TCONS_00013262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013262
Unique NameTCONS_00013262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013262 ID=TCONS_00013262|Name=TCONS_00013262|organism=Clytia hemisphaerica|type=transcript|length=284bp
GTTTTGAACATTCAAACTTGAAACAGAGAAAGTCTATTATATCAACTTTC
TTCAGTGAAACATTTATTTGTTGATTTGTTGGCTTGGAGCTGAATTTGAA
GGGATAATCGGTGTTTCATATAGAGACGTTATTGAAGATTCATTTCACAG
CAAAGACatatttttatggatttttgaaaaaactaaatgGCACCTGAAAC
TACCGCAACCGCTATTCCTAACAAAACACAAAACGAAATTACTGCTTATG
ACGAAACGCCAAACGAGACAAGAGACATTACCAC
Run BLAST on NCBI

transcript from alignment at sc0000163:38399..38682

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013262 ID=TCONS_00013262|Name=TCONS_00013262|organism=Clytia hemisphaerica|type=transcript|length=284bp|location=Sequence derived from alignment at sc0000163:38399..38682 (Clytia hemisphaerica)
GTGGTAATGTCTCTTGTCTCGTTTGGCGTTTCGTCATAAGCAGTAATTTC
GTTTTGTGTTTTGTTAGGAATAGCGGTTGCGGTAGTTTCAGGTGCcattt
agttttttcaaaaatccataaaaatatGTCTTTGCTGTGAAATGAATCTT
CAATAACGTCTCTATATGAAACACCGATTATCCCTTCAAATTCAGCTCCA
AGCCAACAAATCAACAAATAAATGTTTCACTGAAGAAAGTTGATATAATA
GACTTTCTCTGTTTCAAGTTTGAATGTTCAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007403XLOC_007403Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013262-exon-sc0000163-1491911889:38399..38682TCONS_00013262-exon-sc0000163-1491911889:38399..38682Clytia hemisphaericaexon
TCONS_00013262-exon-sc0000163-1510915933:38399..38682TCONS_00013262-exon-sc0000163-1510915933:38399..38682Clytia hemisphaericaexon
TCONS_00013262-exon-sc0000163-1575043694:38399..38682TCONS_00013262-exon-sc0000163-1575043694:38399..38682Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163supercontigsc0000163:38399..38682 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00554424	0.162802	0	0	0.967231	0.0059082	1.033	1.02232	0	0	2.98838	2.21738	1.86471	4.4448	3.78655	1.73314	2.19648	3.47225	0	4.82846	0	0.407465	0	1.54892	2.60584	0.0811654	2.22141	3.32365	2.5819	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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