TCONS_00012610 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012610
Unique NameTCONS_00012610
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012610 ID=TCONS_00012610|Name=TCONS_00012610|organism=Clytia hemisphaerica|type=transcript|length=1877bp
GGAGAACTTCATCATACCTGATGGAACATCAGCTTGAAAGTTCTATAAAG
ATTGGTTCTACAGAGATTGCATAAATATTGACGCTAAAGATTTTAGCAGT
ATTATATTGAGAGAGCTATAAATGGAGGATTATTGACTCCCTGACAGCGT
ACAACATTACAAATATCTTGGAAGAAAGGCACTGCTGCTGAGACATTGTC
GAGTCTGATAATACACACTTTTGCAAGAATATGTTTAGTCATTTGGTTtt
attttcttcgatttttttgTTGATCGATGGATACAAATTACCATATCAGA
TACCTGGACCCAGATCTTTGGACGACAAAATCGCCATTGTTGGGGCGGGA
CCAGCTGGAATTCACATGGCATTACTACTGAAAGAGAAAGGTTTTGCCAA
TATTGAAATCTTGGAAAAATCAGATCGAATCGGTGGTAAATCGAACTCAA
TCCAAGATCGAGGAACTGTCCATGAACTAGGCACTGTCTATTTATCGAAA
GATTACCAGATGATTAAAGATTTAAGTGAGAAATACGTGCCAGGAGATAC
AAGTCCCTTTCCACCAGCCTCTGTTTGGTTGGATAACATGACGGCGCCGA
TACCTTTTACAACGTACGCTGGAGGTTTTGTTGCAAAAACTTTGGGCATT
ACTGACCAACAAGCAATCATGATGGAGATATTGAGAGCGTTGACGAGATA
CCAGGAATTACATCGAGAAATCTTTGGTGAATATACTGGTGAACTGATGC
CACAACCTTCCAAAGAGAACATGGAAAAAATTCGAGGGACGTTCTTAGAA
TTTATCATAAGGAACGGCCTTCAAGCACTTGTTCCGTTATTTCAAGCGTC
CACAACATTTCAAGGATACGGACATATCGATGAAGTAGCAGCTCTATATG
GATTAATGTGGAATACGCCGAATTTCATCAATGGCTTTAAAGAACGACTT
GCTGGTAAAGGCTTTGGAGATATGAACATACTGAAGTCAGGATTCCAAAA
CTTGTGGGAAACAATCGTCAACAAAGAAAACCTACGTGTCACATTCAATG
TAGATATTCTGAAGATCTATCGACCAATCACATCCGTTTATAAAACCAAC
CAACCTCTCAAAGAATCAAAATGTCGACAAGTGTGGATCGCTAAAAGGAC
TGGAAACGAGGCTTTACCCACATGGGAGAAATACAATTTCCTTATATGGA
GTCCGGAAATGAAGGATAGTCTACACCTATGGAAAGAGACCGTAGACAAG
GAAATCGACCTGTTTTCAAAGACCATGGAAAGTTATTTTACAGCATCGGT
CGTGGATACTAGAAATATGGTTCGAGGACAAACACCGATCGACTATTGGG
TGGACAATGTGGTCAAAAAACGAGATCACAGCGTATGGGCTCAAAGGGAT
TCTTACGGTGTTATTAACAGACATATGGGACCTGGTTATCAGTCAGGTAG
TCTACCCACTGGTGATGATGGTGACGAGAAACGAACAACAGTGGTCTATC
AAATGAGTCGAAATATCCCGTCCGAATcttatttgaaaaagaaactaCGC
AAACATTTTGACACTCTGAACGCTCAAGATTTGAATATTAAACAGTTTAA
AACATGGAGATACTTTCCACACTATCAACCAAAGGATATTGAGGATGGTA
TTTTGTGGAAGATATTGGAGATTCAAGGACGTTTTAACATGTGGTATATT
GGCTCGTCTGTATCATTTGAAAGCGTCAAATCTGTAGTAGAATATAATAG
CTTGATTGTTGAAAATATGGAGCCTGTAGCAAGAtaaatatacttttttt
ataagaacaaataaatttttggaactttgagccttaatttgttcttatcc
tgttcttatttataggttGTAATGGag
Run BLAST on NCBI

protein sequence of TCONS_00012610-protein

>TCONS_00012610-protein ID=TCONS_00012610-protein|Name=TCONS_00012610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MFSHLVLFSSIFLLIDGYKLPYQIPGPRSLDDKIAIVGAGPAGIHMALLL
KEKGFANIEILEKSDRIGGKSNSIQDRGTVHELGTVYLSKDYQMIKDLSE
KYVPGDTSPFPPASVWLDNMTAPIPFTTYAGGFVAKTLGITDQQAIMMEI
LRALTRYQELHREIFGEYTGELMPQPSKENMEKIRGTFLEFIIRNGLQAL
VPLFQASTTFQGYGHIDEVAALYGLMWNTPNFINGFKERLAGKGFGDMNI
LKSGFQNLWETIVNKENLRVTFNVDILKIYRPITSVYKTNQPLKESKCRQ
VWIAKRTGNEALPTWEKYNFLIWSPEMKDSLHLWKETVDKEIDLFSKTME
SYFTASVVDTRNMVRGQTPIDYWVDNVVKKRDHSVWAQRDSYGVINRHMG
PGYQSGSLPTGDDGDEKRTTVVYQMSRNIPSESYLKKKLRKHFDTLNAQD
LNIKQFKTWRYFPHYQPKDIEDGILWKILEIQGRFNMWYIGSSVSFESVK
SVVEYNSLIVENMEPVAR
Run BLAST on NCBI

transcript from alignment at sc0000146:100271..104996+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012610 ID=TCONS_00012610|Name=TCONS_00012610|organism=Clytia hemisphaerica|type=transcript|length=4726bp|location=Sequence derived from alignment at sc0000146:100271..104996+ (Clytia hemisphaerica)
GGAGAACTTCATCATACCTGATGGAACATCAGCTTGAAAGTTCTATAAAG ATTGGTTCTACAGAGATTGCATAAATATTGACGCTAAAGATTTTAGCAGT ATTATATTGAGAGAGCTATAAATGGAGGATTATTGACTCCCTGACAGCGT ACAACATTACAAATATCTTGGAAGAAAGGCACTGCTGCTGAGACATTGTC GAGTCTGATAATACACACTTTTGCAAGAATATGTTTAGTCATTTGGTTtt attttcttcgatttttttgTTGATCGATGGATACAAATTACCATATCAGA TACCTGGACCCAGATCTTTGGACGACAAAATCGCCATTGTTGGGGCGGGA CCAGCTGGAATTCACATGGCATTACTACTGAAAGAGAAAGGTTTTGCCAA TATTGAAATCTTGGAAAAATCAGATCGAATCGGTGGTAAATCGAACTCAA TCCAAGATCGAGGAACTGTCCATGAACTAGGCACTGTCTATTTATCGAAA GATTACCAGATGATTAAAGATTTAAGTGAGAAATACGTGCCAGGAGATAC AAGTCCCTTTCCACCAGCCTCTGTTTGGTTGGATAACATGACGGCGCCGA TACCTTTTACAACGTACGCTGGAGGTTTTGTTGCAAAAACTTTGGGCATT ACTGACCAACAAGCAATCATGATGGAGATATTGAGAGCGTTGACGAGATA CCAGGAATTACATCGAGAAATCTTTGGTGAATATACTGGTGAACTGATGC CACAACCTTCCAAAGAGGTTGGTTTGAATTTTTATATTCAAATTCTTAAA AGCTTTTTCTACTAACTTCACAATGTGTAGCAGGCCTGGTCGAGCTCCTT CCCTGCGGGGAAAAACTTTGCCAAGAAAATGTCTTGGTTTGGTAAGAGAA ATAGCCTGAAATTCACTTCCGAGTGGAAGTCTCAATCTCAGTGGGCAAAG CCAAGATCTTCCATCCTCGTTGGCTTTTAGCTCGACTTTATCCCTTATCT TCCTTATCTcactactcttaggtgccaaataaacaggggggttggaaaat tttcaaaattttaataaacggggggggggaaactaattgccgggggggtt ggaaattgtacttatgaaaacccaaaaataaggtaaatatagtctaaaat caggctttttggagcaaaataaggggccttcatTTTGCcaattgaaaata ttcttagaaattaataaacggggggggggtcctaataaggtccggggggt tggaaaattttcgaaaaattaacaagagGGGGGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNcggggggttggaaaattttcgaaaaattaacaagcggg ggggggggcgtttatttggcacctaagagtatgtaACCAAGACAGTAAAG CAGTGcttgaaaaaagatgaaaaattaatcCTATAATCCTTCATTCAAAT TTTATGGTGAAGAAGCCCTATAGTATTTCACAACCCAGtcattttcactt ttgtttgattttacagAACATGGAAAAAATTCGAGGGACGTTCTTAGAAT TTATCATAAGGAACGGCCTTCAAGCACTTGTTCCGTTATTTCAAGCGTCC ACAACATTTCAAGGATACGGACATATCGATGAAGTAGCAGCTCTATATGG ATTAATGTGGAATACGCCGAATTTCATCAATGGCTTTAAAGAACGACTTG CTGGTAAAGGCTTTGGAGGTATGTAGAATCTTATCTCGTACCAAAGGCCA CTTAaaacactttttgattttactaacGTCCCACGTGATACGATAGAcct ttttaaagggacataacagtacttgctaaatttgtaaacaaactgtatgc tgcggatacaaaatcaaaacaaatgtcacatgtcaaaaaaaaaatcaaac caaatatggctaattttgattgttcaattgttttacaagtttgttttgga cacgtgattttaattgttctctttaatgacacgtggttcgcgcaatgttt acattttactactttaatgtccctttaatagggaggttaagtatcaaaga taaatcaACGCGACGAACAAACGGGTTTTGACCCgcaacctgcagtaaac atgtggacctgcattttctagaatccaggctaaaacaGCTCAAGAACGAA AAACCGTGAACATCTTCGttgctgaaaaaaaaagatataacaTCTACTTT GCTACCCTTAGCATCTTGCAGAGAAAAGGCCCGTTCGTCGCgtagattta tctttgatacttaacctccctaataaCTTACGTTTACCAACATCACTTgc ttcgttttgaaattattgtcatggtgatttACTCCAAGcgggattttatt aaaactattttgtattcatttaaaaatcatttaatgtctcaagggacata atcaccatggcaattgtttgaatacgaggcaagtcaagcctgtgacgtaa tttatgaaaaggtccattcgtgagcgctatcaaaatcataaaaaaagatc TAAGAggctgggttcgagtttgtAGAATCTTAACAACTTTCGACctcatt aaaatcaattttagattttgatttgGGGGTGTGGGTAGCATTCGGGCGTA GTAGTCAAGAGTTTAATTGGAGCTCACAAAAAATGACTTCAATGTGCCAA AGAATTGatggaaaatggacaaaaatctTTTCTTATGGGTGCcaagagaa acttttttatttttgtcgcTTTTTTTCCTGAACTACAGTGGAATACGAGC AAATGTCCTCGTTCCTTCAAACAATGCCTTATATAAATTTGCAGGCCAAT CTCacacttatttctaccatatgtgtaaatatgtaaaaatcgtatatcta ccatatgtgtggatattagaatccgtaaatctaccatatgtgcaGAAATG TAAAAATCCATAAATCTACCATATTAGTAGTTAAGGTATAAATACTATCC AGACAATTtaaaaagaatgacaaataactattaaaaagcgacaaaccTAA CCATAACTATCAAAGAACCATAAATTTGTCGTCCTCTAactaatcctcac tgcaaagtattatgctattttttaaCATCCTCTCTAAATTTTCTgactga aaacaaaataatttaaatccccggtcataaaaaatacgggattatcaatc cccattgagtttcagtccgttatttttacccccactggctgaaaaaatcc taccgggtctgtgagaagggggtgttaaattctataattcgaacaaattt aaGTTCCCCGTGCGCGTTCGAGCTCGAGCTATAGAGGCTTCACAGTAGCA ctcttttaaaatttatagATATGAACATACTGAAGTCAGGATTCCAAAAC TTGTGGGAAACAATCGTCAACAAAGAAAACCTACGTGTCACATTCAATGT AGATATTCTGAAGATCTATCGACCAATCACATCCGTTTATAAAACCAACC AACCTCTCAAAGAATCAAAATGTCGACAAGTGTGGATCGCTAAAAGGACT GGAAACGAGGCTTTACCCACATGGGAGAAATACAATTTCCTTATATGGAG TCCGGAAATGAAGGATAGTCTACACCTATGGAAAGAGACCGTAGACAAGG AAATCGACCTGTTTTCAAAGACCATGGAAAGTTATTTTACAGCATCGGTC GTGGATACTAGAAATATGGTTCGAGGACAAACACCGATCGACTATTGGGT GGACAATGTGGTCAAAAAACGAGATCACAGCGTATGGGCTCAAAGGGATT CTTACGGTGTTATTAACAGACATATGGGACCTGGTTATCAGTCAGGTAGT CTACCCACTGGTGATGATGGTGACGAGAAACGAACAACAGTGGTCTATCA AATGAGTCGAAATATCCCGTCCGAATcttatttgaaaaagaaactaCGCA AACATTTTGACACTCTGAACGCTCAAGATTTGAATATTAAACAGTTTAAA ACATGGAGATACTTTCCACACTATCAACCAAAGGATATTGAGGATGGTAT TTTGTGGAAGATATTGGAGATTCAAGGACGTTTTAACATGTGGTATATTG GCTCGTCTGTATCATTTGAAAGCGTCAAATCTGTAGTAGAATATAATAGC TTGATTGTTGAAAATATGGAGCCTGTAGCAAGAtaaatatacttttttta taagaacaaataaatttttggaactttgagccttaatttgttcttatcct gttcttatttataggttGTAATGGag

Coding sequence (CDS) from alignment at sc0000146:100271..104996+

>TCONS_00012610 ID=TCONS_00012610|Name=TCONS_00012610|organism=Clytia hemisphaerica|type=CDS|length=4671bp|location=Sequence derived from alignment at sc0000146:100271..104996+ (Clytia hemisphaerica)
ATGTTTAGTCATTTGGTTttattttcttcgatttttttgTTGATCGATGG
ATACAAATTACCATATCAGATACCTGGACCCAGATCTTTGGACGACAAAA
TCGCCATTGTTGGGGCGGGACCAGCTGGAATTCACATGGCATTACTACTG
AAAGAGAAAGGTTTTGCCAATATTGAAATCTTGGAAAAATCAGATCGAAT
CGGTGGTAAATCGAACTCAATCCAAGATCGAGGAACTGTCCATGAACTAG
GCACTGTCTATTTATCGAAAGATTACCAGATGATTAAAGATTTAAGTGAG
AAATACGTGCCAGGAGATACAAGTCCCTTTCCACCAGCCTCTGTTTGGTT
GGATAACATGACGGCGCCGATACCTTTTACAACGTACGCTGGAGGTTTTG
TTGCAAAAACTTTGGGCATTACTGACCAACAAGCAATCATGATGGAGATA
TTGAGAGCGTTGACGAGATACCAGGAATTACATCGAGAAATCTTTGGTGA
ATATACTGGTGAACTGATGCCACAACCTTCCAAAGAGAACATGGAAAAAA
TTCGAGGGACGTTCTTAGAATTTATCATAAGGAACGGCCTTCAAGCACTT
GTTCCGTTATTTCAAGCGTCCACAACATTTCAAGGATACGGACATATCGA
TGAAGTAGCAGCTCTATATGGATTAATGTGGAATACGCCGAATTTCATCA
ATGGCTTTAAAGAACGACTTGCTGGTAAAGGCTTTGGAGATATGAACATA
CTGAAGTCAGGATTCCAAAACTTGTGGGAAACAATCGTCAACAAAGAAAA
CCTACGTGTCACATTCAATGTAGATATTCTGAAGATCTATCGACCAATCA
CATCCGTTTATAAAACCAACCAACCTCTCAAAGAATCAAAATGTCGACAA
GTGTGGATCGCTAAAAGGACTGGAAACGAGGCTTTACCCACATGGGAGAA
ATACAATTTCCTTATATGGAGTCCGGAAATGAAGGATAGTCTACACCTAT
GGAAAGAGACCGTAGACAAGGAAATCGACCTGTTTTCAAAGACCATGGAA
AGTTATTTTACAGCATCGGTCGTGGATACTAGAAATATGGTTCGAGGACA
AACACCGATCGACTATTGGGTGGACAATGTGGTCAAAAAACGAGATCACA
GCGTATGGGCTCAAAGGGATTCTTACGGTGTTATTAACAGACATATGGGA
CCTGGTTATCAGTCAGGTAGTCTACCCACTGGTGATGATGGTGACGAGAA
ACGAACAACAGTGGTCTATCAAATGAGTCGAAATATCCCGTCCGAATctt
atttgaaaaagaaactaCGCAAACATTTTGACACTCTGAACGCTCAAGAT
TTGAATATTAAACAGTTTAAAACATGGAGATACTTTCCACACTATCAACC
AAAGGATATTGAGGATGGTATTTTGTGGAAGATATTGGAGATTCAAGGAC
GTTTTAACATGTGGTATATTGGCTCGTCTGTATCATTTGAAAGCGTCAAA
TCTGTAGTAGAATATAATAGCTTGATTGTTGAAAATATGGAGCCTGTAGC
AAGAtaaATGTTTAGTCATTTGGTTttattttcttcgatttttttgTTGA
TCGATGGATACAAATTACCATATCAGATACCTGGACCCAGATCTTTGGAC
GACAAAATCGCCATTGTTGGGGCGGGACCAGCTGGAATTCACATGGCATT
ACTACTGAAAGAGAAAGGTTTTGCCAATATTGAAATCTTGGAAAAATCAG
ATCGAATCGGTGGTAAATCGAACTCAATCCAAGATCGAGGAACTGTCCAT
GAACTAGGCACTGTCTATTTATCGAAAGATTACCAGATGATTAAAGATTT
AAGTGAGAAATACGTGCCAGGAGATACAAGTCCCTTTCCACCAGCCTCTG
TTTGGTTGGATAACATGACGGCGCCGATACCTTTTACAACGTACGCTGGA
GGTTTTGTTGCAAAAACTTTGGGCATTACTGACCAACAAGCAATCATGAT
GGAGATATTGAGAGCGTTGACGAGATACCAGGAATTACATCGAGAAATCT
TTGGTGAATATACTGGTGAACTGATGCCACAACCTTCCAAAGAGAACATG
GAAAAAATTCGAGGGACGTTCTTAGAATTTATCATAAGGAACGGCCTTCA
AGCACTTGTTCCGTTATTTCAAGCGTCCACAACATTTCAAGGATACGGAC
ATATCGATGAAGTAGCAGCTCTATATGGATTAATGTGGAATACGCCGAAT
TTCATCAATGGCTTTAAAGAACGACTTGCTGGTAAAGGCTTTGGAGATAT
GAACATACTGAAGTCAGGATTCCAAAACTTGTGGGAAACAATCGTCAACA
AAGAAAACCTACGTGTCACATTCAATGTAGATATTCTGAAGATCTATCGA
CCAATCACATCCGTTTATAAAACCAACCAACCTCTCAAAGAATCAAAATG
TCGACAAGTGTGGATCGCTAAAAGGACTGGAAACGAGGCTTTACCCACAT
GGGAGAAATACAATTTCCTTATATGGAGTCCGGAAATGAAGGATAGTCTA
CACCTATGGAAAGAGACCGTAGACAAGGAAATCGACCTGTTTTCAAAGAC
CATGGAAAGTTATTTTACAGCATCGGTCGTGGATACTAGAAATATGGTTC
GAGGACAAACACCGATCGACTATTGGGTGGACAATGTGGTCAAAAAACGA
GATCACAGCGTATGGGCTCAAAGGGATTCTTACGGTGTTATTAACAGACA
TATGGGACCTGGTTATCAGTCAGGTAGTCTACCCACTGGTGATGATGGTG
ACGAGAAACGAACAACAGTGGTCTATCAAATGAGTCGAAATATCCCGTCC
GAATcttatttgaaaaagaaactaCGCAAACATTTTGACACTCTGAACGC
TCAAGATTTGAATATTAAACAGTTTAAAACATGGAGATACTTTCCACACT
ATCAACCAAAGGATATTGAGGATGGTATTTTGTGGAAGATATTGGAGATT
CAAGGACGTTTTAACATGTGGTATATTGGCTCGTCTGTATCATTTGAAAG
CGTCAAATCTGTAGTAGAATATAATAGCTTGATTGTTGAAAATATGGAGC
CTGTAGCAAGAtaaATGTTTAGTCATTTGGTTttattttcttcgattttt
ttgTTGATCGATGGATACAAATTACCATATCAGATACCTGGACCCAGATC
TTTGGACGACAAAATCGCCATTGTTGGGGCGGGACCAGCTGGAATTCACA
TGGCATTACTACTGAAAGAGAAAGGTTTTGCCAATATTGAAATCTTGGAA
AAATCAGATCGAATCGGTGGTAAATCGAACTCAATCCAAGATCGAGGAAC
TGTCCATGAACTAGGCACTGTCTATTTATCGAAAGATTACCAGATGATTA
AAGATTTAAGTGAGAAATACGTGCCAGGAGATACAAGTCCCTTTCCACCA
GCCTCTGTTTGGTTGGATAACATGACGGCGCCGATACCTTTTACAACGTA
CGCTGGAGGTTTTGTTGCAAAAACTTTGGGCATTACTGACCAACAAGCAA
TCATGATGGAGATATTGAGAGCGTTGACGAGATACCAGGAATTACATCGA
GAAATCTTTGGTGAATATACTGGTGAACTGATGCCACAACCTTCCAAAGA
GAACATGGAAAAAATTCGAGGGACGTTCTTAGAATTTATCATAAGGAACG
GCCTTCAAGCACTTGTTCCGTTATTTCAAGCGTCCACAACATTTCAAGGA
TACGGACATATCGATGAAGTAGCAGCTCTATATGGATTAATGTGGAATAC
GCCGAATTTCATCAATGGCTTTAAAGAACGACTTGCTGGTAAAGGCTTTG
GAGATATGAACATACTGAAGTCAGGATTCCAAAACTTGTGGGAAACAATC
GTCAACAAAGAAAACCTACGTGTCACATTCAATGTAGATATTCTGAAGAT
CTATCGACCAATCACATCCGTTTATAAAACCAACCAACCTCTCAAAGAAT
CAAAATGTCGACAAGTGTGGATCGCTAAAAGGACTGGAAACGAGGCTTTA
CCCACATGGGAGAAATACAATTTCCTTATATGGAGTCCGGAAATGAAGGA
TAGTCTACACCTATGGAAAGAGACCGTAGACAAGGAAATCGACCTGTTTT
CAAAGACCATGGAAAGTTATTTTACAGCATCGGTCGTGGATACTAGAAAT
ATGGTTCGAGGACAAACACCGATCGACTATTGGGTGGACAATGTGGTCAA
AAAACGAGATCACAGCGTATGGGCTCAAAGGGATTCTTACGGTGTTATTA
ACAGACATATGGGACCTGGTTATCAGTCAGGTAGTCTACCCACTGGTGAT
GATGGTGACGAGAAACGAACAACAGTGGTCTATCAAATGAGTCGAAATAT
CCCGTCCGAATcttatttgaaaaagaaactaCGCAAACATTTTGACACTC
TGAACGCTCAAGATTTGAATATTAAACAGTTTAAAACATGGAGATACTTT
CCACACTATCAACCAAAGGATATTGAGGATGGTATTTTGTGGAAGATATT
GGAGATTCAAGGACGTTTTAACATGTGGTATATTGGCTCGTCTGTATCAT
TTGAAAGCGTCAAATCTGTAGTAGAATATAATAGCTTGATTGTTGAAAAT
ATGGAGCCTGTAGCAAGAtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007078XLOC_007078Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012610-proteinTCONS_00012610-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012610-exon-sc0000146-1491911889:100271..101037TCONS_00012610-exon-sc0000146-1491911889:100271..101037Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1510915933:100271..101037TCONS_00012610-exon-sc0000146-1510915933:100271..101037Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1575043694:100271..101037TCONS_00012610-exon-sc0000146-1575043694:100271..101037Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1491911889:102287..102488TCONS_00012610-exon-sc0000146-1491911889:102287..102488Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1510915933:102287..102488TCONS_00012610-exon-sc0000146-1510915933:102287..102488Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1575043694:102287..102488TCONS_00012610-exon-sc0000146-1575043694:102287..102488Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1491911889:104089..104996TCONS_00012610-exon-sc0000146-1491911889:104089..104996Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1510915933:104089..104996TCONS_00012610-exon-sc0000146-1510915933:104089..104996Clytia hemisphaericaexon
TCONS_00012610-exon-sc0000146-1575043694:104089..104996TCONS_00012610-exon-sc0000146-1575043694:104089..104996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146supercontigsc0000146:100271..104996 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0240826 0 0.143416 0.203993 1.96887 2.12484 1.07541 1.75389 0.883508 0.977416 15.2491 11.5467 6.21996 3.38285 20.8529 25.1868 5.72035 3.17042 22.4978 22.2381 2.95087 3.48095 3.63097 6.27729 0.174989 0.217879 1.74696 1.37099
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012610 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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