TCONS_00012841 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012841
Unique NameTCONS_00012841
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2285

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012841 ID=TCONS_00012841|Name=TCONS_00012841|organism=Clytia hemisphaerica|type=transcript|length=2285bp
ATAGGATTGTCAAATATTTTTAGTTCCTCAATTTTTACTTTCTAAAATCA
ATTAAGCTAAAAAACAATAATTTATGCCTTTAAAACACCATATTATCAAG
TTGTTCAAagatttttgctattttttgagcTGGAAAGATGAATATACTAC
ATTTTTGCTGCCTTTTGCAAATACTTTGAAAGACTCGAAAGAAGATCACT
CATCAGATTCATctattataacttcatcttgttATATATCGTACagtaaa
agataaaaaacaaccGGATATGTCAGGGCAAGAACAAGAAACAGACAGAA
ATGTTGAGATTTGGAAAATTAAGAAACTTATTAAAAGTCTTCAAGCAGCT
AGAGGCAATGGCACTAGCATGATTTCCCTCATCATTCCACCAAAAGATCA
AATTTCTCGAATCGCCAAAATGTTGGCTGATGAATTTGGTACAGCATCAA
ATATTAAAAGCAGAGTCAACAGaTTATCTGTCCTTGGAGCTATCACATCA
GTACAACAACGTCTAAAATTATATAATAAAGTACCTCCAAACGGTTTGGT
TGTTTATTGTGGTACTATTGTGACgtcagaaggaaaagaaaagaaagtta
atATTGATTTCGAGCCTTTCAAACCAATCAATACATCTTTATACTTATGT
GACAATAAATTTCATACAGAGGCTTTAACTGCGCTCCTGGAGGATGACAG
CAAGTTTGGATTCATTATAATGGACGGTAACGGCGCATTATTTGGAACAC
TTTGCGGAAATACAAGAGATGTCTTACATAAATTCACTGTTGATTTACCA
AAGAAGCATGGTCGTGGTGGTCAATCTGCTTTACGTTTTGCACGTTTACG
TATGGAGAAACGTCACAATTACGTCAGAAAAGTGGCTGAGACGGCTGTAC
AGATGTTCATTTCCAACGATAAAATCAATGTGGCTGGTCTTGTTATTGCT
GGTTCTGCAGATTTCAAATCAGAGTTGAGTCAGTCTGATATGTTTGATGG
TCGGTTACAagcaaaaatattgaaagttgTTGATGTTTCATATGGTGGTG
AAAATGGTTTCAACCAGgCAATCGAATTATCAGCCGAAGTTCTTTCAAAC
GTCAAGTTCATTCAAGAGAAGAAATTGATAGgaaaatattttgacgAAAT
CTCACAAGATACAGGTCGCTTTTGTTTCGGCGTCGACGACACATTGAAGG
CTTTGGAAATGGGAGCTGTTGAAACACTCATTGTTTGGGAAAatcttgaa
acacaacgtataACCTTGAAAAATCACAGTTCGGACGatAATAACATTTT
GCTACTGAATCCTGAACAAGAAAAAGATAGAACAAACTTCCTGGATAAGG
AAACTAACGTTGAGTTGGAAATATTGGACAAAATGCCGCTCTTGGAATGG
CTTGCTAATAATTACAAATCCTTCGGTGCTGCATTGGAAATCGTTACAGA
TCGTTCACAAGAAGGCTCGCAATTTTGTCGTGGTTTCGGTGGTATTGGAG
GTTTACTGCGGTACAAAGTGGACTTTCAATCGATGGACTACGATGATTTG
GATGACCTTGACTATTACGATGATGACGATGAATCTCTCTTCTAAatagt
gaacaaaaaatgaaagattttatcaaatcatCCCATCATCGGTATAAATA
CACAGAAAGTGCAATACAGTGAAGTTTCATTACGAAACGCCATTGAACTG
TTGATACCGAAGAGCAACTGAATGGTTCCATCCTATGGCTGGTGGCACGA
AAAACAGTTCGCTTTTAATGATTTTGACGTTAAAGATGGGGGTGTCTCCT
CTATAAGTGAAACAAACGACGACCTAATGACGTTTCAGCAATAACTGTAG
AAGACAAGAAAGAAGCCTTTGAATAGGCTCATCAGAAACGAGGgcgatat
tttatttttgaaaatcgagattttattttatttggtttttattgTAGTTC
TccattgttgttttttcttatttgttcGCCATTCTCCAAAAAGACTTTTA
TCGTGAAAAGTCCAAGACAAGGTTTTTACAAATTCGCCGACGTAGATTCC
AATGAAAACCAGAATGTTATCTCTCATTTAGCATGACCttaaatagtaaa
gtaaattttgtgttttattACTGGGCATTTGTATTTTTGTGTATTTATTC
AGATAATTTCAGAATAACAGAATTGTGTCAATCGTTCATATTTGTCTGAC
TTCCAATTTAAGAGTTGCCTAACGACTACCCAACGAGGGTTGTTCCAGaa
gcttttttttatatatattctAAAAAACATCGAAG
Run BLAST on NCBI

transcript from alignment at sc0000156:338684..353042-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012841 ID=TCONS_00012841|Name=TCONS_00012841|organism=Clytia hemisphaerica|type=transcript|length=14359bp|location=Sequence derived from alignment at sc0000156:338684..353042- (Clytia hemisphaerica)
ATAGGATTGTCAAATATTTTTAGTTCCTCAATTTTTACTTTCTAAAATCA
ATTAAGCTAAAAAACAATAATTTATGCCTTTAAAACACCATATTATCAAG
TTGTTCAAAGATTTTTGCTATTTTTTGAGCTGGAAAGATGAATATACTAC
ATTTTTGCTGCCTTTTGCAAATACTTTGAAAGACTCGAAAGAAGATCACT
CATCAGATTCATCTATTATAACTTCATCTTGTTATATATCGTACAGTAAA
AGATAAAAAACAACCGGATATGTCAGGGCAAGAACAAGAAACAGACAGAA
ATGTTGAGATTTGGAAAATTAAGAAACTTATTAAAAGTCTTCAAGCAGCT
AGAGGGTAAGTGTTTTATAACTGAATTCTAAAAATGAAAAATTCCCACTT
ACCTTCACAGCCAAATTAATTAATAGAGTAAGTAGAATGAAGCAAGTTCA
TTTATAAGCGATGGGTATATCAAGTTAATTAATTCCCTTACTTTTTAGCA
ATGGCACTAGCATGATTTCCCTCATCATTCCACCAAAAGATCAAATTTCT
CGAATCGCCAAAATGTTGGCTGATGAATTTGGTACAGCATCAAATATTAA
AAGCAGAGTCAACAGGTATCTTTTTAATACTAACTATAACAGCTTGATCT
ACTATGATTAGGCCTTTTTGTAAAGATATGCAAAATTTAATGGATTTTAA
TCAGTTTTGCTTAAGCTAGAAGTACATATTTCTAGGTTACTCGTACCTTT
TTTATTGACAAAGGGTTTAGTTTAATATTATGTGAAAAGACTTCTTTCTC
AGATTTATGTGAAAGGGGAAGTCCATTTCAAGTTTTATGAATGCTAAGAT
GACATATAGCACCTAAATCAAGCTAAATCATTTATCAGATGTCTGAATTA
TTGTTGGGAGCAGTTGCGAGTATTATTATGGCACATTTAAATTTTCTGAT
CACAACCGGGTCCTTCAAGGCAGAATTCTTAATAAGGATTTAACTTTATC
AGCACTCAATATTAATTTGTATTTGTATTTGTGACTCAAAATCGAAGGCC
AGATGTGGTTTGTTTGGCTGTTTTTTATTGCCTGATAAATTTTCAACTTT
TCACTAATTTGGGCTAAAGTCTGTCCCAAAAGTATGTGGAAACTCTACCC
TTTTGACCAAATCTCAGCATGTATAAATGCGTTATATTGAAAGGCTATAC
ACCATTGGAAATTTGGAAATTTATAAGAACCACATCTACCAAAATTTTGT
GCTGAGAAATTGTTTAAAATGTATAAAAGTGTCCGCATAGAGACAGACTT
TAGTAATACAAGGTACCGGCTGACTTTTGGATGAAAAAAATCTTATTTTA
GATTCATGTATAAATATTTATTATTGAACATACTTGCTTCACTGTTCCTG
TTTGCTTAAAATTTGATTTTTTGTTTAGATTATCTGTCCTTGGAGCTATC
ACATCAGTACAACAACGTCTAAAATTATATAATAAAGGTAAAGCTCCACT
TATGTATTTGAACGATAATAATGTTATAGCATTGCTTGCAACATATTAAC
GCTCCTTACTTTTGAAAAATAAGAAAAATGTATCCCTTTTTTGACAAGCA
TGGTTTTTGCATTATATTGGTTAAATTTTGTTAAATTGGTTACTGTAATT
TTAATTTCGGCAACATATGAAAGCCTGAAACACAGTTCCCAAGTTAAAGA
AAGAAAATGTCATCGTAACAAAATAATGTATTTTTATCTGATTTTCTTTG
GGGCTGCATTGGCAATATCCACTGTTTCAATGTGTGAATATCTCTTTTGT
TGTCAATTTCAGTACCTCCAAACGGTTTGGTTGTTTATTGTGGTACTATT
GTGACGTCAGAAGGAAAAGAAAAGAAAGTTAATATTGATTTCGAGCCTTT
CAAACCAATCAATACATCTTTATACTTATGTGACAATAAATTTCATACAG
AGGTAAGAGCATGCATACTTCTGACTGGAACAACATTGCAACTACCCNAG
TATTTGTATTTGTGACTCAAAATCGAAGGCCAGATGTGGTTTGTTTGGTT
GTTTTTTATTGGCTGATAAATTTTCAACTTTTCACTAATTTGTGCTAAAG
TCTGTCCCAAAAGTATGTGGAAACTCTACCCTTTTGACCAAATCTCAGCA
TGTATAAATGCGTTATATTGAAAAGCTATACACCATTGGAAATTTGGAAA
TTTATAAAAACCACATCTACCAAAATTTTGTGCTGAGAAATTGTTTAAAA
TGTAAAGTGTCCGCATAGAGACAGACTTTAGTAATACAAGGTACCGGCTG
ACTTTTGGATGAAAAAAATCTTATTTTAGATTCATGTATAAATATTTATT
ATTGAACATACTTGCTTCACTGTTCCTGTTTGCTTAAAATTTGATTTTTT
GTTTAGATTATCTGTCCTTGGAGCTATCACATCAGTACAACAACGTCTAA
AATTATATAATAAAGGTAAAGCTCCACTTATGTATTTGAACGATAATAAT
GTTATAGCATTGCTTGCAACATATTAACGCTCCTTACTTTTGAAAAATAA
GAAAAATGTATCCCTTTTTTGACAAGCATGGTTTTTGCATTATATTGGTT
AAATTTTGTTAAATTGGTTACTGTAATTTTAATTTCGGCAACATATGAAA
GCCTGAAACACAGTTCCCAAGTTAAAGAAAGAAAATGTCATCGTAACAAA
ATAATGTATTTTTATCTGATTTTCTTTGGGGCTGCATTGGCAATATCCAC
TGTTTCAATGTGTGAATATCTCTTTTGTTGTCAATTTCAGTACCTCCAAA
CGGTTTGGTTGTTTATTGTGGTACTATTGTGACGTCAGAAGGAAAAGAAA
AGAAAGTTAATATTGATTTCGAGCCTTTCAAACCAATCAATACATCTTTA
TACTTATGTGACAATAAATTTCATACAGAGGTAAGAGCATGCATACTTCT
GACTGGAACAACATTGCAACTACCCCAGAGTTGGGGCACCTACCTGCACC
TGCAGTAATAAAAATAAATAAAAAAAGCAACTCACTTTTTGTAAGGGTCT
GAACAAACACCATGGAAATTCTTTTAAAGAGACCTGATCTATAATGATTC
TATAAATTATTTTTAGTATACGAAAACGTCTTCCATTTAGCTTTATGAGC
AATTTTCATCTCCCTCATGCTCACTTGGTTTGTACAGATAGCTAGCTACA
TTGGTGATTTTTTTGTAGGACCTTTTACCAGAGTCATTATCTTACAAACA
TAATTTTGATAAGATTCCACTGGATTTCATGAATCAAAACTAGTCTGCAA
CCAAACTTCAAAAATAACCAACCAATATCACCATGCTAATTGTATATTCT
TCTGCTTATGGCTATTATAGGCTTTAACTGCGCTCCTGGAGGATGACAGC
AAGTTTGGATTCATTATAATGGACGGTAACGGCGCATTATTTGGAACACT
TTGCGGNGCTTGCAACATATTAACGCTCCTTACTTTTGAAAAATAAGAAA
AATGTATCCCTTTTTTGACAAGCATGGTTTTTGCATTATATTGGTTAAAT
TTTGTTAAATTGGTTACTGTAATTTTAATTTCGGCAACATATGAAAGCCT
GAAACACAGTTCCCAAGTTAAAGAAAGAAAATGTCATCGTAACAAAATAA
TGTATTTTTATCTGATTTTCTTTGGGGCTGCATTGGCAATATCCACTGTT
TCAATGTGTGAATATCTCTTTTGTTGTCAATTTCAGTACCTCCAAACGGT
TTGGTTGTTTATTGTGGTACTATTGTGACGTCAGAAGGAAAAGAAAAGAA
AGTTAATATTGATTTCGAGCCTTTCAAACCAATCAATACATCTTTATACT
TATGTGACAATAAATTTCATACAGAGGTAAGAGCATGCATACTTCTGACT
GGAACAACATTGCAACTACCCCAGAGTTGGGGCACCTACCTGCACCTGCA
GTAATAAAAATAAATAAAAAAAGCAACTCACTTTTTGTAAGGGTCTGAAC
AAACACCATGGAAATTCTTTTAAAGAGACCTGATCTATAATGATTCTATA
AATTATTTTTAGTATACGAAAACGTCTTCCGTTTAGCTTTATGAGCAATT
TTCATCTCCCTCATGCTCACTTGGTTTGTACAGATAGCTAGCTACATTGG
TGATTTTATTGTAGGACCTTTTACCAGAGTCATTATCTTACAAACATAAT
TTTGATAAGATTCCACTGGATTTCATGAATCAAAACTAGTCTGCAACCAA
ACTTCAAAAATAACCAACCAATATCACCATGCTAATTGTATATTCTTCTG
CTTATGGCTATTATAGGCTTTAACTGCGCTCCTGGAGGATGACAGCAAGT
TTGGATTCATTATAATGGACGGTAACGGCGCATTATTTGGAACACTTTGC
GGAAATACAAGAGATGTCTTACATAAATTCACTGTTGATTTACCAAAGAA
GCATGGTAATTTTTTTACACATGTTATATTTCATCTCTTATCTACTGGTG
AAAGCGAAAATATTTCTGCTGAAAGAAATGCATCAAAAAGTATTAAACTT
TGCTTAACTTTGCTTGCTGGTTACTGGGGGCAGATAAGCAAAACTTCAAG
TTGTAGCTCTAAAGTTTTGCAAAGACACGCTGCATGGAATGTAAAGTAAT
TTTTATGAAACACTTTTGACGTTGTCATAGCAACAAACAATTACTTTTAA
AATCATATAATGGCTGGCACCAGTACTAAGAGCGTACCAGTACAATTTTG
ACTTTCTGATATATGAAACCAATTGTTAACCAGTCCCAAATTAATTGGAT
CCTGTCCTTACTTTGAAAGCTGTGCAATCTTAGGATTTACATTTAATTGA
CGATAAATTTGGGGATATTATGAGAAACTTTTCGGCACTGGTAAACAAAT
TATGATGGAGGGTACAGGTGGGTATTCAATTTGATGGATCTTACCGAAAA
CCTAGACCAACGTCCGAGGTTCAGAAAATGCCTTAAAAATGGTTTTCGTA
GGGCACCCCNTGCTTGCCAGACCCCATCGAACGTGGTCTCGTATTTTTAC
TATATTTTTCAAGTTGAAGAAGGGCATACAAGTTTTTAGTTTGCAAAGTT
TATCAGCAACCTAAAGTGATATTGACTCCATTTTCAATCTGTTATTTGTT
AGATCAATGTCGCTGGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCA
GAGTTGAGTCAGTCTGATATGTTTGATGGTGTAAGTGAATTAACTTATAA
TATCCGGTATCGAAATTTATAGACAATACTTTCTTTTTTCAAAGCAATAA
CCTCCTCATCAATTCACGATATGCATCACTGCAATGTCTTCATCATCACA
CCTTAGACCCGACAGCTGATCGGTTGTAAGTGACGTAAAATCAGTCAATA
CTTCACTTTGCAACCAATCAGCTGCTGATGTAATGTTAGAAGACATTGCA
ATGGTGCATATCATGAATGCTGGAACCTAAAAGACTATGGCGACTATTTT
AATTATTCTCACATTTTCTTTACCAGCGGTTACAAGCAAAAATATTGAAA
GTTGTTGATGTTTCATATGGTNTATTTTCCTAGAGGAATTTTCAGAAAAA
GTCATTCTCACGGCTGGATAGCCCTGAAGTAGAAGTATCCAAAAATGGTA
TTGTTTGTCAGCTTTCGTTTCTAGATATTGAAAATTATCGATTTTTTTTG
CTGAGTCAGCAGTTTTTCAGCATATTTACCCACTTTAAAAATGAAATATC
TCAAGAAAGTTAACAAACCATACCATTTTCGGATACTACTAATTCAGGGC
TATCCAGCTGTGGAAATGATTTTTTCTGAAAATGCTCCCAGAAAAATGCT
GACGTCATCGGAAAACGCCAAAAAGGTCGATTTTTAATAAAATCTTCCTC
AAAGGTCGTGGTGGTCAATCTGCTTTACGTTTTGCACGTTTACGTATGGA
GAAACGTCACAATTACGTCAGAAAAGTGGCTGAGACGGCTGTACAGATGT
TCATTTCCAACGATAAAGTAGGTGTTGTTTGTAGCCAGTATTGTTTAAGT
CAACAATTTTCTTTTCTGTAAAAGAAAGGATGAAATTTTACAAAATACAA
GCTCTCGCTTACCAGACCCCATCGAACGTGGTCTCGTATTTTTACTATTT
TTTTCAAGTTGAAGAAGGGTATACATTATATGCAAATGATACCTGCAGTG
TGATAAGTTTTTAGTTTGCAAAGTTTATCAGCAACCTAAAGTGATATTGA
CTCCATTTTCAATCTGTTATTTGTTAGATCAATGTGGCTGGTCTTGTTAT
TGCTGGTTCTGCAGATTTCAAATCAGAGTTGAGTCAGTCTGATATGTTTG
ATGGTGTAAGTGAATTAACTTATAATATCCGGTATCGAAATTTATAGACA
ATACTTTCTTTTTTCAAAGCAATAACCTCCTCATCAATTCACGATATGCA
TCACTGCAATGTCTTCATCATCACACCTTAGACCCGACAGCTGATCGGTT
GTAAGTGACGTAAAATCAGTCAATACTTCACTTTGCAACCAATCAGCTGC
TGATGTAATGTTAGAAGACATTGCAATGGTGCATATCATGAATGCTGGAA
CCTAAAAGACTATGGCGACTATTTTAATTATTCTCACATTTTCTTTACCA
GCGGTTACAAGCAAAAATATTGAAAGTTGTTGATGTTTCATATGGTGGTG
AAAATGGTTTCAACCAGGTATCTAGCTGTTTGTTCGAAATGCGATAGAGA
GTCTTCCTTTATTTGCCAGAAGTACGACTTTCTGAATGTGTTTTTCTAAT
AGCCCTAACGATAATAAAAATGTATCCTGAGCTTCATCGAATATTTCTAT
TTACATTGTTTCTTTTGTTTCTTTTCAGGCAATCGAATTATCAGCCGAAG
TTCTTTCAAACGTCAAGTTCATTCAAGAGAAGAAATTGATAGGTATAATG
AACGCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAAATT
AACCCATGTCCGTCCGTCCGTCCGTCCGTCCGTCTGTTACCAGCTTTTCT
CAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAAT
GGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATAA
AATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGG
TTTTTTGTGCAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGTG
GTTTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTT
CGGGGAAATTCCCTTTAACCAAATAAGAAAATTTCTCAATGTTGACTCGT
TATTTTTTTCTGATTTTTTGCACAATGATACAAAATGGCAATGCCTAAAA
TGTGTCGGAGCCCGATTTTTGAAAAAAAATATATTTGGGCAAATTTGGAC
CAAAAACTGCCTAAAAATAGGGTTTTTTCGACTTTGTGCAAAATCTTGTC
ATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAGGACAAGATTCTCTAA
AGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGA
TGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATTTC
TCAATGTTGACTCGTTATTTTTTTCTGATTTTTTGCACAATGATACAAAA
TGGCAATGCCTAAAATGTGTCGGAGCCCGATTTTTGAAAAAAAATATATT
TGGGCAAATTTGGACCAAAAACTGCCTAAAAATAGGGTTTTTTCGACTTT
GTGCAAAATCTTGTCATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAG
GACAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTT
ATTCGCCTTAAAAGATGGATTTTCGTATTTTGGGGAAATTCCCTTTAACC
AAATAAGAAAATTTCTCAATGTTGACTTGCATAATTTTTTTCTGATTTTT
TTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGAAGGAGCCAGATT
TTGAAGGAAAATTTTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAAGG
TTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTCAACAC
ACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTT
TTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCGTTCAGCATGTT
GCTTGTTTTCTTAAGGATGTACCAAGATCCTTCAATGCGACTATAAGTAC
AATTTTTAAGAGCTTTGAACTGAGAAGGTTAAATGTTTTTTCTAAGAAAT
TTATCCTGGTAACAAGATACGATCCTGGACAAAACTGGTTGTCCACACCC
TTCCCAAATATCGATTTTTTGGGGAAAGAGGGGACTTCTCGTTGGAAAAG
GGTGATCGGACACCATTTTTGACAACAATGGTACTACCCTTATCAAAAGT
CTTTATTAACATAACTTCGTTTTTTTTCTCCAGGAAAATATTTTGACGAA
ATCTCACAAGATACAGGTCGCTTTTGTTTCGGCGTCGACGACACATTGAA
GGTATGTATTTTTCTTTCCTCGTACGTTGAGCTCTTTTGAAAAAACGATC
TGCCTTTTCGCTTCACCTGATGCTTTAAGGATGAGAATAGAATAATTACT
TATATTTATTGCATTTTTCGTTTAGACATTATTTTCCTATAATAAATATT
GAAGAATGATGTTTGTTTTTATCCCTTCAGGCTTTGGAAATGGGAGCTGT
TGAAACACTCATTGTTTGGGAAAATCTTGAAACACAACGTATAACCTTGA
AAAATCACAGTTCGGACGGTAAGGATTGTTTGTTTTATCACTCGTAAATA
TGCTTCGTAAATGCAATGCCCTACCTTCGCCGTAAAGATGACTGCCTGTG
TGCAAGAGGCTCAAATAAAGATTAGATACCAACTTTCGAAAAAAAAGTTT
AACCAGGACATAAAACAGATATATTTTCAAATTAGAGTTTGTTCCCAGCA
CAATCTAATATTTGCTTCTTTATTACAAGGAATCATTGTTTGAAAATGTT
GTATCACTAAAATCCAGAATTTTTACCCATAGCTACGAAAAGAAGACTTC
AATAATTATTTTAAGACAATTTCTTTTTCAAGACTTACGAACTTATGACT
GCAAAAAAAATTTTAACGCCTGAACAGACAGGATTAAGCTTCACACAAGC
CTGTAAATTCCTATACTGGGTGCACCAAAAAAAGATATACAGGTTTCTCG
AGATATAGTGAGCTTCAGGATTTATATTTTTTGTTCATTCTTTTTTTATT
GTATAGAGGATGCTCTAACTTGAATTTTGAGCTATTATACATTAAATTTG
AAAAGTAGTTCGAAAGTTATTTCCAACAAACTGACTTTTTTTCCATGTCG
AAATTTCAAAAAAATCATTAAAAACAGCAATCATGCTATAAATAAGTCAA
AATGACAAAAACACAATTTCATTGTTTTTTTTTATTCTTTTTTCTCCTAT
CTTATATTTTGCCAGCAGTTTGCCATCTTATTTGTCATGAACATTTCCAA
CACCAGCAAACTCAATGCAGAACCAAGTCCTTTAAGCAACTACCTTAAGT
GGATAAATTTTGGCGGGGATTAAATTTGGCGAATTTTGATAAAATTCGCC
AAAGTAAATCCTCGCCTAAATTTCAAAAATCGGCCATTCGCCAAATTAAA
TCCCCGCCAAATTTCACAAAATTGATCAATCGCCAAATTAAATTCACGAC
AAAATTAATCCACTTAAGGTTGACTCGACTAGGAATGGTGATCTATTTTT
CAAAACTTTTCTCACATAGCATACACACATAACATCAAAACCTCTCTTGG
AGATTTACAAAAAAAAATTCAGCTTTGAGTATTTGGATGGGTCACAGGCA
AGAAACAACAAAAATTTATTTATTCATTGATAAATTTTCCCCCTACTCTA
TGGTAGAGCATCTTCAGATCTAACATAACTCATAAAAAAAACCTATCTTA
TAGCATCTAGCATCTTCAGACATTTGATTAAAAAATTATTTTTATTCCCT
AGATAAAAAATTAATTAAGTTATTCTTATGAACAATAAAATCATTAATAA
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGAAT
AACTTAATTAATTTTTTATCTAGGGAATAAAAATAATTTTTTAATCAAAT
GTCTGAAGATGCTAGATGCTATAAGATAGGTTTTTTTTTTATGAGTTATG
TTAGATCTGAAGATGCTCTACCATAGAGTAGGGGGAAAATTTATCAATGA
ATAAATAAATTTTTGTTGTTTCTTGCCTGTGACCCATCCAAATACTCAAA
GTTTTAATAATGGAAAGGCAATCACTGAAGAGTTTTATAACAAAAATTCA
GCTTTTCCAAAAATATCACCCACATAGGAATATCTTGTTTTACCAAATTC
TTATATTTCGTAACGAGTTTTGATGAACACAGTTGTATTTTTTGGTATTT
TTATCTGTAAAGAAGGTAAAGTGTCAAGAGAAAAGTTTGCTTGCTGTTTT
TGATGATTTTTTGAAATTTCAACATTAAAAAAAAGTCAGTTTTTTGAAAT
AATTTTCGAATTACTTTTTCAAACCTAATGCATGATAGCTCAAAATTCAA
GTTAGAGCATCCTCTATGCGATAAAAAAAAATGAACAAAAAATATAAATC
CTTAAGCTCACAATATCTCAATAAAGTCGTATACTTTTTTTTGGTGACCC
GGTATACCGAGTTACTAATTGTTTTTCTTTTATAGATAATAACATTTTGC
TACTGAATCCTGAACAAGAAAAAGATAGAACAAACTTCCTGGATAAGGAA
GTAAGACTTTTATAATAAATCATTAGTCATAATCGTTTGTGAAATTTTGC
GATTGTGAGTAATTTCTTTTGAGCTTTTATGCTTCATGGTTTCAGCCCTC
TCCCAAATTTTTCATCGTCATAATATTTTCATAATTACTTTCTTGCATAA
GCTTAAAAAAGAAAAATGATTTTAAATGAATGCTCTGACCATTGCTATAT
AACTTACTTCTGTAATTTAGTGTCAGTTTTAACAATAAAGGCCGGTCATA
TCAACTTAAAATTTTATTCCACCATAGACTAACGTTGAGTTGGAAATATT
GGACAAAATGCCGCTCTTGGAATGGCTTGCTAATAATTACAAATCCTTCG
GTAGGTTTACGAACATTCTTTCGAATCATTTCTGCTTACAATTGCCTTAA
GACAAAAGTTTTAAAACACTCATAAATTTAGGAACGCGTAAAAGTGTTTT
AACGAGTTTGAACAAAACCCACGAAATTCGCCAAAATTACTTTTTGCTGA
AATCAGTTCCCTTAGGTATCTTTCTAAATAAAACAAGAGACTGATTGTGG
TAATTTTCTTTGCAAAGGTGCTGCATTGGAAATCGTTACAGATCGTTCAC
AAGAAGGCTCGCAATTTTGTCGTGGTTTCGGTGGTATTGGAGGTGAGACT
TCTTCCCTCTCCGATAACTGTTATCATTAATTTTCTAAACACTTACTGCC
ACTTAAACGATGACATGTGATGGTAGATATTAAGTACCCGGGAAATTTTG
TAACATGCGAAATTTAATACCATTTTAAAGGTACACTCTTGTTTCATAAG
AACCAGTAATTTTTTAATTGCGACTTAGCTGTACTTATATTTTGTCACTT
TGAGCCTCAATGGTGTAATCGTGCTTTTTTTGACGAGTTTGAGCCTGCTT
CTCATAAGATTGTTCTTATAAAAAAAACCATGTTCGATTTGAATTCAGAT
TTTGAAACACAATTTTGTGAGCCTGTAAACAAATACCAGAAGGAACATTA
TTTTTTTCTGAGATTTTTGAGCCAATATAATTGTCTCCGCGACCACGGTG
AGTTATATATGAATCTCTTTTATCACCAGTAGAATGGTATATAAACAAAA
ATATGTACAGGTTAAAAAGAAGAAAATTATGTTATGAAAGGTTCATTCTC
ATTTTAGGCTAGTACTCAACGAACCGTTATGTAACCTAGGTATTGGCATT
TTATTTTTACTTTTCAATCGTCAGGTTTACTGCGGTACAAAGTGGACTTT
CAATCGATGGACTACGATGATTTGGATGACCTTGACTATTACGATGATGA
CGATGAATCTCTCTTCTAAATAGTGAACAAAAAATGAAAGATTTTATCAA
ATCATCCCATCATCGGTATAAATACACAGAAAGTGCAATACAGTGAAGTT
TCATTACGAAACGCCATTGAACTGTTGATACCGAAGAGCAACTGAATGGT
TCCATCCTATGGCTGGTGGCACGAAAAACAGTTCGCTTTTAATGATTTTG
ACGTTAAAGATGGGGGTGTCTCCTCTATAAGTGAAACAAACGACGACCTA
ATGACGTTTCAGCAATAACTGTAGAAGACAAGAAAGAAGCCTTTGAATAG
GCTCATCAGAAACGAGGGCGATATTTTATTTTTGAAAATCGAGATTTTAT
TTTATTTGGTTTTTATTGTAGTTCTCCATTGTTGTTTTTTCTTATTTGTT
CGCCATTCTCCAAAAAGACTTTTATCGTGAAAAGTCCAAGACAAGGTTTT
TACAAATTCGCCGACGTAGATTCCAATGAAAACCAGAATGTTATCTCTCA
TTTAGCATGACCTTAAATAGTAAAGTAAATTTTGTGTTTTATTACTGGGC
ATTTGTATTTTTGTGTATTTATTCAGATAATTTCAGAATAACAGAATTGT
GTCAATCGTTCATATTTGTCTGACTTCCAATTTAAGAGTTGCCTAACGAC
TACCCAACGAGGGTTGTTCCAGAAGCTTTTTTTTATATATATTCTAAAAA
ACATCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007198XLOC_007198Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012841-exon-sc0000156-1575043694:352688..353042TCONS_00012841-exon-sc0000156-1575043694:352688..353042Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:352428..352544TCONS_00012841-exon-sc0000156-1575043694:352428..352544Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:350578..350636TCONS_00012841-exon-sc0000156-1575043694:350578..350636Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:349167..349306TCONS_00012841-exon-sc0000156-1575043694:349167..349306Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:348588..348726TCONS_00012841-exon-sc0000156-1575043694:348588..348726Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:347026..347138TCONS_00012841-exon-sc0000156-1575043694:347026..347138Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:346688..346765TCONS_00012841-exon-sc0000156-1575043694:346688..346765Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:346326..346391TCONS_00012841-exon-sc0000156-1575043694:346326..346391Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:346101..346164TCONS_00012841-exon-sc0000156-1575043694:346101..346164Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:344292..344359TCONS_00012841-exon-sc0000156-1575043694:344292..344359Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:344025..344112TCONS_00012841-exon-sc0000156-1575043694:344025..344112Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:340693..340757TCONS_00012841-exon-sc0000156-1575043694:340693..340757Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:340343..340415TCONS_00012841-exon-sc0000156-1575043694:340343..340415Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:340051..340125TCONS_00012841-exon-sc0000156-1575043694:340051..340125Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1575043694:338684..339468TCONS_00012841-exon-sc0000156-1575043694:338684..339468Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:352688..353042TCONS_00012841-exon-sc0000156-1510915933:352688..353042Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:352428..352544TCONS_00012841-exon-sc0000156-1510915933:352428..352544Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:350578..350636TCONS_00012841-exon-sc0000156-1510915933:350578..350636Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:349167..349306TCONS_00012841-exon-sc0000156-1510915933:349167..349306Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:348588..348726TCONS_00012841-exon-sc0000156-1510915933:348588..348726Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:347026..347138TCONS_00012841-exon-sc0000156-1510915933:347026..347138Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:346688..346765TCONS_00012841-exon-sc0000156-1510915933:346688..346765Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:346326..346391TCONS_00012841-exon-sc0000156-1510915933:346326..346391Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:346101..346164TCONS_00012841-exon-sc0000156-1510915933:346101..346164Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:344292..344359TCONS_00012841-exon-sc0000156-1510915933:344292..344359Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:344025..344112TCONS_00012841-exon-sc0000156-1510915933:344025..344112Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:340693..340757TCONS_00012841-exon-sc0000156-1510915933:340693..340757Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:340343..340415TCONS_00012841-exon-sc0000156-1510915933:340343..340415Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:340051..340125TCONS_00012841-exon-sc0000156-1510915933:340051..340125Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1510915933:338684..339468TCONS_00012841-exon-sc0000156-1510915933:338684..339468Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:352688..353042TCONS_00012841-exon-sc0000156-1491911889:352688..353042Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:352428..352544TCONS_00012841-exon-sc0000156-1491911889:352428..352544Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:350578..350636TCONS_00012841-exon-sc0000156-1491911889:350578..350636Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:349167..349306TCONS_00012841-exon-sc0000156-1491911889:349167..349306Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:348588..348726TCONS_00012841-exon-sc0000156-1491911889:348588..348726Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:347026..347138TCONS_00012841-exon-sc0000156-1491911889:347026..347138Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:346688..346765TCONS_00012841-exon-sc0000156-1491911889:346688..346765Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:346326..346391TCONS_00012841-exon-sc0000156-1491911889:346326..346391Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:346101..346164TCONS_00012841-exon-sc0000156-1491911889:346101..346164Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:344292..344359TCONS_00012841-exon-sc0000156-1491911889:344292..344359Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:344025..344112TCONS_00012841-exon-sc0000156-1491911889:344025..344112Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:340693..340757TCONS_00012841-exon-sc0000156-1491911889:340693..340757Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:340343..340415TCONS_00012841-exon-sc0000156-1491911889:340343..340415Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:340051..340125TCONS_00012841-exon-sc0000156-1491911889:340051..340125Clytia hemisphaericaexon
TCONS_00012841-exon-sc0000156-1491911889:338684..339468TCONS_00012841-exon-sc0000156-1491911889:338684..339468Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:338684..353042 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.50588	9.4845	7.4468	11.4472	18.6306	16.4908	21.4674	26.401	7.63696	6.57444	11.6427	12.6972	12.862	17.2122	14.0265	11.718	11.0353	12.7555	6.40111	7.92951	22.1739	20.5623	9.8207	12.9038	40.3884	45.0188	14.624	23.937	7.36154	5.8114
Blast
[Close]
BLAST of TCONS_00012841 vs. Swiss-Prot (Human)
Match: ERF1 (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3)

HSP 1 Score: 741.88 bits (1914), Expect = 0.000e+0
Identity = 353/422 (83.65%), Postives = 387/422 (91.71%), Query Frame = 3 
Query:  270 MSGQEQETDRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQISRIAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTSEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLEDDSKFGFIIMDGNGALFGTLCGNTRDVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQMFISNDKINVAGLVIAGSADFKSELSQSDMFDGRLQAKILKVVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGRFCFGVDDTLKALEMGAVETLIVWENLETQRITLKNHSSDDNNILLLNPEQEKDRTNFLDKETNVELEILDKMPLLEWLANNYKSFGAALEIVTDRSQEGSQFCRGFGGIGGLLRYKVDFQSM 1535
            M+      DRNVEIWKIKKLIKSL+AARGNGTSMISLIIPPKDQISR+AKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVT EGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALL DDSKFGFI++DG+GALFGTL GNTR+VLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQ+FIS DK+NVAGLV+AGSADFK+ELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS EVLSNVKFIQEKKLIG+YFDEISQDTG++CFGV+DTLKALEMGAVE LIV+ENL+  R  L    +++  IL L PEQEKD+++F DKET  E E+++ MPLLEW ANNYK FGA LEIVTD+SQEGSQF +GFGGIGG+LRY+VDFQ M
Sbjct:    1 MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422
The following BLAST results are available for this feature:
BLAST of TCONS_00012841 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERF10.000e+083.65Eukaryotic peptide chain release factor subunit 1 ... [more]
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