTTGTTTTTAGGAAGCTCTAGTCTACAGC
TATTGGCTTTTATAGTTATAAATAAATTTTTGGTTAACGTGTATGTCTGT
TTTCTTCAAAAGTTGTCTTATGATTGTGACTATCTTCTGGGTTATGTCTG
TTTATAACCTTAGTTAAAAATCTATTATCAATCCTTACAACACTATGTTT
TTTTTTATAAATTGTGATTAGTTTTACTTCTTTAGTTGTTCTTTTTCTTC
AATTACACTCGACTTTAAAAATCATTAGAGATATTAGCACAGTTTAGTGG
CCAATATACCCAATATACTATAATCCTGTACAATTTTGTGATGGTTCAAA
TTTTCTCGCAAAAAGGAATATCAGAGACTATATCAGGCTTATACTTTGTT
AAAATTATAAGAACAATCGAGCTCTAGTTTTTTCATTTCAAGATAATCCA
CTTTTTTGTTCAAAAAACTCAACATAATTTTTTTTTAACTTTCAGTCGTT
TGATGGCTCTGAAAAGGATGGGAATAGTTGATAATTATGAGGTAGGGCAT
CATTTAAAAAATTTATACGTCAAAAATAAAATGTATAAAAGGAACCAAGA
AATTAAATTTTATATAACCTTGCTATACATTCTTTTCAGTTTTGATTATT
TGTCATATTTGCAAGAAAAATGTAGAAATGTATAAAATCGGAACACGAAA
TGATAAAAACGTTTTCTAAGAAAGTGGGAAAATATTGATTTTAAGTCATG
TGGCTTTTTTATGATCATATTATGATTTAGTCAAACATACAGCAATGCAC
AAAGTTCATTTGTCTCGTCTTTATCATTCCGTTCTTCACAATTTGGAGAA
TCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCTTCTGAAATTATTGAAA
TTCTAATTTAAAGATCCAAATTTACAAAAAGTTATTCCCCTCTTTTTCAG
CGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGGTGTGGGCAG
TGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGGTAACGTAAT
GTGTTTTTAGGTTAGATATTAAAAATCAAATATATAAAAACAGCTTTTAA
TTTACAAGCTATTTCACATTGGATTGGCACAGATGTGGAGCAAGATGATT
AGAAAGAGGGGAAGAAAAACAGTTTTTATCAGCATAGTATAACAATAGGC
AGACACTGTCTTGATTTGAAATATGTGTCTCATATGAAATGGGAACACTT
ATGTAAAAATAAAACCTTTAAAATAATTACATTTCGATGATAACATTTTA
AAGGTCGTTTTCAGGTATTCAATCATCGAATTTTAGATTTTTTACAATTT
TAGATTTTATGACTGGGCTAATCAATAACAAATTTAATCGAGGTGTTAAA
TTCTTTTTGGAAGCTCTCAATCCCCTAGACTTTGATAAATTTATTACTGA
TCCCAGCATTTCCAAAGAAATACTGAAAATACTCTCAAGCTATACTTTAA
CTTTTCCTCTACTTTAGCTAATTATGTTTGATTATGACAAAGTAGAACTT
GCAAATATGAACAGGTATGTCTGCTTTCTAATCAAAATGCAAGGTATATA
CCCCTAGTCTCTTTCAATTTCTATCTTTTAAAGTTAAGTATCCAAGGTTG
CAGAAAATGGTTGCTATCAACTTTTTATCAGAGTATTTAACTTTTCTTCT
GATTCTAGACTGTTTTTTCGACCTGATCAATCTGGGATGAGTAAAGTTGA
CGCAGCTGTAAATACGTTAAGGTTTGGAATTTTTTATTGAAGACCAAAAT
ATTCTATCTGTACTCATGGGTAATCACCTCATGTTGGTTAAAATTTTGGA
GGTTTTTGCGTCTAACCAACAGCAAGCCGTTATGAGGGCGCAATCAGTCC
TGATTACTAATGATTCATTTGAAATGATCCTATATTTTTCGTATATTTTT
CATGATTCAGCACTACTATAGGCTGCACGCAGCCCCTCTGATATGTTTTG
ATATAGGGGCTGAGTGTCGTGTATGAAATCCTCCTCCGAGAGTTACCCCC
GTCTTTGTGTTTTTGAATTTTAGAAACTTGATTAGCTTGTGATTTTCAAT
ACCCGTCGCCGAAAAAAAAATCTCATCATAATTAAACTTCTTATACGCCT
CAAAGAGTTGAAAAACCTCTCTAAATAATCGAAATCTCATCGTTTGACTT
TTAATAACAGTATTTTTCATTCCCTGTTTTTAGGGATATAAACCCTGATG
TAGAGTTCGAAGCACACAATTACAATATTACAAGTGTAGATAATTTCAAT
CATTTCATGGGCAGAATAAAGTAAGATAAGTATTGATTTATATTTATTTA
TTTATATGTTGTGTTTGTTTTAAAATTTTGTTTTGAAACACCAAAAATGG
TTTTTAGTAATTCTTTTCCTAGGCCCTTAAATCTGGCTAAATGTTTTATC
TGAAATGGTCAAAGTACACTTGACACGTTTTTTTAGATCAGGTGGCTTGA
ACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAATTTCGAAGCA
AGAATGGCTATTAATACTGTAAGTAAGATCTATTTTTCTGTTCTAGTTTT
CCATCGTTTACCCCGTGAAATTAAATTAATTAATATTTCTCGTGAATTCC
CCTTTCAAAAGGTACTCTGGGCTTACAAGACTTCTTCCGTCTCCAATATT
TTATAATAGGAATAAAATTAAAATATTGTTTTTAAGGCGTGTAATGAAAT
CGGTCAAGCATGGATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGAC
ATGTTCAAGTCATATTACCTGGTGAAACAGCTTGTTTTGCTGTAAGTAGT
CTATATGTCACCATCTGCACAGATATCTTATTTAAAACACTAGATGGAGC
CACTCTGTTGCTGGCTGAAGTAAAACAATGCACAGTATTTAAAAGTAGAC
CACAGCAACTGTGCTATTAGCCAGGAGTTTGACCATCTACCCATTCCATG
CTCTGTTTGCATTTCTCGACTTCAATTATTGTGAAGTCGAACAAAAACAT
CTTTTTCTTAGCACTACTGAAAAAGGCCAGAAAAGGCTCGATTTTGGTCA
AGATAAGAACATACATGGCGCGAGGATCATCGCCCCAGAACAAGTATCGC
GTTTTCGACTAATTTAAGCCTTTTACCTGCTTTTACAAATATTTGGAGAT
ATCGATGTATTTACTTGAACTGTCGTTTGATCGAAGACAATTAGTCCAGA
ACTCATACCTAAAAAGCCTTGGGGCGTTTTATGCCTAAATTACTTATCGG
CCTTTTTACGCAGACCCTAATTTAGCGCCGGCCCCTATTAGGCCAAAGCT
AAATTTTTAGCCCGATTCCTTACGCCGCCCCCTATTACGCCAGTGACGAA
AAAGTAACGCCATTAAGGACCGGATTAAGAAATGGCTGATAAAATAATAA
TGATAACTTGTAATTTCGATTTTTAAAAGACAGTTTATATTGATTGTCTT
TGGGACATAATGGTGAATTCTTGATTTATTTTTACTAGTGTGCACCACCG
TTAGTAGTGGCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGT
ATGTGCTGCTTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCG
TACAAAATACACTAAAGTAAACAAGTTTTCATCTTTATGTTTCTACTGTA
AATTTTAAGTTGAATCGTAGCTTTCTAAAAGTTTTTCACCTTTAAATATT
ACTCCCATAAGTCACTGCACGCCTACTAAAGTCTGTTCACGATAAGTGTG
CACTCTTTTTTCTTTTATCTATAACTTTTGAAGGAATTCTTCAATCTTTA
TAAATTTGGTATTATTGGAAAGATATCAGTGAGTGGAACAATTTGAAATA
AAAAAATCTTTTAAAAAATTCTAAAAATGAAGATGAAAATGAAGAAGAAA
AAAATGAAGATCTTATAGAAAAGTGCTATAACTGTCATTTTCACTGAAGT
GAATCCTTGATCATCGAACATTATCACTGAAAAAATTTCTCAAAAATAAT
TATTTTGTCAAAAGATATCAAACAAAGTTATAAGCTGATTGACGTCTAAA
AACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGGGGTCAATCACTTATTAA
CTTTGTATCATAACTTTATATTGAATGAATATTCTAGTGAAATTTCTTCA
CACTGATAACCTCCTAAGATCAAAGAATCTCTCCAGTGAAAATGAAAGTC
AAAGCCCTTCTCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCCT
CGTTTTTAGAATTTTTTCAAAGATTTTTTTATTTCAAATTGTTTCACTCA
CTGATATCTTTCCAACAATACCAAATTTATAAAGATTGAAGAATTGCTTA
AAAAGTTATAGGTTAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACT
TTAGACCTGTAGATTTGGAATGCCATGAGTTGAAGTAATTATTTTTTCGC
CATTCAATGACTTATACATCTACTTATTTTTGAATAATTGTAAAAAACCT
TGGACCTCAAAGAATATTATTATAGTGTGTTTATATTTTAATGACCTGTT
TAGTTGCCTTGAGAATTTATTAGCAAATAATTACCATAAGCAGTACGGCA
CGATATCCTATATTTAAGGACCTTATATTTTTAGAACCGTCCTTATATAG
GGATGTCCTTATATTTAAGGACCTTTTTTCTACTGGATCGATAAAAACCC
GATCTAGTAAGCAAAGGTCCCTATTTATGGGGACGTCCTTAAATATAGGT
CCTCTCCCGTACAGATAAGGGAACTAATTTAGGCGAATTTGGCGAAATAT
TCAACCAAAATTGAAATAATTGCTGGCTCTGGCTTTCAGTGTAAAGAAAC
TGATTTGCCATACCATTCGCCAAACTTAGTTCTCGCCAAAAATAAAATTG
CGTTTCTCATCAAAATGATTTCTTTTTAAAAATTTCCCGGATACTGTTTT
CCGATACCCTTCACACGTATTGATTTCTCTAAAATGGTGGCTTCTAGGCT
ACGCCATCTTCCTTCGTTTCGAGCGTAAAACTTCTACTCTTCGGGATATG
CTCGCAGCTCTTGTTTTGAATATTTCTCCGGATACATCGCATGCGCACTG
AGGTTGTAAAGGAACAATCGAGAGTTTCGAAACCTAAACCAATCAGCTGT
GTTTCAAACATTCTTTTATTTGAAACCTCTATTGATAAACATCTTTTGTT
AAAGTTTTCTATTATTTTTAAACCTAGTAATAAGCGAATTTCCGGTGGGG
GTCACTAGTTGCCTCCCATAGCAGTGCCTATAGACCAAGAGTAAGGCCTA
AAAGCCTGTAGCTGTCTATTGTTTAGACTAGGTTGCTTTTCAATCACAAG
ATAGTTATGATATATCATTGATTTTCAAATTCTTGTTTGCATATCTTTTC
AGATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGGTTACAACGC
AATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACCCGCATTGTG
ATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGTGAGCCAGGGC
GACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGTCCCCTAGAAAGGAGGGT
ACTTAAAATCTTCCAAAAATAGGCCTTATCGAAGTTTTTGATTTTTCTAA
AAAAATCGATGCATTGTGGGATTTTTTCGAGTGTATTACAATAGAAATCT
CTTAGGAATTCATCGAGGGAATTCTATTGTAATACACTTGAAACAATCCC
ACAATGCATTGCTTTTATAGAAAAATCAAGGTCTATTACTAAAAGGCAGG
GTAAAGAACAAAACAAACTGTACCAAAGATTGTTATTTTCGAAAGTCTGT
CCTTTTGGGATCAAAAAAAGCTGGAATGGATTTTTTTGGGGGTAGGTACA
TTATGCACTAAGTGGAGATTTAAGTTGTAAATTTATTAAGGTATGGATGG
ATTTTTCAGGGAAACCCAACTACGCACAAAGGGGAGTGTTTCTACGGAAA
CTGTAATTTTTCAACAGAATGCTATGATAGAAAAGAAATTCATGATATGC
ACCATTGCAATGTCTTCCATTCCACCCAATAGCTGATTGGTTGTAAGTGA
CGTATTGACTGATTTTACGTCACTTACAACCAATCAGCTGTTGGGTCCGT
GATGTAATGTCAGAAGACATTGCAGTGGTGCATATCATGAATACCCCATT
TCATTCACAGTCGAAATGAATCATGGGTAATCAGGACCACCACGCTCCGA
TAAGGACTTTCAATTGGTCTAAATTTTAGGATGTTTTTGTGTCTAGCCAA
CGAAAAGCTGTTATGGAGGCGCAATCATTCCTGATTACCCATGATTCATT
TAGACTGTAAAATGGCTTAGAGAGGCCTTTAATATATCCTTTTCTAACTT
TTAAACATAACTTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCA
AAACAACCGAAGGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGT
TCACGAAGATAATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAA
CAATAGCAAAGACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACAT
TCTTCTGATCGTTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTT
TTCCTATGTCTGTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTA
AACATGGCAAACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATT
CCAAAATTCATTGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGAT
AAACGTGAGATACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTT
TAATAGGATTTTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAA
GACTCTTTCTCCCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTT
GCTAAGCATCAAGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGG
TATGATCCGGCTGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGT
GCTCTACCACTGCACTACGGTCTGAATAAACTGAAACATATTTAATGTAC
CTTTTACTTGCACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGT
CATCCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTT
TCGTACGCATATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCT
GACAAGCTTGATAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGA
AATGCTTTGTCAAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTT
TAAAGTGTATGAAATGATAAACAAAATTTAAACCTTTCCATATTATGTAA
CCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACT
AAAATCCAATTAAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGT
GGGTTCTTTGTTTTGTAAAATTCATGATATGTACCATTACAATGTCTTCC
AAGTACCCATTAGCTGATTGGTTGAAAGTGACGTAAAAAGACTAAATTGA
TTGATTTTACGTCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAAT
GTAAGAAGACATTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATC
TAGGACGGCAGGATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCG
CAGCTAGATTCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTTTTTTATTCTTT
ACTTTACCTCACAGGAGAAGTTAGCAACACAACCGAAGGAAGAAGGCGTT
AAAGAAACTGAAGAAGAAGAAATTGTTCACGAAGATAATGAATGGGGTAT
GTAAAGTCTACTTCACTAGCAGGGAACAATAGCAAAGACTGTAATACTTT
CGTTATAGTTTGTATTTGAATAACATTCTTCTGATCGTTGAAAATATTTT
TGTAAGACCTTTGAAGTAAACCATTTTTCCTATGTCTGTAAATATTAATC
TGTGAGTTCCCACGCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTC
TGTACACCCAGTATCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGAT
AAACGTACTCCGTACTACGAAGCGATAAACGTGAGATACACTCTGGTACA
TAGTAACTGCTTCTATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAA
AAATCTTTCCGAAGATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCT
ACCTACCCTTAATCATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGT
CAAAGTACCATTTTGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACC
CACAACCTTGCGCACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTG
AATAAACTGAAACATATTTAATGTACCTTTTACTTGCACTTTTTAATCAC
CATAGGTATTTCATTGGTCGACGAGTCATCCGATTTACGGGAGGACACAC
AACTACAAGAATTGACTACTGGACTTTCGTACGCATATACTAAACCTGCA
GTGAGTCCTTTCTATGTATTAATGCTGACAAGCTTGATAAGATACTACCA
TTTTTAATAATTTATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATT
CAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAA
AATTTAAACCTTTCCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAA
AAAGGCCAAAGCCAAAATCTCCAACTAAAATCCAATTAAAAATGTCGATG
ATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCA
TGATATCTACCATTGCAATGTCTTCCAAGTACCCATTAGCTGATTGGTTA
AAAGTGACGTAAAAAGACGAAATTGATTGATTTTACGTCACTTACAACCA
ATCAGCTGTTGGGTCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCA
TATTATGAATAGGGACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAA
TGCCCTTGGGATTGATATGTGGATCGCAGCTAGATTCTATTCTTTTCATA
TCAATTTTCTCATGAGAATAGTGAATTTTAATAGGGTAATTTTCAAATCT
CAAGACGATATGAAAATTCTTTTCTGACGTCGTCTTTGAGAAGATGGTAA
AGGAAGAGTGCAATAGTTTTTAATGATATGAATCACTAGAGAATTATAAC
GTGATCTACAAAAAAATTGACTATATTTCAAATTATAGTTAATTCTAGAT
AAAATCGGATAAAATTTGCCGTTTGATTTAAGATTTACTTCACGTCCCTA
AAGGTCCCTAATATTGTGTCCGTTACAGACGGAAATTTGATCCGAAGATC
TTATATTTTCGGACAGAGCTTGTTTTTTCGGAAAATGAAGTTAATTCCAG
ACTTCTTTTAAGATGTCTTACTTTAAAATATCAACCGAACTCTAAAGCAA
AAACTAGAGCGTACATTTCTATGGAAATTTGGAAAGTTTTTCTGGGTAGT
GAGAAAGTTGAGTAGCATTACAGTACCTTTTATATAAGTTCTATAAGTTC
TTTCTTTATCCCATAGGAAACAACAGAAGAACAGACTGAACCAGCCTCTA
CGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGATTTAATG
AGACAAATGAAACAAATTTAGTTCTTTTTTAGATTTAATTTACGAAAAAA
TCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGTCTCTTCTTTATTTTTTT
TTGCAAAAATCAACAGAAGCGAGGCGTGATCTTCTAGCTTTGAACAATTC
ATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAAGTCTTTGAAATCCGACG
TCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAATAATTATTGAAT
TTGAATTTTTGAACCAAATTTTTAAATTTCTTTTTATTTTTTATGTACTT
AAGTGGTATAAATTTTATTTATTATACAATACTGAACAATGAAATTAAAA
CAGAAAATCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_007592	XLOC_007592	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000170	supercontig	sc0000170:49107..61016 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	10.4927	7.20613	14.1308	20.2955	1.25111e-05	0.00187574	0.00588379	0.0144758	5.26773e-05	1.13067e-05	0	0	0	0	0	0	0	0	0	0	0.0246801	8.4561	0	0	0	0

Blast

[Close]

BLAST of TCONS_00013589 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 468.003 bits (1203), Expect = 1.900e-161
Identity = 259/376 (68.88%), Postives = 306/376 (81.38%), Query Frame = 2

Query:   44 REKIAQMSSEVVDSNPFSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLAKQPKXXXXXXXXXXXXXXXXXXWGISLVDESSDLREDT---QLQELTTGLSYAYTKXXXXXXXXXXXXXXXXXXXXXXXXSLEDLMRQMKQI 1159
            R +I +MSSEVVDSNP+SRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK       EEEEI+HEDNEWGI LV E S+         + +L  G++ AYT        + +  S T  T E   +SLEDLM +MK +
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK--QEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYT------IPKKQEDSVTELTVEDSGESLEDLMAKMKNM 404

The following BLAST results are available for this feature:

BLAST of TCONS_00013589 vs. Swiss-Prot (Human)

BLAST of TCONS_00013589 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBA5	1.900e-161	68.88	Ubiquitin-like modifier-activating enzyme 5 OS=Hom...	[more]

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TCONS_00013589 (transcript) - C. hemisphaerica