TCONS_00012526 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012526
Unique NameTCONS_00012526
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length909

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012526 ID=TCONS_00012526|Name=TCONS_00012526|organism=Clytia hemisphaerica|type=transcript|length=909bp
acagAAACTAAAtaattaaaacataaaaaatgctGTCGACAGTCGCTCGA
AACACGCGTCGTGCACTTTCAAAACAAGCTCTGCAATCAGTACAAGTGGC
ATCAAAACACACTTTGCCAGCTCTAGATTATGAATACTCATCATTGCAAC
CAATCATCTCTGAAGAAATTATGACCCTTCATCATTCTAAACATCATCAA
ACGTACGTTAATAATTTGAACGCCGCGGAAGAACAGCTACAAGATGCTCT
GTCTCAAGGCGACTTACCAAAAGTGATAGGACTTCAACCTGCACTTCGAT
TCAACGGAGGAGGACACATCAATCACACCATCTTCTGGACCAATCTCTCA
CCCAACGGTGGAGGCGAACCCAAAGGTGATTTGTTAGCAGCGATCGTTCG
TGATTTCGGATCATTTGCAAACATGAAAGAACAATTGACGAATGCAACTG
TTGCTGTTCAAGGCTCCGGTTGGGGATGGCTGGGTTATGATAAAAAGACT
TCAATGTTGACAATCGATGCCATGGCAAACCAAGATCCTCTACAATCGAC
CAGCGGACGTATCCCGTTGCTTGGTATTGACGTTTGGGAACACGCTTATT
ACCTACAGTATAAGAACGTTCGTCAGGATTACGTCAAAGCCATCTTCGAT
ATTGTCAACTGGTCAAATGTCTCTGAACGATACGAGAACGCTATGTGATA
GTAGGAAAGAGCTTATTATACTGTCTTCATTTTCTATCATctctggaaaa
tttctttcaaatccaGCGCTGACAGGCTGAGAGATATGATTGATTGGAAC
TTTTTGTACAAAATTAAATATGGTgaatttaaatcttttttttaatttac
caATTTAAATTTCTTCATTAGAAATTTTAGAAAGAATATATTTTTAACAA
CTAGAAATT
Run BLAST on NCBI

transcript from alignment at sc0000145:338961..357821+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012526 ID=TCONS_00012526|Name=TCONS_00012526|organism=Clytia hemisphaerica|type=transcript|length=18861bp|location=Sequence derived from alignment at sc0000145:338961..357821+ (Clytia hemisphaerica)
acagAAACTAAAtaattaaaacataaaaaatgctGTCGACAGTCGCTCGA AACACGCGTCGTGCACTTTCAAAACAAGCTCTGCAATCAGTACAAGTGGC ATCAAAACACACTTTGCCAGCTCTAGATTATGAATACTCATCATTGCAAC CAATCATCTCTGAAGAAATTATGACCCTTCATCATTCTAAACATCATCAA ACGTACGTTAATAATTTGAACGCCGCGGAAGAACAGCTACAAGATGCTCT GTCTCAAGGTGAGGGATGTCATTTGATTCAACCTACAGATTATAATTTTA ACTATACACACTCATTTTTATTAGCATAAGGGGAAATCGGATCGAGGCTC ATTATGCTTAGGGATATGCTTTACAACTTtacaaatgcttttttcaagAC ATCGTAAATTTTGacagattttcattttccttttactTTTATATGATTTC GTTGTGATAGAGTATTCTTTGTCTACCTCACTGTCTCATTCTGTCTCATT GACTCtattttcgaaatttgatgaaaaaatttctcagcCTCGAGCTATGT TTTGCATTATGCTTTTTTGCAATtattattttgtgattttgagcctaagt atgtttgaaaatgtttaaaaatgcgTTATTTAGCGCAATTTAGTAAAAGG AATGAATACGTAGTGTTGGTGTTATTTCTGAGGTCGGGGGTCGTTTTTTt cgtttgtcgttctttttgccGTTTtcaatagttatttgtcgttcttttta gatggtctggaaacgttagTTGAACAATCTCTTAAGATTTATTATTAAAA TTCGATGGCCGACTTCTAAAGATAAACTTAATAAATTGATTTGTGTCACC ATTTATAGCTTGTTGAGCTAAGATTGGGTTTCCTGACGGTCACTTTATTT CATAATTAAACCAAGCTAGATAatctaagtaagtaagtttacGAATGAAG TCAACGGCGACCCAGGGCGACCCGAAGATTTGCTTTTTCTTAGGCTGTCT ACCTGAATGTGGGAAGGAAATCTACACGCTCTAATTTGAACatatattat tcgaatctttgaATGATCCGAATTAAAACATTGGTCCTCTCAACTAAAAA ATAGTGTAAAATAGTAATCTGAACTTTTTCTAGAATTCGAAGAAAGTATT TATCCCTTTAAGATcggattagagagagtcaactgtatttaaaCCATCAG TCTTGTACTTGATCTTTCATTGGTTGAGAGACatcttattttttcattca tatTATTATCATTTTTCTCTCTCACATAACGCGGCTGATAACCGAAGTAT TGATTGACGCCAAATGAGTTAAGTAAAGCTGAAATTGCAGATGACGTAaa acgataaactcggtatacattATTTTTTCAGGCGACTTACCAAAAGTGAT AGGACTTCAACCTGCACTTCGATTCAACGGAGGAGGACACATCAATCACA CCATCTTCTGGACCAATCTCTCACCCAACGGTGGAGGCGAACCCAAAGGT ATAGACACTTTTGATACATCATTGTGCTGGTCCAAATTGCTTAGCCCAAG ATTGGGTTAAACTCTTATACTAACTTTATGCCTATGATTGAAACATGATG GATTCATATATGGCTTAGCTCTGGCCTGTCTAGAGATGATGCTATTATAA TCATAGTGTCAGCCCCCCAGAAATCTAAGAAGCACCTAGACCAGGTTAGG GATTGGGGGCTAATATTTTGCAaatctttggggttacctattcattggGG TACCTAGCTGTTTTGATCGAAGCTCTGGGGNACATTATTTTTTCAGGCGA CTTACCAAAAGTGATAGGACTTCAACCTGCACTTCGATTCAACGGAGGAG GACACATCAATCACACCATCTTCTGGACCAATCTCTCACCCAACGGTGGA GGCGAACCCAAAGGTATAGACACTTTTGATACATCATTGTGCTGGTCCAA ATTGCTTAGCCCAAGATCGGGTTAAACTCTTATACTAACTTTAGTCCTAT GATTTAAACATGATAGATTCATATATGGCTTAGCTCTGGCCTATCTAGAG ATGATGCTATTATAATCATAGTGTCAGCCCCCCAGATTGCACCTAGACCA GGTTAGGGATTGGGGGCTAATATTTTGCAaatctttggggttacctattc aatGGGGTACCTAGCTGTTTTGATGGAAGCTCTGGGGACTGTGTATATTT tccatattgaatatttcaaaatatttaaaattattgaattttttaccCCA GCGCCCAGTTTCCCTTCTAATTTAGATTCTTACTTACTTCTTTCCACGtc atcttttgctatatttttcaaatgtgattgttttgatttacagccgccat cCTAATAGCATAATAACAAAGTTTTTTTCTCATGCGTGTGCGCTTCCCGC GCTAGCATAGAGAAGGTAAAACCTTATTATAAGAAagggggtacctaact caaagcaatttctcaaggggacctaactcgttgggggcgccatgcttcaa tgggggcacctgaaaagtgggctgaaaccatgataATGCTTATGAGATGA ACGAGAGAAACTCTGTATAAGACGACTGAAGAAGAATTTCGCTCAATTTA CGGTATAGGTATATATTTACAAGGTaaataattaagaaaaaaatccatga tgagaaaaataatttacaaaaattgagaaataggaaaaaatctgcgaaga aaaaaacaaaattatttataTAAAAGTTATTTACAAAATCCtaggttaat tttttttgatttttatgaaaatattaaatatacatttgataaagaataaa taaatgcGACGCTACGGCTGATGAATGAAATCAGAGAAATTGATGACCGA AATATTTGGTTCTGTATTCCTCTGCTTGTCGCctgaaaacgaaaaaaaag agggtgattaaaatgttgTACGATGAGTTTGTGTCAAGTGCCAACAACAG AAGAATGTTTTCActtcaaaacattaaaaattagTTCCAGACAGATCTTT TTGTTGAAAGGANAAATGTTTTCACTTCAAAACTCATTAAAATTAGTTCC AGACAGCTCTTTTTGTTGAAAGGATTGTCAATTTACTTGTCTTCATTACT TGAACACATTCGCGATTGACTTCTTTAACAATCAGATAAGGGGAACACGA AAGAAATATTCTATTGAAATTTACTTGCTTAcacattttgtttgtttgag cCATCACGGAGGTTGGAGGCTTCTGCAATGTCGCCTGGACCGTACTCGAA GTAATTTTGCAAGAGGTTGTAAATCCTGAAAAACGAAGAGAACGGAAGAT GACTTATATTCATTAGCTTTAGATTCAGAATGTCATCCAAACCTTGATTG CGCAATTTTTATGAATTCGGTTGGAATTCTATCACTCCTAGAACAAACAT CGAACTAAATCTTAAACGGTAAAATGCTAACTACTTCGAAACAAATTCGA CAATCAAATCTTAATTGATGAATTAGATTCGATTTAATTTGATTTGGTCT GGTGTTCGTTTCCTTTCGATTGCAATCGTGTGATAACGAATCGATTGTAC GAAGATACTTACTTTGAGTTGGGTTGAGCATAATCGATGACAGTCTTATT GTCGAGATCTTCGTAAAGAGGGTTCATCTGGTGAGCCATCAATAATTGAA GAATATCTGCTCATTGATCAATGACTGCAATATGAGCTGTGGTTCTATAA TAAAAGTCGAAGTTGAAAGAGTTAAAGGATGGGAATTGCATATTGATGCA TTTGATTCCATTTTATCTTTAAACGAATATGTCATAAGATATGAATTTGA ATGTGAACAGTGTTATCTTTTTCGCCACTTGGATATGCGATTTCCTCAAA AGCCCTGGAGAGCTATTAATGTAGGAGATTTTCTTCCAACAAAGCCAAAA CAAAGCAGATACTCGTAGAACATAATGTTGTTACAATCACTTACCGACCG TTGCCTTCTCTGGCGTTCACATCAAGTCCTTGGTGCAACATGTAATCGAT ACACTTCAGAACTACAATGTGTTTATTGTTCATCAAAGCCATATGTAGAA AGCTCATTTCACCCAATCTGCTTTCACCCTGtggagaaaattgaaatttc aataagCCTACAATTTCATTTGatcaaaaatagctaaaatcgACGAAATA GATCCAGTTTTTCATGCAGAAAATAAACAATGTTACTTTGTATTTTATCC CAAAATGCTTCTTGATGCCAAAAATACAACTTGAAGATGTTATTAAGATG TCTAGGTTCTAAGGCCTCTTAAAGGGAGAATGTGGTGTGTAAACTTACAT TTATTCTTGGTGAGACGTCCCACAAAAGTTTGAACATTTCGAAGCGTTCA TCACCATAGAAATGCAACAAAAGAGTCAAAGCATCACGAGAATCTTGTGC CTTGATACGTGTGTTAGCGCCTGCTTTGATCAACGCTTTGACGCACTCGA TGGAACCGATTTCAATTGCCTAAATAGAAGAAATTTATTCAATATGTAGT AAATATGGTTATTGTACAGCTTATTTTTGTGTTCTTGATGTTAACTGATG GTGCCAGAATCACCAAAAATAGGTTTAATATTCAATTGAATCTTCATTGA AAAACACAGCCCAAGCTCTCTGAAAAATATACCAACGTAAAAGAATTTCC CTGATGGAATTAATCCTTATtcataattttcactaaaacaaaAGCCTGTC TTAAGAAAATCTTGAAAGCTACCTAACACCGGTGACACCAGTCACTTACT TTATAGAGTGGAGTTTTGCCATGGTAGTCTTGCTTGTTGACATCGACACC AGGACATCTCAATAAGATATTTAAAGTTTTAATGCATCGCCAGGAAGCGG CGAAATGTAGTGCGGTCCTGTTAAAATGAAGATAAATACATTGATAGTCC CCATGGATGTAAAACCACTTCAAATTAGAGGTTCAAatttctctctgtaa ttcgaatctttctccaatttaaagaacattttttcatCCCCCGAAGATCG AATTAGACAGAGAGAAAGTCAATGTATAAACAATTTTCATCATCCTGGGA CGAACCAGGCGAGGAAATCTTTTGGCTTTGTTTGATGATCATAGCATAAG GCTACTCTGCTTTGTACTTTTTGTACTTTGTAGCGCTTCTAAGAACTATC TTTCATATTTTAGTCCATCGTTTTACCTCTTTTGTGCGTCAACTCTGTTG ATTTtctgttgaaatttttcttccttcAACACTTTGCGTAATTTCTTCAA TTTACCTTTCCAGGCGAATCTAAAAGTGGAATAGTAAAATGATTGAGAAT AAATCTTTATTCGTCTTTGTGTTTGAGTTTGCTTCGGTCTGTCTGTACCA GACCAACACCATATCTATACAGAAATTCTAAGGNTTCGTCTTTGTGTTTG AATTTGCTTCGGTCTGTCTGTACCAGACCAACACCATATCTATACAGAAA TTCTAAGGTTTGGCGtaagtattttttcaattttttttacagtgCTCGAT ACATATGTAGAGGGATGTCAGTAATTCTTAGTTGAAGATTTTCACCTGGC AGTTGCAGGATAAAAACGTGTCTTTTCTTCCTTACTAAGGTTTGGCGTAG AATCTTTCTCAAAAGAGACAATATAAACATAAGATtgtcaaagttttttt catcaacaaagttttttttgtataccatagtaaaaagaaattaaaagaat gatTTGTCATTCATTAACGAACATACCTCAAAATAGCGGAAAGTTCCTCC TCTTTTACTGTCCAATTAGGATAACTGCCTTCTTGAATTTTTCGTCGGAC GCGCAGCTCTTCGACGTAACGTGGTGGTACGCCGTAATCATACGCGTTAT CGATCAAGAACTTGCAATACGCGTCTGCAGACATACGGTGACCGGCACCT TCGTCAATCGTCAACGCGTTCGCGACTTCGTGACGAAATTTCTCCATCAA TTCTTCNTACACCGTAATCATACGCGTTATCGATCAAGAACTTGCAATAC GCGTCTGCAGACATACGGTGACCGGCACCTTCGTCAATCGTCAACGCGTT CGCGACTTCGTGACGAAACTTCTCCATCAATTCTTCTGTGTTCTCACGGC GTTCATCTAACGTCATTGCGGACGCTTCGTAACGTCGATGTTTCGGAACC GGAACGATTGTCCGGTTTCCAATAAATAAGCCGGTTTGTTTTTCGCGTTC GGCTTTCTTTTTCTCATGTTGTCGCCTGAGATCAGCGTCAAACCTTTTGC TCAGGTTATAGAAAGCACTTTTTCGTTCTTTGCCTGTTTTTTGTGGTACG TAGACCGTGGCTCTCTTGACGGAAGCATTGACTTGCGCTACAGCTTTATT TACTTTGTCGTTGTATGTTTCTGAATGGACAGAATATTTGATTGGAAGCT GTGGCAAAACTTCTTTTCGCTCACTCGCTTGATCTGTGAAACCAAAAAGT AACGCAAAATGTTTAGATTATGACAGTGACCTTATTAGGAGACACTTTAA ACGTTTCTGATTTAAGTTTAGATTCCactaaatttttctttgaaactaat AAATTGCAAAAACTTTAGGATATGTTATTTGAACAACACAATGAAAAGGT CTCCTCACCTTTATTTTGCTTGGCAGATTTGGCAGCTTCTCgtttctttt tcaagatttcttgaaatttatcCAATGTCTTCTGGTCTTCATCGTCCATC TCATGAAACAACTTGCAACCGTTGCTCANTCaagatttcttgaaatttat cCGATGTCTTCTGGTCTTCATCGTCCATCTCTTGAAACAACTTGCAACCG TTGTTCAATTCTCGATCCTTTACTGGTCCATGTTCATCTGAAAGTCCATG TTCTCCGAGATAATCGTTAACAATCGCACGGTAATGCTTGACACGTTCAC CAGACAAAAGTCCTGGGTCCATGATATTTGTAATACGCTCAACTTCAGTC AAACTTCGGCGAACGGAATCGAACTGCATGAAACGCATCATGGTTTTATC CAAAGCCTCCTCGCTAATGGTGGAGTCCAATTTCCTCAACTCATCCTTAA GCTCTGGAGTGCACAGCTCCAAGCATTCTTTAAACACGACTCTGGCTTTC CATTGAGCTTTAGCCTCAATTTCGACTTCTTTTAGATGTTTCAATTCAAC ATTGACTTCTGATTGAACCTCGGGTATTCCTGATGACTCAGGGTATTGCA AGGAAGATGTCTTCATTCGTTTCTCAGATGGAGTTGGTCGTAAGTGCAAT GATGTGCTTGATGCAACTTTCTTAGGTTCAAGGTCATTCATATATCTAGA GAACCTCATTTTATGATTTGATGGTACCATTGTTGGTTCTGGTGATATGT TTAAACATTCAAAGACAGTAGAGTTTGAGTACCTGAATAAATTTGGCTTA CTATCTGCCATGGCTCCGCTTGTTAGACAGTTCTCATAGAAATTAACGTT GGGTTTGATGCATTGCATGGATTTCCGTCGACCGCCGTTGAAATTGATGC GGTTCTCACGCTCTGAAGgaataaaaagaaacatgttCAGGTTTATTTTG GTCACTTTGCTGTGAAAGAATCTGAACTGATATGATTTCAAAACGTCTGA GCCGTCTTGTTCTCGACCCAGCGGAACTTCAATTCACGCTATCATGCAAA TTATTCGACAGCTTAAATGGATTTCATTCgagaaaaatagaagaaatgCT CCTATTCACTCTTTGAGATTAGGATCATGAAAATAAGAATCTATAAGAAA AGCAAAGAAATTAAACAACTTACCCATGATTTGTTCAACACGTTTCTCCA TCTCTTTTATGTGACTTTGCTTCTTGGCGTAATGTTGTTTTTCAGGTGCA TCTGTCGCTTTTGATTCAAAAGGAAGGATCTCTCTTGAATCGCCTGTTCA ACGACATCCTGCTCCTCTTGCCAAAGACCCAAGTCTTGGCACGGCaaaac aaaaacctttaaaGAGTTCCTCATTTTTATGACGAACTGatggtttttat ttaaaaaaaactaaattctcTGTTTATGCAACAGAGTCTggttgattttt gattgaattgacttcttttaatccaattaaaatatatttcactATAAATC CAACTTTAAAAAAgctcttttcaaacttttacgGCTTGGTAGGTTGGGTT TTCAAACGAAACTGAATTGAATTCATAAAAGTGGCTTTCTTtatattatt tgacgtcaataagtttttgtgacgtcaatttttgatatgTTATCAAGTTT CAtcgaatttttgtattttttcttttttttcgcgaaagtcTTTATGATCA ATACggcgaaaatctgaaaataaatatttcttgaaaatagTTTTGTCGGT TTCATAAAAGATGTTTCAGGataattttaagataagaatTTTTAGcgatt tcaataaattttgattgtaATCAATTTTTACAGAAGTTTGTGGAtaacaa aaaatcgaaaaacagCTTCATTCTGATCTTGAACTCAAAAGTATTTCATT TATTCTCTTATCTCTTGCAGGTGATTTGTTAGCAGCGATCGTTCGTGATT TCGGATCATTTGCAAACATGAAAGAACAATTGACGAATGCAACTGTTGCT GTTCAAGGCTCCGGTTGGGGATGGCTGGTAAGTGGTGGGTAACTAGTTTT TGCGCGAACAATTCTTCGCTTTTTTCGTTTTGTTATAAAATCACGTAAAT TTAAACCCGTGAAGCACAATGTACCGCGTATAATATTAATATATcttatt ggccctttttacgccggcccttatttaACGCGGGCCCCTTTTACGcgggc cctttttacgccacagtctaattttgggcttaggccaTTTAAggccgtta ataacgccaaaacttgtaaaaatggctacttatacttcaaattagtaaat aatgCTTAAAGGTTTTGGTAGTAAATTGTTGAAAATCCCATTCAAAATTA CTGATTTTCGTGAGGTCTTAGATATGGATAATTTTtatcttcgaatcata cctaaaatccctTAAATTGAGAAATGATGATAGAAAATTAACGCcacttt taggtaaaaattgtaaaatctcggcccttattacgccacgtgcccaaaaa taacgccaataaaggggcggcgtaaaaagggccgataaggtaagtcTTTG AGAACGAGGTTTGCAATTATTTTATGCATTTCCGAAAATTGCTTTCCTTA AAAATTGGGGagagggtggaggatataacagttttcagtgatttaccccc cggacaaagtgacttttggccccccgtacaattttgatgattttcctacc acctggacaatatatcctccacccccccccccatgtacggaaGAGCCCAT TTCGTCAGTTTTGTTATTAAAATATTAGTCTGGCCATCTCTTTGTAACAC TTCTTTCCTCGCCAACTGACAGGGTTATGATAAAAAGACTTCGATGTTAA CAATCGATGCCATGGCAAACCAAGACCCTCTACAATCGACCACCGGTAAG GAAAATGCATTAGTATCTTTTACAGACATTCATAAATTTAagtatttgta aagttttaagcaAAATGAGACTTAATTTTCCAGCTTTATTATACttggct acgtcatatcttccttcgtttccagcgtaaaactcctactcgggtaaggc ctaaaagccttgAGCTGTATATTATGTAGACTATATTATCCCTGAAAAtt actgaaataaaaattatgatagAAAATGATGCATGCTAAAACTACTTTAA ACAGGCCATCCAAGAAAATCAATGACATTAAATTAACCATTGTTAACCCT TAGTGTCAAATCGCCACAgcccagatgagatggagtttttataagatact ttaataattggtcatttgaagtaataaaaatgacgcattCTTTAGGAAAa gttgttttattactggttaacgaccaaccaaatcaaataagagcttgtaa aaactccatctcgtccccaaGAGCCAGGCTACCGACCTATGTATTGTCTT TCATTCCGTTTCTTTATTTCAGGACGTATCCCGTTGCTTGGTATTGACGT TTGGGAACACGCCTATTACCTACAGTATAAGAACGTTCGTCCTGATTACG TCAAAGCCATCTTCGATATTGTCAACTGGTCTAATGTATCTGAACGATAC GAGAACGCTATGTGATTGTAGGAAAGAACTTAAATTACTGTTTTCATTTC CTGGCTGGATTGAATGAGCAGGTCCAGGGTAATctcttcagaaaattttg aaaatccaggtctggatcaatttttgtaaaaaactaaaTATGATGAattt aactctttttttttaatttacgaattaaaatttcttcattagaaATTTTA GAAAGAATACATTTTTAACAACTAGATATGTCAAAATATATTTAGGTTAC TCTCTCCCCACCCATTGTCTGAACAAATACCAATACAAAGAAATGCTGCA TTGAATTATCTTTCAGATTACAATTCGGTTGAGACCTCTATGCAAACTGT TTGTCAATCTATGACTTGTGACGTAGAGCAAGCCTAGCCCCGTTAATGAA ACAATGTTTTTGGTAACATGACTTATTATCATACTTTCTTTTAGTTTATG CTATCTGGTCTTTACAGGGAAGTCTTTCTGATTCTGATATTACTAATATG TTGCTCTAATAtattataaaatgtttttattttgtagagACTTAAtaatt aaaacataaaaatgcTATCGACAGTCGCCCGAAACACGCGTGGtgcactt tcaaaacaaactctGCAAACAGTGCAAGTTGCATCAAAACACACTTTACC AGGTCTCGATTATGAATACTCGTCATTGGAACCAATCATCTCtgaagaat ttatgacccttcaTCATTcgaaaaacatcatcaaacgTACGTCAATAATT TGAACGCCGCGGAAGAACAATTAGAAGATGCTCTGTCTAAAGGTGAGGAA TGTCATTTAATCTAACTCACAGATTCTACTTCAAGATTTTCCTTAAATTC AACCTGTACTAGACCGATTGGGTCAattctttctgtaattcgaattagGC CCCCTTGGCTTAAAAGTGGTATAATAAATACTCTCTATTCCGAATCTTTC TATTATGCAATAGAAGTGGCCCCTTTAAGATGGAATTATAGAAATAGGTA TTTAAATCATCTTTTACTtgaactttttcattgattgatTGGCATCTTAT TTCTTCAGCCGACTTCAACCAGCACTTCGATTCAACGGAGGAGGCCACGT CAATCACACTATCTTCTAGACCAATCTCTCACCCAACGGTGGAGGCGAAC CCGAAGGTAAAGACACTCCTTATATGTCGGCCAGATTGGTTATTCCGAGA TTAGGTTCTTTAATTTCTACCTGATTTGCGAAAATAATTCTACGCGAAAA TCTATCCACTTAAGGTTATCTGAAACTAACTGTCCTATGATTTAAACCTG ATTTAAAACGTGGTCGATTTATATATATCTGGCCTATCCAAAGATAAAGG AGAAAAGACGGATATGAGACGAGTGAAGaagaattttaataaatttacgg TATAGGTATATATTTACATGGTAAATAATTAAGAACAAAATCCAcgatga gaaaaataatttacaaacattggaaaatgaggaaaaaatctgcgaagaaa aaacaaaattatttataaaaaagctattacaaAATCCTaggttaaaattt ttgatttttatgaaaatattaaaaaaacgtttgataaaaaatttataaat atataGACACAACGGCTGATGAATGGAATCAGAGAAATCTATGTCCGAAA TATTTGGTTCGGTATGCTTCTGCTTGTCggctgaaaacgaaagaaaagaa agaccaaCGATTAAAATATTGTACAATGAGTCAAGTGCCTACAAAAATGA AAACGTcctcaattattttcaaaacttttgagtCTTGTCTCAGATAAATT TGCTGTTTACTGTATTGAAGGCATTACCAGTTTAATTTTACTTGTCCATC ATCACATAGACACATTCTTGATTGACCACTTAACCAATCAGGTCTAATTA ATTAATAATGGAAACACAGAGAAAGAAAGATTCTATGAAATCTACTTGCT TACATGTTGTGTTTGTTTGAGCCATCACGAAGGTTGGATGCTTCTGCAAT GTCACCTGGACCATACTCGAAGTAATTTTGCAAAACGttgtaaattctga aaaacgaagaaaatgaagaaatgagTTATGATCATTCGTTTTGAATTCAG AATGTAACTCACTTGAAGGTTTGATGAATCTTGGAACAAATCCCGGACAA AATCGAAATGGTGAAGTGACAGCTACTTCGATTCAAATTCGACGACCAAT TATTTTCCATTGAATTCGACCGGTCTGTCTTATTTTCCTTGCAATGGCGA CCGTGTGATAAAGAATCGATTGCACGAAGATACTTACTTTGAGTCGGGTT GAGCATAATCGATTACAGTCTTATTGTCAAGATCTTTGTAAAGAGGGTTC ATCTGGTGAGCCATCAATAATTGAAGAATATCTGCTCGTCCATCAATGAC TGCAATATGAGCTGCGGTTCTATAAGTTGAAGTTGAAAGAGTTAAAGCAT GGGAATTGCGTATTGATACATTTATTCCATTTTGTCTTTAAACGAATATG TCATAAGATATGAATTTGAATGTGAGCAATGTTATCTTTTCCGCCACTTG GACATGAGATTTCCTCATGTNATAGTGATACATTTTATTCCATTTTGTCT TTAAACGAATATGTCATAAGACTTGAATTTGAATGTTAAGAATGTTATCT TTTTCGCCACTTGGATATGCGATTTCCTCAAAAGCCCTGGAGAGCTATCA ATGTAGGTGATTTTCTTCCAACTTAAGCCAAAACAAAGCAGATAATATAA GTAGAAAATAATGTTGTTGCAATCACTTACCGCCCGTTGCCTTCTCTGGC GTTCACATCGAGTCCTTGGTGCAACATGTAATCGATACACTTCAGAACAA CGATGTGTTTATTGTTCATCAAAGCCATATGTAGAAAGCTCATTTCACCC AATCTGCTTTCAGCCTGTGAAGAAAATTGgatattgaaatttcaatttca agtcaACATACTATTCCATTACATTAAAAATAGCTAAGATTAGAGCCTAG AAGACGAAATGGGAACAAATCTTTCTGTAGTGTTATAAGCAGATTTTGAA CAATGTTAAGTGGAAGAAATTTGCCTCAATGCCTCTTGGTGATAAACATG TATATCGAATATGTCATTACGATTCAATCGAGGACCTAGGCCTCTTAAAG GGAGAGTGCGGTATGTAACTTACGTTTGTTCTCGGTGAGACGTCCCACAA AAGTTTGAACATCTCGAAGTGTTCATCACCATAGAAATGCAATAAGTGAG TTAAAGCATCACGAGAATCTTGTGCCTTGATACGTGTGTTAGCGCCTGCT TTGATCAACGCTTTGACGCACTCGATGGAACCGATTTCCATGGCCTAAAT AGAAGAAATTTATTCATATGTAGTAAATATGGTTATTGTACAATTTATTT TTGAGTTATTGATGTTGATTACGCCCTAGAACCACCGAAAAGAGGTTTGG TAACATATGATCAATCAAATCTCCATTGAAAACATAGCTCGAAATCCCCG AACGAATATGTTAAAAAGAATGTCCCTAATGGAATTAATCTTTCTTCatg attttcactaaaacaaaaagttgtcttaagaaaatctttaaagttACTCG GTTTTAACTTAAATGAATAGTCACTTACTTTATAGAGTGGAGTTTTGCCA TGGTAGTCTTGCTTGTTGACATCGACACCAGGACATCTCAATAAGATATT CAAAGTTTTAATGCATCCCCAAGAAGCGGCGAAGTGCAGGGCGGTTCTGT TAAagtgaagagaaaaatattgaaagataTAGTCCCCATGGATATATAAA CACTTCAAATTAGAGTGTGAATACGAAAAATAATAGAAGACGTGTCCAAA AGTTTAAGTTTCTCCGTGTGAGTATTCCTGGAAAAGGAAACACAGTCAAC TCTCTTTGTTTTGAACCTCtgtttttcgaatctttctctgatTCGAAGCA AACTGTATAAACAATTTTCATCAGTCTAGACGAACCAGGCGAGGAAATCT TTTTGGCTTTGTTTGATGATCATAGCATAAGGCTACTCTGTTTTCTACTT TTTGTACTTTGTAACCCTTCTAGTTTACTCGTCAAATTCTTAGAACTATC TTTCATATTTTAGTCCATCATTTTACCTCTTTTGTGCGTCAACTCTGTTG ATTTTCTGTTGAAATTTCTCTTCCTTCAACACTTTGCGTAATTTCTTCAA TTTACCTTTCCAGGCGAATCTAAAAGTGGAATAGTAAAATGATTGAGAAT AAATCTTTATTCGTCTTTGTGTTTGAGTTTGCTTCGGTCTGTCTGTACCA GACCAACACCATATCTATACAGAAATTCTAAGGTTTAGcgtaagtatttt tttaatttttttttacagtgCTCGATACATATGTAGAGGGATGTCAGTAA TTCTTAGTTGCAGATTGTCACCTGGCGGTTGCAGGATAAAAACGTGTCTT TTCTTCCTTACTAAGGTTTGGCGTAgaatctttttcaaaagaaccaaTAT AAACATAAGATTGTCAAAGTTTAGTCAAAATTTACTTTCATcaacaaagt tttttttgtataccatagtaaaaagaaattaaaagaatgatTTGTCATTC ATTAACGAACATACCTCAAAATAGCGGAAAGTTCCTCCTCTTTTACTGTC CAATTAGGATAACTGCCTTCTTGAATTTTTCGTCGGACGCGCAGCTCTTC GACGTAACGTGGTGTTACGCCGTAATCATACGCGTTATCGATCAAGAACT TGCAATACGCGTCTGCAGACATACGGTGACCGGCACCTTCGTCAATCGTC AACGCGTTCGCGACTTCGTGACGAAACTTCTCCATCAATTCTTCTGTGTT CTCACGGCGTTCATCTAACGTCATTGCGGACGCTTCGTAACGTCGATGTT TCGGAACCGGAACGATTGTCCGGTTTCCAATAAATAAGCCGGTTTGTTTT TCGCGTTCGGCTTTCTTTTTCTCATGTTGTCGCCTGAGATCAGCGTCAAA CCTTTTGCTCAGGTTATAGAAAGCACTTTTTCGTTCTTTGCCTGTTTTTT GTGGTACGTAGACCGTGGCTCTCTTGACGGAAGCATTGACTTGCGCTACA GCTTTATTTACTTTGTCGTTGTATGTTTCTGGATGGACAGAATATTTGAT TGGAAGCTGTGGCAAAACTTCTTTTCGCTCACTCGCTTGATCTGTGAAAC CAAAAAGTAACGCAAAATGTTTAGATTATCATTGACAGTGACCTTATTAG GAGACACTTTAAACGTTTCTGATTTAAGTTTAGATTCCactaaatttttc tttgaaactaatAAATTGCGAAACTTTAGGATATGTTATTTGAACAACAC AATGAAAAGGTCTCCTCACCTTTATTTTGCTTGGCAGATTTGGCAGCTTC TCgtttctttttcaagatttcttgaaatttatcCAATGTCTTCTGGTCTT CATCGTCCATCTCATGAAACAACTTGCAACCGTTGCTCAATTCTCGATCC TTTACTGGTCCATGTTCATCTGAAAGTCCATGTTCTCTGAGATAATCGTT AACAATCGCACGGTAATGCTTGACACGTTCACCAGACAAAAGTCCTGGGT CCATGATATTTGTAATACGCTCAACTTCAGTCAAACTTCGGCGAACGGAA TCGAACTGCATGAAACGCATCATGGTTTTATCCAAAGCCTCCTCGCTAAT GGTGGAGTCCAATTTCCTCAACTCATCCTTAAGCTCTGGAGTGCACAGCT CCAAGCATTCTTTAAACACGACTCTGGCTTTCCATTGAGCTTTAGCCTCA ATTTCGACTTCTTTTAGATGTTTCAATTCAACATTGACTTCTGATTGAAC CTCGGGTATTCCTGATGACTCAGGGTATTGCAAGGAAGATGTCTTCATTC GTTTCTCAGATGGAGTTGGTCGTAAGTGCAATGATGTGCTTGATGCAACT TTCTTAGGTTCAAGGTCATTCATATATCTAGAGAACCTCATTTTATGATT TGATGGTACCATTGTTGGTTCTTGTGATATGTTTAAATATTCAAAGACAG TAGAGTTTGAGTATCTGGATAAATTTGGCTTACTATCTGCCATGGCTCCG CTTGTTAGACAGTTCTCATAGAAATTAACGTTGGGTTTGATGCATTGCAT AGATTTCCGTCGACCGCCGTTCAAATTAATGCGGTTCTCACGCTCTATGG AAATAATATTAAAGCATAATCAAGTTTATTTTGGTCACTTTGCTGTGAAA GAATCTGAACTGATGTTATTTCAAGACGTCTGAGCCGTCTTGTTCTCGAC CCAACGGAACTTGGGAAATCATGCAAATTATTCGACAGCGTAAATGGATT TCATTCGAGAAAAATAGCTCCTATTCACTCTTTAAGGTTGGGATCCAGAA AACAAGAATCTATAAGAAAAGCAAAGAAATTAAACAACTTACCCATGATT TGTTCAACACGTTTCTCCATCTCTTTTACGCGACTTTGCTTCTTAGCGTA ATGTTGTTTTTCAGGCGCCTTAAAGCAGCTTTGCCACTCTCCCTTCTCTT GCTTTTGATTCAAAAGGAAGGATCTCTCTTGAATCACCTGTTCAACGACA TCCCGCTCCTCTTGCCAAAGACCCAAGTCTTGGCACGGCaaaacaaaaac ctttaaaGAGTTCCTCATTTCTATGACGAACTGatggtttttattttgaa aaatctaaattctcTGTTCCTGCAACAGAGTCTGATTGATTTTTAATTGA ATTGACTTCTTTTAATCcaattaaaatatatttcactATAAATCCAACTT TAAAAAAGCtcctttcaaactttttgcGGCTTGATAGGTTGGGTTTTCGA ACGAAACTGGATTGAATTCATAAAAGTCGCATTCTTtatattatttgacg tcaataagtttttgtgacgtcaatttttgatatCTTAAATCAATTTCATc gaattttggtattttcatATCGCGAAAGTAAGTCTTTATTGATCAATACG GCGAAAGtctgaaaaaattatttcttgaaaatagttttataaaagatatt tcaggataattttaagataagaattttaagcgatttcaatagattttgat tgtAATCAATTTTTACAGAAGTTGGTGGAcaacaaaaaatcgaaaaacag CTTCATTCCGATCTTGAACTCAAAAGTATTTCATTTATTCTCTTATCTCT TGCAGGTGATTTGTTAGCAGCGATCGTTCGTGATTTCGGATCATTTGCAA ACATGAAAGAACAATTGACGAATGCAACTGTTGCTGTTCAAGGCTCCGGT TGGGGATGGCTTGTAAGTGGTGGATAACTAGAAGAAATCTTCGCTTTTTT CGTTTTGTTAAAAAATCACGTAAATTAAAACCCGTGAAGCACAATGTCTC GCGtataatatttctaaaaatcttaggaatgaaaaatgtcaaatacaCAC TTCTCCAGATAAATCAACAGCATTGCGGGCCTCGTTTCTAAATCAAATGA TTGCTTCAAACGACATTTACACACGTAATATGTTAATATGTTTTCCCAAA AGACCGTGGATTTTGATATAAAACCGTAAAACTAAATATTGCAAACATTA TGTCTGGCGACTGAAGTATCGTAGCAATATAAAGTCATTTAAAACGAGGT TTGCAATTATTTTATACGCATTTTCGAGAAAAGTGTATTtacgaaaatca gcgaaaattttattgatgttttatcaaaatattggttTGGCCCCCTCTTT TATAACACTCGCTATTCGTCTATAACACACTTTCATAACACTCGTCTATT AGATTTGAGTTAGGAAATGTGTTATATTGTTTTCTCCTTGACCAGAAACA AGAAGTAGGTTGGATTAAGGAAaggttcgaataatagaattaGAGAGCCA CTGTATTGAACAATTTCTTTACCAACCAACAGGGTTATGATAAAAAGACT TCAATGTTGACAATCGATGCCATGGCAAACCAAGATCCTCTACAATCGAC CAGCGGTAAGAAAAATGCATTAGTATCTTTTATACAGACAAGCATAAATT TAagtttttgtaaagttttaggtAAAATGAGACTTAATTTTCTGGCTTTA TTATCCCTGAAAATTACTGAAATAAAGATTATGATAGAAAAGGATGCTAA AACTACCTTAACAGGCCATTCAAGAAATTTAATGACATTAGATTAACCAT TGTAAACCCTTAGTGTCAAATAGCCAGAgcccagatgagatggagttttt ataagatttcttaataattggtcatttgaagtaaataaaaatgacgcgtt ctttagaaaaaggcTACCGACCAAAGTATTGTCTTTCATTCCGTTTCTTT ATTTCAGGACGTATCCCGTTGCTTGGTATTGACGTTTGGGAACACGCTTA TTACCTACAGTATAAGAACGTTCGTCAGGATTACGTCAAAGCCATCTTCG ATATTGTCAACTGGTCAAATGTCTCTGAACGATACGAGAACGCTATGTGA TAGTAGGAAAGAGCTTATTATACTGTCTTCATTTTCTATCATctctggaa aatttctttcaaatccaGCGCTGACAGGCTGAGAGATATGATTGATTGGA ACTTTTTGTACAAAATTAAATATGGTgaatttaaatcttttttttaattt accaATTTAAATTTCTTCATTAGAAATTTTAGAAAGAATATATTTTTAAC AACTAGAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007033XLOC_007033Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012526-exon-sc0000145-1491911889:338961..339218TCONS_00012526-exon-sc0000145-1491911889:338961..339218Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:338961..339218TCONS_00012526-exon-sc0000145-1510915933:338961..339218Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:338961..339218TCONS_00012526-exon-sc0000145-1575043694:338961..339218Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1491911889:340342..340400TCONS_00012526-exon-sc0000145-1491911889:340342..340400Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:340342..340400TCONS_00012526-exon-sc0000145-1510915933:340342..340400Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:340342..340400TCONS_00012526-exon-sc0000145-1575043694:340342..340400Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1491911889:340816..340873TCONS_00012526-exon-sc0000145-1491911889:340816..340873Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:340816..340873TCONS_00012526-exon-sc0000145-1510915933:340816..340873Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:340816..340873TCONS_00012526-exon-sc0000145-1575043694:340816..340873Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1491911889:347481..347587TCONS_00012526-exon-sc0000145-1491911889:347481..347587Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:347481..347587TCONS_00012526-exon-sc0000145-1510915933:347481..347587Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:347481..347587TCONS_00012526-exon-sc0000145-1575043694:347481..347587Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1491911889:357043..357115TCONS_00012526-exon-sc0000145-1491911889:357043..357115Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:357043..357115TCONS_00012526-exon-sc0000145-1510915933:357043..357115Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:357043..357115TCONS_00012526-exon-sc0000145-1575043694:357043..357115Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1491911889:357468..357821TCONS_00012526-exon-sc0000145-1491911889:357468..357821Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1510915933:357468..357821TCONS_00012526-exon-sc0000145-1510915933:357468..357821Clytia hemisphaericaexon
TCONS_00012526-exon-sc0000145-1575043694:357468..357821TCONS_00012526-exon-sc0000145-1575043694:357468..357821Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:338961..357821 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.6342 33.4319 29.7199 26.6745 0.1466 0.71443 0.632514 0.0630949 15.3171 16.6824 13.383 12.2332 7.20675 6.13649 12.3431 14.7706 20.0878 19.1116 3.24786 4.90445 16.675 8.3389 20.5051 14.6279 0.00296467 0.471136 13.7503 12.1237 15.0257 14.9115
Blast
BLAST of TCONS_00012526 vs. Swiss-Prot (Human)
Match: SODM (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 8.344e-102
Identity = 142/218 (65.14%), Postives = 170/218 (77.98%), Query Frame = 3
Query:   30 MLSTVARNTRRALSKQALQSVQVASKHTLPALDYEYSSLQPIISEEIMTLHHSKHHQTYVNNLNAAEEQLQDALSQGDLPKVIGLQPALRFNGGGHINHTIFWTNLSPNGGGEPKGDLLAAIVRDFGSFANMKEQLTNATVAVQGSGWGWLGYDKKTSMLTIDAMANQDPLQSTSGRIPLLGIDVWEHAYYLQYKNVRQDYVKAIFDIVNWSNVSERY 683
            MLS     T R L+  AL  +    KH+LP L Y+Y +L+P I+ +IM LHHSKHH  YVNNLN  EE+ Q+AL++GD+   I LQPAL+FNGGGHINH+IFWTNLSPNGGGEPKG+LL AI RDFGSF   KE+LT A+V VQGSGWGWLG++K+   L I A  NQDPLQ T+G IPLLGIDVWEHAYYLQYKNVR DY+KAI++++NW NV+ERY
Sbjct:    1 MLSRAVCGTSRQLAP-ALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217          
The following BLAST results are available for this feature:
BLAST of TCONS_00012526 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SODM8.344e-10265.14Superoxide dismutase [Mn], mitochondrial OS=Homo s... [more]
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