TCONS_00013398 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013398
Unique NameTCONS_00013398
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4773

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013398 ID=TCONS_00013398|Name=TCONS_00013398|organism=Clytia hemisphaerica|type=transcript|length=4773bp
AATCGATTAACGTCTCCGctgtgaagaagaagaagaatcatACTTTTCCT
TTTTGGAGGGACCGAATACTTCTTATTTCTTGGATTGTGTTTGAAAAGGT
TTTCTATCGTCATGAGGATTTTACTATACtttctttatatattttatttc
acTGGAATTTCTAGACTTAGAAAACAAGTTTGTGATGTTTGACTGTCACT
TAGGATTTTAAAGAACACAGactttataaagaaaaatttagttATGAACT
GGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGTTATGACT
TCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGT
TATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGAAATGATT
ATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCACGACGAT
ACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTT
ACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTT
TGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATTATATCAA
TTTGAATCAACATTTAGTAGATTGAAATGGATGTTATCAAACGATCGACA
ATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTATCAGCACAGTATCCG
CAATATTCAACATTTTACGGACCAAAAACCTGGCTGTACTCATCGAAGAT
AACTACTGTTCGAATTTTTTAATGAGGGATATTCAAACATCTTTACTGAT
GCTAAATGGTAATAAAACAAAGACTATTTTCAATCCTATTTATGTTGGTT
TGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAATTCTATGATCTCTTG
GTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAACGTGACCTACACAA
ACACGTGTTCAAAATGGCggcatttttcagtttgttGGGACCACATCAAC
GTTGGTtgataccaaattttgatcaaaatgaacCTTTAGGGTTTGGTAAT
GTATTACCAGGACAGATATTATCTTTCCAGTTGAAGACAAATGACAATTT
TGGTGTGACGAAGTTGGCCGATGTTGTTGGATGGATATCTGAAACCTTCC
AACATTTTCGAAATGACCAATCACTGATCCACAAAAGTTCCATTCTGTAC
TCAACACTGATGAGAAGGATGTACCATTCCAATATCCAATATCGACAATC
acctttagaaatattttactaCAATGGTGAAAATCAAGGCGAATGGCAAT
CCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTTTATGGCGATGTA
TTGAATATTCTACGGTCATCTGAAACAAATAGTCTTACAGATCGCATACG
TATAGTCACAATAAACGATGCTCCGTATACTTTCGTTGATGGCAAATTTT
ACGACGCCGATAATGATATGTGTTCCGACGGTTTCTTATGTCAAATTCCG
ATACAAACGGATAGTTCCAGGCAACTTAATTACCAAAAGTCTTGTTGTAT
CGGTTTCATACCGGATATTTTCCGCATGGTCATAAAGAACGTTGCTATAC
CGTTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCGGATTCAAGAAC
GGTACGTGGAATGGAATGATCGCGGATGTTGCTTACGGGAAAGCGGACAT
GGCGATGGCTGCCATCACCATCACGAAAGAACGGTCAGATTCTGTATCTT
TTAGCGCCCCATTCATGTTCGACCAAACGGGAATCATAACAAAACCAGCA
GTGGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCGCCTCTTTCCAA
AGAGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTGTATGCTGTTGC
TttacttctttgaaaatacaataTACTTTTACATTTATCACCACCATGGG
TTCAGTCATAAAGCGTATTACTCATTCCTCGAAGGACTTTCTCACATCTC
TGGTGTAACTTTACAAAGAGATCTTGGCGGGAAACATCCTTTACGCCCAG
CCGCCCGTATCATGTGTTTGTTTTTTGCTATTGGGATGGTAATAATTGTT
TCGACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAGAGTAAAGAGAG
AGAGCCTCTACAAGGAGGATCACAAGATGTTAGATTCCGGAATCCAACCA
ACGAATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTCTTC
AAAAACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACC
GTACAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGTA
CTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTATCA
AAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTTCTT
TGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGATTA
ATCAAGgcattttgaaatttaccaGTAAAGACATGATAGCAGAGTTACAG
GCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAGCAA
TACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAGCGA
TGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGGTGG
AAATATTTTCATGAGAAAGTCTTGAAACtgatgaaaaggaagattttaaa
aAGTGAATTGAAAAGTCCGGTGACGTAAAAATTGTCGTGGAAGATTTTAA
Actggaaatttaatttctgaaagacaatagaccttttcataaattacgaa
catcacttgcctcgcattcaaacaattaccatggtgattatgtctcttga
tACATTATGATGTTTTAATGAataaaaagtagttttaataaaatccgctg
ggagttaatcgccatggcaataatttcaaaacgaggcaagtgatgttcgt
aaagTAATTTTCGAAAATGTCTATTACCGGCATCGGAAAGAAGGATATGG
AAAAGTTCTAATGGGTCCAATACCATAACAGAGATGATTGaaactaatga
tgaaaaaaatattttattcttcAAGAAGAAGCCCGGTACCATGTGCGTAT
GTGGAGACAAAAATTAGGGTGTCAAAATTGCGTACCCTAGCAGTGCAAAG
AAAATTCTgtcaaatttgagtaaatttggatGGACAATCGACCTCCCGGT
GCAATTCCTTGAATATTTTTGTACAAATAGAATTGGTCAGATGTCAAAAA
ATCCCCGCGCGTGTTCGATTTCGAGTTACCAAGACTCTACTGTATCAAAA
CTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGG
GTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGAGTTATCGAGACT
CTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAA
AACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACTTGTTGACT
GAGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGA
CTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATC
AAAATTTGTTGACTGGGTGAATGATGTAGATTCGACATGAACACTGCTCT
CTATATCAACTAGATTATGAAGACATTTTAGCTGATGAGGGTTTTGGTGA
CAAAAATGAGTCAGCTCAGTTCTTTTTCTCGTGATGACCGATTAGAAAGT
GTATTTGTATTTCAGTTCACTACAAcgcaaaatactaagaacaggacgaa
aaatataaaaacagaaATGGTACAATAACATTGAAACAACAAAAACTACA
TAACCTTCGATCCATTAAAAGTACTCATTTTTTACAAGCAAAATTATCAT
AAGGCTTAAGGCTCAGGCCTTAAAATCTATACGAGTCTTTAAGTCCCTTA
GCCTCCAGAGCTATATGTATAAAAATGGTCAATTTTGATAAGACCTTGGC
ACTCATCCGTTGGATCgaaagttgttttttgaaataaagctTTGAAGGAC
AAAAAAACGTTCAATAAATAATCTtaatcttatataaaaaataattcaaa
ttctaaAGAATATTCCAGTATCATAAAATTAACTCCCTAACATAATacac
gtttctttataagaacatccaacatttttgaagcctttggacgttcttaa
ctttttgagttttaagcctaaaaatgttctcaacatgttcttattttcac
cattttttgagcattttttgactatttttctaAGAGATCAGCTATTTTAA
TGTCGGCAAAGCctcagaatgttcttaacttgttcttaacatttcggcca
tcgaatatgttcttatattgtttgttcttataaagaaaaacgtaTAGTTA
CATAGCTTCCTAAATATTTAGTATTTAGCTTTTAAGGTATACCTAGACAC
CTAGTTACTCTCTCAACTACCCAAATAAATAGGAAATGGAAAAATCGTTA
TTCCAAATACCACAAAAGGAAATATATAGACTtttcagaaaatattttca
aaaagattgaACGGGAGATTTTTATTGGGCAAAATGTGCACTTTAGACAA
ATGTCAGCATCTTCCAATATAGAATACGTATGAcgtaatgggctcttcca
aagAAAAATCCACCATAAGGGGAGGATGATATATTTTCCTGAGAAATTTG
ACAAAGGGTAAATTAAAgtgtcc
Run BLAST on NCBI

protein sequence of TCONS_00013398-protein

>TCONS_00013398-protein ID=TCONS_00013398-protein|Name=TCONS_00013398-protein|organism=Clytia hemisphaerica|type=polypeptide|length=844bp
MNWIYFTKMDINVCLTVMTSWHLAYGQRLLVFYENVIFDYDGPTFNGDIR
NDYRFSSKNKTSFIRYHDDTLEHCQDIWRNLSFNSLQKDYDGIISLTKSQ
NLLSKQLSSSNEVLDILYQFESTFSRLKWMLSNDRQYYSCVWLSPLFIST
VSAIFNILRTKNLAVLIEDNYCSNFLMRDIQTSLLMLNGNKTKTIFNPIY
VGLAPHQEARNRDQFYDLLVEGQTDFLMLLQRDLHKHVFKMAAFFSLLGP
HQRWLIPNFDQNEPLGFGNVLPGQILSFQLKTNDNFGVTKLADVVGWISE
TFQHFRNDQSLIHKSSILYSTLMRRMYHSNIQYRQSPLEIFYYNGENQGE
WQSNQGFMRDNKLTFYGDVLNILRSSETNSLTDRIRIVTINDAPYTFVDG
KFYDADNDMCSDGFLCQIPIQTDSSRQLNYQKSCCIGFIPDIFRMVIKNV
AIPFEMYVVADGKYGGFKNGTWNGMIADVAYGKADMAMAAITITKERSDS
VSFSAPFMFDQTGIITKPAVVELDFLNWEFLAPLSKELQIYLVILVVVCM
LLLYFFENTIYFYIYHHHGFSHKAYYSFLEGLSHISGVTLQRDLGGKHPL
RPAARIMCLFFAIGMVIIVSTYTAVLAAQSLKSKEREPLQGGSQDVRFRN
PTNEFRFGILRDSSYESFFKNGETDLLKRMSVFMEPYNYDTLAEGMDMVR
NGTLQASFSDFAFLHFYLSKDRSCQLKLVKDKLYFFGLGFPMAKDFPYRE
LINQGILKFTSKDMIAELQAKWFDNICQPNFFVTSNTQLSIKFFGGLVFI
LAMTIIGALLFLYPEHLWWKYFHEKVLKLMKRKILKSELKSPVT
Run BLAST on NCBI

transcript from alignment at sc0000167:418518..426200+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013398 ID=TCONS_00013398|Name=TCONS_00013398|organism=Clytia hemisphaerica|type=transcript|length=7683bp|location=Sequence derived from alignment at sc0000167:418518..426200+ (Clytia hemisphaerica)
AATCGATTAACGTCTCCGctgtgaagaagaagaagaatcatACTTTTCCT
TTTTGGAGGGACCGAATACTTCTTATTTCTTGGATTGTGTTTGAAAAGGT
TTTCTATCGTCATGAGGATTTTACTATACtttctttatatattttatttc
acTGGAATTTCTAGACTTAGAAAACAAGTTTGTGATGTTTGACTGTCACT
TAGGATTTTAAAGAACACAGactttataaagaaaaatttagttATGAACT
GGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGTTATGACT
TCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGT
TATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGAAATGATT
ATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCACGACGAT
ACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTT
ACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTT
TGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATTATATCAA
TTTGAATCAACATTTAGTAGATTGgtaagaaaacttttttatggaaatcA
AATTTCATCGACGTTTTAGATCACCTACaccattttttattgaaaaactt
atGTTCTTCCCAAAAAGACTTTTCAGCCTTTCAGTACTACTTAATTTTAA
AGCANTATTGAAAAACTTATGTTCTTCCCAAAAAGACTTTTCAGCCTTTC
AGTACTACTTAATTTTAAAGCATCCACTGATCAGGTAGATTTCCCCCAAG
TGGAATTTtttcacacccctgtgtcacagacccactggaaagtttggcaa
agatttcgtccccggtgggaaaaaaccttgcaatttcagccccacttgga
GATTGACTTGATTTCGTCCCAATTCGAAATTCcaccccactggatttttt
aaccttagaacaatagaatgttaatcatcattggaatttcaataggaatt
tttatccccaaggaggaaaaagttccaccggggctgtgagacaggttTTT
TTCTCTCCGTTATCCTTGCTCTGCCTGCACTCtcgctttttattaatttc
ctttttaagactaaattttgacaatttttggtCGAGTTGTTTGCCTTCTT
CCTAAACCTTTATCTTTTTATTATCTCTGACATCAGCTGGTATTCTTGAC
TTTATCCTTCTAGAAATATGAAACTTTCGTAAAAAATAGTGTATTTGCTA
CCAAAAAGCATTCCCCCTGAGTTATACTCATTTTATGACCTCTACAGAAA
TGGATGTTATCAAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCC
TTTGTTTATCAGCACAGTATCCGCAATATTCAACATTTTACGGACCAAAA
ACCTGGCTGTACTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGG
GATATTCAAACATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTAT
TTTCAATCCTATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATC
GTGATCAATTCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATG
CTTTTGCAACGTGACCTACACAAACACGTGTTCAAAATGGCggcattttt
cagtttgttGGGACCACATCAACGTTGGTtgataccaaattttgatcaaa
atgaacCTTTAGGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTC
CAGTTGAAGACAAATGACAATTTTGGTGTGACGAAGTTGGCCGATGTTGT
TGGATGGATATCTGAAACCTTCCAACATTTTCGGTATGAAGACCATATTT
TTGATTCCCTCTCTTTCTTTAGATGATCCTATCGTCTAGAAagacattgt
gacgtgccgtggcactcataaggttcgAATTTCCAgggttgtttttcatt
tttccaagggggttaaaagttattctaaaattttcagagGCAAAAGACTT
TTTTTACTTCGTCCACTCTCACGTCcattaaaagaatttttccaaggatg
tttttgcaaattttgccattttcagNTTTTTTaaccttagaacaatagaa
tgttaatcatcattggaatttcaataggaatttttatccccaaggaggaa
aaagttccaccggggctgcgagacaggttttttttctttccgttATCCTT
GCACTGCCTGCACTCtcgctttttattaatttcctttttaagactaaatt
ttgacaatttttggtCGAGTTGTTTGCCTTCTTCctaaatttttatcttt
ttattatCTCTGAATCTCTGACATCAGCTGGTATTTTTGACTTTATCGTT
ctagaaaaatgaaactttcgTGAAAAATAGTGTATTTGCTACCAAAAAGC
ATTCCCCCTGAGTTATACTCATTTTATGACCTCTACAGAAATGGATGTTA
TCAAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTAT
CAGCACAGTATCCGCAATATTCAACATTTTACGGACCAAAAACCTGGCTG
TACTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGGGATATTCAA
ACATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTATTTTCAATCC
TATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAAT
TCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAA
CGTGACCTACACAAACACGTGTTCAAAATGGCggcatttttcagtttgtt
GGGACCACATCAACGTTGGTtgataccaaattttgatcaaaatgaacCTT
TAGGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTCCAGTTGAAG
ACAAATGACAATTTTGGTGTGACGAAGTTGTCCGATGTTGTTGGATGGAT
ATCTGAAACCTTCCAACATTTTCGGTATGAAGACCATATTTTTGATTCCC
TCTCTTTCTCTAGATGATCCTATCGTCTAGAAagacattgtgacgtgccg
tggcactcataaggttcgAATTTCCagggttgttttttcatttttccaag
ggggttaaaagttattctaaaattttcagagGCAAAAGACTTATTTTACT
TCGTCCACCCTCACGTCcattaaaagaatttttccaaggatGTTTtagca
aattttgccattttcaaggggtatcgacacattttcaataatttttttcc
accctcctgtatggttttttaatggagcAGCCCAATGACGGCCCCATTTT
GTAATTTGTTATTTATGCTAGAAATGACCAATCACTGATCCACAAAAGTT
CCATTCTGTACTCAACACTGATGAGAAGGATGTACCATTCCAATATCCAA
TATCGACAATCacctttagaaatattttactaCAATGGTGAAAATCAAGG
CGAATGGCAATCCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTTT
ATGGCGATGTATTGAATATTCTACGGTCATCTGAAAGTAAGTGATAATTT
TACTTACTAGTCTCTATATTTACCTTTCATCGCCTTAAAGCACACACAAA
TGTTTCAACCAAAGTGAGTCATCTTAAAATTATTAAAGACAGTGTTGTAG
GGTTTTCTGGGAAATTCTATTTGAATCTTTTTCCCCTTTCTTCTTTGGCT
TTTTGTTTtggatctttttcttttcttttcgctCAGCAAATAGTCTTACA
GATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACTTTCGTTGA
TGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGACGGTTTCTTAT
GTCAAATTCCGATACAAACGGATAGTTCCAGGCAACTTAATTACCAAAAG
TCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCATAAAGAA
CGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCG
GATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGCTTACGGG
AAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAACGGTCAGA
TTCTGTATCTTTTAGCGCCCCATTCATGTTCGACCAAACGGGAATCATAA
CAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCG
CCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTG
TATGCTGTTGCTttacttctttgaaaatacaataTACTTTTACATTTATC
ACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGAAGGACTT
TCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGAAACATCC
TTTACGCCCAGCCGCCCGTATCATGTGTTTGTTTTTTGCTATTGGGATGG
TAATAATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAG
AGTAAAGAGAGAGAGCCTCTACAAGGAGGATCACAAGATGTTAGAGTGAG
TATTTTATTCTAGTGAGATTTTGTCTGTTCTTTCCACTTTCAAGAAGTgg
tgtaaaataatttttttactatGAGAGAAACCTTTGGTCAGCTTATTCAG
CTTATCAGAGGtttcaaaaatgaatgaaattatGAAAGTGGTCAAATTTA
CTGTATCATAAACTTATCGTTTGAACCGTCACCGTGAATTTGTTCACTTA
GCTAAATATAAGCTTTAGATAGAGAAAattaatatttccatatttttcag
TTCCGGAATCCAACCAACGAATTCCGATTCGGTATATTACGTGATAGCTC
ATACGAATCTTTCTTCAAAAACGGGGAAACGGATTTACTAAAACGGATGA
GTGTGTTCATGGAACCGTACAATTATGACACCCTTGCTGAGGGTATGGAT
ATGGTGCGAAATGGGTGTGTATACTAAATATGAATAGCAAATTTCAACTA
TATCTTTATAGTagtcgagttatggagtaagatttATAAGGTATGGTTAA
CTGAAGGGAagagaaaatttgttcgagttagggagacattcgagttaaag
aggtcGGCCTTAATTCAACCACAAAATCATGATGTGTAAGTATTTTACTG
TATTTACGACTAAAGCATTATCATTTTGAATTAAAACGTTCATCAATATT
TCTTTCAGTACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTT
CTATTTATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAAC
TCTACTTCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGA
GAGCTGATTAATCAAGgcattttgaaatttaccaGTAAAGACATGATAGC
AGAGTTACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTG
TGACAAGCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTC
ATACTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACA
TTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACtgatgaaaagga
agattttaaaaAGTGAATTGAAAAGTCCGGTGACGTAAAAATTGTCGTGG
AAGATTTTAAActggaaatttaatttctgaaagacaatagaccttttcat
aaattacgaacatcacttgcctcgcattcaaacaattaccatggtgatta
tgtctcttgatACATTATGATGTTTTAATGAataaaaagtagttttaata
aaatccgctgggagttaatcgccatggcaataatttcaaaacgaggcaag
tgatgttcgtaaagTAATTTTCGAAAATGTCTATTACCGGCATCGGAAAG
AAGGATATGGAAAAGTTCTAATGGGTCCAATACCATAACAGAGATGATTG
aaactaatgatgaaaaaaatattttattcttcAAGAAGAAGCCCGGTACC
ATGTGCGTATGTGGAGACAAAAATTAGGGTGTCAAAATTGCGTACCCTAG
CAGTGCAAAGAAAATTCTgtcaaatttgagtaaatttggatGGACAATCG
ACCTCCCGGTGCAATTCCTTGAATATTTTTGTACAAATAGAATTGGTCAG
ATGTCAAAAAATCCCCGCGCGTGTTCGATTTCGAGTTACCAAGACTCTAC
TGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACT
TGTTGACTGGGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGAGT
TATCGAGACTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCT
ACTGTATCAAAACTTGTTGACTGGGTTATCGAGACTCTACTGTATCAAAA
CTTGTTGACTGAGTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGG
GTTATCGAGACTCTACTGTATCAAAACTTGTTGACTGGGTTATCGAGACT
CTACTGTATCAAAATTTGTTGACTGGGTGAATGATGTAGATTCGACATGA
ACACTGCTCTCTATATCAACTAGATTATGAAGACATTTTAGCTGATGAGG
GTTTTGGTGACAAAAATGAGTCAGCTCAGTTCTTTTTCTCGTGATGACCG
ATTAGAAAGTGTATTTGTATTTCAGTTCACTACAAcgcaaaatactaaga
acaggacgaaaaatataaaaacagaaATGGTACAATAACATTGAAACAAC
AAAAACTACATAACCTTCGATCCATTAAAAGTACTCATTTTTTACAAGCA
AAATTATCATAAGGCTTAAGGCTCAGGCCTTAAAATCTATACGAGTCTTT
AAGTCCCTTAGCCTCCAGAGCTATATGTATAAAAATGGTCAATTTTGATA
AGACCTTGGCACTCATCCGTTGGATCgaaagttgttttttgaaataaagc
tTTGAAGGACAAAAAAACGTTCAATAAATAATCTtaatcttatataaaaa
ataattcaaattctaaAGAATATTCCAGTATCATAAAATTAACTCCCTAA
CATAATacacgtttctttataagaacatccaacatttttgaagcctttgg
acgttcttaactttttgagttttaagcctaaaaatgttctcaacatgttc
ttattttcaccattttttgagcattttttgactatttttctaAGAGATCA
GCTATTTTAATGTCGGCAAAGCctcagaatgttcttaacttgttcttaac
atttcggccatcgaatatgttcttatattgtttgttcttataaagaaaaa
cgtaTAGTTACATAGCTTCCTAAATATTTAGTATTTAGCTTTTAAGGTAT
ACCTAGACACCTAGTTACTCTCTCAACTACCCAAATAAATAGGAAATGGA
AAAATCGTTATTCCAAATACCACAAAAGGAAATATATAGACTtttcagaa
aatattttcaaaaagattgaACGGGAGATTTTTATTGGGCAAAATGTGCA
CTTTAGACAAATGTCAGCATCTTCCAATATAGAATACGTATGAcgtaatg
ggctcttccaaagAAAAATCCACCATAAGGGGAGGATGATATATTTTCCT
GAGAAATTTGACAAAGGGTAAATTAAAgtgtcc

Coding sequence (CDS) from alignment at sc0000167:418518..426200+

>TCONS_00013398 ID=TCONS_00013398|Name=TCONS_00013398|organism=Clytia hemisphaerica|type=CDS|length=15210bp|location=Sequence derived from alignment at sc0000167:418518..426200+ (Clytia hemisphaerica)
ATGAACTGGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGT
TATGACTTCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACG
AAAATGTTATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGA
AATGATTATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCA
CGACGATACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCA
ACTCTTTACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAA
AACCTTTTGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATT
ATATCAATTTGAATCAACATTTAGTAGATTGAAATGGATGTTATCAAACG
ATCGACAATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTATCAGCACA
GTATCCGCAATATTCAACATTTTACGGACCAAAAACCTGGCTGTACTCAT
CGAAGATAACTACTGTTCGAATTTTTTAATGAGGGATATTCAAACATCTT
TACTGATGCTAAATGGTAATAAAACAAAGACTATTTTCAATCCTATTTAT
GTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAATTCTATGA
TCTCTTGGTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAACGTGACC
TACACAAACACGTGTTCAAAATGGCggcatttttcagtttgttGGGACCA
CATCAACGTTGGTtgataccaaattttgatcaaaatgaacCTTTAGGGTT
TGGTAATGTATTACCAGGACAGATATTATCTTTCCAGTTGAAGACAAATG
ACAATTTTGGTGTGACGAAGTTGGCCGATGTTGTTGGATGGATATCTGAA
ACCTTCCAACATTTTCGAAATGACCAATCACTGATCCACAAAAGTTCCAT
TCTGTACTCAACACTGATGAGAAGGATGTACCATTCCAATATCCAATATC
GACAATCacctttagaaatattttactaCAATGGTGAAAATCAAGGCGAA
TGGCAATCCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTTTATGG
CGATGTATTGAATATTCTACGGTCATCTGAAACAAATAGTCTTACAGATC
GCATACGTATAGTCACAATAAACGATGCTCCGTATACTTTCGTTGATGGC
AAATTTTACGACGCCGATAATGATATGTGTTCCGACGGTTTCTTATGTCA
AATTCCGATACAAACGGATAGTTCCAGGCAACTTAATTACCAAAAGTCTT
GTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCATAAAGAACGTT
GCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCGGATT
CAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGCTTACGGGAAAG
CGGACATGGCGATGGCTGCCATCACCATCACGAAAGAACGGTCAGATTCT
GTATCTTTTAGCGCCCCATTCATGTTCGACCAAACGGGAATCATAACAAA
ACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCGCCTC
TTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTGTATG
CTGTTGCTttacttctttgaaaatacaataTACTTTTACATTTATCACCA
CCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGAAGGACTTTCTC
ACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGAAACATCCTTTA
CGCCCAGCCGCCCGTATCATGTGTTTGTTTTTTGCTATTGGGATGGTAAT
AATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAGAGTA
AAGAGAGAGAGCCTCTACAAGGAGGATCACAAGATGTTAGATTCCGGAAT
CCAACCAACGAATTCCGATTCGGTATATTACGTGATAGCTCATACGAATC
TTTCTTCAAAAACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCA
TGGAACCGTACAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGA
AATGGTACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTA
TTTATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCT
ACTTCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAG
CTGATTAATCAAGgcattttgaaatttaccaGTAAAGACATGATAGCAGA
GTTACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGA
CAAGCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATA
CTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTT
GTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACtgatgaaaaggaaga
ttttaaaaAGTGAATTGAAAAGTCCGGTGACGTAAATGAACTGGATTTAT
TTCACCAAAATGGATATCAATGTCTGTCTTACTGTTATGACTTCATGGCA
TCTGGCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGTTATCTTTG
ATTACGATGGTCCAACTTTTAATGGTGACATTCGAAATGATTATCGATTT
TCGTCCAAAAATAAGACTTCTTTTATTCGATATCACGACGATACGTTAGA
ACATTGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTTACAAAAAG
ATTATGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTTTGAGCAAA
CAACTTTCATCTTCAAATGAAGTATTGGATATATTATATCAATTTGAATC
AACATTTAGTAGATTGAAATGGATGTTATCAAACGATCGACAATACTATT
CTTGTGTTTGGCTATCTCCTTTGTTTATCAGCACAGTATCCGCAATATTC
AACATTTTACGGACCAAAAACCTGGCTGTACTCATCGAAGATAACTACTG
TTCGAATTTTTTAATGAGGGATATTCAAACATCTTTACTGATGCTAAATG
GTAATAAAACAAAGACTATTTTCAATCCTATTTATGTTGGTTTGGCGCCT
CATCAAGAAGCGCGCAATCGTGATCAATTCTATGATCTCTTGGTGGAGGG
ACAAACAGATTTCCTCATGCTTTTGCAACGTGACCTACACAAACACGTGT
TCAAAATGGCggcatttttcagtttgttGGGACCACATCAACGTTGGTtg
ataccaaattttgatcaaaatgaacCTTTAGGGTTTGGTAATGTATTACC
AGGACAGATATTATCTTTCCAGTTGAAGACAAATGACAATTTTGGTGTGA
CGAAGTTGGCCGATGTTGTTGGATGGATATCTGAAACCTTCCAACATTTT
CGAAATGACCAATCACTGATCCACAAAAGTTCCATTCTGTACTCAACACT
GATGAGAAGGATGTACCATTCCAATATCCAATATCGACAATCacctttag
aaatattttactaCAATGGTGAAAATCAAGGCGAATGGCAATCCAACCAA
GGATTTATGCGTGATAACAAGTTGACCTTTTATGGCGATGTATTGAATAT
TCTACGGTCATCTGAAACAAATAGTCTTACAGATCGCATACGTATAGTCA
CAATAAACGATGCTCCGTATACTTTCGTTGATGGCAAATTTTACGACGCC
GATAATGATATGTGTTCCGACGGTTTCTTATGTCAAATTCCGATACAAAC
GGATAGTTCCAGGCAACTTAATTACCAAAAGTCTTGTTGTATCGGTTTCA
TACCGGATATTTTCCGCATGGTCATAAAGAACGTTGCTATACCGTTCGAA
ATGTACGTTGTTGCGGACGGGAAGTATGGCGGATTCAAGAACGGTACGTG
GAATGGAATGATCGCGGATGTTGCTTACGGGAAAGCGGACATGGCGATGG
CTGCCATCACCATCACGAAAGAACGGTCAGATTCTGTATCTTTTAGCGCC
CCATTCATGTTCGACCAAACGGGAATCATAACAAAACCAGCAGTGGTTGA
ACTGGATTTTTTGAATTGGGAGTTTTTGGCGCCTCTTTCCAAAGAGCTTC
AAATTTATCTAGTGATTTTGGTTGTGGTTTGTATGCTGTTGCTttacttc
tttgaaaatacaataTACTTTTACATTTATCACCACCATGGGTTCAGTCA
TAAAGCGTATTACTCATTCCTCGAAGGACTTTCTCACATCTCTGGTGTAA
CTTTACAAAGAGATCTTGGCGGGAAACATCCTTTACGCCCAGCCGCCCGT
ATCATGTGTTTGTTTTTTGCTATTGGGATGGTAATAATTGTTTCGACTTA
CACAGCCGTTTTGGCAGCACAAAGTTTGAAGAGTAAAGAGAGAGAGCCTC
TACAAGGAGGATCACAAGATGTTAGATTCCGGAATCCAACCAACGAATTC
CGATTCGGTATATTACGTGATAGCTCATACGAATCTTTCTTCAAAAACGG
GGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGTACAATT
ATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGTACTTTGCAA
GCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTATCAAAAGATCG
TTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTTCTTTGGCCTTG
GGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGATTAATCAAGgc
attttgaaatttaccaGTAAAGACATGATAGCAGAGTTACAGGCCAAATG
GTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAGCAATACGCAAC
TTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAGCGATGACGATT
ATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGGTGGAAATATTT
TCATGAGAAAGTCTTGAAACtgatgaaaaggaagattttaaaaAGTGAAT
TGAAAAGTCCGGTGACGTAAATGAACTGGATTTATTTCACCAAAATGGAT
ATCAATGTCTGTCTTACTGTTATGACTTCATGGCATCTGGCATATGGTCA
AAGACTTCTGGTGTTTTACGAAAATGTTATCTTTGATTACGATGGTCCAA
CTTTTAATGGTGACATTCGAAATGATTATCGATTTTCGTCCAAAAATAAG
ACTTCTTTTATTCGATATCACGACGATACGTTAGAACATTGTCAAGACAT
TTGGCGAAATTTATCATTCAACTCTTTACAAAAAGATTATGACGGTATAA
TTTCTTTAACAAAGTCACAAAACCTTTTGAGCAAACAACTTTCATCTTCA
AATGAAGTATTGGATATATTATATCAATTTGAATCAACATTTAGTAGATT
GAAATGGATGTTATCAAACGATCGACAATACTATTCTTGTGTTTGGCTAT
CTCCTTTGTTTATCAGCACAGTATCCGCAATATTCAACATTTTACGGACC
AAAAACCTGGCTGTACTCATCGAAGATAACTACTGTTCGAATTTTTTAAT
GAGGGATATTCAAACATCTTTACTGATGCTAAATGGTAATAAAACAAAGA
CTATTTTCAATCCTATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGC
AATCGTGATCAATTCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCT
CATGCTTTTGCAACGTGACCTACACAAACACGTGTTCAAAATGGCggcat
ttttcagtttgttGGGACCACATCAACGTTGGTtgataccaaattttgat
caaaatgaacCTTTAGGGTTTGGTAATGTATTACCAGGACAGATATTATC
TTTCCAGTTGAAGACAAATGACAATTTTGGTGTGACGAAGTTGGCCGATG
TTGTTGGATGGATATCTGAAACCTTCCAACATTTTCGAAATGACCAATCA
CTGATCCACAAAAGTTCCATTCTGTACTCAACACTGATGAGAAGGATGTA
CCATTCCAATATCCAATATCGACAATCacctttagaaatattttactaCA
ATGGTGAAAATCAAGGCGAATGGCAATCCAACCAAGGATTTATGCGTGAT
AACAAGTTGACCTTTTATGGCGATGTATTGAATATTCTACGGTCATCTGA
AACAAATAGTCTTACAGATCGCATACGTATAGTCACAATAAACGATGCTC
CGTATACTTTCGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGT
TCCGACGGTTTCTTATGTCAAATTCCGATACAAACGGATAGTTCCAGGCA
ACTTAATTACCAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCC
GCATGGTCATAAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCG
GACGGGAAGTATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGC
GGATGTTGCTTACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCA
CGAAAGAACGGTCAGATTCTGTATCTTTTAGCGCCCCATTCATGTTCGAC
CAAACGGGAATCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAA
TTGGGAGTTTTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGA
TTTTGGTTGTGGTTTGTATGCTGTTGCTttacttctttgaaaatacaata
TACTTTTACATTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTC
ATTCCTCGAAGGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATC
TTGGCGGGAAACATCCTTTACGCCCAGCCGCCCGTATCATGTGTTTGTTT
TTTGCTATTGGGATGGTAATAATTGTTTCGACTTACACAGCCGTTTTGGC
AGCACAAAGTTTGAAGAGTAAAGAGAGAGAGCCTCTACAAGGAGGATCAC
AAGATGTTAGATTCCGGAATCCAACCAACGAATTCCGATTCGGTATATTA
CGTGATAGCTCATACGAATCTTTCTTCAAAAACGGGGAAACGGATTTACT
AAAACGGATGAGTGTGTTCATGGAACCGTACAATTATGACACCCTTGCTG
AGGGTATGGATATGGTGCGAAATGGTACTTTGCAAGCTTCATTCAGTGAT
TTCGCTTTCCTGCATTTCTATTTATCAAAAGATCGTTCATGTCAACTCAA
ATTGGTCAAAGATAAACTCTACTTCTTTGGCCTTGGGTTCCCAATGGCGA
AAGATTTTCCTTATCGAGAGCTGATTAATCAAGgcattttgaaatttacc
aGTAAAGACATGATAGCAGAGTTACAGGCCAAATGGTTCGATAATATTTG
CCAACCGAATTTTTTTGTGACAAGCAATACGCAACTTTCGATTAAATTTT
TTGGTGGTTTGGTATTCATACTAGCGATGACGATTATTGGAGCTTTGTTG
TTTCTGTACCCAGAACATTTGTGGTGGAAATATTTTCATGAGAAAGTCTT
GAAACtgatgaaaaggaagattttaaaaAGTGAATTGAAAAGTCCGGTGA
CGTAAATGAACTGGATTTATTTCACCAAAATGGATATCAATGTCTGTCTT
ACTGTTATGACTTCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTT
TTACGAAAATGTTATCTTTGATTACGATGGTCCAACTTTTAATGGTGACA
TTCGAAATGATTATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGA
TATCACGACGATACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATC
ATTCAACTCTTTACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGT
CACAAAACCTTTTGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGAT
ATATTATATCAATTTGAATCAACATTTAGTAGATTGAAATGGATGTTATC
AAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTATCA
GCACAGTATCCGCAATATTCAACATTTTACGGACCAAAAACCTGGCTGTA
CTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGGGATATTCAAAC
ATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTATTTTCAATCCTA
TTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAATTC
TATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAACG
TGACCTACACAAACACGTGTTCAAAATGGCggcatttttcagtttgttGG
GACCACATCAACGTTGGTtgataccaaattttgatcaaaatgaacCTTTA
GGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTCCAGTTGAAGAC
AAATGACAATTTTGGTGTGACGAAGTTGGCCGATGTTGTTGGATGGATAT
CTGAAACCTTCCAACATTTTCGAAATGACCAATCACTGATCCACAAAAGT
TCCATTCTGTACTCAACACTGATGAGAAGGATGTACCATTCCAATATCCA
ATATCGACAATCacctttagaaatattttactaCAATGGTGAAAATCAAG
GCGAATGGCAATCCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTT
TATGGCGATGTATTGAATATTCTACGGTCATCTGAAACAAATAGTCTTAC
AGATCGCATACGTATAGTCACAATAAACGATGCTCCGTATACTTTCGTTG
ATGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGACGGTTTCTTA
TGTCAAATTCCGATACAAACGGATAGTTCCAGGCAACTTAATTACCAAAA
GTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATGGTCATAAAGA
ACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGC
GGATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATGTTGCTTACGG
GAAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAAGAACGGTCAG
ATTCTGTATCTTTTAGCGCCCCATTCATGTTCGACCAAACGGGAATCATA
ACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGC
GCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTT
GTATGCTGTTGCTttacttctttgaaaatacaataTACTTTTACATTTAT
CACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCCTCGAAGGACT
TTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGCGGGAAACATC
CTTTACGCCCAGCCGCCCGTATCATGTGTTTGTTTTTTGCTATTGGGATG
GTAATAATTGTTTCGACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAA
GAGTAAAGAGAGAGAGCCTCTACAAGGAGGATCACAAGATGTTAGATTCC
GGAATCCAACCAACGAATTCCGATTCGGTATATTACGTGATAGCTCATAC
GAATCTTTCTTCAAAAACGGGGAAACGGATTTACTAAAACGGATGAGTGT
GTTCATGGAACCGTACAATTATGACACCCTTGCTGAGGGTATGGATATGG
TGCGAAATGGTACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCAT
TTCTATTTATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAA
ACTCTACTTCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATC
GAGAGCTGATTAATCAAGgcattttgaaatttaccaGTAAAGACATGATA
GCAGAGTTACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTT
TGTGACAAGCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTAT
TCATACTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAA
CATTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACtgatgaaaag
gaagattttaaaaAGTGAATTGAAAAGTCCGGTGACGTAAATGAACTGGA
TTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGTTATGACTTCA
TGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGTTAT
CTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGAAATGATTATC
GATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCACGACGATACG
TTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTTACA
AAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTTTGA
GCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATTATATCAATTT
GAATCAACATTTAGTAGATTGAAATGGATGTTATCAAACGATCGACAATA
CTATTCTTGTGTTTGGCTATCTCCTTTGTTTATCAGCACAGTATCCGCAA
TATTCAACATTTTACGGACCAAAAACCTGGCTGTACTCATCGAAGATAAC
TACTGTTCGAATTTTTTAATGAGGGATATTCAAACATCTTTACTGATGCT
AAATGGTAATAAAACAAAGACTATTTTCAATCCTATTTATGTTGGTTTGG
CGCCTCATCAAGAAGCGCGCAATCGTGATCAATTCTATGATCTCTTGGTG
GAGGGACAAACAGATTTCCTCATGCTTTTGCAACGTGACCTACACAAACA
CGTGTTCAAAATGGCggcatttttcagtttgttGGGACCACATCAACGTT
GGTtgataccaaattttgatcaaaatgaacCTTTAGGGTTTGGTAATGTA
TTACCAGGACAGATATTATCTTTCCAGTTGAAGACAAATGACAATTTTGG
TGTGACGAAGTTGGCCGATGTTGTTGGATGGATATCTGAAACCTTCCAAC
ATTTTCGAAATGACCAATCACTGATCCACAAAAGTTCCATTCTGTACTCA
ACACTGATGAGAAGGATGTACCATTCCAATATCCAATATCGACAATCacc
tttagaaatattttactaCAATGGTGAAAATCAAGGCGAATGGCAATCCA
ACCAAGGATTTATGCGTGATAACAAGTTGACCTTTTATGGCGATGTATTG
AATATTCTACGGTCATCTGAAACAAATAGTCTTACAGATCGCATACGTAT
AGTCACAATAAACGATGCTCCGTATACTTTCGTTGATGGCAAATTTTACG
ACGCCGATAATGATATGTGTTCCGACGGTTTCTTATGTCAAATTCCGATA
CAAACGGATAGTTCCAGGCAACTTAATTACCAAAAGTCTTGTTGTATCGG
TTTCATACCGGATATTTTCCGCATGGTCATAAAGAACGTTGCTATACCGT
TCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCGGATTCAAGAACGGT
ACGTGGAATGGAATGATCGCGGATGTTGCTTACGGGAAAGCGGACATGGC
GATGGCTGCCATCACCATCACGAAAGAACGGTCAGATTCTGTATCTTTTA
GCGCCCCATTCATGTTCGACCAAACGGGAATCATAACAAAACCAGCAGTG
GTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCGCCTCTTTCCAAAGA
GCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTGTATGCTGTTGCTtt
acttctttgaaaatacaataTACTTTTACATTTATCACCACCATGGGTTC
AGTCATAAAGCGTATTACTCATTCCTCGAAGGACTTTCTCACATCTCTGG
TGTAACTTTACAAAGAGATCTTGGCGGGAAACATCCTTTACGCCCAGCCG
CCCGTATCATGTGTTTGTTTTTTGCTATTGGGATGGTAATAATTGTTTCG
ACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAGAGTAAAGAGAGAGA
GCCTCTACAAGGAGGATCACAAGATGTTAGATTCCGGAATCCAACCAACG
AATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTCTTCAAA
AACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGTA
CAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGTACTT
TGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTATCAAAA
GATCGTTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTTCTTTGG
CCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGATTAATC
AAGgcattttgaaatttaccaGTAAAGACATGATAGCAGAGTTACAGGCC
AAATGGTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAGCAATAC
GCAACTTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAGCGATGA
CGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGGTGGAAA
TATTTTCATGAGAAAGTCTTGAAACtgatgaaaaggaagattttaaaaAG
TGAATTGAAAAGTCCGGTGACGTAAATGAACTGGATTTATTTCACCAAAA
TGGATATCAATGTCTGTCTTACTGTTATGACTTCATGGCATCTGGCATAT
GGTCAAAGACTTCTGGTGTTTTACGAAAATGTTATCTTTGATTACGATGG
TCCAACTTTTAATGGTGACATTCGAAATGATTATCGATTTTCGTCCAAAA
ATAAGACTTCTTTTATTCGATATCACGACGATACGTTAGAACATTGTCAA
GACATTTGGCGAAATTTATCATTCAACTCTTTACAAAAAGATTATGACGG
TATAATTTCTTTAACAAAGTCACAAAACCTTTTGAGCAAACAACTTTCAT
CTTCAAATGAAGTATTGGATATATTATATCAATTTGAATCAACATTTAGT
AGATTGAAATGGATGTTATCAAACGATCGACAATACTATTCTTGTGTTTG
GCTATCTCCTTTGTTTATCAGCACAGTATCCGCAATATTCAACATTTTAC
GGACCAAAAACCTGGCTGTACTCATCGAAGATAACTACTGTTCGAATTTT
TTAATGAGGGATATTCAAACATCTTTACTGATGCTAAATGGTAATAAAAC
AAAGACTATTTTCAATCCTATTTATGTTGGTTTGGCGCCTCATCAAGAAG
CGCGCAATCGTGATCAATTCTATGATCTCTTGGTGGAGGGACAAACAGAT
TTCCTCATGCTTTTGCAACGTGACCTACACAAACACGTGTTCAAAATGGC
ggcatttttcagtttgttGGGACCACATCAACGTTGGTtgataccaaatt
ttgatcaaaatgaacCTTTAGGGTTTGGTAATGTATTACCAGGACAGATA
TTATCTTTCCAGTTGAAGACAAATGACAATTTTGGTGTGACGAAGTTGGC
CGATGTTGTTGGATGGATATCTGAAACCTTCCAACATTTTCGAAATGACC
AATCACTGATCCACAAAAGTTCCATTCTGTACTCAACACTGATGAGAAGG
ATGTACCATTCCAATATCCAATATCGACAATCacctttagaaatatttta
ctaCAATGGTGAAAATCAAGGCGAATGGCAATCCAACCAAGGATTTATGC
GTGATAACAAGTTGACCTTTTATGGCGATGTATTGAATATTCTACGGTCA
TCTGAAACAAATAGTCTTACAGATCGCATACGTATAGTCACAATAAACGA
TGCTCCGTATACTTTCGTTGATGGCAAATTTTACGACGCCGATAATGATA
TGTGTTCCGACGGTTTCTTATGTCAAATTCCGATACAAACGGATAGTTCC
AGGCAACTTAATTACCAAAAGTCTTGTTGTATCGGTTTCATACCGGATAT
TTTCCGCATGGTCATAAAGAACGTTGCTATACCGTTCGAAATGTACGTTG
TTGCGGACGGGAAGTATGGCGGATTCAAGAACGGTACGTGGAATGGAATG
ATCGCGGATGTTGCTTACGGGAAAGCGGACATGGCGATGGCTGCCATCAC
CATCACGAAAGAACGGTCAGATTCTGTATCTTTTAGCGCCCCATTCATGT
TCGACCAAACGGGAATCATAACAAAACCAGCAGTGGTTGAACTGGATTTT
TTGAATTGGGAGTTTTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCT
AGTGATTTTGGTTGTGGTTTGTATGCTGTTGCTttacttctttgaaaata
caataTACTTTTACATTTATCACCACCATGGGTTCAGTCATAAAGCGTAT
TACTCATTCCTCGAAGGACTTTCTCACATCTCTGGTGTAACTTTACAAAG
AGATCTTGGCGGGAAACATCCTTTACGCCCAGCCGCCCGTATCATGTGTT
TGTTTTTTGCTATTGGGATGGTAATAATTGTTTCGACTTACACAGCCGTT
TTGGCAGCACAAAGTTTGAAGAGTAAAGAGAGAGAGCCTCTACAAGGAGG
ATCACAAGATGTTAGATTCCGGAATCCAACCAACGAATTCCGATTCGGTA
TATTACGTGATAGCTCATACGAATCTTTCTTCAAAAACGGGGAAACGGAT
TTACTAAAACGGATGAGTGTGTTCATGGAACCGTACAATTATGACACCCT
TGCTGAGGGTATGGATATGGTGCGAAATGGTACTTTGCAAGCTTCATTCA
GTGATTTCGCTTTCCTGCATTTCTATTTATCAAAAGATCGTTCATGTCAA
CTCAAATTGGTCAAAGATAAACTCTACTTCTTTGGCCTTGGGTTCCCAAT
GGCGAAAGATTTTCCTTATCGAGAGCTGATTAATCAAGgcattttgaaat
ttaccaGTAAAGACATGATAGCAGAGTTACAGGCCAAATGGTTCGATAAT
ATTTGCCAACCGAATTTTTTTGTGACAAGCAATACGCAACTTTCGATTAA
ATTTTTTGGTGGTTTGGTATTCATACTAGCGATGACGATTATTGGAGCTT
TGTTGTTTCTGTACCCAGAACATTTGTGGTGGAAATATTTTCATGAGAAA
GTCTTGAAACtgatgaaaaggaagattttaaaaAGTGAATTGAAAAGTCC
GGTGACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007486XLOC_007486Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013398-proteinTCONS_00013398-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013398-exon-sc0000167-1491911889:418518..419141TCONS_00013398-exon-sc0000167-1491911889:418518..419141Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:418518..419141TCONS_00013398-exon-sc0000167-1510915933:418518..419141Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:418518..419141TCONS_00013398-exon-sc0000167-1575043694:418518..419141Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1491911889:419865..420400TCONS_00013398-exon-sc0000167-1491911889:419865..420400Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:419865..420400TCONS_00013398-exon-sc0000167-1510915933:419865..420400Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:419865..420400TCONS_00013398-exon-sc0000167-1575043694:419865..420400Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1491911889:421889..422103TCONS_00013398-exon-sc0000167-1491911889:421889..422103Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:421889..422103TCONS_00013398-exon-sc0000167-1510915933:421889..422103Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:421889..422103TCONS_00013398-exon-sc0000167-1575043694:421889..422103Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1491911889:422304..423112TCONS_00013398-exon-sc0000167-1491911889:422304..423112Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:422304..423112TCONS_00013398-exon-sc0000167-1510915933:422304..423112Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:422304..423112TCONS_00013398-exon-sc0000167-1575043694:422304..423112Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1491911889:423368..423531TCONS_00013398-exon-sc0000167-1491911889:423368..423531Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:423368..423531TCONS_00013398-exon-sc0000167-1510915933:423368..423531Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:423368..423531TCONS_00013398-exon-sc0000167-1575043694:423368..423531Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1491911889:423776..426200TCONS_00013398-exon-sc0000167-1491911889:423776..426200Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1510915933:423776..426200TCONS_00013398-exon-sc0000167-1510915933:423776..426200Clytia hemisphaericaexon
TCONS_00013398-exon-sc0000167-1575043694:423776..426200TCONS_00013398-exon-sc0000167-1575043694:423776..426200Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:418518..426200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.137959	0.0796261	0.0933085	0.130494	0.197113	0.14883	3.22946e-06	3.00959e-05	0	4.31228e-08	0.161531	0	0.334649	0.302112	0.0701544	0.0732593	0.163544	0.165538	0	6.46895e-08	3.20881e-07	0.332905	0.256195	0.405434	0	1.20815	0.235774	0.191101	0.256869	0.244554
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019594Glu/Gly-bd
IPR001320Iontro_rcpt
IPR001638Solute-binding_3/MltF_N
Vocabulary: Molecular Function
TermDefinition
GO:0005234extracellular-glutamate-gated ion channel activity
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005234 extracellular-glutamate-gated ion channel activity
molecular_function GO:0004970 ionotropic glutamate receptor activity
Blast
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BLAST of TCONS_00013398 vs. Swiss-Prot (Human)
Match: NMDE2 (Glutamate receptor ionotropic, NMDA 2B OS=Homo sapiens GN=GRIN2B PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 5.461e-43
Identity = 153/633 (24.17%), Postives = 279/633 (44.08%), Query Frame = 1 
Query:  919 FLMLLQRDLHKHVFKMAAFFSLLGPHQRWLIPNFDQNEPLGFGNVLPGQILSFQLKTNDNFGVTKLADVVGWISETFQHFRNDQSLI-HKSSILYSTLMRRMYHSNI--------------------QYRQSP-LEIFYYNGENQGEWQSNQGFMRDNKLTFYGDVLNILRSSETNSLTDRIRIVTINDAPYTFVDGKFYDADNDMC-SDGFLCQIPIQTD--SSRQLNYQKSCCIGFIPDIFRMVIKNVAIPFEMYVVADGKYGGFKNGTWNGMIADVAYGKADMAMAAITITKERSDSVSFSAPFMFDQTGIITKPAVVELDFLNWEFLAPLSKELQIYXXXXXXXXXXXXYF----FENTIYFYIYHHHGFSHKAYYSFLEGLSHISGVTLQRDLGGKHPLRPAARIMCLFFAIGMVIIVSTYTAVLAAQSLKSKEREPLQGGSQDVRFRNPTN---EFRFGILRDSSYESFFKNGETDLLKRMSVFMEPYNYDTLAEGMDMVRNGTLQASFSDFAFLHFYLSKDRSCQLKLVKDKLYFFGLGFPMA--KDFPYRELINQGILKFTSKDMIAELQAKWFDNICQPNFFVTSNTQLSIKFFGGLVFILAMTIIGALLFLYPEHL-WWKYFH 2712
             L+   ++   ++F++A    L G    W++P+    +        P  ++S      D     ++ D +  I+       ++ S I    S  Y+T  +R+Y SN+                     Y+  P L I   N E +  W+   G  +D  L     V   +         D + IVT+ +AP+  V+    D  +  C  +   CQ  I T+  +  +  Y K CC GF  DI + + K+V   +++Y+V +GK+G   NGTWNGMI +V   +A MA+ ++TI +ERS+ V FS PF+  +TGI    +          FL P S ++ + + +++++   +  F    F    Y              ++  + +  + G+     +  ++P    ++IM   +A   VI +++YTA LAA  ++ +  + + G S D +F+ P +    FRFG + + S E   +N   +    M  +M  +N   + + +  ++ G L A   D A L++   +D  C+L  +     F   G+ +A  KD  ++  ++  IL+      + EL+A W   IC        ++QL I    G+ ++L   +  +L+    EHL +W++ H
Sbjct:  228 ILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTVPAEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSCYNTHEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHPKLVIILLNKERK--WE-RVGKWKDKSLQMKYYVWPRMCPETEEQEDDHLSIVTLEEAPFVIVES--VDPLSGTCMRNTVPCQKRIVTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFI--ETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLS-DKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAE----MHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHLFYWQFRH 848
The following BLAST results are available for this feature:
BLAST of TCONS_00013398 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NMDE25.461e-4324.17Glutamate receptor ionotropic, NMDA 2B OS=Homo sap... [more]
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