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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013348 ID=TCONS_00013348|Name=TCONS_00013348|organism=Clytia hemisphaerica|type=transcript|length=821bp
AAGATTTTTTATGGTGTACCAGACGACGTAACATCTAAAAGCCAAAGCAC
AAGTGTAAAACCCTTTAAAGAGGCTGCAGAACCGCCTGTCAAAATAGAGA
CAAGTGGTCTAGCACCACTTCAAACAGCGAAACCTAAAGATCCTTCTAAT
GATCGAATTTACATCAACGAGTTTACACCAAAGTCTGAACATGATAAATC
AAACCGACTGAACCTATACCTGAACGAATTCAAAAACAATAAGTTAAAAG
AGGATAACCCGAACCGACTCCTGCATCTTTACTTAAACGAATTcgcaaac
aacaaaaacaatttgaaacagACTCATTCAAATACAATGGTAAAACCCTC
AGTCAAGAAAACTAACAAAAGTGAAAAACCTGAACGTATTTATATAAACA
ATTTCACAGACCATAAACTTTCAAATGTGTTGAACCAAGGAGAGGTTGCA
ACAGACTATAAAGACACGAACAATAGATCTGATAAGGATCAACAACATTA
CAAACCAACAGGCACATTTTCTCCAGAAGCTTCGGTTACAGAGCTTCACC
TTTCCACCAATGCTAACAACAAAAATCGACAACTTTTTGTGCCAAGTGCT
CATACGTAGAATTTTAACGAATTCggcaattagattttttgtaaataaat
tatAGTTTTGTTATGAACTTAGAAGTCATAAAAGAAGTCTCTCTAGAATA
TCTACAATTTTTGGCGATatataaattttcaatattctACAAATAGTGTA
AAGATACGGCACTAATGGTTTAAAGAGCGAAAGTTTACGCATGCGTCTGG
TAAAATGAAGTTGTAGAATTT Run BLAST on NCBI protein sequence of TCONS_00013348-protein >TCONS_00013348-protein ID=TCONS_00013348-protein|Name=TCONS_00013348-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
KIFYGVPDDVTSKSQSTSVKPFKEAAEPPVKIETSGLAPLQTAKPKDPSN
DRIYINEFTPKSEHDKSNRLNLYLNEFKNNKLKEDNPNRLLHLYLNEFAN
NKNNLKQTHSNTMVKPSVKKTNKSEKPERIYINNFTDHKLSNVLNQGEVA
TDYKDTNNRSDKDQQHYKPTGTFSPEASVTELHLSTNANNKNRQLFVPSA
HT Run BLAST on NCBI transcript from alignment at sc0000164:443586..444406 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013348 ID=TCONS_00013348|Name=TCONS_00013348|organism=Clytia hemisphaerica|type=transcript|length=821bp|location=Sequence derived from alignment at sc0000164:443586..444406 (Clytia hemisphaerica)
AAATTCTACAACTTCATTTTACCAGACGCATGCGTAAACTTTCGCTCTTT
AAACCATTAGTGCCGTATCTTTACACTATTTGTagaatattgaaaattta
tatATCGCCAAAAATTGTAGATATTCTAGAGAGACTTCTTTTATGACTTC
TAAGTTCATAACAAAACTataatttatttacaaaaaatctaattgccGAA
TTCGTTAAAATTCTACGTATGAGCACTTGGCACAAAAAGTTGTCGATTTT
TGTTGTTAGCATTGGTGGAAAGGTGAAGCTCTGTAACCGAAGCTTCTGGA
GAAAATGTGCCTGTTGGTTTGTAATGTTGTTGATCCTTATCAGATCTATT
GTTCGTGTCTTTATAGTCTGTTGCAACCTCTCCTTGGTTCAACACATTTG
AAAGTTTATGGTCTGTGAAATTGTTTATATAAATACGTTCAGGTTTTTCA
CTTTTGTTAGTTTTCTTGACTGAGGGTTTTACCATTGTATTTGAATGAGT
ctgtttcaaattgtttttgttgtttgcgAATTCGTTTAAGTAAAGATGCA
GGAGTCGGTTCGGGTTATCCTCTTTTAACTTATTGTTTTTGAATTCGTTC
AGGTATAGGTTCAGTCGGTTTGATTTATCATGTTCAGACTTTGGTGTAAA
CTCGTTGATGTAAATTCGATCATTAGAAGGATCTTTAGGTTTCGCTGTTT
GAAGTGGTGCTAGACCACTTGTCTCTATTTTGACAGGCGGTTCTGCAGCC
TCTTTAAAGGGTTTTACACTTGTGCTTTGGCTTTTAGATGTTACGTCGTC
TGGTACACCATAAAAAATCTT Coding sequence (CDS) from alignment at sc0000164:443586..444406 >TCONS_00013348 ID=TCONS_00013348|Name=TCONS_00013348|organism=Clytia hemisphaerica|type=CDS|length=609bp|location=Sequence derived from alignment at sc0000164:443586..444406 (Clytia hemisphaerica)
CTACGTATGAGCACTTGGCACAAAAAGTTGTCGATTTTTGTTGTTAGCAT
TGGTGGAAAGGTGAAGCTCTGTAACCGAAGCTTCTGGAGAAAATGTGCCT
GTTGGTTTGTAATGTTGTTGATCCTTATCAGATCTATTGTTCGTGTCTTT
ATAGTCTGTTGCAACCTCTCCTTGGTTCAACACATTTGAAAGTTTATGGT
CTGTGAAATTGTTTATATAAATACGTTCAGGTTTTTCACTTTTGTTAGTT
TTCTTGACTGAGGGTTTTACCATTGTATTTGAATGAGTctgtttcaaatt
gtttttgttgtttgcgAATTCGTTTAAGTAAAGATGCAGGAGTCGGTTCG
GGTTATCCTCTTTTAACTTATTGTTTTTGAATTCGTTCAGGTATAGGTTC
AGTCGGTTTGATTTATCATGTTCAGACTTTGGTGTAAACTCGTTGATGTA
AATTCGATCATTAGAAGGATCTTTAGGTTTCGCTGTTTGAAGTGGTGCTA
GACCACTTGTCTCTATTTTGACAGGCGGTTCTGCAGCCTCTTTAAAGGGT
TTTACACTTGTGCTTTGGCTTTTAGATGTTACGTCGTCTGGTACACCATA
AAAAATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013348-exon-sc0000164-1491911889:443586..444406 | TCONS_00013348-exon-sc0000164-1491911889:443586..444406 | Clytia hemisphaerica | exon |
| TCONS_00013348-exon-sc0000164-1510915933:443586..444406 | TCONS_00013348-exon-sc0000164-1510915933:443586..444406 | Clytia hemisphaerica | exon |
| TCONS_00013348-exon-sc0000164-1575043694:443586..444406 | TCONS_00013348-exon-sc0000164-1575043694:443586..444406 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000164 | supercontig | sc0000164:443586..444406 . |
Blast
The following BLAST results are available for this feature:
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