TCONS_00012418 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00012418
Unique Name	TCONS_00012418
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2156

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000144:295688..304760+

transcript sequence

>TCONS_00012418 ID=TCONS_00012418|Name=TCONS_00012418|organism=Clytia hemisphaerica|type=transcript|length=2156bp
GTAATGACGTCCAAAAAAAGATTGCCGGATCAAAAACAATACCGCGTAGG
AGTGCTCAAACCCTGTTGGGAATACCATATAATTGCTTGGAATGTACTCC
GTGGCGGAGATGTTTTGATGTTAGGAGACATCTAACTCGAAGGTTATCAA
TGCCATCAATAATTCATCTCGAGAAAAGAAGGGGTTTAAGACAGCAAGCT
TGCTATTATACTTTTTACTAGCTGATATCGGATATCTCAAAGTTGAggga
aaacaaaaagattttgcAATACTttccgaaaatcttttttgagatCTGCT
TACACACTCTTGTTTAAGGTAACATACTTTCGGACGACACGACGTTGTGC
AGACGACAGCTAGACAGAACTTTCACCGATATTTGACGACCAAATACAAC
AACCATGGCTCTTTTCCTCAGAAAACACACAGGAACTCCTTTCAAACATG
CACAAGTATTATCCCGATCATTTGCAGTTCGTGGTGTTGAAATGCCTTCA
ACTGATTTCCAACCGGCTGAATTCAAGGGAATGCCATACGATGAAGCACG
TGCTGCACACGCCAAAAACCTTTTCCCTCATGTCTCCGAACGTATGTTGT
TATACAAAAGACCTGTCTATCTCACTCAGGGTCATATGCAATGGTTGTGG
GATAGTGAAGGCAAACGATATTTAGATTTATTTGCTGGCATTGCTACTTG
TGGTGTTGGACACTGTCACCCGAAAATTACAGAATCGATTCAAGATCAAG
CATCAAAATTGGTGCATTGCTCAAACTTGTACATCAATGCTAAACAAGCG
GAATATGCTGAAAAATTGTTGACAAAATTGCCCGAAAAATATAACCGTGT
ATACTTTGTGAACAGTGGATCAGAAGCGAATGATTTCGCTATGACCATGA
TGAGAGTTTACACTGGAAGCTGGGATATCATCGGATTGAGAAACGCTTAC
CACGGAGCCAGTCCCACCACTCTTGGCATCACCAACATGGGTCAATACAA
ATTCCCAACTCCACAAAACTTTGGTTGTCACACTattcCAAACCCAGATG
TTTACAAAGGAATTTGGGGCGGAAAGAATTGCCGCGATTCTCCCGTTCAA
GCTGACAGAGATTGTGATTGTGCTGAAGGAGTATGTGAGGCCACAGACCT
TTACCTCGGTCAATTGGAAGATGTGTTGACCAATGTCACACCTCCAAAAG
TTGCCGGATTCTTTGGTGAACCCATCCAGGGTGTCGGTGGTAGCGTTCAA
TACCCACGTGACTTTTTACAAAAGACCTACGAGAAGATTCACGCACGTGG
TGGACTTTGTGTGGCTGATGAGGTTCAAACAGGTTTCGGACGTACTGGTT
CACATTATTGGGGATTCCAAGGTTCTGGACTCAACCCTGACATCATCGTG
TGCGCCAAGACCATCGCTAACGGATTACCAATGGCTTGCGTTAtcacaac
aaaagaaattgcTGACTCAATGAACGTTGCTCTTCCATTCAACACCTACT
CCTCAAATCCAGTCTCTTGCGCCGCTGCTATCACCGCTCTCGATGTTATC
GACGAAGAAGGTTTACAAGAGAACTGTCAACGTGTTGGAACATATTGTTT
GGAAGAACTATCGAAGATCCGTGATGATTACGAGATTGTCGGGGATGTCC
GTGGTAAAGGATTGATGATCGGTATCGAAATGGTCGCCGATAAAAAGACG
AGAGCACCATTGCAACCAGAGAGAGTTGGAGATATCATCGAACGAACGAA
AGATTACGGAGTCTTGTTTGGTAAAGGTGGACGATTTGGACAGGTTCTTC
GTATCAAACCACCAATGAACGTCACTAAAGAAGACATTGATTTCGGACTT
GCTGTTCTCAGACAATCTATCGAAGAACATCTCGCTCAATAGAAGGCGAT
GTTGTGAAACATACCAACGTTGAACATACAATATCAATGCAGGGTTCACA
AGAAGACGAGACTATTGTGTATTCTGGTTAGATATACATCGTCCCAGTAA
TTTTCGATGGAGCCTTGTCCTTATTGAAGAGCGTCATTGAAAATTCATGG
ACCGTACTGCTGTTCCACAggcaaaaaataaacaaagggAAGCATTATTC
AGCACAGTTAAgtttataattttaaatcacCACGCCATTCCAAAAAtgct
cattta

Run BLAST on NCBI

transcript from alignment at sc0000144:295688..304760+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00012418 ID=TCONS_00012418|Name=TCONS_00012418|organism=Clytia hemisphaerica|type=transcript|length=9073bp|location=Sequence derived from alignment at sc0000144:295688..304760+ (Clytia hemisphaerica)
GTAATGACGTCCAAAAAAAGATTGCCGGATCAAAAACAATACCGCGTAGG
AGTGCTCAAACCCTGTTGGGAATACCATATAATTGCTTGGAATGTACTCC
GTGGCGGAGATGTTTTGATGTTAGGAGACATCTAACTCGAAGGTTATCAA
TGCCATCAATAATTCATCTCGAGAAAAGAAGGGGTTTAAGACAGCAAGCT
TGCTATTATACTTTTTACTAGCTGATATCGGATATCTCAAAGTTGAggga
aaacaaaaagattttgcAATACTttccgaaaatcttttttgagatCTGCT
TACACACTCTTGTTTAAGGTAACATACTTTCGGACGACACGACGTTGTGC
AGACGACAGCTAGACAGAACTTTCACCGATATTTGACGACCAAATACAAC
AACCATGGCTCTTTTCCTCAGAAAACACACAGGTATATTCCGCTTTTCAC
TATTTTAGTTCGAGAAAGGTTGGTGGGATGGGAATATTTGGGTTTTAAGC
CAGGCTGgctcttttgaaatatttctgtTGCTTTGAGTTTTGATGTAATA
CTGTACAGTTTTGAGTTGTAGCTGCATATGGTAATACACTTAAAATTTTC
CttcttctaaaattttcataGGAACTCCTTTCAAACATGCACAAGTATTA
TCCCGATCATTTGCAGTTCGTGGTGTTGAAATGCCTTCAACTGATTTCCA
ACCGGCTGAATTCAAGGTATCATTTTACTGTATGTTTGTCTTCAATAAAG
GTTTCTGTCTTGGTAGATTCGAAGTGTATGTTATATTTGCAAtagtttga
aaatttgtgtCTAGTAGGTCTCGCTTGTGTTCTTTCAACcgtatttttct
tcaaaacttttgTAAATTTCTGTTATATCATTGCGAACATGAAGTAATTA
GATAGACGGGAGTAATGGAGCTATGGAAAAGCAAATTTTGCTGAGTCATT
ATGTCAAatgatttgcataatttttcatacattcaacttattattttttt
gttatcaACTCAATTATTTTCTTTACTGCTAAATCACAAAACGCTTATCT
AATCATGGTATCTTTTCACGGCTTTCACGGCAAATCCTACTCGTACTATA
ACAACACAAAAACTTCATATCGAAActcaaacatttcaaaattttactag
TAGAAAAACAAAGTGCTGANAATCCTACTCGTACTATAACAACACAAAAA
CTTCATATCGAAActcaaacatttcaaaattttactagTAGAAAAACAAA
GTGCTGACCGCAATAGAGAAAACATTCCTAGTTATTTTTTGCTTGACTAA
TAAGAACTGCTATTTACACAAGCAACGATTCCCTTTTTTGGATAATCGAG
GATTAAGCAATAAAGGAAGGATGGGGCTGGCCTGCATGTGGCAAACGATC
TAGGCGGAAAATGACCACCATCATACCCTTGACTTTTTACCCTTGACAGT
AAATTTGACAATTTACTGATTGAAATATTCCAGTCATATGTAATCATTTT
GAAGCTTAAAAATCATGCGCTCACGATTATTTGTTTCAAAATCATGTAAC
TATGGTTCTCCTGGGGACATACACGCTGACGCTCGCTAATTTGGACTTGG
ACGCACGGCGAGAATCTTATTTCCTCGAATTACAAAGAGATTCGAATTGT
AGAAAGCATTTTAGAAGGGTTTTTCTTTGCCAGGGACTGCAaataagttc
gaataagcgaaagTCTACTGTActtcaaaaaggttttttcctccagaaaa
tatgaaatacaTAGATAGGCTGAAGTATTTTTCTAATGAGTATGAAAATC
TTACGTCAGCTGCTGTGTTCAGGTGACCTCCTTAGAAAGGGTCAGCAGAA
AATTTCCTCTAGTAAAAATACTGAGtgtccaattttccattgttcgGTGG
GCTATGCAATATTTACTTTAAAGACGTGATTGCGAATTTCGAGGAGAAAT
TTGATATGGGTCAGAACTCTGTTTGTCAACTGCTTTTAGAAAAGTACATG
AAGTTTGTTGACAAGTCATATTCATATGCTGATAAGCCAAAATACAAAAA
GGAGTACTCGAGATATCCCGATTAAAACCTTAAGATTACAGATCGCCGAT
GAGATTGCCAGAATCTTGAAATTCTTTCTTCAAGGGCAAtgaaatctttt
tctcaaaactttatttttagctCTACTAtattttaccttccaaaaaatTA
CGATGCAAAGAATAATTgtccttgaaaatttgaaatattcctCTTCGTAA
AGTTTCATTCAATTCTTTATACAATTTTGAACGCTTTTTTAAGTGGTCAA
TTCAATCCTTGGTACTGTAGGCTTTAATACTTAACGAATCCCTAATCGAA
TATGATTCCTTGAACTATTTCAGGGAATGCCATACGATGAAGCACGTGCT
GCACACGCCAAAAACCTTTTCCCTCATGTCTCCGAACGTATGTTGTTATA
CAAAAGACCTGTCTATCTCACTCAGGTAAGCGtgaaataaaatattaatt
tgtTAGTCTGAAGGTGACTGGCCCAGCTTCGGGCCTTTCACTAGCATGTC
AATGTCCGTGATATGCTGTATTTCCCTTTTTCGAAGAAGCGGTGCTTTGt
taatttaagtttattttgaaaaaaacggcgcCTTGTAACAATCAACGAAC
AAATATTTGACTATTCCTATGTTGCTTCGGCTTCTTGTTATTTGTTGGag
agcattttttcgaatttcgaataTAAACACCTTAAATACCTACCGGATCC
Gccacaaaaaaagtttctctctttaaaaccaattttctcgaattctaaaa
atttcgaaagaatcattcctatttcattggaaagaaaaaagataaactta
aattttgatagtttgtttattaaatttgattctttgaatcaaaaatgttc
aattgaataaaaaagttgctTTCAGAAAGTGCTTGAGAACGTTAAAAATC
GGTCTATCAAGTTAAACAAAGGGAAACCTTtttgtggtgcacccggtagc
AATTTCAATATAAACTGTCCACCATCCCCGGATTCTTTAAACAGTTGATT
CTTGATTTTTAGGGTCATATGCAATGGTTGTGGGATAGTGAAGGCAAACG
ATATTTAGATTTATTTGCTGGCATTGCTACTTGTGGTGTTGGACACTGTC
ACCCGTAAGTTAAGAAAATAATATCTTGCTTCTCGAATACGACATTTGGT
AGTCCATCTCGTTCATTTTTTGATAGATGATTCCCCCTATTGGCACGAAT
TCAAAGCAACGTTTAACAATAACGTTTACACATTCTTCATTTTACTTCAA
AACGCTAGAAAGGTATCACCGGATCATTAATTCAATGTTGCTACAACTTA
TAGGTATTTATACATAATTAAGGTCTGGATGGGAAAAATAATCACCCGCT
AGGTTCTTGTGGTCATCTTTATCAGGAAACTGGGCTACAGTAACTAATAA
CCAGCATCGACTATCGAATATTTTGAGTGACTTCAGATTTCTCTTTTAGG
AAAATTACAGAATCGATTCAAGATCAAGCATCAAAATTGGTGCATTGCTC
AAACTTGTACATCAATGCTAAACAAGCGGAATATGCTGAAAAATTGTTGA
CAAAATTGCCCGAAAAATATAACGTAAGAAAAGCCTTTCTTCTAAGCCTT
ATCATTAGCTTTGTAAAAAGGGTATCCCTGTAAGCCGAGAAATTTCATGA
CAGTCTCCTCTGTTATTTTGAGCtagattttcaagttttgccTGATTTGG
TTTGGATACAAAAATTCTATCTTTCCAAAAAGGTTGTCTATCATAGTAAA
TAACAATGACGGGAGGCCGAAAATTCGGTAGAACATTCAACAATCCAAAA
TGTTAATGTCTTTCTACTTATCCCTTAAATATTTTCCCTTTCATTCTACA
GCGTGTATACTTTGTGAACAGTGGATCAGAAGCGAATGATTTCGCTATGA
CCATGATGAGAGTTTACACTGGAAGCTGGGATATCATCGGATTGAGGTAT
GATGTGTAGATCTTTATAGAAGAGTTCTTTCAGCTTTGATAAGGTTATGT
AACTTACCGTGAAATCCACCATTATTGAATTTCTCCCAATCAAAAGTTTT
TCTACCGGTATATGTGCTATTCGAAATGCATTAAACTCAGAAAACGTGCA
AAAGAATACCTGCACTAAATCAATAGTCATCCATCTCGCTAGATTTAAAA
TGGTAATGAGTGACGATAAAGGCTCATCCCATTACTAATATTCTTATGAC
CTTTAGACTTCCAATAGGCCCTAATACCCCTCAAACAAGTATTTCTTCAT
TTCTActctatttttgaaatatttccttaTCATTTTCAGAAACGCTTACC
ACGGAGCCAGTCCCACCACTCTTGGCATCACCAACATGGGTCAATACAAA
TTCCCAACTCCACAAAACTTTGGTTGTCACACTGTAAGAATCGGCAATGA
TCATTTTTTCGCCATCCGAatgctctctctctctctttgcAGTCTGTTGA
AAATTTTCGCATGCATGCTCCTAACCTCCTAACCTCATCAAAATTATACC
TCTGAATCTAAATAGACCAACATaatatatttcccttttttcatttcaga
ttcCAAACCCAGATGTTTACAAAGGAATTTGGGGCGGAAAGAATTGCCGC
GATTCTCCCGTTCAAGTatgaattttaacaaaattaactttaaaatttAA
CTAAATTTTACTGCTACATAGATTCGTTCAAGAAATAACTTTCAATATGC
AACAATAAATTTAgactagccataattttcattaaagtgccaccgcagaa
taacgatcaaataagttgttgaatttggaaagaaatgttactgatagccg
atagtctacaaatattagcaatttgtgtccatctcatagatatcttctta
tagagataagataaagttatttatctgttttttttgtcatctcNACGATG
TGTAGATCTTTATAGAAAAGTTCTTTCAGCTTTGATAAGGTTATGTAACT
TACCGTGAAATCCACCATTATTGAATTTCTCCCAATCAAAAGTTTTTCTA
CCGGTATATGTGCTNCAATGGCTTGTTTATGtcatactaaacgctactgt
GCTAAACTGCCATTTTACTGTAATAGTCAAACGACAAGTCTTAgaaagga
taaaaatttctaatttccgttgctcagagcggttaataactagttgtggt
ttaaatagggaatttcccaacaaaaaaggaatttcccttaattcgactcc
ctgaggtaataaaaaaagacatatagaggtttgaaaatgggtaatcaaat
taaaaaaaatccggaaaagtgtttttaatgatgataaaacaatagaaata
cagtcaagctaagaatgttaccggtacaccatttaaccggaactaaaata
ctgaNCTCTCTTTGCAGTCTGTTGAAAAAACCTCCTAACCTCATCAAAAT
TATACCTCTGAATCTAAATAGACCAACATaatatatttcccttttttcat
ttcagattcCAAACCCAGATGTTTACAAAGGAATTTGGGGCGGAAAGAAT
TGCCGCGATTCTCCCGTTCAAGTatgaattttaacaaaattaactttaaa
atttAACTAAATTTTACTGCTACATAGATTCGTTCAAGAAATAACTTTCA
ATATGCAACAATAGATTTAGATTAGATTGCCCACCAATGTGGTTCATAAT
AATCTCTATTATTATAATCTACTATTTTTTAGGCTGACAGAGATTGTGAT
TGTGCTGAAGGTATTTAATTCTTTTTCTAAACGAGTTCAGAATATTTTGC
CATTTCGAGGGTATTTTAgcgttttgcagaatttaaaaTTCAGGCGAGAA
TGACATTTCTAGGCTTTCTACTTTACCTAATgggatatttcgatttggga
ggagTATAATGGCTTCCagactatattctcagcctaggGGGACCATAAAt
aagcttttggatcctcagaccAGAGTCTTAAGTCTCCTGtttaaactcag
agttaaaactgtACTTTCCAACCCTAAGTTAAGGCACTTAAAACTACTtg
ccctttttttaattttgcaagGAAATTCTTTTTGTGCAAAATGTTATAGG
CCATAGATAGTTTTGTGTACATAGAAAAATTAGTGAAATGGGAATATTAA
AGAACATAGGATCCCAAAGTAGTCAAACTACTGGCCAAAATTCCTCTACT
TTTATCTTTGTCTTTCAGGAGTATGTGAGGCCACAGACCTTTACCTCGGT
CAATTGGAAGATGTGTTGACCAATGTCACACCTCCAAAAGTTGCCGGATT
CTTTGGTGAACCCATCCAGGTcagatttttgttttaaatttgataaCTTA
ACTTGCCTTTTCAgattaaaactttcttttctccataactttttttttgc
tgagtaTGAACTGTTTATTTAAAAACACAGCTTCATTAGCTAAGCCATGT
ATcattgatccagtaaaaaatctgtttttccagaatgaaacaatgaaaat
atagtTTACCAATGGGGAATTAGTTTCAGGATCTTTTAAGCGACTATTAC
CGTTGGGGTCTTTATTGCACAGGAATCTTTATAACAAGTTAGCTACTTAT
ACTAAATTGGCGTTTTTCTGATCATATCATGTAGGGTGTCGGTGGTAGCG
TTCAATACCCACGTGACTTTTTACAAAAGACCTACGAGAAGATTCACGCA
CGTGGTGGACTTTGTGTGGCTGATGAGGTAgccatttttttatttccaaa
tttGTTTACACATTCATTGTATAGTTCTTTATTCACCATTTCCCATGCTT
TCGTGTAAACATTTCAAAGTCAATTATTCTGTCATTCACCAAAATCCATC
CGGATTCATATCTTATAGTTTcatcagaaaattattttgcacAGAAGTAA
TCTATTATAATATCTATAGAATTTAGTAAATGTTATTTGTTCTCCTTCAA
AAAGGTTCAAACAGGTTTCGGACGTACTGGTTCACATTATTGGGGATTCC
AAGGTTCTGGACTCAACCCTGACATCAGTAAGTGATTCGCTCTCCTGGTT
TCTTTCTAATTCTTGAAACGGAAATTTACAATTAATATCATAACATTTCC
TGATAAATTCAGTCAGGCTAAcaataaaagataaaagattTAGGCTTTAA
CGGGTGGTCAGATCTGAGATTTAGTGTGAATTAATAAACCAGATACTCTG
GACGGGTTTCATAGAGTTTTTTCGATAAAGTGAAGTATTATATTTACTTA
CTTGTTGTTCACAGTCGTGTGCGCCAAGACCATCGCTAACGGATTACCAA
TGGCTTGCGTTAtcacaacaaaagaaattgcTGACTCAATGAACGTTGCT
CTTCCATTCAACACCTACTCCTCAAATCCAGTCTCTTGCGCCGCTGCTAT
CACCGCTCTCGATGTAAGCTCTCTCTCATGGAATCATTCAATTAAGGTTA
CATACCAGGTTGATTTCATGGATTATGTTAACAGTTTTTCTCTGACCGCA
ATACTTGTTCGTCTGATGATTTCCAATTACTTTAAACTCACGAGTGAACT
TTTTTTCTGAcgccaaaacttttttttagaaTTAATACTCGATTAAAAGC
AATTACCTGATTTGATTAGATCCCTTGAATGGTCTTGAGTTCAGTTACAG
TTGCACAAATAATGTGCTGAACCTTTCTACGGGATGTAAGACAGCATAAA
AATTGGCACCTTTACCAGTTTCCCAATATTCCGTTTCTATTTTGTGGCGA
TACGCCTTGTTAATAAAGGCAGTTTCATAACGACGTTGTTTTCATTGTAG
GTTATCGACGAAGAAGGTTTACAAGAGAACTGTCAACGTGTTGGAACATA
TTGTTTGGAAGAACTATCGAAGATCCGTGATGATTACGAGATTGTCGGGG
ATGTCCGTGGTAAAGGATTGATGATCGGTATCGAAATGGTCGCCGATAAA
AAGGTATGCGTAAAGTTTGGTATGTCAGTTCAGTCGATATTATCCTCCTT
GTCTCCTTGTGTATTCAAATCTCAATCCTCTGTAAGGTCTATACCGACTT
AATAGTTGCTTACGGATTACTATCAAAAGTATGTTAAATTTCTACAATAA
AGGTTACCAATAATTTCACAATTATACCCTTTTCGAAGATAATGAGGTTC
ATTCTTTATTCACTTTCCAGACGAGAGCACCATTGCAACCAGAGAGAGTT
GGAGATATCATCGAACGAACGAAAGATTACGGAGTCTTGTTTGGTAAAGG
TGGACGATTTGGACAGGTAGATTTTCTTCTCATCATGCTTTGATCTTTGT
TGACCACCTCCTAGTCAAAcaaacatttttcattttgatgtgTCTGGTTT
AAGGTCTTGTTTACCAATAGATCATCCACGTCGCAAATTAAGGATGTAGC
TCATGCACACTCCGTCGACTTAGTTATTGTACGTGATTAAAAATTAGCAG
CAACTTTGGTTCAGTGCGTTATAGTTGCACCAAAAGTTTCAGAACTTTTA
TGTCTCATGGTCTAATAAAAACTGGAGCAAGAATTCATGTTTCTTCGAAT
GTCAAAGAGAGTCGAAATTTAAGAAGTATGACTGTTTCTTCACTAGTTTG
AATTACCTTATTAACTCGAAACTGGAATTATAGCGTCCACTGTGTCTTGT
AGAAATTAGTTGATTGCCCTAAATGACCAGAGTTGCAATCAAATTATGTT
TTCCATTCAGGTTCTTCGTATCAAACCACCAATGAACGTCACTAAAGAAG
ACATTGATTTCGGACTTGCTGTTCTCAGACAATCTATCGAAGAACATCTC
GCTCAATAGAAGGCGATGTTGTGAAACATACCAACGTTGAACATACAATA
TCAATGCAGGGTTCACAAGAAGACGAGACTATTGTGTATTCTGGTTAGAT
ATACATCGTCCCAGTAATTTTCGATGGAGCCTTGTCCTTATTGAAGAGCG
TCATTGAAAATTCATGGACCGTACTGCTGTTCCACAggcaaaaaataaac
aaagggAAGCATTATTCAGCACAGTTAAgtttataattttaaatcacCAC
GCCATTCCAAAAAtgctcattta

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006972	XLOC_006972	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000144	supercontig	sc0000144:295688..304760 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0369853	0.0559012	0.0608872	5.27206	0.00971675	0.0132136	0.00492039	0.0151946	0.0607072	0.00572701	0.0306583	0.0226893	6.53106	0.0122846	0.0600263	0.0809468	0.00896171	0.0126816	6.66309e-05	0.00464748	0	0.0042188	0.00136743	0.00101167	0.00638953	4.22267

Blast

[Close]

BLAST of TCONS_00012418 vs. Swiss-Prot (Human)
Match: AGT2 (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1)

HSP 1 Score: 499.59 bits (1285), Expect = 4.928e-169
Identity = 237/467 (50.75%), Postives = 305/467 (65.31%), Query Frame = 3

Query:  492 MPSTDFQPAEFKGMPYDEARAAHAKNLFPHVSERMLLYKRPVYLTQGHMQWLWDSEGKRYLDLFAGIATCGVGHCHPKITESIQDQASKLVHCSNLYINAKQAEYAEKLLTKLPEKYNRVYFVNSGSEANDFAMTMMRVYTGSWDIIGLRNAYHGASPTTLGITNMGQYKFPTPQNFGCHTIPNPDVYKGIWGGKNCRDSPVQADRDCDCAEGVCEATDLYLGQLEDVLTNVTPPKVAGFFGEPIQGVGGSVQYPRDFLQKTYEKIHARGGLCVADEVQTGFGRTGSHYWGFQGSGLNPDIIVCAKTIANGLPMACVITTKEIADSMNVALP-FNTYSSNPVSCAAAITALDVIDEEGLQENCQRVGTYCLEELSKIRDDYEIVGDVRGKGLMIGIEMVADKKTRAPLQPERVGDIIERTKDYGVLFGKGGRFGQVLRIKPPMNVTKEDIDFGLAVLRQSIEEHLAQ 1889
            MP  DF P  ++ + Y+     H ++L P V+     +++P+ L QGHM+WL+D+EG RYLD F+GI T  VGHCHPK+    Q Q  +L H S ++ +    EYAEKL   LPE    ++ VNSGSEAN+ AM M R ++ + DII  R AYHG SP TLG+TN+G YK   P   GC     PDV++G WGG +CRDSPVQ  R C CA   C+A D Y+ Q +D L+      +AGFF EPIQGV G VQYP+ FL++ +E + ARGG+C+ADEVQTGFGR GSH+WGFQ   + PDI+  AK I NG PMA VITT EIA S+   L  FNT+  NP++CA     L+VI EE LQEN Q VGTY L + +K+RD++EIVGDVRGKGLMIGIEMV DK +  PL  E V  I E  K  G+L G+G  F Q  RI P M +TK ++DF + V R ++ +H+ +
Sbjct:   48 MPPCDFMPERYQSLGYNRVLEIHKEHLSPVVTA---YFQKPLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMARAHSNNIDIISFRGAYHGCSPYTLGLTNVGTYKMELPGGTGCQPTMCPDVFRGPWGGSHCRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPKGFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTHDVLPDIVTMAKGIGNGFPMAAVITTPEIAKSLAKCLQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLKFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIFSQTFRIAPSMCITKPEVDFAVEVFRSALTQHMER 511

The following BLAST results are available for this feature:

BLAST of TCONS_00012418 vs. Swiss-Prot (Human)

BLAST of TCONS_00012418 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGT2	4.928e-169	50.75	Alanine--glyoxylate aminotransferase 2, mitochondr...	[more]

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TCONS_00012418 (transcript) - C. hemisphaerica