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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013070 ID=TCONS_00013070|Name=TCONS_00013070|organism=Clytia hemisphaerica|type=transcript|length=3581bp TGACCCTAAAAGGCAAAGACATAGCACTTGATATCATGGAGagagaaaat aaaaTGGAATGGATGAACACAGTTGTTTCACTTGTACACAATGATGAAAA TAGATCTGAAAATGACGTGGAAGAAGTCATCCAGGAAGCTGAAGAAATAC TTCGATGTTGCATTTTTAAACTATTAGAAAAAGTAATTCACCAAGAAGTT GATAATGGacagtttgatttttcttcgtTACCAGAACATATCACTAAAGA GCTTAAAGCCATCAGAGAGTATTTGATTAAATGTAAAAACTCTGATGACA GTAGTTATGTACACCATCAAATTATTGCAGTTATGGACTCACAACTTGAT TGTACTTTGAAAAGACATCATCAGACATTTCATAAACTAACAGCTTCCTT GGACCTATCAAGTgagtttaattttgcatatGAATCTTTTGTCAGAATTG CCAAGAGATTTATTGATGGTGAAATTACTTGGTTTCGTGTTGTTTCTTTA CTTTGTTTTGGTGCAGAATTGTCAGTAGCTGTTATAAAGAAAGGTGGACC TGGTGTTCAAGGTTTCATCAAACGTATAGTGCATTATGTTACAGAGTTTC TATTGAAAGAAGAAGTTGCCGATTGGATATCAACTCATGGAGGATGGctG ATGATGGTAAATTTCTTTGATTCTGTGGACTGTCCACATCGTCACGATCa tttgtttgatttgattttcatcacTGAAACTACCTCTTTCGAAAAATGGG TAAAGAGGATTGCTTTTGGAACCGTCCTTCTAGGTATAGGATATACCATC AGTAAAAGATTGTCATGATTTAACTTATCATAATTTTGGAAAGGATCTTG AAATCAAACCCTGTTCTACTTATAATAGGAAACTTAACGTCATTTTGCAC GAGCTCTGTTTTGTAGattattttgatatattttacaTTTAGTTCTTTTT ACATTACcactacactctttttttatattatttattgcaTCTTTACGTAT ACatcttgttattgtttttaaataattgAATTAGCcttttaaaataaaac gaacacttagaaattagatgaattttttgcatcaagaaaatatattacaa ttttaggTAGACGCAAATGCAAGCAAACATCTTCTGATGATgacttattt ttcttttagctttttaattttgttcttttttgtgaaatttgttttttatt tttttaccagTAGTGAAGTGGCTTGATCAAAACTTGGGAGGCAATTTAAA AATTAGTAATCTTGTACCCCTTTAAATGGAAAAGTGTTAAAATAAGAGTT AGTATGCAATATGATATATGAACATAAGAATGGaatatttgccaaaatta atgaTCTAATGATTTTTTAAGGCCCCTTATCATTTTATCAACCTCTGAAA AAGGCTGTTTTGATATGACAATTACCATAATCATCATTAAATTCCATACA TGGATATTCTTCTTGCTTCAAATTATTTATAAACACTTTAAAAGCGTTCA AGGAACAATAGGCttcttaaactttttttatcGTCTTTGTATTATATTGT TATTatgtattttataaaatatatacCATCTTGCAGAGTCTTCTTTTTTC TGCCTCATCTTGTAGCTTACCACCAGATTGACCTcggttttttattttct gttggACGCTTACTTTTTGAGTTTACTATCATCCAGcaataattcttttt tgattttagcaaaagaaaaaaaaaggaaatacttGTAAAAAAGCAACATG GCAGCTGCTGCACCAGATCCCAATGATGATCCCaacgaatttttcaaaag acgTCCACCATACGATAAAGATGTCTCTTTTGACCAGACCAATCTTGAAG AGGATGAAAAGCAAGTCGCTGaagaatcagagaaaattttcaaaacattt ttatatactCGATTATTAAGTGATATTGAGCGTGACTCTGAGGACGGTGA AATGTGTGTTGGGGAGATCACCACTCCCGTCATTCATCAGATTCGTGATG AGAAAACTAATATGGAGGAGCAATTTAATCAAGATGaacaagataaaaaa attcttgaactGGGACAAATGTTGGCTGCCGTTGGTGATAACTATAATAA AAAATACGATTTTCAATCCATAGTTGGTAACTTGAATATAGAACATGAAG AATTTGCTTATACTAGTTTTACAAACGTTGCTCGAAAATTGGTTGTAGGT GGTCTCAACTGGGGTCGTATTCtggctttgtttttatttggttATGAAAT CGCCCTTAGTTTTCTTCGAAAAGGTCACTCAGGTGTTTATGGTTTGTTAA AGAGAATTTTGAAATACATGGTTAAATTCTTGTTCAAAGAAGGAATTGTG AATTGGATCATTGAACAAGGAGGATGgATAAAATTCAAGTTGCAAGAAAA TCGAGAGTCGGTCAACTATGCTCTTATGATCCTTGCCTCTCTGTTAGCTG GATATGGTGCTTACAGACTTTATAATCGATGAAAACTGGAAAATGTCTAT TATGTGTGTGTATGTCTTATATGACATCTCTTTGTTTTCCTGTCCAACAA CATGTTTGAATGGAAAGACATTTAGGCTGGATCCCGAAGTGATCCCTGTT CGCTCACTCCATCTGTGAAATGATGATGGATCTTGAAATAGCCCaaagca ttttttaaacaaattttttttaaagtctttttgtccattttgcattttta ataaaatgaatGCAAAACGTAAGATTGTGGACCACGTGTTttgtttctct tctttcttatatttgcatttttctttaaatttcttttaaggTTTCAGTGA ATGTTGTTTTCGAGTCGGCGATgcaaatccttaaaatgttcttaacttgt tcttaatattttagccatcgaagccttatgttctatatagtttgttctta taaaagacgggtatttaattttcaaataaagtacATGAAATCTGGTGTCT TTTGCTCTTTCGactattttttttgtcttttttgattCGTAATTGATAGT CGATCTATCAATTGCGATTTTTTGTTCACCAATTTCATAAAAGATTTTGC ATGTTATTGAAAAACTTGCTTCTGAAGATACCATACGGTCTCTTTGTTTT GCATTTGACGTCGTAAATTATACATAGTATTTAAAATAAGATGATGAAAT TATGCTATTTTCTTATATCTTTTGTTGTGTTTTAGATATTATATCCATTA GGTCccattttttattaaaagatgGGTCAATTTTTAGAAATGCAGGACGT CTAAAGAATGAATATTTTGAATTCAGACGGACTGCAAAATTGATGTTAGG AATTGCATGTTTGAATTGGTATTGTTTCTGAACACTTTCCCAGCAAATTC ACTTTTATAATTAGGGACGAATTGAATCAGTAGAATAATTTGATCAACAC TTCGATACTTTAACGCCTTTATTACCATGCTTCGAATTGTCGAGAAGGAT GAACAAGACAACAGAACTCTTTTAGtaatttatatattatattatgaTAA AAATTAATGTATTGTCGTCAAATATGaaatatttatgatttttttgacat GAAGAATAGATTtaatattgccattttaaaa Run BLAST on NCBI protein sequence of TCONS_00013070-protein >TCONS_00013070-protein ID=TCONS_00013070-protein|Name=TCONS_00013070-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
TLKGKDIALDIMERENKMEWMNTVVSLVHNDENRSENDVEEVIQEAEEIL RCCIFKLLEKVIHQEVDNGQFDFSSLPEHITKELKAIREYLIKCKNSDDS SYVHHQIIAVMDSQLDCTLKRHHQTFHKLTASLDLSSEFNFAYESFVRIA KRFIDGEITWFRVVSLLCFGAELSVAVIKKGGPGVQGFIKRIVHYVTEFL LKEEVADWISTHGGWLMMVNFFDSVDCPHRHDHLFDLIFITETTSFEKWV KRIAFGTVLLGIGYTISKRLS Run BLAST on NCBI transcript from alignment at sc0000162:62758..83256+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013070 ID=TCONS_00013070|Name=TCONS_00013070|organism=Clytia hemisphaerica|type=transcript|length=20499bp|location=Sequence derived from alignment at sc0000162:62758..83256+ (Clytia hemisphaerica) TGACCCTAAAAGGCAAAGACATAGCACTTGATATCATGGAGagagaagta
tttatttttattttcttaatagTTGATAGTAGAtatatttatttgtattt
ctATGTATTTATACATAATAGCTAGGAAAGTTAAAAACTCGGCATTATAC
CGtcagagtgggtaacttgcatcagtggacagttacatcaaaatgcctcg
aaaatgtcaatatgaaaattgtgtaatcagagaacgtatgtctcgctcat
tataaaaaggccgacacaaactttcaataattggattgtaacatcgagtt
aagtctcttttgttaagtcacgtgacgataaatgtatcaaggtctgtttt
atttaccccctggtgatcaccagggggtaaataaaacagaccttgataca
tttatcgttcttttcaacttgacgattcgtttaaaactcagcctcctaaa
tatttggggtaggtaaaatatgtacaaagaaattcatacttttccaaccc
ggcgaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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acttatgtctttttttttcgcgtccttttccgtgattacttttatttata
tttttaaagacaggtaagaaggcatattgatgtaactggtggaggctaac
atgcatagccctaaaatgaatgacctggctggtcattaaaataaactata
atcagctctgctcgcagctctactctaccatttttgttttgatttaactt
tgtattttaatgaccagacgggtcatttatttgagggctatggcATGTAG
CCtcaactgatgcaagttacccactctcacggtacagtatagacctaact
cttcactcctcaccctatgctgcactcaagcacttaagccaaagtcccgc
aaaggcgggacaaaaatcagttttttgaagtttgcaaaaaaacgccacat
agaacagtcatcaggcacatcctggcaaatgaacggggtgagcatttgca
atTTGCAtggcatggggtattcgtcacccagtgtaaatgagataggacgt
ctgaggctaaaagcgtgaaaatgaataaaaataaacttcaaactgaaaaa
gggaaaaaaaggaagaaaactgggaactttattttttcgctaaaagtttc
ttcaatcttcgaagacaaaattgacccatggaaaaaaaattcatctatgc
agttctttgaaatgaagcaaaatatttccaacccggttcaattaaactgg
gtattcgaccatattacgtcactttcgttttcgacccagttcatttgcca
atggtcgcatgTGAAAAAtacccgttcatttgccaggatgtgccaggacc
ctgccgacgcaccggactgtccggtgtatttgtccggtggcaaaaagtat
cctttcgctacaccggatgcaataagtccggtgtcagtccggtgttgcNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNatacagggaattttggacgccggacat
ttacgaaacaaaaaattaagaaacaccggacgcaccggactggtcatgtc
cggtgttttgattgtccggttgAAAAAAATATCGTTCTtcaacaccggac
atccgacttccttaagagCAGATGCAGCTAAGGATCAGAAATATGGAATT
AGGGGGGTCctcagattttgatgaaatttggcacatatgTGAGGAACCTT
GAGCTGATCACATCCAGAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNN
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Cccttttaatgttttaatttttgcctgtaggtcctttgataaatcttttt
tgAGAGTGTACATGATGGAtccaaacattttttaaccaatatatcaaagt
tttatttcaaaatttccttcaaaatatGCAAATTCTCTCAATCTTGAGGC
AAAGAGATGGagaaaaaaagtatgaaaaaagtggaatgaAGGAGTGAATG
TATAGAAATAATGGCTAATGAAATAATATCTATGTGATTGTTTTCGTTTT
TCGATTGTTGACTTTGGTCAGTTGTGTGTTCTCTTCAATCATTGCGTTTG
TCTCAAACCTGAAAATATAAAGTGCTGAAGTGCTTCGGTAAGATAGTGTC
GGGTGTTGGATTGACACatgcttttttcaatttttctgctTGGCCTGGTG
CAATTGATTCAAACACGGTGTCAATGGCTGATAAACTTTTTCTGACAAGC
ATTTTCTGGTTCTTTTCATCCAAGCCATCAAAGTCTTTATGTAGTTAAAA
TGTCAATGGCTCCCATTCACTTGACATGCTACTCATGGATCGATTGAGGA
TTTCTTTTTCGGAATATTGAGGCTCAGGTTCATAATCACTGTCAGCAGGT
TCTCCTTCTGTTGAAACAATAGATGCATTTAGGTGGTCAGGCTGATTGTC
ATCCATTGAGAATAAGGAAACCTCCATCTCATTTGTGTCATGCATTTCAA
GACATAGACAACACCTATGACCTAGgtctattttgttttgttccatTAAA
GAGGAATGGTATTCCTGCACCATTTGGAACCAACTTGAATGACTGTTTTC
TCTCCAGCACTAGAAAAGAGAAGGTGGCACTGTGCTGCTGCTGAAATTGG
TATTTTGCGCATATTCTTTGCTTTCAATTTTGNAaaccaaattttaaaat
aatatatgCTGAAATTAATTTTACCTTTCCTATTTACACTTTTTTGGGGT
CACCCAGTagaattttatatcatttttagaATACTGTAGTTTAAaacata
ttttatcaaaattatgatCTAAAACCATTACAGCCACTTTTATATTTCAA
atgatcaaaaaaattttgatagtgcttcttcaaactttttcttcaaatga
GCCTTCATAGAAGTAacattatatatttaaaaaatgagaaaaataaataa
aaaatcctcatattttgaaggaaattttgaaataaaactttgatATTGGT
TGAAAAATGTTTGGATCCATCATGTACAGTggtctcaaaaattttttttt
tgactttaccTGAAAGTAATCCATAAGTTCTTcatgtgtgcaaaatttca
gctcaaTTGGATAAATATTGAAGGAGTTATAGCAACtttaattctggtct
gtaaattaccggTCAGTAAAATAGACTTTTACAAAATTGGGCATAACTTT
CGAACCGCTGGTGCTAGAACGCTGAAATTTTCTGGATGTGATCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgcgt
gtccggtgttcgttaagtccggtgcgtcagcAGGGTCCTGATGTGCCTGA
Ctgtagaagatctttcaaattcagtatgtgaatagatctatttttccttt
ttttcgcaaaagttctaggaatgaaaataaagagatcataataataattg
aatactatccattgacaGATAGATGACCTGCGGCACtattgtaaagctag
aatcgcttcgcgtactctcgcttgagaaaatgattgacagattgaagttt
ttcacccgcgcaggagttcgcggagcgttttcggctcaatcctcggaccg
cgctaaaaatggtagactgagctgtgatagatcatttcgatggaagttgt
tggaatgtttacaaggctcttgacagaaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtctggtcacgtgaccatccgtgattttagaccaatgaaaa
cacttcatttccccggattaaagttgtgtctacactaacacgcgggaact
AGCTAGAAAAGGAGAGAAAAAActggggtcaaattaaatttttctccctt
cttgcggcatgTAAAGATAATAGACTTACTTTAAGAGCCCATTTATTTAA
GAGGGGTGtcatatcataaataaattatgtaagtaagtgatattttaagt
aataagttcattaacaattttattttgaagtttgtttttaaaaacaaaac
cNTAAAACccccgggggggtacttagggttggtgaatgaggggtatgtgc
ggacgggacctccgaaaaccgacccttagagagaccaaattttagtgaaa
aagtgaccctttagagagactttttcgaaaaattttctctgattttcaaa
aattcctacCCTTagccttagtgagacttttttgtaattttttctctcaa
aatcaaattctttttctaaaaatctggatttttcccacccttagagggac
tactttgaaatttcctgatttttgtaacccttagagagactttgaaaggt
gaaaaacccgacccttacNACttaagtcgtaactccttgccagtgacctc
ccagagaaatttttagacggcagacactgactttaggttggtttggaaat
cgttttactttgaaatgtaatcttcactttagatgaatacttttatttat
ttggattcatgaaagattcaaggtttgtttactttttatttcaaattatt
tcattgatttattgagctgcaatagctgatttaaaaacgaagatttttga
tagttatcagcgtgagcttggccgccattttgaatttcaattttttttct
cctgtactcggcaatttagaggttgttcgtatacgcgatttggcttacgc
gtaacacttgtgtcaatcaaacaacttccaataaaaattgcaatcgaacc
aatcaaacttgGTTgaataatacacctttcccgtaattcacacttctcag
aaatggctcgggaaaatgtgcgctccaccgttgtgtataaattgtttggg
aggtaaaaaacaAATGCCTTTTTGCTGCCTGTGAAGGGTTAGAGAAAGTG
GGTTTttcagcttataacttttgatagcgacCTTCTTTCTTGGGCCaaaa
attttcagggtggtataatatcatgaaaagtttgaatatactaaaatttg
aggggattttttgatggacagaacttaagaaaagctcaaaaaaccaattT
TCTCCAAGGAAACACAGGCAAAAACAGGTTTGTTTACCTCAAGAGACCAA
ACAACAGTGGAGAGTATCAAAATGGTGCACGCGCATTAGTTTTGCAAATT
GTGGGAAAAGTgtattgcgattcgattgttgaacgtaatcgaatctcaat
cgaacggccgattggATTCCTGGGTAAAATTCAATTGCGTTTGAGTAAGG
TTTTAGATTGGCTCAATTGATAGTTgtctatgttcgattggttcgattga
ttgtcaattataTTCGATTGATCTTCAATTTCGTTCAATTGCAATGTGAT
TAAATaaaattggatcactccgttAGAGCATTTAAGCGTGGGCGGCTAAt
tgaattgcaattatttgattgtgttcaattgccttcaattgattcggcgt
tcaatttattcgattgacaccgtttgaaataaaaacaaaaacgacACATT
GATATTAATGCATTAATCAACCGttcgagtactttgattgttaatttcgc
ttagcgaaagtattacaatagcctttcgcggcggtgtcatcggaaaaaaa
attagaaaacgaaagtgcttgatacggtggacgaactcactaaatttaat
ttacaaattacacgctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNattattcttataagcatttactttataagaatcaaatc
aataactcttgatagaaggtaatatacctttcggtaattagctcttacaa
aataaacaagagatgacgcacaatatgagcatattcatttttcttatata
agcatttgctttataagaatccaataaataacttttgatagacggtgata
ttacctttgtttattagttcttaaaaattaaacaacagttgttcttaaat
tggtctctttttttagcgattttaagNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCG
ataacttcgataaccaattactaTCTATAtattaagaaaaaccaaaaaca
ttgacctaaatgctaaaaccaaagcacaaaaagatATTTCCCTGCAATTT
TGTGTGCTTTCGCCCGGGACGGTATAAAGCTGATacgtctccaaaatcac
cgtccgcTTTGCTGGATGACGGTAAAACCACCAAAATACTGTcatctgtt
taggtgagcaaaggcgatatagagccgtacatcaactatcgactttgttt
tgtatcatttcacttaccgtaGCCCTCGATATCTTCTGATACGTAAACTC
GGTAATAATAGGAACgttggaatcgctgattgaaactaacTTTCTTTGCT
TAGTTATTAGTTGAGGAGTCCATCAGTGTTTCTGACCTTCCTATCtatcc
tattattcctatctttaaagaaggatgtcgaaattagaagagcgatgttg
acattagaccaactgacagtactagacaaagttgccacatcGTTGACCGT
TTCTGCCACAATGTTGTAGAAAGCATACTAGAAGGGAAGGATCTAGAATT
GGATCACCAatccaaccctgtggctctcGCACAATTTTACAGCTCAAAGA
AGAAAATGGAAAGAATGGaaaaaagaatgagaatttaaaaaaatcagacT
AATTATTCATCTTACGCGGCAATATCATTGGTCGaaatacaaaaaagatt
ttctgatgGGGAAACTGTACTTACGAAAGACCCGTCtgagtagaagagac
cacttttgtctttattgcagatttcgatataaacaTTGCATGGCGGAATA
TTTCTTTCAATGTGTATTATGTATCAACAATGTATGCTTTAAGCATTGTA
TCAGTTAGAGAAACCATTTTTGATACTGTCATTCTATCAGCCAGTAAACT
TAtatttcttactattttccatcgaaaacaacctaAAACATcactacttc
ccaaagccggagtccaaaacaaattatcttccatgATATGGGcacccttt
tggatctattgtaaGATAAAGGCGGTGGTGGTAGCGTCAAAACACCCAAT
ATATGATCATTCAACAGAAGACGAGTTAGTTGAGTTAGTTGCTGCAGGAA
TAACTTGTTTCACTCCACTGTAGCAAAAACGCAAATGGCATTTCATGTTT
ATAAGAATAATGGTTTGGGAGAACCCGACGATCTATTATTATGTTACAAA
TCATTCCAGCCAGTAAAATTGTATAATTATCTTGTACCTAGGTAATAGCT
GTTTAGTAATAGAAAATCGATTATAATGACGTTAtcattcaaaaagtttt
cgggaaacactgcatttttttattttcgcctaacgACTACAgtatatctt
atgtgcttaattctatttgactttgaatgcttcattgaagatgaagaagg
agAAAGATAACAAAATGTGCTGGTTATTTTGTTTTAATAGGTTTGTTCTA
Tcattgtttctatttctatttctattctttaccgtcaactgctctaactt
gggaccattggtcgaaacatggttgatatctggtctgtattttcacttac
tgttaaatctctttgacaacaaatttgttttgataactccaagtttatca
atcaatcatacttcttcgttcctcttagaTTGCACAGACACTTGTGTGCt
tcactacggatttttttcatatttcgatttaaaagcctactactcggtgc
aaaagagaaatcgtgtattttttaatacgctgttcattaactcaaatcaa
atgactttggaagcTCGGTGagatggtggctgaattgccgtcccatgttt
tgtcagattttGTCTCAAGTTAGAGCAGTAAGTTGACGGTAATTAGCATA
AACTTATTATAAAGTTATTCTCGCAAATGTAacataaataataaaatgaa
aacattaaaagtGCTCTAGCttcataataaataataaataataaaaattg
tTTGCTTTATCGTTTATGcaaaaaaatggttaaaaaaagacaaaagtaat
ttttttatgagtacggttatgattttttttattgcagCCAGGTACAGGAA
CTCACCCAATGTTCCTAATTGTAATTGTGTATTGTTGGAATAGGAAAGAG
AGAGGTAAGTCTAAGCTATCCTAATTGTCAGTTGTCAGGAGGTGTTAAGA
GAACATGAGAGAATATGAGAGCTTATATATGTATCAGAAACGAAGCACAC
AGTTTTCCCAAGCCGATTGGATTAGGGTTATTTCCTTCATCATGTAGTCT
ACTATACAGTAACCATCAATTGGGGTTACTTTCAAAAGTAAGGGATAACT
TTCATCACTTGCAAACCACAACATTTTCTGGTCCTCAGTTTATGAAATTC
AAAAGTCATGACATAACTTATTTAAATCGTAAACAAGAACAGTCTGCTGT
TTGGAAGTGATGAAACCTTACCCCAGGCTTATGAAAGTaagtgaaggaaa
aatttaaAGTTCAATATAGTATATTAATCACCtgacattttcttgaaaaa
tgaactCTCCTATGTTTTCTTCTTCGTCATGTTTTCATGTATAGATCTTT
ATTAGCAAGTGGAGGATTACCCTATTGATTTAGGAAGACTAGGCAGTAAA
CCAGagcataaaatattaaaaactgaaCTGTTGAATTGTGTTTTGGGGGT
TTTGGGCGCTTAGGCTTAGCCTGAACTTTAGACAACAGACAAAATCCAAA
ATCAGCCATTTCGCAGGAAAGCAAAACTAATTATTAATGGTTGCCtttgt
tttgattaaatttCTCTGTTCTGCATTTTATAAATTGatttagaaattag
atttaaAATTTGCAATGAAATGCTTCAGATTGGAAAACCCCACCTTGTCA
CTAGAGGTCAATAATTTCTCTGAAAACTTGAGCTCTGGAACCCAAGGTGG
AAGGTCTTGAGGCCTCCCACTGCAATGTACTTGACGCGGTTTTACAAAAT
TCCTTAAGCCTTATAGATGTTGAAGACTTTCCctaccttcagagctttag
catgTCAGACTATGtcagaagaaaatttctacattgaGTGACAGATAAAT
GAAGAATCGAAAAATTCCCCTCTGAATTTTGTCCCCTAGGAATcagtatc
attttttaaatttttaagtcTATATATTATTTACCCTGgtaccatgaagg
taataaagataaagatggagagaaaacgtcacgataatgatctaaatggt
cgttgaaatcttttataaatttattcaaagcggcttttctttgatgtacc
atcattggaagcaaaaaacatcaatttataactttataagaacagaaaga
gactgtttgattgattttgaaaaacttaattttgccgagaatccttgtta
aaatgcaattcgaaatagtttcaactgatgtaagactaaaagagtatatt
aatttcataaggacacatttttgggctggcattttgttaacattgagaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNatcgatggctttatgggcagcttcccctagaagtttggagtatt
gtgcttattatgtgaagtttttttcaatttttcatgacaaggctattata
tttcaatatactggttaaaaatgtaattcattcatcttaaatattcccac
gagtatacccaaaattaatcatcttattcccaaagcaaccaaacagctgt
ttgcttccgatgataaatcagaatagaacaaaaggcattgactctccacc
TATCTTTACTACCTCCATGCTGGTACCAAGGCCCATTTATGCAAAACTCC
ATGTTGAGAGGACAACAACTGTTGTTGTTTCATGGCTGTAAAGTAACCCC
AAGGAAATTGGTTTGCTCAACCCTAGGATGAAGTAAATAAAGTAGTTATG
CTATaaatattttagaataaaaTGGAATGGATGAACACAGTTGTTTCACT
TGTACACAATGATGAAAATAGATCTGAAAATGACGTGGAAGAAGTCATCC
AGGAAGCTGAAGAAATACTTCGATGTTGCATTTTTAAACTATTAGAAAAA
GTAATTCACCAAGAAGTTGATAATGGacagtttgatttttcttcgtTACC
AGAACATATCACTAAAGAGCTTAAAGCCATCAGAGAGTATTTGATTAAAT
GTAAAAACTCTGATGACAGTAGTTATGTACACCATCAAATTATTGCAGTT
ATGGACTCACAACTTGATTGTACTTTGAAAAGACATCATCAGACATTTCA
TAAACTAACAGCTTCCTTGGACCTATCAAGTgagtttaattttgcatatG
AATCTTTTGTCAGAATTGCCAAGAGATTTATTGATGGTGAAATTACTTGG
TTTCGTGTTGTTTCTTTACTTTGTTTTGGTGCAGAATTGTCAGTAGCTGT
TATAAAGAAAGGTGGACCTGGTGTTCAAGGTTTCATCAAACGTATAGTGC
ATTATGTTACAGAGTTTCTATTGAAAGAAGAAGTTGCCGATTGGATATCA
ACTCATGGAGGATGGGTAGGTTTTGATAAACACTATCTAATGATCTCAGG
AAGCATATTTGTGAATGACAAATAACAActttaaaatactaaaaataatC
ATAGTTCAATAAATTTTATGCCCATTTATAAAAACAGCTGTCATTCTTTA
TATTTGAGACAGCTCAGTTTTTTCATACCTTAttggaaactaattttcgc
gggaactcaTTTTCACGGTCGAAAACAAATAtcctaaaaattgcatttcg
cgggttttaattttcacgtttttttcattctggaatttttgcgggtttta
atttttgcggctttgtccttttttggacaaatttctttcattttcctagg
gatttttcaaattttcgataaaattggaaacaaTTGTGaattaattcccg
caaaatttagttccaTTAAGGTATACAAAATGAAGTACGCAGGGAGAAGC
CCTGTTAAAATTTCTTTATCCTGAGAATTTCCTACTTCAAAATTAGACGA
ATCAAAAGTGTATTCTTAATGCTTTTCTCCtcatttatttcaatttcatt
tttttagctGATGATGGTAAATTTCTTTGATTCTGTGGACTGTCCACATC
GTCACGATCatttgtttgatttgattttcatcacTGAAACTACCTCTTTC
GAAAAATGGGTAAAGAGGATTGCTTTTGGAACCGTCCTTCTAGGTATAGG
ATATACCATCAGTAAAAGATTGTCATGATTTAACTTATCATAATTTTGGA
AAGGATCTTGAAATCAAACCCTGTTCTACTTATAATAGGAAACTTAACGT
CATTTTGCACGAGCTCTGTTTTGTAGattattttgatatattttacaTTT
AGTTCTTTTTACATTACcactacactctttttttatattatttattgcaT
CTTTACGTATACatcttgttattgtttttaaataattgAATTAGCctttt
aaaataaaacgaacacttagaaattagatgaattttttgcatcaagaaaa
tatattacaattttaggTAGACGCAAATGCAAGCAAACATCTTCTGATGA
Tgacttatttttcttttagctttttaattttgttcttttttgtgaaattt
gttttttatttttttaccagTAGTGAAGTGGCTTGATCAAAACTTGGGAG
GCAATTTAAAAATTAGTAATCTTGTACCCCTTTAAATGGAAAAGTGTTAA
AATAAGAGTTAGTATGCAATATGATATATGAACATAAGAATGGaatattt
gccaaaattaatgaTCTAATGATTTTTTAAGGCCCCTTATCATTTTATCA
ACCTCTGAAAAAGGCTGTTTTGATATGACAATTACCATAATCATCATTAA
ATTCCATACATGGATATTCTTCTTGCTTCAAATTATTTATAAACACTTTA
AAAGCGTTCAAGGAACAATAGGCttcttaaactttttttatcGTCTTTGT
ATTATATTGTTATTatgtattttataaaatatatacCATCTTGCAGAGTC
TTCTTTTTTCTGCCTCATCTTGTAGCTTACCACCAGATTGACCTcggttt
tttattttctgttggACGCTTACTTTTTGAGTTTACTATCATCCAGcaat
aattcttttttgattttagcaaaagaaaaaaaaaggaaatacttGTAAAA
AAGCAACATGGCAGCTGCTGCACCAGATCCCAATGATGATCCCaacgaat
ttttcaaaagacgTCCACCATACGATAAAGATGTCTCTTTTGACCAGACC
AATCTTGAAGAGGATGAAAAGCAAGTCGCTGaagaatcagagaaaatttt
caaaacatttttatatactCGATTATTAAGTGATATTGAGCGTGACTCTG
AGGACGGTGAAATGTGTGTTGGGGAGATCACCACTCCCGTCATTCATCAG
ATTCGTGATGAGAAAACTAATATGGAGGAGCAATTTAATCAAGATGaaca
agataaaaaaattcttgaactGGGACAAATGTTGGCTGCCGTTGGTGATA
ACTATAATAAAAAATACGATTTTCAATCCATAGTTGGTAACTTGAATATA
GAACATGAAGAATTTGCTTATACTAGTTTTACAAACGTTGCTCGAAAATT
GGTTGTAGGTGGTCTCAACTGGGGTCGTATTCtggctttgtttttatttg
gttATGAAATCGCCCTTAGTTTTCTTCGAAAAGGTCACTCAGGTGTTTAT
GGTTTGTTAAAGAGAATTTTGAAATACATGGTTAAATTCTTGTTCAAAGA
AGGAATTGTGAATTGGATCATTGAACAAGGAGGATGggtatgttttttta
ttcagttcgATCAAACAAAAGGCTAAACTTAGTTTAGCAATTGTATggtt
attttgttttaaaagacCTTTGTGAGCATTCTTTTATAAGTATTGGAGAT
ACCTCGAAAAGGTCAAAGACTTTGAATCTAAAGTCACCTCCGAGCtcttt
caaaatgttcaaactGTCTTCAGGTATGATGAGAATTTTTTCGCCTGGAA
TCTTCTTTGAAGTTAGCGTTTACATTCATGAGGATGTTTACTTATCTAGT
GGTTTgtactattcatgatatgcacgtcattgcaatgtcttctgacatta
catcacggaaccaacagctgattggttgcaagtgacgtaaaaccagtcaa
tacgtcactttcaaccaatcagctgttgggtccttgGAAGagattgcaat
ggtgcatattgtAGATAAGACATATTTTTATTGTCATATCGAGCAAACGA
TTTGTTTCGACAACTGCAATATTTGTAGTCCATCATTCTTTACACAAGCA
TACAACTTTAGTTTCAAGTATTTCTTTGAAATGTTTATGTTTTATTTGAC
ATTGCACAATTAGTTTTTACTGAAGTTTTTTCCTTTATTATTTAGATAAA
ATTCAAGTTGCAAGAAAATCGAGAGTCGGTCAACTATGCTCTTATGATCC
TTGCCTCTCTGTTAGCTGGATATGGTGCTTACAGACTTTATAATCGATGA
AAACTGGAAAATGTCTATTATGTGTGTGTATGTCTTATATGACATCTCTT
TGTTTTCCTGTCCAACAACATGTTTGAATGGAAAGACATTTAGGCTGGAT
CCCGAAGTGATCCCTGTTCGCTCACTCCATCTGTGAAATGATGATGGATC
TTGAAATAGCCCaaagcattttttaaacaaattttttttaaagtcttttt
gtccattttgcatttttaataaaatgaatGCAAAACGTAAGATTGTGGAC
CACGTGTTttgtttctcttctttcttatatttgcatttttctttaaattt
cttttaaggTTTCAGTGAATGTTGTTTTCGAGTCGGCGATgcaaatcctt
aaaatgttcttaacttgttcttaatattttagccatcgaagccttatgtt
ctatatagtttgttcttataaaagacgggtatttaattttcaaataaagt
acATGAAATCTGGTGTCTTTTGCTCTTTCGactattttttttgtcttttt
tgattCGTAATTGATAGTCGATCTATCAATTGCGATTTTTTGTTCACCAA
TTTCATAAAAGATTTTGCATGTTATTGAAAAACTTGCTTCTGAAGATACC
ATACGGTCTCTTTGTTTTGCATTTGACGTCGTAAATTATACATAGTATTT
AAAATAAGATGATGAAATTATGCTATTTTCTTATATCTTTTGTTGTGTTT
TAGATATTATATCCATTAGGTCccattttttattaaaagatgGGTCAATT
TTTAGAAATGCAGGACGTCTAAAGAATGAATATTTTGAATTCAGACGGAC
TGCAAAATTGATGTTAGGAATTGCATGTTTGAATTGGTATTGTTTCTGAA
CACTTTCCCAGCAAATTCACTTTTATAATTAGGGACGAATTGAATCAGTA
GAATAATTTGATCAACACTTCGATACTTTAACGCCTTTATTACCATGCTT
CGAATTGTCGAGAAGGATGAACAAGACAACAGAACTCTTTTAGtaattta
tatattatattatgaTAAAAATTAATGTATTGTCGTCAAATATGaaatat
ttatgatttttttgacatGAAGAATAGATTtaatattgccattttaaaa Coding sequence (CDS) from alignment at sc0000162:62758..83256+ >TCONS_00013070 ID=TCONS_00013070|Name=TCONS_00013070|organism=Clytia hemisphaerica|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000162:62758..83256+ (Clytia hemisphaerica) ACCCTAAAAGGCAAAGACATAGCACTTGATATCATGGAGagagaaaataa aaTGGAATGGATGAACACAGTTGTTTCACTTGTACACAATGATGAAAATA GATCTGAAAATGACGTGGAAGAAGTCATCCAGGAAGCTGAAGAAATACTT CGATGTTGCATTTTTAAACTATTAGAAAAAGTAATTCACCAAGAAGTTGA TAATGGacagtttgatttttcttcgtTACCAGAACATATCACTAAAGAGC TTAAAGCCATCAGAGAGTATTTGATTAAATGTAAAAACTCTGATGACAGT AGTTATGTACACCATCAAATTATTGCAGTTATGGACTCACAACTTGATTG TACTTTGAAAAGACATCATCAGACATTTCATAAACTAACAGCTTCCTTGG ACCTATCAAGTgagtttaattttgcatatGAATCTTTTGTCAGAATTGCC AAGAGATTTATTGATGGTGAAATTACTTGGTTTCGTGTTGTTTCTTTACT TTGTTTTGGTGCAGAATTGTCAGTAGCTGTTATAAAGAAAGGTGGACCTG GTGTTCAAGGTTTCATCAAACGTATAGTGCATTATGTTACAGAGTTTCTA TTGAAAGAAGAAGTTGCCGATTGGATATCAACTCATGGAGGATGGctGAT GATGGTAAATTTCTTTGATTCTGTGGACTGTCCACATCGTCACGATCatt tgtttgatttgattttcatcacTGAAACTACCTCTTTCGAAAAATGGGTA AAGAGGATTGCTTTTGGAACCGTCCTTCTAGGTATAGGATATACCATCAG TAAAAGATTGTCATGAACCCTAAAAGGCAAAGACATAGCACTTGATATCA TGGAGagagaaaataaaaTGGAATGGATGAACACAGTTGTTTCACTTGTA CACAATGATGAAAATAGATCTGAAAATGACGTGGAAGAAGTCATCCAGGA AGCTGAAGAAATACTTCGATGTTGCATTTTTAAACTATTAGAAAAAGTAA TTCACCAAGAAGTTGATAATGGacagtttgatttttcttcgtTACCAGAA CATATCACTAAAGAGCTTAAAGCCATCAGAGAGTATTTGATTAAATGTAA AAACTCTGATGACAGTAGTTATGTACACCATCAAATTATTGCAGTTATGG ACTCACAACTTGATTGTACTTTGAAAAGACATCATCAGACATTTCATAAA CTAACAGCTTCCTTGGACCTATCAAGTgagtttaattttgcatatGAATC TTTTGTCAGAATTGCCAAGAGATTTATTGATGGTGAAATTACTTGGTTTC GTGTTGTTTCTTTACTTTGTTTTGGTGCAGAATTGTCAGTAGCTGTTATA AAGAAAGGTGGACCTGGTGTTCAAGGTTTCATCAAACGTATAGTGCATTA TGTTACAGAGTTTCTATTGAAAGAAGAAGTTGCCGATTGGATATCAACTC ATGGAGGATGGctGATGATGGTAAATTTCTTTGATTCTGTGGACTGTCCA CATCGTCACGATCatttgtttgatttgattttcatcacTGAAACTACCTC TTTCGAAAAATGGGTAAAGAGGATTGCTTTTGGAACCGTCCTTCTAGGTA TAGGATATACCATCAGTAAAAGATTGTCATGAACCCTAAAAGGCAAAGAC ATAGCACTTGATATCATGGAGagagaaaataaaaTGGAATGGATGAACAC AGTTGTTTCACTTGTACACAATGATGAAAATAGATCTGAAAATGACGTGG AAGAAGTCATCCAGGAAGCTGAAGAAATACTTCGATGTTGCATTTTTAAA CTATTAGAAAAAGTAATTCACCAAGAAGTTGATAATGGacagtttgattt ttcttcgtTACCAGAACATATCACTAAAGAGCTTAAAGCCATCAGAGAGT ATTTGATTAAATGTAAAAACTCTGATGACAGTAGTTATGTACACCATCAA ATTATTGCAGTTATGGACTCACAACTTGATTGTACTTTGAAAAGACATCA TCAGACATTTCATAAACTAACAGCTTCCTTGGACCTATCAAGTgagttta attttgcatatGAATCTTTTGTCAGAATTGCCAAGAGATTTATTGATGGT GAAATTACTTGGTTTCGTGTTGTTTCTTTACTTTGTTTTGGTGCAGAATT GTCAGTAGCTGTTATAAAGAAAGGTGGACCTGGTGTTCAAGGTTTCATCA AACGTATAGTGCATTATGTTACAGAGTTTCTATTGAAAGAAGAAGTTGCC GATTGGATATCAACTCATGGAGGATGGctGATGATGGTAAATTTCTTTGA TTCTGTGGACTGTCCACATCGTCACGATCatttgtttgatttgattttca tcacTGAAACTACCTCTTTCGAAAAATGGGTAAAGAGGATTGCTTTTGGA ACCGTCCTTCTAGGTATAGGATATACCATCAGTAAAAGATTGTCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00013070-exon-sc0000162-1491911889:62758..62804 | TCONS_00013070-exon-sc0000162-1491911889:62758..62804 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1510915933:62758..62804 | TCONS_00013070-exon-sc0000162-1510915933:62758..62804 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1575043694:62758..62804 | TCONS_00013070-exon-sc0000162-1575043694:62758..62804 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1491911889:78573..79172 | TCONS_00013070-exon-sc0000162-1491911889:78573..79172 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1510915933:78573..79172 | TCONS_00013070-exon-sc0000162-1510915933:78573..79172 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1575043694:78573..79172 | TCONS_00013070-exon-sc0000162-1575043694:78573..79172 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1491911889:79715..81444 | TCONS_00013070-exon-sc0000162-1491911889:79715..81444 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1510915933:79715..81444 | TCONS_00013070-exon-sc0000162-1510915933:79715..81444 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1575043694:79715..81444 | TCONS_00013070-exon-sc0000162-1575043694:79715..81444 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1491911889:82053..83256 | TCONS_00013070-exon-sc0000162-1491911889:82053..83256 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1510915933:82053..83256 | TCONS_00013070-exon-sc0000162-1510915933:82053..83256 | Clytia hemisphaerica | exon |
TCONS_00013070-exon-sc0000162-1575043694:82053..83256 | TCONS_00013070-exon-sc0000162-1575043694:82053..83256 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000162 | supercontig | sc0000162:62758..83256 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
Term | Definition |
GO:0042981 | regulation of apoptotic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0042981 |
regulation of apoptotic process |
Blast
BLAST of TCONS_00013070 vs. Swiss-Prot (Human)
Match: BAK (Bcl-2 homologous antagonist/killer OS=Homo sapiens GN=BAK1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.619e-21 Identity = 54/182 (29.67%), Postives = 98/182 (53.85%), Query Frame = 2
Query: 1853 DEKQVAEESEKIFKTFLYTRLLSDIERD----SEDGEMCVGEITTPVIHQIRDEKTNMEEQFNQDEQDKKILELGQMLAAVGDNYNKKYD--FQSIVGNLNIEHEEFAYTSFTNVARKLVVGGLNWGRILALFLFGYEIALSFLRKGHSGVYGLLKRILKYMVKFLFKEGIVNWIIEQGGWI 2380
E+QVA+++E++F+++++ R + E + D EM +T P+ + + ++G+ LA +GD+ N++YD FQ+++ +L E AY FT +A L G+NWGR++AL FGY +AL + G+ G L ++ +++V F+ I WI ++GGW+
Sbjct: 23 SEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM----VTLPL------------------QPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN-AYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQH---GLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWV 178
The following BLAST results are available for this feature:
|