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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013396 ID=TCONS_00013396|Name=TCONS_00013396|organism=Clytia hemisphaerica|type=transcript|length=2181bp
atttaaccaAAAGGTAAGAAGcaaaaaaaaaatgagacagaaaataaatt
caatatTACTGACATGTCTATTGGTGTTATGCTTAATACAAACCGTTCAT
GGAATTGTTGAAGGTATCTACTGTGGCAAAGAAAACTGTTATGATGTGCT
AGGAGTTAACAGGGAGACGACTACCAAGAAAGAAATCTCAAGGGCGTACC
GTAAATTAGCCCGGAAGTTCCATCCGGATACTTCTAAAGAAGAAGATGCG
GCTGTGAAGTTTCGTAAAGTTGCAACGGCTTATGAAATATTGAAGGAAGA
TGATTCAAGGAAAGATTATGACTACATGTTGGACAACCCTGAAGAAGCCT
ACTACCATTACTACCAATACTACCGTCGCCGATTGACACCAAAGGTCGAT
GTCCGTTATGTTCTCTTCGTTACCATCACCATTATCTCCATAATCCAATA
TCTCCATAAGGCAAACCGATACGAAGATGCCATCTCTTATGCTATGCAGA
ATCCGAAATTCCGGAACCAAGCCATGCAGATTATTCATCAAGAGGGGCTT
TTGGAGCACaacaaaaaatcttcaaagaacAAGAAGAGCAAGGAGGACcg
gaagaaagaagaagaacgtGTTTTAAGAGAAGTCGTTGAAGATTCCATTG
ATATCCGTGGTGGCTATAGTAAACCAACTTATAGAGACATCTTATGGGTT
CAACTGTCATGTCTACCTTACCAAACGTTTAATTACGTGAAATGGTACGC
CTGTTGGGTTCTCAAGTTCAACATACGCAAAGAAGAATACGGGGAGGAAG
AAAAAGAATACCTTACGTACAGTGGCCTCAATATGACGGAACAATACTGG
GCCGCCCTTGATGAATACACACGAGAAGACATCATGCACAAGGAATTATG
GGTACCTGAGAAATTGAAAGCTTATAAAGAGGCTCAAGAAGAAGAAATGC
GGGTTAAGATGGCGGAAAGCGGCCGCCATAAAATGTGGCGCCGCTATATG
AAAAAAGGTGGACCAGGGCAAATGACTTTCGCAGAGGATTAAGATATTAG
TGATGTAagcaaatttttaattatttaatttttattgcttttttaaGAAC
CATTTAAAAAATAGAGTTTTCAAGATTTATTAGCAATAGGTATTTCACTT
ACAGTCgtctctctcttattcgatcgAAAGTGAccaaaatgttctttaaa
ttaGGGAAggtttcgaattacagagagtagtTTATTCTACTTTTCATGTg
agaggaccaatattttagttcgaattattgaaagattcgaatagcAGAGG
TTCGAATTGGAAAGAGTTTTTTAAGTAATTTAAGTAATATTTAGGCACTA
TCTTTACCCCTCTAAAAGCCAGGAGTTATTATTACCAACGCTAGTAGACA
AATTCTTGTTCACCATGGTATATTgatatttgaattttgaagtaACTTTT
ATCAAAGATACATTGATGCATTGATACATTGAAATCGAGCTTCTTTCCGA
CATTAATATCTGGAAGAAACCAAACTTATGAAATGTTggcatacacgctt
tttttttaataagaatagtgtactttggttgagggtaagcattattctta
tttttctattgttctaaacaataggcctattgttttaaacccgaaatctc
accctgatattcttatagaagttattcttataaaagaaaaagcgtgtagt
tcTGTAGTTGTCTTTAATATTTTTACCCTAACATTACTAGAATCTTTTTT
CCCAAGACTTTTGCAGCTATTTGCAATGTTTTGgtaatttattttccttt
ttttatcatttttaggatatttatgaaaaattataataaacTAATATTTT
GATATCTAGGGGGTattgattgaaaattttattgataaGTCCTTAGCTTG
AACAAAATAATGTGCTAAAGTGTTTTTGTTACAGAAATCAATTTTGAATG
CGTGTGGCTTTCTACGTTTTGAAAATCCTCATTTTCAATAACAAATATTG
CTTTTTTGCAAaatagtttttcaaattttctgcaCGAAATTGTTATTGGT
AAACGAGGATATATTATTCTATCGTCATACCCACTGAGATATTATTTATA
GGAcgctttttttttgtttgaaaaatatgcaatttaaaaattaaacactC
GTTATtttgaagaaggaaaaaaagaaatatg Run BLAST on NCBI protein sequence of TCONS_00013396-protein >TCONS_00013396-protein ID=TCONS_00013396-protein|Name=TCONS_00013396-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
FNQKVRSKKKMRQKINSILLTCLLVLCLIQTVHGIVEGIYCGKENCYDVL
GVNRETTTKKEISRAYRKLARKFHPDTSKEEDAAVKFRKVATAYEILKED
DSRKDYDYMLDNPEEAYYHYYQYYRRRLTPKVDVRYVLFVTITIISIIQY
LHKANRYEDAISYAMQNPKFRNQAMQIIHQEGLLEHNKKSSKNKKSKEDR
KKEEERVLREVVEDSIDIRGGYSKPTYRDILWVQLSCLPYQTFNYVKWYA
CWVLKFNIRKEEYGEEEKEYLTYSGLNMTEQYWAALDEYTREDIMHKELW
VPEKLKAYKEAQEEEMRVKMAESGRHKMWRRYMKKGGPGQMTFAED Run BLAST on NCBI transcript from alignment at sc0000167:402083..416246+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013396 ID=TCONS_00013396|Name=TCONS_00013396|organism=Clytia hemisphaerica|type=transcript|length=14164bp|location=Sequence derived from alignment at sc0000167:402083..416246+ (Clytia hemisphaerica)
atttaaccaAAAGGTAAGAAGgtaagctatttttttcattcttatgtaat
atttaaaatgaagctattgaaaaagtttatgttttgcTCAAATTGGAAAA
AACCTTTTTGAGTTAAAAACCCCCTCTGGCCCTGCACATGCTGCTAGACT
CTAGACACTAGAGTGCTGTTGACACTCTTGACCATATTGACCATTGTATT
GACAGCATCGCAGCACGCACATTTCATTTGTTTtacttttgttgacattt
ttaacctggatatccaagctgtaAACAGTCCGTCACAAactgccatataa
acaaaattcaacattctcacaaaagtggtctttttgatttcccaaacatt
cctctaaagcgttcacttccacaataatttatgtaaattgcAATTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtttttatttacgtgaccgaagtgtctactaaaacaatccggg
ggaaagtggcgaagcaacacagcagattattcgcaaagtaaagaaatatc
ttttggcattgattGACAATCCTTAATTCAAAACTCaagaattcattttt
cattcgcgaaaaaaaaataaaataatgaattactattactaagacgcccc
cgttttttactctcgtttaatttccgatctcggaacgtgcaaaacgcccg
tccgccccatatccacccaatcagcttaaattcactttaattgtccattg
actttcaaaaaatagtaggatatttaaaaattatgaatttataataattt
caaaaaacaagaagtttgatacttcatcagtgaaatattcaataaattcc
tagtctcaattttcagtgggcgtttttctagggcttggtttatcgcgcaa
tttattctgcgtcacacaaactttctcggccgctcgtaataattatgcat
tgccaaatttggttctccattgtcaagtcaggatcaatggtgacgtcacc
taagcataaaaaagaaaggatttcgacagttttatgcatatattaatttg
caagATATTatattcgccgcgcgagcgcacttttcgtagactagtcggaa
tacttttttttacttgcgggattgatggtaacttttcagtcgggtgttta
agataaaaactgcaattattgctcttttcggaaattattgccgaaaacgg
caatttttttaacgatgaaatgctgaatcagcagaaaNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNttcatcttcgttattttttaaatg
aagcacaaccgaaaaaaaacaaaacttcagaaagttgcgtatttccagtg
agtaaacgattctgaaaattaacaaaattgatgatgatgattttttttcg
gtcaggcaaatgtctcgtattgggggttctagtcttgaccacTAAGCCTg
tacgcgagattgaagcgtttgggtaaacgagacaaaattccaaaaaagct
ggtgttttgaagcgcttccgtgctctcgaaatatcgctgtttgtgacgga
CTGGTAAATGATCTTCTTAATTTGATGCTTCTGCAATTTACAGCTTTGTC
TACCTACCTAGATCCTTGAAAATACTCcagttttcagagcatgtcatgGA
TGCCCCCAAAGGAAAAATTATACCATTATATTGAAATCCTGCCGTTAAAC
TTTGTGTACCCACCCAGAAAGGCTgctaaaaaaacagaaaaagtgacaaa
attggcaaattttcagtgattttgcCCCTGACTGAGActagaaaattatc
aaaaatttgcccctTGCCTTTGAAACTGATACACTCTGCCCCTGAGATCT
CGATGATTTCTGCCATACTAGGACCCTGCCAACACACCGGACTTAacaaa
caccggacacgcgaaagtctggtgtaaaatgagaattttttttaccaccg
gacaatttctacaccagACTTAAGctggaccctgccgacgcaccggactg
tccggtgtatttgtccggtggaaaaaagtatcctttcgttacaccggacg
caataagtccggtgtcagtccggtgttgcatacagggaattttggacgtc
ggacatttatgaaacaaaaaattaagaaacaccggacgcaccagACTGGT
CATTtctggtgttttgattgtccgttggaaaaaaatatccttctccaaca
ccggacatccgacttccttaagtccggtgtagagattgtccggtggtaaa
aaaattctcattttacaccggacttttgcatgtccggtgttcgttaagtc
cggtgcgtcggcagggtcctactTAAgcaaggaagtcggatgtccggtgt
cggagaaggatatttttttcccacCAGACAATCAAAacgacatgaccagt
ccggtgcgtccggtgtttcttaattttttggacctaccgccGGGTgtccc
ggtggaggttctataaattaacccatgtccgtccgttcgttcgttcgtcc
gtccgtccgtctgttaccagcttttctcaggattgactCATTAGTTTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNttattcgccttaaaagacggattttcgtattttgggggaaat
tccctttaaccaaataagaaaatatagcttttctcaatgttgactcatat
ttgttttctgattttttgcacattgatgcaaaatgacaatgcccaaaatg
tgacggagccagatttttaaggaaaatttttttgggcaaatttgggccaa
aaacagccataaaggttttttgggtctgaatggtttaagtgattttcgta
tttggggacattcctttttaccattttacattattcaacacacaagcttt
atttttccattctgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNtttccattctgaatttttgtacaattatt
gtcacttttttcttattttcatctgatgttaatcattaggtaggtccatt
cagcatgttgcttgttgttTTATAAATGTCCGGTGttcaaaattccctgt
atgcaacaccggacttattgcgtctggtgtagcgaaaggatactttttgc
caccggacaaatacactggacagtccggtgcgtcgtcATGGTCctgccat
actctgcaaactggaaAATACTAGGGTtggcaaaattttagctttgcaCA
ATATATATTTAAATAGACAgctagtcacactaggaaatcatgctttcaga
aaaaacaacatcagtcatctacaggatgtaattgcaacaacaaggatatG
AGAGTTACCCAAGAcagttaaaatttgaaaacttaaaagGAGACTAAATG
ACCAATTGCAAACGTGCAACAGCCAggatatcaaccaaccaaatttgtca
ttcaattcccgagacagctcttcaattttcaaggccttgtttatatgcta
aagtaaaaataattccccacatgtaaatgggtcagtgtttgaggtccggc
aaaatttccaggaaatagCCTTTCCGGGGGTGCTCGGATCTTGGTGCGTT
TCGTCTCCCCCGtggatctttttcttgggaagttgatcttcaaattagtt
ggcttggctcaaatcttttcatttatggctcaaattttaggctaattctt
atagtttttgaaaatgttaatttcattaaaaagcgccgggttattttttc
atgaattcctttagaagttttgcggcgcactTGTTTGCTTGCAAGTCAAG
TGAACGacatagcgctttcgcagcattaatctttgatgcACATTTTggtg
ggacgctagtgtgactaactgatagATGTTTTGGCAAACccgacagtctt
ttgaataactaattactccacagcagttacctagagacaagataatttat
catgtttttattggctgggggaaagtaatgtatgtggagtaattaccgtg
aatggtcctaaatccatagctgtcaactctcccgcattgagcgggagact
cccgcatgtcaacgatttctcccgcgtgaagaaaattctgccaaatctcc
cgcatttttgggattttctcccgcatctcccgcatttccaaaaattttcc
gattttggaaaaaccaaacggcgaaatttctggattttgaaagatcggaa
caaaaattccccaatttcccgaaaaaaatttccaagaaaatcggatttta
caagaaaatttccccgatttcccgattttccgattttgaaaaatcggatt
attggggaaaatttttccgactttgagctctcccgcatttttgtgaggcg
aagttgacagctatgtaAATCCGACAGTcttgcctaaatccgacccccaa
ataactgctatgaaaaaaaattctatgtttaccaACAtcccctctccaag
ttgaacaataaactattgcaaggactctcaaaacaaaatatctAACAAGA
TAACTATAATGTTAAGAtatcaattaatgtgatcaaaaaattgtgagttg
taaaaataatccaaagttgctcgtgtttaaaacgttaacaatttatgtaa
tgaaaaattatgttttgtataagaagcaattattgttatttggttcaatt
ggttcattgtatcaaatctctcagtttagttgacactttggtatcttcat
cgcgtcacagcgaaaggtttgtttttattttagtttgtatctttgaaaga
cttaggaccactcacggtagttattcaaaagaccgtcGCGTTGGCCAAAA
CAACTATTAAAAAAGAAGTGCACACCACAGTCCACACGTGCGTGCGCTGC
ATCACTGGGGCTCTTCAGTTAATTAAAGTCCATTACAGACAGGGGATGAA
CGACAGTAGAATTCCAAGGCAAATTCCTGGATTTCCAATACCAAAGCAAT
TGAAACGCCTGTCTGGATTTCTATAGTaatataaaatcatttttttggtT
GCAAAATTTGGAATTTATATATACTGTATTTTTTCTGACTGAGCTTTGAT
TTGATGCTCTTTTGCCGGTATTTGCAGGTGAGGACTGTGctattttttta
gttcaatatTCAATGAGGTTGGAACTTCGAtatttgaggattacgatttt
accagctttttagccatttttgccACGCCTAAACCCAAATCTTGCAACCT
TTTACCTAGAGTAGAGGAAGATCgtaaatttttcatcttcaagaGTTGAT
TTTCAACAACAATatatataccgtcaactgctcttctaacttgggactat
ctaaCAAAACATGGGACCAGGGAGGTCAAGCAATTAGTTAATACACAACA
CCTATGACACTTAATACCGTGGTGGGTCCTTTTCTGAAATTAGCAAAATG
CAGTTAATACACCAGTGTATTAACTGTCAAAGGGGGTGGTGTTAAGACAA
TTTTAGAACTCAAAATTGTATTAAATGTCCATAGTTATAGTTCATTATGT
TTGATATTTAGAGGGATACTCTTTTGAGATTTATTGGAGTAGTATTTAGT
ATTTGTTTGCATTAATTGTTTGAGGAACACTTTTGAATAAGAACCTGTAA
GAACAACAAATCATTCTTGATATTTGAAGCTTCTGAATTGAACTGAGAAT
TTTCTGATGCTATAGCAGGCTGTAGGACACTGTTATacactttgttttta
ttatattctaTCAAAGTTAGTTTTATCTAGTTTCATTACTGTTACCTATT
TACGTAACGATCTTGAAACTTTTCCCAAGTTTTATTCAGTTAAAAGATGA
cataaaaccaaaacaaattcCATGACTCTTCATATTATGGCCTATTATGG
GTTCAAGATTTTGTAAGCGGCCTACCAGACCATAGTTTGGCACTTCAAAA
CTAAGCAACCATGCAACTGGAAAAcctcaaaatctttttcattttactca
aaatctaaaaattttaactgCCAGACAGTTACCTAAGCAATGTAGGCACC
CTGACTTACAAaaacttaatttaaattttctaatgACATAAATCTGTGAC
ATAAGTAGTCTCAAAACAGTTAAAACCTCTTGTATTGCATCAAATTAACG
AGAAAATACGGTTGAGAGAGCAGTTAATACACATAGTGTTGTGTATTGTT
ATGTATTAACTGCTTGCCCCTTGTTAtaaagcaataaaaaatgaaacttt
tccatttcgcaccaattcttcaaaataaaaatattcaagattttaagttc
ttcttttattcaatgattttatgCAGCACTTTGTAGACTTTTCCTTCCAC
TTTCTTCAGATgattgaagatgagaaatagtcttaggaccttaggattgc
ggattgaaacaaatagaaatcacggattgaaacaaataaaagaggTGTTA
TGAAGGGTGAGATTTTAAAGCTGTCtctcgtgcaaggcactgaaaggcca
cagGCATAAAAAAGAAGGGCCGTGTGAAATGTGGCAATGTTATTGGTTGA
CATAAAAACAAACAGTCTGCGAAGGAGCGCCacaaagcaatcagtagaag
agaccagaTTGTTGCAGATTTAGATATAAACTTCtcacagggattacttg
tcaatgtgttgtgtcaattTGTCAGCATTATATTGTTGTAAATGGAAAGT
ttaaagaggtaagactagcctagtttctaatgaTAATGATATTTTATTCT
TCTCTCTGGAAATGTGGCTAGGTGACAACATAAAAAAATCTCACCTGGTC
AcccgaaaaactttttttcttttttatatacaTGATATTATACTCTTTAA
ACACAAAAGAGGTCTTAAAATTGTTTATACTTATTTGTCAGAAATCTTCA
GTTTAAAACTAGATAATTAGATAATTAGTGTATTAGTTCAACCTTTTCTT
TTGCCCATGGTGAAAAGTTTTGACATCGGTAGTACGCATTTCCTCACCAG
ACACATGTGGGTAGAATGCTTCTAAGAGCTAGAATTTCTAAAGTTGTCAG
TATTATTTGAAAGATGTTTTCCTAATACCTATTTTTTTCAACCTGAGATG
ATTCTCCAATGTGATGGTTGATTCTTATTCTTTAGATTCTTTCATTCTTA
TTATTTGGGATTTTCTAGTAAGCATGAATTGaatgaaaacaagaaaaaca
agagttaaatttttacaaaaagatgaaaaaatatttgggTGTTCTAGTTT
GGGTTTTTATCCTATATACCCTTTAATCCATTTGATCCATtgtattctct
tttttttgtctttgatgAAAGTTTTCATCAGCGTAGGTTCAATCAGTACC
TAAATAGTTTTATCAGAGCCAATATTCTTGGAATAGTAATCACTAAACCC
AGTATACCTCCCTAATTTAAATCTGATAGTGTTATTTTAGAGTTTGAAAA
GCATTTTTGCTATGGATAAAGTTCTCTGGTTTTTTATTAGAAAGGGAATA
TCCATTAGAGCCAGGGAAAATTAATTTCAGTCAAATGTCAGGTAAGATAA
TTTTGAAGAAAAGCAGGGAATAATAACTTTACCCTCAGATAATTATAATA
TATTATGCTTTCATCTTTTGTATCCAGCTTCTTTCATAAGGTCAGGCTAG
CCTTTACTCTATACTTATGGCAGAGGGCTAACTAAAACAATTTCCTTGTA
GCAAATTAACATGTATAAAAAGGTGCCCAATATTGAGCTTCCTTTAAGTC
ATCAAAATAATGAATTATTGACATGGTGTCGTGTCATTTTACTTCCTTAT
GCTTTGTTATGGAAAGATAATTAAGTGGCTAAATGATCTAAATTAACATT
TTTCATTGTTGTTTAATTAGTTAAGAGAAAAATTAATATAAGGATCATCg
ttttgttacttttttgaGTGGGTTATGATTAAAAAGACACTAGGCTTGAT
AgatagacttttttctttatcaatGAAAGTTTCAAGTTGAATTTTTTAAT
AAGCTGTGTCAACATGCTGCATTATATTCATTTTACACATGTGAATTCGA
ATGAAGACTTTCTTGTGCAAATATTATACAATATTTTAGCGTTAATTTAA
TATTGCTATGTTGAAAAATTCAAAGCTTCGATTTCgcaagttttttcttt
ttacagttTAATCCttatcttttcatttttgatgtCGATGTTAGAAATCC
ACGTTAACAGTGTTAATAAAGTTGAAGAAGAAATTTCTTGTTTAAAGTAA
AGTATGTTTCATTCAAGATTACATCNGAACAGTGTTAAATAAAGTTGAAG
AAGAAATTTCTTGTTTAAAGTAAAGTATGTTTCATTCAAGATTACTTCAA
AGGCAAGTCAGGTGAATCGTTCGGTCGTAACATTTTGTAATACTGTAGTA
TTTTTaagtacacgttttcttttttataagaacattcaaaaatctttgaa
gccttaggatgttcttaactttttgagtttcaagcctaaaaatgttttta
acatgttcttattttcccattttgtgggtatttttgtcaattttccgaAA
AAGTTGGCTATTTTCGAATCTGCgaagccttaagatgttcttaacttgtt
cttaacattttggccatcaaagcctttcgttcttatatagtttgctctta
taaaaaacgtgtaagattAGCGAGTGCCAGATTTAAATGATTATTCTGCT
TTGATGCAATTCTTAGTTTGACCTCGATTATGTCATgtcttgatgatttt
ttattcGATCATCGATCTTGGATATTCTACAGAAAAGCAGaagattcaat
ttttaaatccttCAATGTTTAATTttctagcaaaaaaaaaatgagacaga
aaataaattcaatatTACTGACATGTCTATTGGTGTTATGCTTAATACAA
ACCGTTCATGGAATTGTTGAAGGTATCTACTGTGGCAAAGAAAACTGTTA
TGATGTGCTAGGAGTTAACAGGGAGACGACTACCAAGAAAGAAATCTCAA
GGGCGTACCGTAAATTAGCCCGGAAGTTCCATCCGGATACTTCTAAAGAA
GAAGATGCGGCTGTGAAGTTTCGTAAAGTTGCAACGGCTTATGAAATATT
GAAGGAAGATGATTCAAGGAAAGATTATGACTACATGTTGGACAACCCTG
AAGAAGCCTACTACCATTACTACCAATACTACCGTCGCCGATTGACACCA
AAGGTCGATGTCCGTTATGTTCTCTTCGTTACCATCACCATTATCTCCAT
AATCCAATATCTCCATAAGGCAAACCGATACGAAGATGCCATCTCTTATG
CTATGCAGAATCCGAAATTCCGGAACCAAGCCATGCAGATTATTCATCAA
GAGGGGCTTTTGGAGCACaacaaaaaatcttcaaagaacAAGAAGAGCAA
GGAGGACcggaagaaagaagaagaacgtGTTTTAAGAGAAGTCGTTGAAG
ATTCCATTGATATCCGTGGTGGCTATAGTAAACCAACTTATAGAGACATC
TTATGGGTAAGCTTGTTTTTACGTCCTATGCCATAGTTTtcgaattgttt
attcttaagAATTTTCATTGACactatttatttcaaaatttagctCAAGG
ATATTTGGTATGCAGTCTTCTTTCTAAGCTCTATACCTTTCGTACCTTGC
TTGATCTCATACTCGGTTATTCCACGAGGTATCATAGAACAACTGCAACC
TCCTTGAGTCTTAAATGTCCTTTTAAATTGCAAACTTACACTTTTTTTCG
CCTACTAACGTTTAGTAGGCAAATTCCACTTCCCCATCCAACGATGTTAC
TTTGTAGCTCATCAAAATGTTATTAAAGTGAATTAGTAGCAAACTTCTGT
AGCTCACTGAGGTTGATATTGAAATTAACGAGTCGTTGTCATATTGCCTT
GATCATTCCGTTATGAAGAGGTTTCCAAcacaatacacaggttgcaaaat
taaaaaagtctgaagacaaatcacgcttttactcgaaattttcatGTGCT
TGTtatacatgacatttatttctgattggttcgaatttattgacactaat
aaagttatcagctgtaagttgtaaagcaagcgacatgggaataaaatcac
gtgaactttttcgagtaatcgcatgttttgactgcactgatataattttg
caacccgtgtatttgTCATTCTTCCAATAGGTTCAACTGTCATGTCTACC
TTACCAAACGTTTAATTACGTGAAATGGTACGCCTGTTGGGTTCTCAAGT
TCAACATACGCAAAGAAGAATACGGGGAGGAAGAAAAAGAATACCTTACG
TACAGTGGCCTCAATATGACGGAACAATACTGGGCCGCCCTTGATGAATA
CACACGAGAAGACATCATGCACAAGGAATTATGGGTACCTGAGAAATTGA
AAGCTTATAAAGAGGCTCAAGAAGAAGAAATGCGGGTTAAGATGGCGGAA
AGCGGCCGCCATAAAATGTGGCGCCGCTATATGAAAAAAGGTGGACCAGG
GCAAATGACTTTCGCAGAGGATTAAGATATTAGTGATGTAagcaaatttt
taattatttaatttttattgcttttttaaGAACCATTTAAAAAATAGAGT
TTTCAAGATTTATTAGCAATAGGTATTTCACTTACAGTCgtctctctctt
attcgatcgAAAGTGAccaaaatgttctttaaattaGGGAAggtttcgaa
ttacagagagtagtTTATTCTACTTTTCATGTgagaggaccaatatttta
gttcgaattattgaaagattcgaatagcAGAGGTTCGAATTGGAAAGAGT
TTTTTAAGTAATTTAAGTAATATTTAGGCACTATCTTTACCCCTCTAAAA
GCCAGGAGTTATTATTACCAACGCTAGTAGACAAATTCTTGTTCACCATG
GTATATTgatatttgaattttgaagtaACTTTTATCAAAGATACATTGAT
GCATTGATACATTGAAATCGAGCTTCTTTCCGACATTAATATCTGGAAGA
AACCAAACTTATGAAATGTTggcatacacgctttttttttaataagaata
gtgtactttggttgagggtaagcattattcttatttttctattgttctaa
acaataggcctattgttttaaacccgaaatctcaccctgatattcttata
gaagttattcttataaaagaaaaagcgtgtagttcTGTAGTTGTCTTTAA
TATTTTTACCCTAACATTACTAGAATCTTTTTTCCCAAGACTTTTGCAGC
TATTTGCAATGTTTTGgtaatttattttcctttttttatcatttttagga
tatttatgaaaaattataataaacTAATATTTTGATATCTAGGGGGTatt
gattgaaaattttattgataaGTCCTTAGCTTGAACAAAATAATGTGCTA
AAGTGTTTTTGTTACAGAAATCAATTTTGAATGCGTGTGGCTTTCTACGT
TTTGAAAATCCTCATTTTCAATAACAAATATTGCTTTTTTGCAAaatagt
ttttcaaattttctgcaCGAAATTGTTATTGGTAAACGAGGATATATTAT
TCTATCGTCATACCCACTGAGATATTATTTATAGGAcgctttttttttgt
ttgaaaaatatgcaatttaaaaattaaacactCGTTATtttgaagaagga
aaaaaagaaatatg Coding sequence (CDS) from alignment at sc0000167:402083..416246+ >TCONS_00013396 ID=TCONS_00013396|Name=TCONS_00013396|organism=Clytia hemisphaerica|type=CDS|length=3123bp|location=Sequence derived from alignment at sc0000167:402083..416246+ (Clytia hemisphaerica)
tttaaccaAAAGGTAAGAAGcaaaaaaaaaatgagacagaaaataaattc
aatatTACTGACATGTCTATTGGTGTTATGCTTAATACAAACCGTTCATG
GAATTGTTGAAGGTATCTACTGTGGCAAAGAAAACTGTTATGATGTGCTA
GGAGTTAACAGGGAGACGACTACCAAGAAAGAAATCTCAAGGGCGTACCG
TAAATTAGCCCGGAAGTTCCATCCGGATACTTCTAAAGAAGAAGATGCGG
CTGTGAAGTTTCGTAAAGTTGCAACGGCTTATGAAATATTGAAGGAAGAT
GATTCAAGGAAAGATTATGACTACATGTTGGACAACCCTGAAGAAGCCTA
CTACCATTACTACCAATACTACCGTCGCCGATTGACACCAAAGGTCGATG
TCCGTTATGTTCTCTTCGTTACCATCACCATTATCTCCATAATCCAATAT
CTCCATAAGGCAAACCGATACGAAGATGCCATCTCTTATGCTATGCAGAA
TCCGAAATTCCGGAACCAAGCCATGCAGATTATTCATCAAGAGGGGCTTT
TGGAGCACaacaaaaaatcttcaaagaacAAGAAGAGCAAGGAGGACcgg
aagaaagaagaagaacgtGTTTTAAGAGAAGTCGTTGAAGATTCCATTGA
TATCCGTGGTGGCTATAGTAAACCAACTTATAGAGACATCTTATGGGTTC
AACTGTCATGTCTACCTTACCAAACGTTTAATTACGTGAAATGGTACGCC
TGTTGGGTTCTCAAGTTCAACATACGCAAAGAAGAATACGGGGAGGAAGA
AAAAGAATACCTTACGTACAGTGGCCTCAATATGACGGAACAATACTGGG
CCGCCCTTGATGAATACACACGAGAAGACATCATGCACAAGGAATTATGG
GTACCTGAGAAATTGAAAGCTTATAAAGAGGCTCAAGAAGAAGAAATGCG
GGTTAAGATGGCGGAAAGCGGCCGCCATAAAATGTGGCGCCGCTATATGA
AAAAAGGTGGACCAGGGCAAATGACTTTCGCAGAGGATTAAtttaaccaA
AAGGTAAGAAGcaaaaaaaaaatgagacagaaaataaattcaatatTACT
GACATGTCTATTGGTGTTATGCTTAATACAAACCGTTCATGGAATTGTTG
AAGGTATCTACTGTGGCAAAGAAAACTGTTATGATGTGCTAGGAGTTAAC
AGGGAGACGACTACCAAGAAAGAAATCTCAAGGGCGTACCGTAAATTAGC
CCGGAAGTTCCATCCGGATACTTCTAAAGAAGAAGATGCGGCTGTGAAGT
TTCGTAAAGTTGCAACGGCTTATGAAATATTGAAGGAAGATGATTCAAGG
AAAGATTATGACTACATGTTGGACAACCCTGAAGAAGCCTACTACCATTA
CTACCAATACTACCGTCGCCGATTGACACCAAAGGTCGATGTCCGTTATG
TTCTCTTCGTTACCATCACCATTATCTCCATAATCCAATATCTCCATAAG
GCAAACCGATACGAAGATGCCATCTCTTATGCTATGCAGAATCCGAAATT
CCGGAACCAAGCCATGCAGATTATTCATCAAGAGGGGCTTTTGGAGCACa
acaaaaaatcttcaaagaacAAGAAGAGCAAGGAGGACcggaagaaagaa
gaagaacgtGTTTTAAGAGAAGTCGTTGAAGATTCCATTGATATCCGTGG
TGGCTATAGTAAACCAACTTATAGAGACATCTTATGGGTTCAACTGTCAT
GTCTACCTTACCAAACGTTTAATTACGTGAAATGGTACGCCTGTTGGGTT
CTCAAGTTCAACATACGCAAAGAAGAATACGGGGAGGAAGAAAAAGAATA
CCTTACGTACAGTGGCCTCAATATGACGGAACAATACTGGGCCGCCCTTG
ATGAATACACACGAGAAGACATCATGCACAAGGAATTATGGGTACCTGAG
AAATTGAAAGCTTATAAAGAGGCTCAAGAAGAAGAAATGCGGGTTAAGAT
GGCGGAAAGCGGCCGCCATAAAATGTGGCGCCGCTATATGAAAAAAGGTG
GACCAGGGCAAATGACTTTCGCAGAGGATTAAtttaaccaAAAGGTAAGA
AGcaaaaaaaaaatgagacagaaaataaattcaatatTACTGACATGTCT
ATTGGTGTTATGCTTAATACAAACCGTTCATGGAATTGTTGAAGGTATCT
ACTGTGGCAAAGAAAACTGTTATGATGTGCTAGGAGTTAACAGGGAGACG
ACTACCAAGAAAGAAATCTCAAGGGCGTACCGTAAATTAGCCCGGAAGTT
CCATCCGGATACTTCTAAAGAAGAAGATGCGGCTGTGAAGTTTCGTAAAG
TTGCAACGGCTTATGAAATATTGAAGGAAGATGATTCAAGGAAAGATTAT
GACTACATGTTGGACAACCCTGAAGAAGCCTACTACCATTACTACCAATA
CTACCGTCGCCGATTGACACCAAAGGTCGATGTCCGTTATGTTCTCTTCG
TTACCATCACCATTATCTCCATAATCCAATATCTCCATAAGGCAAACCGA
TACGAAGATGCCATCTCTTATGCTATGCAGAATCCGAAATTCCGGAACCA
AGCCATGCAGATTATTCATCAAGAGGGGCTTTTGGAGCACaacaaaaaat
cttcaaagaacAAGAAGAGCAAGGAGGACcggaagaaagaagaagaacgt
GTTTTAAGAGAAGTCGTTGAAGATTCCATTGATATCCGTGGTGGCTATAG
TAAACCAACTTATAGAGACATCTTATGGGTTCAACTGTCATGTCTACCTT
ACCAAACGTTTAATTACGTGAAATGGTACGCCTGTTGGGTTCTCAAGTTC
AACATACGCAAAGAAGAATACGGGGAGGAAGAAAAAGAATACCTTACGTA
CAGTGGCCTCAATATGACGGAACAATACTGGGCCGCCCTTGATGAATACA
CACGAGAAGACATCATGCACAAGGAATTATGGGTACCTGAGAAATTGAAA
GCTTATAAAGAGGCTCAAGAAGAAGAAATGCGGGTTAAGATGGCGGAAAG
CGGCCGCCATAAAATGTGGCGCCGCTATATGAAAAAAGGTGGACCAGGGC
AAATGACTTTCGCAGAGGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013396-exon-sc0000167-1491911889:402083..402103 | TCONS_00013396-exon-sc0000167-1491911889:402083..402103 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1510915933:402083..402103 | TCONS_00013396-exon-sc0000167-1510915933:402083..402103 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1575043694:402083..402103 | TCONS_00013396-exon-sc0000167-1575043694:402083..402103 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1491911889:413413..414088 | TCONS_00013396-exon-sc0000167-1491911889:413413..414088 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1510915933:413413..414088 | TCONS_00013396-exon-sc0000167-1510915933:413413..414088 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1575043694:413413..414088 | TCONS_00013396-exon-sc0000167-1575043694:413413..414088 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1491911889:414763..416246 | TCONS_00013396-exon-sc0000167-1491911889:414763..416246 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1510915933:414763..416246 | TCONS_00013396-exon-sc0000167-1510915933:414763..416246 | Clytia hemisphaerica | exon |
| TCONS_00013396-exon-sc0000167-1575043694:414763..416246 | TCONS_00013396-exon-sc0000167-1575043694:414763..416246 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000167 | supercontig | sc0000167:402083..416246 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001623 | DnaJ_domain |
Blast
BLAST of TCONS_00013396 vs. Swiss-Prot (Human)
Match: DJC25 (DnaJ homolog subfamily C member 25 OS=Homo sapiens GN=DNAJC25 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.010e-62 Identity = 148/324 (45.68%), Postives = 216/324 (66.67%), Query Frame = 2
Query: 101 GIVEGIYCGKENCYDVLGVNRETTTKKEISRAYRKLARKFHPDTSKEE-----------DAAVKFRKVATAYEILKEDDSRKDYDYMLDNPEEAXXXXXXXXXXXLTPKVDVRYVLFVTITIISIIQYLHKANRYEDAISYAMQNPKFRNQAMQIIHQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDIRGGYSKPTYRDILWVQLSCLPYQTFNYVKWYACWVLKFNIRXXXXXXXXXXXLTYSGLNMTEQYWAALDEYTREDIMHKELWVPEKLKAYKEAQEEEMRVKMAESGRHKMWRRYMKKGGPGQMTFAED 1039
+VEG+YCG +CY+VLGV+R + K EI+RAYR+LAR++HPD + + A F VATAYE LK++++RKDYDYMLD+PEE Y HYY YY RRL PKVDVR V+ V++ IS+ Q+ N Y AISY PK+R QA +I Q+GLL+ K+ KNKKSKE+ + EEE +++ +++ IDI+GGY KP D+L Q+ P+ +Y+ WY W+ FNI+ +EYGEEE+ Y+ + M++ + +L+++ +E + +ELW+ E + YK+ QEEE++ K+A R K +RR+MK GPG++TF +D
Sbjct: 38 ALVEGLYCGTRDCYEVLGVSR-SAGKAEIARAYRQLARRYHPDRYRPQPGDEGPGRTPQSAEEAFLLVATAYETLKDEETRKDYDYMLDHPEEYYSHYYHYYSRRLAPKVDVRVVILVSVCAISVFQFFSWWNSYNKAISYLATVPKYRIQATEIAKQQGLLKKAKEKGKNKKSKEEIRDEEENIIKNIIKSKIDIKGGYQKPQICDLLLFQIILAPFHLCSYIVWYCRWIYNFNIKGKEYGEEERLYIIRKSMKMSKSQFDSLEDHQKETFLKRELWIKENYEVYKQEQEEELKKKLANDPRWKRYRRWMKNEGPGRLTFVDD 360
The following BLAST results are available for this feature:
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