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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013153 ID=TCONS_00013153|Name=TCONS_00013153|organism=Clytia hemisphaerica|type=transcript|length=2242bp
ACTATATAACGAGTAGAGGAACAGCTTTTAATAACACTCGAGAGTTAAAA
GTTGTCTTATATGAAAAcgtttgaaattttgtttcagAGCGAGAAAAGTC
TTATTGAGTATGGAAAACTACTTCAAGACGGCAACGTGGGTCATGAAACA
TGATTGTTGGTTTGAGTATCTGCGTCAAAGTCATCAATTACAACAACAGC
TCACTACTTACTTTCAAAGgcaTTCAGCTGCAATTACAAGCTACGATTAT
TTCCCAACGGCATCCAGTCACGTCAGTGTTGGAAGTCACCCTGGTGATTA
CAAGAAGCAGCCTAGCAGTTCAATGGAAGACTCCCCTGTAGTGTGTCTAC
CTCCAACTCTCATTGTCAACGAACGAGTGAGTAACAGTGACAAGTCTTCA
GAGCTATCAGAAGAAAGATTATGCGCCATCTGCAGTGATCGGTCTACAGG
CAGACACTATAAAGTTTATTCTTGTGAGGGTTGTAAGAATTTCTTTCGAA
GAAGTGTCCGAAAAGATGTGAAATATGTCTGTCCGGCGTATGGAAAATGT
CCGGTACATAAAGATCAACGAACTAGATGCAAAGCTTGCAGActgagaaa
atgtttgaaagttGGGATGAGGAAAGAAGCTGTACAATGTGAACGCAAGC
CATTGGTATTGACGCAACTCTCGGTACCGAGTATTGACGACAAAGTGAAC
CGAAACAAAACCATTGGTCTCGATTATCGAACGAGTTCCGACGAGAGCGA
TGACGACAAACGATCAGATCCGTTAACAAACAAAACATCTTCCACATCCA
GTGAAAAAGATAACGCCCTTCTAAATGTTGTCATAGACAGGGTGGATGAA
GAGGGTGGAAGGGCGCTTTTGAATTTAGCTCAAAGTTGCCAACGGAAACC
GATTTCGATAGATAGTGATGAGAACTTGATGCAGTATTCAGAAATAGGAA
CCATCAAATCGGAATGTTCAGACGAAACACCCCCGTCATCTCACACCTCT
TACCCGGCCTATACGGAAAAACCACCAGAAGTGCTCAGTTTAGCACATGG
ACGATTCCACCCATATAACCGTGCAACGTCCTTACCTTTTCGTAACAGTT
TCACACCTCAACATAATGGGTGGACCCTGGATATGTCGACTATgtccaaa
aacaaaaactttgtcctTGAAGCTCCTTCAATTTCCACAACTGATGTCGG
CTATTTATACGAAATTTCAACTCGTTTATTATTCGCTACTCTAGACTGGG
TACAAACGTTAGAACCTTTTCAAAAACTCTGCAAAGTAGACCAATTTACA
TTACTGTTAAATAAATGGCATTCTTTATTCATCCTTGGTATGGCACAATC
TTCACCAATGTTTCCGATATCAACAATGTTGTTTTTGGCGAACACTGGTC
ATGAACCACACTCTGATCAAACCAACACACATCTACCATGGAGCACGTTC
TTGAAATTGAAAGATGTGATAATGAATGGATTCGTGGAATGCAAAATATC
GATGGAGATTTATAATTGCATGAAGATTATCGCTCTTTTTGATCCGGaaa
tCCCTGGCCTTGGGGACCGAGAATTCACCCATCGCACATGCGCACACTCG
CGACAATTATTGGAAGATCTCTTCGAAAATAATCAGAATCCAAAAGACTC
GATGGATAATGATAAGACGAACTTGAATCAACAACGTATGTTTAAAGTTT
TAGAATGTGTGAACACGATACGTAAAGTTGAAGTGACTGATACTTTCTTT
GTACCCATATTGAGACAGACCTCTATTGAGTACGTCATACAAAAGGTTTT
GAATGCAGAGAAAGATTGAGCGGAGAATATTAATCCACGCGTTTTGGATG
GCAACTGCAATAGCATAtaagaaaaaaactaaactacgaATAAAATAAAT
CTAACTCTGATTCTCAGACCTCTACGGACATACTTGAGGATTAGTATAAA
TGGTGGGGGTGAGGATGAGTATTGATCGAGAAGTTTTCCTGTGCTTGGCA
CTAAATGGGAGAAAAGAttgagtttttcatttttagaaaaacttgatAGG
TAGTTGGAAACCCACAGAGAGCGAATTagctgttgaaaattttttttctg
ttttactatgttaaaaacgaaattttcaaaacataattttgggatattat
tattattgtaaaAATTTAGTGTGTTATTTGTATATTATATGATTATATAT
TATCAAATCAAATctatcaaaacttttaaaacatataccatc Run BLAST on NCBI transcript from alignment at sc0000162:243412..258283- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013153 ID=TCONS_00013153|Name=TCONS_00013153|organism=Clytia hemisphaerica|type=transcript|length=14872bp|location=Sequence derived from alignment at sc0000162:243412..258283- (Clytia hemisphaerica)
ACTATATAACGAGTAGAGGAACAGCTTTTAATAACACTCGAGAGTTAAAA
GTTGTCTTATATGAAAACGTTTGAAATTTTGTTTCAGAGCGAGAAAAGTC
TTATTGAGTATGGAAAACTACTTCAAGACGGCAACGTGGGTCATGAAACA
TGATTGTTGGTTTGAGTATCTGCGTCAAAGTCATCAATTACAACAACAGC
TCACTACTTACTTTCAAAGGTATGCTTGTCTTTTCTCTTTTGGAGGATTT
GCTGACCAGAGCAGATAGAGGGGTCGGTCGGAATGCTAGAGTGGGTTTTA
TTGTTTACTATTCCTACACCTACCTTCCAATCCCATAAGGAAGTTGTCAT
AACTTGTTTACAGTGGAGAAACTTTCGCCTCTTAATAATCACCCTAGTAT
ATCTTTTTACTGGAACGCGAATATTCTATTGGTTGTTTTCCAAGTAATAA
GAATGGGCGTGCAATGGGACGTATTGGTAATGATTTTTAATGAACATTTC
CATGAACCTTTCTTCACCCACCATTATTGTTACGAAGAATCTCTACTTTT
CCATGTCATCTTTTATTTACAGCAAAGTAGATGTGTCTGTAGATTTTATT
TCTTTCACATTGTTATTTAAGGTGGTTTTATTTGAATATATTGATTTTAT
ACGTTTTGCAACTTATTGAGTTACTTGTCTGTCAACGTGTTTTAAGGTTT
TGTTAAATAGCTGGCAACTGCGAACCTATAAACCCCTGTCTCTTGATCGG
GCGATGATTATTTAGTAGAGATAATAAGTAATGAAGGAAATAAATGTCAA
AGAGGATGGTAAACAAATGGCTTGTGTTTAGTGGGAGCAGCTAAATGATT
AGAAAAAACTTTTAATGACATTCCAAGGGATTGAAACTTCTTCGTTTATT
TTTTCAAATGTGACATGGGGTGTTTCCATAGTATCGTTATATTGAAGAAC
TTTTTAATTCGATCCACCGTATTGCAATTTTAAGCGGGTTCTCGTCTTCT
GGCGTTTGGACTGAAGAGCATATGAAATGCAAATAGATACTGCCCCAAAA
ATACCTGAAACTACTTATTTAAAAAGCAATTCCGATAGATCTTGGAGGAT
TAGAAAAGGCTTCTCTCCTTGACACGACCAAAAGGGAAAAAAAGCCGATT
CTATGCGGATCATTTCGGTGATATAAATCTTAACATGAGATACATAGGTT
CATAAGTTGCTTAATCAGCCTGTCTTTGAATTGGAAGAACTTAATTTTTA
CCCAAAGTTTACATTTTGACTTTGTTTTTTAATTTTCACCGTTTGTTTTG
ATTGGTGTTGTGAAAATTAAATGGCGAATTTTGTTGGATACCGAGTGCGG
TGATTAAACCCGAAAATCTTGGCCGTCTGATATCTGACGGTAAAAATAAG
TTCAGAGTACAAGCTATCATTTGCTTTGATGTTTGGAAATTTCAAATCTG
AATCAAAAGTAGGTGTTCTTTGCATGTTTTTGGTTCCAAAATGGGTTGAA
TTTGGTCTAGGTTCTGCAACAGTGCTTAGTACTGTCTTTAAATGTTAGGT
AGATATGGATATTATGATGGTGGAATTCACAAACTGATAAGAGAAGGAGG
GGAGATTATTTTGCACACCTTTTGTCTCGTGCAATGCAAGCTGGGAAAGA
TTTATCACAAAATCGCGTGTCATTCTTTAGGCACAAGTGTTTCAAAAAGA
AATTTCATATTTTTCAAGTCACGCCAAACGAAATATACAAATACAAAAAA
AAATTGAAAAATAATTGGATTTTCGTGTGTCGTATGGCAAACTTGTGCTG
TCAACCTCCTGAACATCTTGTTTTCAAAATATTTTCGATTTCTTTTCTTG
TTAGAAATTTATTCAAAATGTTCTCCCCACATTTTAACTCTTCATGACCA
CAGTACATTTTCACCAATGACCTTCCCTACCAGCCATCCGATACCAAGTC
CCGTTTACACAGTTTGACCACAAATTATCGATTTGGCTCGATTATTAAAT
CATCCTGGAAGATTTGTAAATTTTGAACTTTGGTGGGCCTTCTTTTTCAC
TGTTCATTTTGATATCAAATCATTCTGTGTATATATTATAGTGTGTACAT
ATTTCTTCCTTCATATTTACTTCGAATAAGCGTTTCCTTCTTTTAAACAC
CCCTCCTAAAAGCCAAAAAAACTAGTGATCATTACATTCGTCGATTGAAT
TACATTTGAAACACCAAAAAATATCCACATCCCTATTTTTCTGGAAGAAC
GCAGTTTTGGCTGATGTAAGTTTTGACTGATTTCCGGTCAGTAGTGAAAA
GGAGTCATAGGATTCGGAAGCGGTGCGGAAGGTCCTGGGCTCATACCGCA
AAGACTCCAAAAAGGTGCATGATACATCTCTGCTTGATGCTCAGCAATTA
AAGAGAAGAAGCGATGGTAATTAGAGTAATCCAGGGAGGAGAGGTGCCTT
CCCCTACATTCTGGTATTGAAAGAGGAGTCATTGGATCGCCTCTTACCGG
GGTCGCAGACTTACTAATTTTTGGATGGTCTTCATCATTCTCGATGAAAG
TATAACGGGTGTTAGATGGAGCTACAACAGATTTGAAGAGAATTGGTTCA
AGGCTTCTTTGGTCGTGTTGTTTTGGCGGGAAAATCAAAAACTACCTAAA
AATGGCGCGAAATCAATTTTTAAGCTTATGGGGGTATAATAAATGTGTGA
AAAGCACCCTGATCACGAAAATTTAGCAGAAAAATTTAAGCCTTGAAGAA
ATTAATTGAAAAACTTTTTGACATAAACACAATGAAAAACGATTATGAGC
ATGCAGCACGAAACTTTTCGTTTTTTCATGTCACTGTTTAATACGGGAAT
AAGTAAAATCGTGTATTTTGTTTCAAATTTGTTTTCCCCTAATGATAGCG
AAACAAAAAAAACGNGGTTCATTTTGATATCAAATCATTCTGTGTATATA
TTATAGTGTGTACATATTTCTTCCTTCATATTTACTTCGAATAAGCGTTT
CCTTATTTTAAACGCCCCTCCTAAAAGCCAAAAAACTAGTGATCATTACA
TTCGTCGATTGAATTACATTTGAAACACCAAAAAATATCCACATCCCTAT
TTTTCTGGAAGAACGCAGTTTTGGCTGATGTAAGTTTTGACTGATTTCCG
GTCAGTAGTGAAAAGGAGTCATAGGATTCGGAAGCGGTGCGGAAGGTCCT
GGGCTCATACCGCAAAGACTCCAAAAAGGTGCATGATACATCTCTGCTTG
ATGCTCAGCAATTAAAGAGAAGAAGCGATGGTAATTAGAGTAATCCAGGG
AGGAGAGGTGCCTTCCCCTACCTTCTGGTATTGAAAGAGGAGTCATTGGA
TCGCCTCTTACCGCGGTCGCAGACTTACTAATTTTTGGATGGTCTTCATC
ATTTTCGATGAAAGTATAACGGGTGTTAGATGGAGCTACAACAGATTTGA
AGAGAATTGGTTCAAGGCTTCTTTGGTCGTGTTGTTTTGGCGAGAAAATC
AAAAAACTACCTAAAAATGGCGCGAAATCAATTTTTAAGCTTATGGGGGT
ATAATAATGTGTGAAAAACAACCTGATCACGAAAATTTAGCAGAAAAATT
TAAGCCTTGAAGAAATAAATTGAAAAACTTTTTGACATAAACACAATGAA
AAACGATTATGAGCATGCAGCACGAAACTTTTCGTTTTTTCATGTCACTG
TTTAATACGGGAATAAGTAAAATCGTGTATTTTGTTTCAAATTTGTTTTC
CCCTAATGATAGCGAAACAAAAAAAACGAACGAAAAGCATCAAGTCTTTA
ATCTCACACACTGTTCAGCTATTGTTTCTTTTGTGTTGTTGACCCACCTG
AGGGAATCACCTTCTGCGCGCGTTCACTGCAAGCGATCGATTTCGTGCGC
ACGTCAAAGCTAGCGTGACCATTCAACGCCTGTTTGCTTTGTTTCCATCT
TTCAAAATCTGCTTTTTATATTATAAACGAATCTTTGATTATTTTTATGT
CACGAATTTCATGTGTTCAACATTTTTCCCAATTTTACTTTCTATTTCTC
TCACTCTTTTATTCTTTCCATTTTCACAACTCAGGCAAACTGTTGTGTTC
AACCGTTCAGAATTATATCTTTCTTTTGAACTTTATAACAAAGTTACTTT
TTATCAATTTTTCATATCACGCCATCTATACATTTCTTATCATTGTTGAT
TTACTAACTTATCTTTTGATAATTACTCGTTTGACCATGGTGGTTCGGGT
GGTTCACCTGTGGCCACTTCTACTAAATTCTTTTTCAAAAAAGCTTTTTT
ATGAAACTGTCTTTGCCGCCAGCCGGCGGCGTTGTTGAAAAATAAAAACC
TTGATCTCTTTCTTCTATTAGTATCCCGTTAGTATCAGACCCACCAAAAT
GTAAAAAGGAGTAAAATTACAATCTGTCTTAACTTAAAATAATTCCTCAA
TGCAATGAATTGATTTTCGGAACGCAAAGTAAATTTAGCAAGATTACTGT
AAATTAAAATAAAGAATTAGTCAATTTTATAACTTCAAAGTTTCCCCCAT
TTTTTCTTTTGTCGCACTCATCAATAGTTCGTGACACGATCGCATCCGTT
GAATGACTATGCGTGTCAAACGCGATAGGATTTGAGAGTTGACCTTCCGG
TGCGAGAGAGAGCATTCAAACCCTTCTCGTGAGGCGAGTAGCAGATTGAT
TAAGTGCATACTTTCCATTCCCCTGACAACATGTAACCCCTCTGTTTGGC
TTTCAAAAGTCTCTAACTACGTGTATGTCCACTTTGTAAACCCACATCTC
TAACTTCGTGTATGTCCACTTTGTAAACCCATAAAGTTGCTTTAGCTTTT
TAATTGGATTTGTTCAAACGAGTCTTTGAGGAAAATGCGCGGGGGTGGGG
GTTGGGGGTACTTGCGCTGATGGACAGGGTACCTTTTTCACCTGCATGTT
TCCTAGGTAGGAAAACGCCAAGATATAAAATTAGTCCCTCTTAGGGTACC
TTTTAGGAGAATTTGGGGAAGCAATGGAAGATTTTAGGTAAAGTGGAAAA
GTTGGAGAAAATTTTGGAATTTCAGTTCCATTCAGGGTCACTTTTTTCGC
AAATGTTGTCAAAATTTCCAAAAAACAAGTCTCACGTAGGGTCCATTTTT
CGAACCTCAGTGGGACACGCCCGTCGGTCAGGAAGGATAGTACCCTTGCT
TCTTTTTTGTTCTCCTTCCAGTTATTTAAGCAAGAACACATTCCGTAATC
TTTAGAAAGACTGTCAAGACTATTACCCAGGCTAACATTACGTACCTGTT
AAGAAATATACCCTAAAATCCAAACCTTTCAAAATCGTAATCGTCGTAAA
TTTCAAAATGTTCTCCGGCCGACCGATTTTTTCGAACTTTTATTTTTAAG
GATTTTTCCACTAAGGTAGGTAGAGGGTGTTGTAACAATGGGGTATAAGG
CCGATAAAAGGAGGGCGTTAACTAATTTCAAGAATCATAAAAATAGCTTC
GCGCAATTGTTTGCGATGTTTCTGAAAATGAAAATCAACCTTTCTTCATT
GTTTATAGGAAGGCGCCGGTTTTTATTATACCGATCTTGAGCAAGAAACA
GAGTTTGCTACTATGATCGCGTTTATACTGATGATCTGAAAAGATTATCA
AACAATAATTGCGAAGCGTTCTTCAAATTTCCCGTCGAAAATATTTCATT
TAATTATGGAAATTACTCAAAATGAGGCTTTATAAAGAGGTCATTATTTC
CTCAAATAAGCGTCAAATTATCTGAAGACTTCTTTGAAATAGTGTCGACG
CATGCGTGATAACTGTTTGAACGGTAAAATACTGGTGAAAACGTTGCATA
CAATTTCTTCCCTTTAGTCCCCAAGATGAGCTTTTCTTCGAACATTGCTT
CTTATTACTATTTCGTGTTTTGTTTTCTTTCTTTTGACCCATGTCTTACC
GCGCGGTGAAAATTTTGAATCATTTTTGTTCGATCTTTTGGAAAATCAAT
TTATAGAGGAGTGAATCAAATTTTTAAAAATATTGGAATTTTTTTGATTT
TTTTAAACTTGGTATATTCTTTGAAAATTCTTTTGGACGATGATAAGTAT
GGTCAATGTGAAAAATTCGAGGTAAAAATTCCGTCCACTCTTTTTTATAA
GAACCATTTTAGTTGACGTTCCGCTGTTCTTAATTTCAGCCTCTTGTTGT
TCTTATCTTGATCTTATTTTTTAGCTTTGTTGTTCTTGCAAAATTGAAGC
TAGAATGAGATGCAGGGATGTAAATGTAGTCGTATTTTTCTGTTTATAAA
TTCAAATCAGAACTGTTGTACGGTATGCAGCCGTGACTTGAATTGTTCAT
TCTCAGGGATACCTTTTGGGTCCTCTAGAGTTCTAGAATGGTGTTTAACT
CTATGTGAGTCTGAATACTCACTCTGATATTCTATACAAAAAATACCCAT
CATCAGTTTTATACATAAAGGGTTGGACTCTCTTTACTCCTTCCCTCTAT
GCAATCAGCAAAAGAATTTAGATGATATGCAACTGTAACGTAATACCAAT
TTTAATTTTTTTCTAAAACTTATAACAAAAGTTCAAACTCTGTATTATAA
AAGCATATCAAGTGAACTTTATTATATGATATATATTTTTCTTTCTCTTA
CGATTGTTTTTTATCATTCCTACTCATGTTGTAAAGCTTTGAGTAGAGGG
AAAGCTTGCGTGACTTAAGGGGTGGCTTGTCACGCCATACTTTTTAACCG
TTGTCTATCCAAGTTGGGTCAGATCATTCTAAGCGTTATGTATCTTAATG
ACGTCGATTTTTGCGCAAAAATTTGACCCCATAACCAATATTATTATTCG
GGACGTCCCTTATGTTTAAAAGGTCAAATGAAAGAGATTGAACCCCCGTC
TTTGGTTATGAAACAGTATCCTTCAACAATAGCTTGAAACTGCGTTGGTA
GTTTTTCTCATAATTTGACTTTCTGATAAAATATCGAAAACGAGGTCACT
CAAACATGGGGATTTGATACATGACATTGTGAAAGACAGAAATGAGGACT
TGCTACTGGCTAACTCGTTTTAAAGGCGCTCTTTGATTGGTTCGTTCCAT
CTACAGTTACGAAATGTAATGAATATGTCGTAAGACAAAAGTTGTAGTCG
GAGGTTATGAATCAAAAATATTGAGATGAAAAGTGAAAAGACAGACGTTA
CACATGTAATATTAAAAAGTTCGTTGACTTCATCAATTTATAAACAACTT
ACAAGATAAAAAAGGCTTTTCTCTTCGAAACCAAGAAGGTTGGGAATGAA
GACAGTTTGGAGGGTTTTAATGGCAAGTTGACCTAGCCCAAAGAATAAAG
TTTTAATGAAATTGTATTTTTTTCTTCAGGCATTCAGCTGCAATTACAAG
CTACGATTATTTCCCAACGGCATCCAGTCACGTCAGTGTTGGAAGTCACC
CTGGTGATTACAAGAAGCAGCCTAGCAGTTCAATGGAAGACTCCCCTGTA
GTGTGTCTACCTCCAACTCTCATTGTCAACGAACGAGTGAGTAACAGTGA
CAAGTCTTCAGAGCTATCAGAAGAAAGATTATGCGCCATCTGCAGTGATC
GGTCTACAGGCAGACACTATAAAGTTTATTCTTGTGAGGGTTGTAAGAAT
TTCTTTCGAAGAAGTGTCCGAAAAGATGTGAAATATGTCTGTCCGGCGTA
TGGAAAATGTCCGGTACATAAAGATCAACGAACTAGATGCAAAGCTTGCA
GACTGAGAAAATGTTTGAAAGTTGGGATGAGGAAAGAAGGTTTGTCTTCA
GTTTTCATTCTTTATTTTGTAGAGAAAACTTTCTTTCAGTAGAATTCCAG
GATGAATATTCTCTTAATTTTCGACCCATTGCATTTTCATATTTCGCTTG
CATTCAGAAATCATATTATTTTAGGGTCAAAGATAAGAAACAAAATTTGC
TTATCAAGAAACAAAACCCAAACACCTGCAATACACACATCATACATTCT
CACTTTTTCTAGGCTCTTTTGGGAAAGAAAACTCCGCAGAGTCTTTAGGG
TACGTAGAAATTTCAAAATATTTAACAGTAAATTGTTGGCTAAAATTTGA
GTTTTATTTAATTGGGCTTAGTTGGCAGGATCAGGATGATGAATTTTAAG
CTCGATTAGTTAAGGACTCAATACTGTAGGAATAAGGTTGCACAAAACTT
GACCCAGTTTGAAAAAAATATCAGGAAACTTTACCAAATATCAAATTAAT
TATAAATATTAACATGCTGTCACGTGAATTTTCTTAACAGAGAGCGAAGA
TAAAAGACTCAGCATTGATAATCAATGTTTTTAAAAATAGACGTTCTTAA
AGCTTCTCGAGGTTGTGTTATGTTTTAAATTTCTGCATGACATCGAGCCA
AGGTCAGAAATTCATTAATTGTCCTGTCTCAATACAAATCAAATGTCAAA
AAAAACTCCAAAGATGGTATCATAATCTAAAGAATTATATGCAAACCCGA
TTAGAATTTCTCGAAAGTATTTTTCTCCTCTATTTTTTAATGATTGCGTT
AGTGGTTTTACAGGGACAAATAAAAGTTATACTGTATACTAGTGTCTCAC
ATAACTGACTATCAAAATATCTGATAACAATTTCTTTTGTTTAACCTTTC
CCTATTGTCCTTTTCATCCAATCAAGATAAGTTTCTCATGAAAATCCAAT
CAGTTCAATGACATCATTTCTCTTCGAATTCAAGTTTTGGAAAGTCTCTC
GGAACTCCTCTTTTTTCCTGGAAGATTGAGATATCTTTTTTTCATAAGAA
GCCGTAAAATTTGGCTGAGATTTGGCTAATCCTATTATGATTGGGGTTTT
TGGGAACGAGTGTTACTAACATTATATGTTCTCACTTTACTCACTTATTT
AGTCAAATGAGTTTAATATCTTGTAGAGAATCTTCTTTCTCTAGAGTTTT
AAATACATAGTAGAGCTGTCAAATGGGCTTTTTCTTGGTCGCATCTGAAA
TCTGACGTGAAAAACGGTCTTATCTGTCCTTAGTTTTTTTTCCTTATAAA
ATTGTTCTTAAAAACGTGTCTTTCAAAATTTTCTTTCCTTGTTTATTAGC
TGTACAATGTGAACGCAAGCCATTGGTATTGACGCAACTCTCGGTACCGA
GTATTGACGACAAAGTGAACCGAAACAAAACCATTGGTCTCGATTATCGA
ACGAGTTCCGACGAGAGCGATGACGACAAACGATCAGATCCGTTAACAAA
CAAAACATCTTCCACATCCAGTGAAAAAGATAACGCCCTTCTAAATGTTG
TCATAGACAGGGTGGATGAAGAGGGTGGAAGGGCGCTTTTGAATTTAGCT
CAAAGTTGCCAACGGAAACCGATTTCGATAGATAGTGATGAGAACTTGAT
GCAGTATTCAGAAATAGGAACCATCAAATCGGAATGTTCAGACGAAACAC
CCCCGTCATCTCACACCTCTTACCCGGCCTATACGGAAAAACCACCAGAA
GTGCTCAGTTTAGCACATGGACGATTCCACCCATATAACCGTGCAACGTC
CTTACCTTTTCGTAACAGTTTCACACCTCAACATAATGGGTGGACCCTGG
ATATGTCGACTATGTCCAAAAACAAAAACTTTGTCCTTGAAGCTCCTTCA
ATTTCCACAACTGATGTCGGCTATTTATACGAAATTTCAACTCGTTTATT
ATTCGCTACTCTAGACTGGGTACAAACGTTAGAACCTTTTCAAAAACTCT
GCAAAGTAGACCAATTTACATTACTGTTAAATAAATGGCATTCTTTATTC
ATCCTTGGTATGGCACAATCTTCACCAATGTTTCCGATATCAACAATGTT
GTTTTTGGCGAACACTGGTCATGAACCACACTCTGATCAAACCAACACAC
ATCTACCATGGAGCACGTTCTTGAAATTGAAAGATGTGATAATGAATGGA
TTCGTGGAATGCAAAATATCGATGGAGATTTATAATTGCATGAAGATTAT
CGCTCTTTTTGATCCGGGTAAGATTTCATTCTTTGATGATTGTTGCACCC
ATTTCTACACCCCTTTCTCACAGACCCAGTAGAATTCTCAACTTCAGTTG
AGCTAGAATCTGACAATGTATATATGTCTGTCCGAAAACTTTGGGACAGG
CTTGAGACTTCAAAGATGGTCGAATTTGGCTGAAATCTAGCACACTTGTT
GCTTGACTGAATATCTGGGGTGTCTTTTTTATTTTTTGAAAGTTTTCATT
TATAAGGGCTTGGTCATGAGTTTTAGCTCCAAAACGAGGCTGAAACTTTG
GGGGTAGGCTTGAGACTTGACTAGGTTTTGGCTGAAATTTGGCCCACTTG
TTCATTTGGTGAAAATGTGATTTTTCATTTTTTGAAAATCTTTGGAAAAA
ATGGAGTATAATTTTCCACTGGGGAAGATATTTTGGCCAATTCTTCGAGT
AGGAGGGGGTCCCACCGGGTCTGTGAGAAGGGTTATATTTCTGAAGTCTC
AGAAAGCTAGTTGAGTTCACAATGATCACTATAAACTAACAGAGAGTCCC
ACCAAAGCTATTTTATTATTCCACTGGAGAGAGCGTTATTCAGAAACTAC
AAGAAAACTACTTTGAATTTTGAATTTCTATCAAAAAATTTATTACGTTG
AATGACCACATAAGGGAACCAGTTTTTTACGGTCTAGTCCATTTTCCTGG
CTCCCAGAGAAAATTGAAATGCTTTTTTTACCTCTATTAATTTAGAAGGT
ATTTACTGTAATTTAAATTTAAGAAAGACTGGAAAATAGATGTCTGCATC
GTAACCACCTTTTGTTTTGGAAAGTCAGGGAATCCCTTTTCGTTCTTAAT
TTTCCATCATGACATATTCACGACAGACTTAATTAATTCACCGTTTACAT
TGTGAAAAGAAAACGTCATTTTAAGCTGTAAGCTCATCAGTGCACGCAAG
TCACAAACAATACAACAGAAACAGTAGGAAACGAGCTCACGAGACACTTC
ATGTGCTTATATATACCGAGTTCAACGGATTTAATGATGAAAAGAATATA
AGAATAAAATGAAGTAACGAAATTCGTGAGTTCAACATGGGCTTGAAATT
TCACGAAATCGACCTAAGTCTTTTTCTTGACTTCCTTTTGAACAGTGAGA
AATCCCCATTCATTTCCACTAGGTGTGCGGGCTTCACTTTCAAGCATTTT
ATTCTCCATGCTCACTCACTCGAAACACAGTCTTATGTACTGGAGATTTT
TAAAACTTAAACTGTGAACACTGATAGCCCTGATAGCCTTCTCACCCAAA
AAGGCCAGATCTCTTAAAGAGCGAGATTGAAGTTTTACTTGCTATTCTAC
TCGAAGTCATATCCAAAAAAAGGGGAAAAGTAAAATTTCTCAAAAAAGAA
AAAGAAACTGCGAATCTCTAATAACTGATAAACTTTCAATCTTTTCAGGG
ATAATTTTACTTCAATGATTATATACACGAGTCTGAAACTTTGCGTGACT
CCCACTCCATAATATATCTCCCTTTATTTATTTTCAGAAATCCCTGGCCT
TGGGGACCGAGAATTCACCCGCCGCACATGCGCACACTCACGACAATTAT
TGGAAGATCTTTTCGAAAATAATCAGAATCCAAAAGACTCGATGGATAAT
GATAAGATGAACTTGAATCAACAACGTATGTTTAAAGTTTTAGAATGTGT
GAACACGATACGTAAAGTTGAAGTGACTGATACTTTCTTTGTACCCATAT
TGAGACAGACCTCTATTGAGTACATCATACAAAAGGTTTTGAATGCAGAG
AAAGATTGAGCGGAGAATATTAATCCACGTTTTGGCTGGCAACTGCAATA
GCAAATATATAATAGTAAAATAGCAAAAAACAAAAAAATAAACTATGAAT
AAAATAAAACCAACTTTGATTCTCAGACCTCTACAGATATACTTGAGGAT
TAGTATTGATCCAGAAGTTTTCCTGTGTTTGGCACTAAATGGGACAAAAG
ATTGAGTTTTTCATTTTTAGAAAAACTTGATGGGTTGGAAACCCATAGAG
AGCGAATTAGCTGTAAAACCAATTTTTTTTCTGTTTTACTATGTTAAAAA
CGAAATTTTCAAAACATAATTTTGGGATATTATTATTATTGTAAAAATTT
AGTGTGTTATTTGTATATTATATGATTATATATTATCAAATCAAATCTAT
CAAAACTTTTAAAACATATACCACCAAAAGTTTCGAATATTTTTTTTCTA
GTGGAATGAGTCATACATTTACGGCGATTTTTGGGATTTCTGATATTTTC
TTGGGGGTTTGTAGTTTGTATATTTGTACTTTTAAGGGGTTTTGCAATTT
ACGGCTGAAGGTGATTGTACAAAAAAATTTAAGATATTAAGTTGAAATGT
GTACAAGATACTTGGCAAATCAGCTAAAATGAAAAATATTTGCAGTTATT
TAGCGAGGTTTTTACACCCCTTTTTCTGAGTTTTCAGGGTTATTTTCAAA
CTTTTTTTTTCCCGTTGATGGTTTGTCAATTTTTTTTTTCTTTTTCGAGT
TTTGTTTAAACTTCATGATGAGGTCATCGCGTAAGTACTGATTTTGTTAA
GGGGTTTTTGTCGTGAGCCTTTAGCACGCTATATAGAGAGCATCGTCTTG
CATTTCAACGTGAATCGGTAAGCGAAGAAAATTTTCAGATTTTCGATTGG
AGTAATATTTTGTAGATGAAAGGAAATATAAATCAAGTTGAAACATAGCG
TTGAAACAGTGATGATCCTTTAATGAAATTGGGGAGTTGGTCTGAAGTTT
TGGTGATGTTTCTTTTTTCTTTATGAAGAACAAAACGAAAAATCTGATTT
TTTAGTTTGAATACTTGAATACTTTTTATTGGAAGAGTTCCATTTTAACT
AATTTACTATTTTACACCATTTCCAATAAAACGATTCCAAAAATGATTTT
TTTAGTTGTTAATTTTTCACAACATAACGAGATCTTGCATAACAAGCAGA
GCAGGCCAAATTTTTTGTGGATAGTTGATGGATATTCGAGTANGGGCGGG
GACAAAAATCAGAGTATAATTTTCTACTGGGTAAGATATTTGAGCTAATT
TTTCCAGTGGAAGGGGGTCCCACTGGGTGTGTGATAAGGGGTGTATTTCT
CATGTCTCGGAAAGCCAGTGGGATTACTATAATTAAACCAACAGAAAATC
AAAATATTTTCTAATGCATAGAGTATGATTCAGCAACCTAAAAAATACTT
GGATTTTGAATTTCTATCAAGGAAGATTAATACCAATTTTTATGGTCTAG
TCGATTTTAATGGCTCCCAGAGAGAACGATAATGATTTTTTACCTCTATT
ACTCGAACTAGTAATTCGAGTTACTTAGGGGGCATTTTCTACAGTTTGAA
TTTCAAAAAGACATGGAAAATAGATGTTCGTATCGTAACCGCCTTTCGTT
TTGGAAAGTCAGGGAATCCCTTTTTCGTTTCTTATTTTTCCATCATGACA
TATTCACGACAGACTTAATTAATTGACCGTTTACATTGTGAAAAGAAAAC
GTCATTTTAAGCTGTAAGCTCATAAGTGCACGCAAGTCACAAACAATACA
ACAGAAACAGTAGGAAACGAGCTCACGAAACACTTCATGTGCTTATATAT
ACCGAGTTCAACGGATTTAATGATGAAAAGAATACAAGAATAAAATGAAG
TAACGAAATTCGTGAGTTCAACATGGGCTTGAAATTTCACGAAATCGACC
TAAGTCTTTTTCTTGACTTCCTTTTGAACAGTGAGAAATCCCCATTCATT
TCCACTAGGTGTGCGGGCTTCACTTTCAAGCATTTTATTCTCCATGCTCA
CTCNATCTTTTTCTTGACTTCCTTTTGATCAGTGAGAAATCCCCATTCAT
TTCCACTAGGTGTGCGGGCTTCACTTTCAAGCATTTTATTCTCCATGCTC
ATTCTCTCGATCTCTTAAAGAGCGAGATTGAAGTTTTACTTGCTAATCTA
CTCATATCCAAGAGGGGAAAAGTAAAATTTCTCAAAAAAAAAAGAAACCG
CGAATCTCTAATAACTGATAAACTTTCAATCTTTTCAGGGATAATTTTAC
TTCAATAATTATATACACCAGTCTGAAAGTTTGCTTGACTCCCACTCCAT
AATATATCTCCCTTTATTTATTTTCAGAAATCCCTGGCCTTGGGGACCGA
GAATTCACCCATCGCACATGCGCACACTCGCGACAATTATTGGAAGATCT
CTTCGAAAATAATCAGAATCCAAAAGACTCGATGGATAATGATAAGACGA
ACTTGAATCAACAACGTATGTTTAAAGTTTTAGAATGTGTGAACACGATA
CGTAAAGTTGAAGTGACTGATACTTTCTTTGTACCCATATTGAGACAGAC
CTCTATTGAGTACGTCATACAAAAGGTTTTGAATGCAGAGAAAGATTGAG
CGGAGAATATTAATCCACGCGTTTTGGATGGCAACTGCAATAGCATATAA
GAAAAAAACTAAACTACGAATAAAATAAATCTAACTCTGATTCTCAGACC
TCTACGGACATACTTGAGGATTAGTATAAATGGTGGGGGTGAGGATGAGT
ATTGATCGAGAAGTTTTCCTGTGCTTGGCACTAAATGGGAGAAAAGATTG
AGTTTTTCATTTTTAGAAAAACTTGATAGGTAGTTGGAAACCCACAGAGA
GCGAATTAGCTGTTGAAAATTTTTTTTCTGTTTTACTATGTTAAAAACGA
AATTTTCAAAACATAATTTTGGGATATTATTATTATTGTAAAAATTTAGT
GTGTTATTTGTATATTATATGATTATATATTATCAAATCAAATCTATCAA
AACTTTTAAAACATATACCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013153-exon-sc0000162-1575043694:258065..258283 | TCONS_00013153-exon-sc0000162-1575043694:258065..258283 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1575043694:250495..250904 | TCONS_00013153-exon-sc0000162-1575043694:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1575043694:248267..249184 | TCONS_00013153-exon-sc0000162-1575043694:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1575043694:243412..244106 | TCONS_00013153-exon-sc0000162-1575043694:243412..244106 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1510915933:258065..258283 | TCONS_00013153-exon-sc0000162-1510915933:258065..258283 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1510915933:250495..250904 | TCONS_00013153-exon-sc0000162-1510915933:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1510915933:248267..249184 | TCONS_00013153-exon-sc0000162-1510915933:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1510915933:243412..244106 | TCONS_00013153-exon-sc0000162-1510915933:243412..244106 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1491911889:258065..258283 | TCONS_00013153-exon-sc0000162-1491911889:258065..258283 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1491911889:250495..250904 | TCONS_00013153-exon-sc0000162-1491911889:250495..250904 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1491911889:248267..249184 | TCONS_00013153-exon-sc0000162-1491911889:248267..249184 | Clytia hemisphaerica | exon |
| TCONS_00013153-exon-sc0000162-1491911889:243412..244106 | TCONS_00013153-exon-sc0000162-1491911889:243412..244106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:243412..258283 - |
Blast
BLAST of TCONS_00013153 vs. Swiss-Prot (Human)
Match: RXRB (Retinoic acid receptor RXR-beta OS=Homo sapiens GN=RXRB PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 7.100e-26 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 350 PPTLIVNERVSNSDKSSELSEERLCAICSDRSTGRHYKVYSCEGCKNFFRRSVRKDVKYVCPAYGKCPVHKDQRTRCKACRLRKCLKVGMRKEAVQCERK 649
PP L V + +RLCAIC DRS+G+HY VYSCEGCK FF+R++RKD+ Y C C V K QR RC+ CR +KCL GM++EAVQ ER+
Sbjct: 181 PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQ 280
The following BLAST results are available for this feature:
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