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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012611 ID=TCONS_00012611|Name=TCONS_00012611|organism=Clytia hemisphaerica|type=transcript|length=2280bp
CAAGATCTCAAAACCACTTGTTCTTGGCCTGTTGGCTTATTTCCTTGGCT
TGGTTTTGTTACTTGGGCCGAAAATCCATGTTCATATCTTCTACATGTAT
TGACAAGACATGGCTAAAAAATCAATTAACTTCAACACAATCACTCTACA
AGAGCTTGAAAAGATCCCTGGTATTGGAAAGTTTAAAGCCCAATCACTGG
TTGATGAACGAAACCATAGATTGTTTAAGAACATAAATGACTTGATCAAA
GTTGAAGGACtcactttgttatttttaaacagACTTCAGAACAAATTTGA
CTTTATTTTCGATACACAATCACCATGCAAAACAAATGCTCTAAAAAGGA
AAACCGAAAATGTAGATACTTCAATTGATGAAAAAGACAATGGGATCACA
ACACCAGAGAAGAAAGCCAGACCAAAATATAACAATAAATGTGCTTCAAC
TTCCAGCTCAAAGATTGTCCCAAATGTGGAGAATGCTCTTTGTAATAGAA
CTATACCTTCATGTGATAGTCCTGGAAAAGCAGTACGTAGTAGGCTTCAA
TCAGAAACAGCTAAGCCACCTGATGGACTTCCAGATTGGTTGAATAAATT
CCATGACTGGTCCAGAGATGAGAGATTGATTGCGTTAAATGACTTGATAG
GTTTATGTGATATGTCGGTCGTCAGACACATGATGGCCAAAATTGAGCCA
CATTTTCAAAGGGAttttatatctttattaccAAAAGAGTTGGCACTCTA
TGTTTTATCTTTCTTGGAACCAAAAGATTTATCAAATGCTGCAAGGACTT
GCAGATATTGGAGGATCCTTGGAGAAGACAATCTGTTATGGAAGGAGAAA
TGCCATGAATATCAGTTATTTTATCCTCTAAGTGATCTTTTAGAAGAAGG
AAAGGTTGATAAGAAGGCATCACAACCTAATGAGGCACCTTACAAAGAAC
TTTTTGCTTATTGTCACAAATTGGAGCGGAATTGGAGGTCAAACACTTTG
AGGCCTGTCATGTATTTAAGAGGTCATGATGATCATGTTGTAACTTGCTT
ACAGTTCGACGGTGTTCGTATAGTCAGTGCCTCAGATGATAATACGTTAA
AAGTGTGGTCTGCTGATACTGGAACTTTGATTCGCACCCTTGTGGGACAT
ACAGGTGGTGTGTGGTCATCACAATTAAGTGGAAATATAGTTGTGAGTGG
CTCAACAGACAGGACGCTGAGGGTCTGGAATGCTGATTCAGGAGAATGTA
TCCATGTTTTACAAGGTCACACATCAACTGTTCGTTGCCTGGCAATGCAT
GGAGATAACGTAGTAAGCGGATCCAGAGATGGAACTCTACGTGTCTGGGA
TGTCATGAAAGGAACACATCTTCATGTTTTGATTGGTCATGCAGCTGCTG
TCAGATGTGTACAATACAATGGTAAATACGTTGTCAGCGGTGCTTATGAT
TATTTGGTAAAAGTTTGGGATGTTGAAACAGAGACTTGTTTGCATACTCT
GACTGGTCATTCAAATCGTGTCTACTCATTACAGTTTGATGGTAAATACA
TCGTGTCTGGCTCTCTGGATACTTCGATACGTGTTTGGGATGCTCTTAGT
GGGCAGTTATTACACACACTCTTAGGTCATCAATCTTTGACTAGTGGAAT
GGTGTTGAAGAATAATTACTTAGTATCTGGGAATGCAGATTCTACTGTAA
AAATCTGGGATATTGTGTCTGGACAATGTTTACATACTTTAACTGGTCCC
AATAAACATCAAAGTGCTGTGACTTCTTTACAATTCAATACTAAGTTTGT
GGTTACTAGTTCTGACGATGGATCAGTGAAATTATGGGATCTAAAGACAG
GAGAATTCCTTAGAGACTTGGTTGAATTAGATTCTGGAGGATCTGGCGGT
GTGGTTTGGCGTgtcaaatgcaatgaaaagaaACTTGTATGTGCAGTTGG
TAGCAGGAATGGTACAGAGGAAACTAAACTGTTAGTGTTAGATTTTGATA
TTCCCTCTATACAATTTACGTGATTTCAAACTATGATTAATGGGTTGTCC
TTGGCATTATACTAAGAAATTTGTATCCACTCACATGTAGCTTAGATCAC
CAGTCTTCCTATGCGAATATAGGGAGATtgtttaaagtttctttttcatC
AGTTATTCAATAAATCCTTATTATAATATTCGTTTATTCagaatttatca
attttttatatGTTAATTTTATATTAATGTTATAGTAGATGTGCATTTGC
TCTTCTTTCATACAACAAACAATAATGTGC Run BLAST on NCBI transcript from alignment at sc0000146:127972..137516+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012611 ID=TCONS_00012611|Name=TCONS_00012611|organism=Clytia hemisphaerica|type=transcript|length=9545bp|location=Sequence derived from alignment at sc0000146:127972..137516+ (Clytia hemisphaerica)
CAAGATCTCAAAACCACTTGTTCTTGGCCTGTTGGCTTATTTCCTTGGCT
TGGTTTTGTTACTTGGGCCGAAAATCCATGTTCATATCTTCTACATGTAT
TGACAAGGTAACCATTCACACAATTAGATCAGATTTTTCTGCATAGTAGG
TTTTGTTTTaatcatttttacatttttcttaaaatttccatCATGGCAGT
TTTTCATTGTGATTTCTGGCAGGCTTGCCTCTTGTGGACCCTCTTCATTT
CCATTTGGATTAGAACCTACATGACTATCAAGGATCAGCTAGTACGAAAC
GCAGGTTAAGGTTACAGGTTTCAGGGccagggttcaggtttcagggccag
ggtagggtgcgcactcgtcgggattttttgcgtggaaaaagtcgaaaatc
aaaattagaacattccatccatcataacttatccttaacaactccaaact
tgttcattcttttttttttaatactcagaatttatcagagaaaacaaaga
aaaaaaccccatcccattacctaccttcaataaaaagatatacaaTTTAT
TAGACATCAAGGTGGAAAAATGGCGACTCGGAATTTGTGGCACCACCGTC
GaccttgaccaccatttttcaaatggctatcgctaatgagctggatttGT
TATGGACtcacagttttttttataaaacgcgggaaagatcgtactttagt
ttgtcacgtggtagccttttcgataatctacgggccatctttaaatcgag
aaaaaagaagaaatttcgatttttcggcactttcctgaaatttttatcag
ggctaccatatatggttggaaagctaagggtttcAGCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCATTAGCGataggctaaagtttaacagtcatcgggccgattttc
agaccgcgccagcaaaactcctcacgccctgccacacggaagactacaTT
TCATCCGctatttttggcgcgattttggtgcttccgaaaattatttcttg
ctggcgtggtgtaaggaggcgattctttgaaaaggtgttttttttgtggt
ttgaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtaataaatgacccctcatttttc
tcacaaaggtaaggactttcaaataaaattagtttggttttcaaaatttg
aggggaaaattttggcctgaccaccctagccagggttcaggtttcagggc
cGGGGCTCAGGTTTCAGGACCAGGGTTCAGGGTTCAGAGCTCAGGTTAAA
ATTATCTACAAAACAGACTTGCCTTTTTCAAATTACTGACCTCTTTActt
ctcttttctctttacaCTCTTTGTGTGGGGGGAGGGGGATCAAACAAAAA
AGCGAGGGTTGAATGGCATGGAATGCATTCACACCTGACCTTTCACAtct
ttatttgataaaaatttacaGTTGGTATTTCATTTGAGTAATAAAAGCTT
CGTTGTTAAAAAcgccgataaaatttttcttttaagaacacaaattcaac
aaaaaattaagttagTTTTAgcagattttacaaaaaagagaaaaaaaatt
tgtcgtCTTCTATTCCAGCCAATTTCATCTTACCAAATAAGTTttataaa
aaactatttctttttaaaaaatgggtGGGTGATACTTTcttgctttgaaa
gaaaaaataatttaatgttaCGGATGATTTCCACTGGTTCTGATCTTACT
CTTTCAAAAAACGATAAGCGTTTTGCCATATTTCTTTTTACAGGAGGAAT
AATAtaacttattattttttcgttattATTCTGTTCAATATAATAGTAAT
TGTTCTTGGTTAATGCTTTGATTTATAATTCTGCTTGTAATAGAATATTT
TAGTTAATTATTGTTTATTCAACGAGTTTTGTAACAAAAAGATAATTTGT
ACGTCAAAtgaattatgaaatattttcaaagcaaCGCTGAAAGTAGTAGT
GGTAGTACCTGCTGTCTcatattttaaaaagtattgcTCACCACCAAAct
attaaaagtttaaaaagaaaacacacaAGTATTATATAGAACATCAAGCA
AATGGTCTGCAGAATAAATAAATATGCCTTGGAACATTCTGGTCTGCAAT
GTACACAATTTTAACATGaaccctgaaacctgaaccctggCCCTGAACCC
TGAACCCTGGCCTTGAAACCTGAACCCTGGCCCTGAAACCTGTGACCTGG
GCCTGTGTTTCGTACTAGCCGATCAAGGATGTAGATCAGAACATTTTGCT
GAAAGGTTCAGAAAATGAGCTTTGAGCACATCTTGCAATAGACCTTTCCC
CTTTCCTCTCCATCATCCTGCCATAttcagtcaggacctctttggtcttt
tttaacattagttcggttagaataaaaacatacctgatcaacacaaccaa
accttctgtcttgcatttactctttccttcccaacaacttttgtttttgg
ttATGTGGGTTTTTAAAGTCCACTTAAGTatagtaatgaacctcttatac
gcttatctgaataaatctggttgaaaaccttctgtcaggtttcattccgt
acgtttattatccacgtggtgaaccggtctacgaattattttctttaacg
ggcgttgaatcgacaatgacatatttaatgatgtcataatcatcaatgcc
gtgcatattttgtcaatgccgtgcatattttgtcagcgccatgcatattt
tgtcaacatccttttcattggataaataccactaaaatatacaagataag
taaacataaatttattgcCCGCGAGCATTATCTcagaattgaagcgggca
aagattactgCGCAGATTGATAGCGGAcaaaggttttttgaagatatttt
cagttataatctaaggtagaacaaactaaacatagaaagggagtATTTTT
CAGTGCTCTATATGATGAtcagtattttttttgaattctatgtttagatt
tttctacccagccccgttgctatgtacgcacgccctgttgctaagacctt
tgcttgaaatcggaactgaaaccaaaataatttagcgcacactgccgttt
gcgtaatatcaataaagtgaaatgaggtcctgactggcCATATtgaatgg
gctattccaaaaaaatattgtataggggtattgacgaactatcccctgga
aattaggggtcgacacccctggaaagtgaaattttgtgaaaaagggcctg
GAAAATACCTATTGTTGATGTCAGTTTAGGAGgagagaaccccctggaaa
atatcccccttggaaaatctgaaaaatgaacaaaaacccttggaaaatca
aggctcagaccCTCTGGAagagttcgtcaatacccctgtatggtttaaaa
atggaatagcccaatttttGTATgcaaatcatcatcatcattccCCTTAG
AAAGTAtccaaaacatatgcaaaaagaaagtattaatttaaaacttacat
gcataattggcattatattaatgtgtaatcttgtagaagaaagattaaat
ttgcttctcttgaaaattaaaaataatcatattcgctcatctcttaccGT
CAATtgttctaacttgggacgattggttgaaacattgAGAATGTTGATAT
TCTGGCCTGTagtttcacttactgttaaatctctttgacaacaaatttgt
tttgataactccgccaagtttatcaatcaaactttctgtcataacatgtc
acgataactttcactgatagtgcaccctttttagtttttttgttttcatt
caaaatgaccggacaatgattggagaattagagaacgcctgtGGGATAAC
CGCCTATTGCCTGATGGGATTTACAAATAACGAGTAAAACAGgggttttg
atattttcttgcACAAGAAAGAgaatgtgtgtactccgtcttcgtggaat
tttttaatggcatgaaaacagaatatgctatgtctttaagaacagtttct
aaaaggcttttattGTTCTGTAagttattttctatttcttttatGCTTAT
TAGGGCTTCTAATTAAAATAAAAGGTGCTTAGCCAATCTAACGGTCATTT
CAGACAAAATGTTCAAAGGGGATGCATCCCTTTAGAACCACCCAATTTAC
CTCACATGGTCCAGGTTTGCTTGTCAGTAAATTATGCATGCAAACTTAGT
TCAAGTGATTTATTTTAGTAAGCTTTTTTGGGACTGgtcaaaattttaga
tgtttaGATGATAACTTTTTATTGACTAAACAGATAACAAAGCTTCTtat
aaatcaacaaaaattgttcttattgactcgctttcttcgtaactttcatg
agtgtttctaagatcacttttatcggcttgtttacttcataactttcaag
agtgtttcttaGTAAATATTTATCGATTCGCTTTCTTcttaactttcaag
agtgtttttaagaccacttttatcaacttgcttacttcataactttcaag
agtgtttctaagatcacttttatcggcctgcttacttcataactttcaag
agtgtttaaaagttaactttatcaacttgcttacttcgtaactttcaaga
gtgtttctgagatcacttttatcaatttacTTTCTTTGTTAccttcaagg
gtgtttcaaagttaacttttattgaCTCGCtgtcttcgtaactttcaaga
gtgtttttaagaccacttttatcaacttgcttaggcggtcatcgaaaaat
tgttgtATTCgggtcacccgcccgcatcaaattttccgctgattttccgg
tgcggagatgcggaaaaaaatctgggaaaagcaatttgttctttttaaag
catagcttttttctcaattgctctgacgaccatcgaaaaattgttttgct
cgcattaccacccgcccctgtgTTACTGgtgtgattaaaaaaaaaccggg
aatgtttttgaccgcccgtccgcccgcatgtattttaacacccgttgcga
cgcgaacagagcattttttcgatgaccgccttacttcataactttcaaga
gtgtttctaagatcacttttataggcttgcttacttcataacactttcaa
gagtgtttcaaagttaacttttattgactcgctttcttcgtaactttcaa
gagtgtttttaagaccacttttatcaacttgcttacttaataactttcaa
gagtgtttctaagatcacttttatcggcttgctttcttcgtaactttcag
gagtgtttctaagatcacttctATCAGcttgcttacttcataactttcaa
gagtgtttcaaagttaacttttattgactcgctttctttgtaactttcaa
gagtgtttctaagatcacttttatgaatttgctttctttgttactttcaa
gggtgttccaaagttaacttttattgaCTTGCTTTCTtagtaactttcaa
gagtgtttttaagaccacttttatcaacttgcttacttcctaactttcaa
gagtgtttctgagttaacttttatcaactcgctttcttcgtaacttttaa
gagtgtttctaagttaacttttatcaacttgctttctttgtaactttcaa
gggtgtttctaagatcactttaatcgaatcaatttctccgttacagtaac
aaactgttcCAAGGTAACTTTTAGTTTACCTACTCTCTTTCTCCGTAACT
TTCAAGActgcataattttagaaaaatatacactgaatgaccgacaggat
tttgagtttgaccaacaggatttcatttctgttGGACATGATGTCCGATA
GACTAATTATATTTATTTGTAGCCCTGTACTATTGTGTTTTGATTCAGCA
AATTATTGTAATTTTACAGCTAGCCAATAATAAGCAACCCTTAAAAGGCT
CACTTTTAAAATATAAGAATGTTTATATTGCCTgtggcaatttttttaaa
gataattttGTATGAATTCTTTATTCACCTTCATTATAAACATTTTAGAA
TGACATTGTTGACATGATTATAATTTGTTTTGAGGCAGCTCTTATACTTG
TTTTATTTATTACAACCTCGAACACTCAGAGACAAGTTTGTACAATGCTT
AATCTTGATATTTTACTTttaccatagtcattataaaagcACTGATCTGG
AAggcttttttctcttttaatattaaaagatggagcttacgtaccaaaat
caatttattttgcagactttttgatcatgtgattagaaaatagaccaatc
ccaagaggagatttttgtaacatgatcaaaaagtatgcgaattgcaactt
gtcttttgtttgtaagaaaagaaaattgaacaaaaagctaaaacaataca
ttgccagaccggggttttttataatgactatgcttTTACAATGGCTTGTA
CTGATCCTTCTTCTTTTAAACAGACATGGCTAAAAAATCAATTAACTTCA
ACACAATCACTCTACAAGAGCTTGAAAAGATCCCTGGTATTGGAAAGTTT
AAAGCCCAATCACTGGTTGATGAACGAAACCATAGATTGTTTAAGAACAT
AAATGACTTGATCAAAGTTGAAGGACtcactttgttatttttaaacagAC
TTCAGAACAAATTTGACTTTATTTTCGATACACAATCACCATGCAAAACA
AATGCTCTAAAAAGGAAAACCGAAAATGTAGATACTTCAATTGATGAAAA
AGACAATGGGATCACAACACCAGAGAAGAAAGCCAGACCAAAATATAACA
ATAAATGTGCTTCAACTTCCAGCTCAAAGATTGTCCCAAATGTGGAGAAT
GCTCTTTGTAATAGAACTATACCTTCATGTGATAGTCCTGGAAAAGCAGT
ACGTAGTAGGCTTCAATCAGAAACAGCTAAGCCACCTGATGGACTTCCAG
ATTGGTTGAATAAATTCCATGACTGGTCCAGAGATGAGAGATTGATTGCG
TTAAATGACTTGATAGGTTTATGTGATATGTCGGTCGTCAGACACATGAT
GGCCAAAATTGAGCCACATTTTCAAAGGGAttttatatctttattaccAA
AAGAGTTGGCACTCTATGTTTTATCTTTCTTGGAACCAAAAGATTTATCA
AATGCTGCAAGGACTTGCAGATATTGGAGGATCCTTGGAGAAGACAATCT
GTAAGCCATCATCTTTTCTCTTTGTTTGTTCTTTGATAGTGAAACTGAAT
TTTGTTTATGGCAGTGACAGTGTTAGAATATAAATTGTTTTTCTATACTC
TAAATTTAAACAAAATGTGTTATTTTTAGGTCAATTGATGCTATTataaa
aaagcctaaattttcaGAAGGTTGAAACCAATTATTATTCTTTCTTTAGG
TTATGGAAGGAGAAATGCCATGAATATCAGTTATTTTATCCTCTAAGTGA
TCTTTTAGAAGAAGGAAAGGTTGATAAGAAGGCATCACAACCTAATGAGG
CACCTTACAAAGAACTTTTTGCTTATTGTCACAAATTGGAGCGGAATTGG
AGGTCAAACACTTTGAGGCCTGTCATGTATTTAAGAGGTCATGATGATCA
TGTTGTAACTTGCTTACAGTTCGACGGTGTTCGTATAGTCAGTGCCTCAG
ATGATAATACGTTAAAAGTGTGGTCTGCTGATACTGGAACTTTGATTCGC
ACCCTTGTGGGACATACAGGTTTggattatttttatacaaaaaagcATGA
AATGGTCTTAATGTCTTATTGAAACTTCAACCAAGTGGGGCTGCCTATTT
GATATGCGTAATTCTGTCACTTTTATCATCCCACAATATATTTGACTGCT
TCATGATATGTTTAGGACATTTTTGAATAATGTTCTATAAATATTGAATT
ACTTCAAATAGGTGGTGTGTGGTCATCACAATTAAGTGGAAATATAGTTG
TGAGTGGCTCAACAGACAGGACGCTGAGGGTCTGGAATGCTGATTCAGGA
GAATGTATCCATGTTTTACAAGGTCACACATCAACTGTTCGTTGCCTGGC
AATGCATGGAGATAACGTAGTAAGCGGATCCAGAGATGGAACTCTACGTG
TCTGGGATGTCATGAAAGGAACACATCTTCATGTTTTGATTGGTCATGCA
GCTGCTGTCAGATGGTAAAACTGTTCTTAGACCCCACATCCAGGCTTTTG
TGGTTTTGGTTACTTTCTCTGATTTTTCATAATATTTATAGCTCAACAAC
AAACAATTATTTAAGCATAgaattgtaaaaatttaaattgtgcTACACCG
CAACTTTTTTCAACGTATTTCCACTCCAGTTGAAGCTCTCTCCTTAAAAT
CTTGCATCCATTTTTGCTAATGGTGTGTATATTGATTCCATTATACTAGT
TTTAgtaaagaaaacaagttttaaagtTTATTCCATTATATTGATTTCAT
ATATGATATTTATTTTCAACAGTGTACAATACAATGGTAAATACGTTGTC
AGCGGTGCTTATGATTATTTGGTAAAAGTTTGGGATGTTGAAACAGAGAC
TTGTTTGCATACTCTGACTGGTCATTCAAATCGTGTCTACTCATTACAGT
TTGATGGTAAATACATCGTGTCTGGCTCTCTGGATACTTCGATACGTGTT
TGGGATGCTCTTAGTGGGCAGTTATTACACACACTCTTAGGTCATCAATC
TTTGACTAGTGGAATGGTGTTGAAGAATAATTACTTAGTATCTGGGAATG
CAGATTCTACTGTAAAAATCTGGGATATTGTGTCTGGACAATGTTTACAT
ACTTTAACTGGTCCCAATAAACATCAAAGTGCTGTGACTTCTTTACAATT
CAATACTAAGTTTGTGGTTACTAGTTCTGACGATGGATCAGTGAAATTAT
GGGATCTAAAGACAGGAGAATTCCTTAGAGACTTGGTTGAATTAGATTCT
GGAGGATCTGGCGGTGTGGTTTGGCGTgtcaaatgcaatgaaaagaaACT
TGTATGTGCAGTTGGTAGCAGGAATGGTACAGAGGAAACTAAACTGTTAG
TGTTAGATTTTGATATTCCCTCTATACAATTTACGTGATTTCAAACTATG
ATTAATGGGTTGTCCTTGGCATTATACTAAGAAATTTGTATCCACTCACA
TGTAGCTTAGATCACCAGTCTTCCTATGCGAATATAGGGAGATtgtttaa
agtttctttttcatCAGTTATTCAATAAATCCTTATTATAATATTCGTTT
ATTCagaatttatcaattttttatatGTTAATTTTATATTAATGTTATAG
TAGATGTGCATTTGCTCTTCTTTCATACAACAAACAATAATGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012611-exon-sc0000146-1491911889:127972..128078 | TCONS_00012611-exon-sc0000146-1491911889:127972..128078 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1510915933:127972..128078 | TCONS_00012611-exon-sc0000146-1510915933:127972..128078 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1575043694:127972..128078 | TCONS_00012611-exon-sc0000146-1575043694:127972..128078 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1491911889:134645..135371 | TCONS_00012611-exon-sc0000146-1491911889:134645..135371 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1510915933:134645..135371 | TCONS_00012611-exon-sc0000146-1510915933:134645..135371 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1575043694:134645..135371 | TCONS_00012611-exon-sc0000146-1575043694:134645..135371 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1491911889:135571..135890 | TCONS_00012611-exon-sc0000146-1491911889:135571..135890 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1510915933:135571..135890 | TCONS_00012611-exon-sc0000146-1510915933:135571..135890 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1575043694:135571..135890 | TCONS_00012611-exon-sc0000146-1575043694:135571..135890 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1491911889:136083..136335 | TCONS_00012611-exon-sc0000146-1491911889:136083..136335 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1510915933:136083..136335 | TCONS_00012611-exon-sc0000146-1510915933:136083..136335 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1575043694:136083..136335 | TCONS_00012611-exon-sc0000146-1575043694:136083..136335 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1491911889:136644..137516 | TCONS_00012611-exon-sc0000146-1491911889:136644..137516 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1510915933:136644..137516 | TCONS_00012611-exon-sc0000146-1510915933:136644..137516 | Clytia hemisphaerica | exon |
| TCONS_00012611-exon-sc0000146-1575043694:136644..137516 | TCONS_00012611-exon-sc0000146-1575043694:136644..137516 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146 | supercontig | sc0000146:127972..137516 + |
Blast
BLAST of TCONS_00012611 vs. Swiss-Prot (Human)
Match: FBXW7 (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1) HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0 Identity = 344/518 (66.41%), Postives = 406/518 (78.38%), Query Frame = 2
Query: 449 TSSSKIVPNVENALCNRTIPSCDSPGKAVRSRLQSETAKPPDGLPDWLNKFHDWSRDERLIALNDLIGLCDMSVVRHMMAKIEPHFQRDFISLLPKELALYVLSFLEPKDLSNAARTCRYWRILGEDNLLWKEKCHEYQLFYPLSDLLEEGKVDKKASQPNEAPYKELFAYCHKLERNWRSNTLRPVMYLRGHDDHVVTCLQFDGVRIVSASDDNTLKVWSADTGTLIRTLVGHTGGVWSSQLSGNIVVSGSTDRTLRVWNADSGECIHVLQGHTSTVRCLAMHGDNVVSGSRDGTLRVWDVMKGTHLHVLIGHAAAVRCVQYNGKYVVSGAYDYLVKVWDVETETCLHTLTGHSNRVYSLQFDGKYIVSGSLDTSIRVWDALSGQLLHTLLGHQSLTSGMVLKNNYLVSGNADSTVKIWDIVSGQCLHTLTGPNKHQSAVTSLQFNTKFVVTSSDDGSVKLWDLKTGEFLRDLVELDSGGSGGVVWRVKCNEKKLVCAVGSRNGTEETKLLVLDFDI 2002
TS++ +VP + + + G+ R R+ S +PP GL +WL F WS E+L+AL++LI C+ + V+HMM IEP FQRDFISLLPKELALYVLSFLEPKDL AA+TCRYWRIL EDNLLW+EKC E + PL ++ KV K +P+K + H+++ NWR L+ L+GHDDHV+TCLQF G RIVS SDDNTLKVWSA TG +RTLVGHTGGVWSSQ+ NI++SGSTDRTL+VWNA++GECIH L GHTSTVRC+ +H VVSGSRD TLRVWD+ G LHVL+GH AAVRCVQY+G+ VVSGAYD++VKVWD ETETCLHTL GH+NRVYSLQFDG ++VSGSLDTSIRVWD +G +HTL GHQSLTSGM LK+N LVSGNADSTVKIWDI +GQCL TL GPNKHQSAVT LQFN FV+TSSDDG+VKLWDLKTGEF+R+LV L+SGGSGGVVWR++ + KLVCAVGSRNGTEETKLLVLDFD+
Sbjct: 194 TSTTGLVPCSATPTTFGDLRAANGQGQQ-RRRITS--VQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH--IKRRKVIKPGFI--HSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 704
The following BLAST results are available for this feature:
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