TCONS_00012406 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012406
Unique NameTCONS_00012406
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012406 ID=TCONS_00012406|Name=TCONS_00012406|organism=Clytia hemisphaerica|type=transcript|length=2923bp
NAATGTTTTCATGTTGGGAAACTTTGATGAATGCATCAATATTTCTAGCA
ATGCTCATTACTGCATGATGAACAATGTGGAAATTAAACCTTACTTATTT
GCAGAAGAAAAGTCCAGAAACAAGAAGTTCCATccAGCTAAGGTTGGTCT
TTGTTTGCCAAAAGAATGCTCAGTTCCAAATATTACATTTATGCTCCAAG
TTGTGGCTGATACACTGAATGAATCATATTTTCGAGTGAAAAACACTGAC
AATGACGGTGTCTGTTTCTCTGATTATGGTAAAGAAACTGAAATAGAAAT
TCCAATGCTAGTGCTGTTCAGTATACCTTTTGGTATTGCAATCTTGGCCA
CGATTTATGACTTGATAAATGATTTTTATGTCAAGAACCTTGCTGAACAA
CCCGGTTCAGAAGAGGAGATAAAAATCATTCCAAGATCTCAACTGCAAGA
AATTATCTTATCTTTCTCTATTGTTGAGAACACCAAACTTCTTTTCAAAA
CGCAAGATGACGTCATACCTACCAGAGATGGCAATAGTGAAGTTGACCAA
GTAACCAATGGCAACAACACGGTACATTGTATCCATGGCATTCGATCAAT
GTCCATGTTTTGggtcatttttggtcaattcCTGATGAATGCTGATCCAT
ATGTTTATAACAGCGTGACGATGAGAGCGTGGAGGAAACGAATCTCAATG
CAGATTGCATTCAACTCAATTCTGGCTGTTCTCACATTCTTCTTGATAAG
TGGTTTTGTAGTGGCCTACACCAACACAAAGAAGCTACAACAAGAGCGCG
ACCAGCAGATTAGAAATAACgcaagaaaaaaggaaaaacgaagaaagaaa
aatgacGATCCTCAAGAAGAAAATCATCTTCAACGAGAACACGAACCGTT
CACTCAAACTATTTCATTTTGGTTCTTCTATTTCTTTCATCGATTCGTAA
GATTGGTTCCACTGTATGGGTTTATCATTCTCTTTATTGGTTACATATGG
CCAGAACTTTCGAGAGGTCCTCTCTGGTATTCTCCACAGCCACGTGATTG
CCAATTGTATGGATGGACGAATCTGGTGTTTGCCAATAACATCCACGAGA
AATGGATTAAGAGCGAGTGTATTGATATTGGATGGTATTTGACTTTGGAT
TTCCAGTTTCACGTCATCTTTGCGTTCTTTACACTGCTTCTTGGACGATA
TTGGTTCAAGTTTAGGAGGTATACAGGATATGTTGTACCACTTTGCTGTG
TTGTGATTATTCTGGGTGTCAACATGTACCTGTTCGCTGAAGACTTGTCC
TTGTCACCTTTCTACGTCATGGTGCAAGACAACGATGACTCCAAAAGTGT
GAAAAATTGGGATTATTTCAGCAAATCACTTTACAAACCATGGTCATTGA
TCGCGGTCCCATATTGCATTGGTTTAGCTCTTGGGCAATACATcacaaaa
aatgatcaaaaacgTCGCCAATATCACCTATCAACCCTCAAAATAGTCTT
TGGTTGGGTTGTATCGATTTCCCTGGCACTGTTCTTTTTATTCATACCAC
ACAGTAATTTCAAGTCCACTGGATGGGAGCACCCTTTCCTGGTTGCATAC
GCTTTCTTTTTCCCGCTTGCGTGGAGCGCGGCCATTTCTTGGACTATCTT
TGCCTGTCACATGGGTATAGGAGGCATTTTCAACATCGTTTTGAGTTGGA
ATTTCTTCCAACCAATCAGCCGATTGACATATGGAGCGTTCTTCGGACAT
TATTTGTACATGAATTACTATTTCCAAACCCTCCGACGACCTTTGTATTT
GTCTGGCAGCACTGTGgctttcatgtTTTTGGGCTTAGTGGTGATTTCTT
ATTTTGTTGGTTACCTATTCGCCATCGTCTATGAATTCCCTTTTGCTCGA
TTGGAGAAGTTGTTGATNGTTCGCCATCATCTATGAATTCCCTTTTGCTC
GATTGGAGAAGTTGTTGATCAGCGACCAATGGAGGGAGTACATATTCAGA
GAGAAGATATCAAGCTTGTTACAACGAAGAGAAGCTGAAGAAGAAGAACA
TGATAATAATCAGCCAGGTCCATCTTCACGTCGAAGACGGTAAAATAAAT
GTTGTGACCCATTTTAAAGGTAGGCCACATTTTCttaatataaagttttt
tcttcacTTGCCTCTATACACATTTTCCTCGGACACAATAGCCAGGAATT
ATACCGTGTGTGACTTAGCTCTTTTTCTACTCAAACTTTATAGACTTAGC
CGGTATCAAGAGTTGAACTTGctataaaagtaaaaatcttcGTCTTCAAA
CAATCTTCTCAATATCATAACACATTTCGACTTCTACTCAGATGTCATAG
TTATTTCTTAATCATTTTCGGTAATTAACTTCTCATTTAGGGGCCGCGGC
TCtactttgaaagtgatagggccaCGAAATACTTATTAAGGAGGGGCCAC
CATGGATAGGGCCGacggacaaatttttttgaattttagccctACTAGAT
CGCCTAAAACAGGTCTGTTTTAAGGTTATTAAACAGGGTTTGGCTTGATA
AGTAAATTTCCTTTTTTGCTTTGCCGCGGCGCCTGAACATCTAGGATCAC
TTTGAATTTAACGATTATAAACATTTTTGCGTTACCCAGTTTGCCAAAGA
AGTACTTTTGTAgatacacgcttcttttttgTATAATTCGAAACTCTCAG
ACTAACCTGCATCTATTCATCCaaggtgtttgaaaatttcttcctgtATT
ACTAAAGTCGGAAGTAAATACTTTGATCTCAATCTTACAAAATTATGATA
GCCGCATCATGCATTTTTTTAGCACTCTCTCCGAGGCCTGCCTTGATTCT
ATTTTAACTGTAAAACACATAcacatatttttcttctttactgACACATG
AAAAAGAGAATAATTTATTAGTT
Run BLAST on NCBI

transcript from alignment at sc0000144:255619..265474+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012406 ID=TCONS_00012406|Name=TCONS_00012406|organism=Clytia hemisphaerica|type=transcript|length=9856bp|location=Sequence derived from alignment at sc0000144:255619..265474+ (Clytia hemisphaerica)
NAATGTTTTCATGTTGGGAAACTTTGATGAATGCATCAATATTTCTAGCA
ATGCTCATTACTGCATGATGAACAATGTGGAAATTAAACCTTACTTATTT
GCAGAAGAAAAGTCCAGAAACAAGAAGTTCCATGTAAGTGttaatattta
tttaaaaatatggtTACTTGTGCTAACAGTTCACACTTAAACATATCTTA
TGGTGTTATCTTTATGTTGCTTACTGAAACTAATTCATGTAataactttt
ttcttcatttaaaatAGACGTCTCTGAAATAATAATAGGTCTCTTCCGTC
TATGAATTAAAGGATAAAAGCAACATTAAAAGATTCTTATAGCAGTCTGA
TCCGAACGAGTATTCTGCTTTTATGGTGGGGTTTGGAATAAGGGAGGGGT
GGTaaagctttcaaaatttaataagtggtgaaaggaggctaatacaacag
aattagggcaaaagagggaacttttaaaaacattctcCAAAAGAATCAAT
AGAGCGGAGAGTGGagtttggaataaaaatgtcctgggtggaaaattttc
gaaaaattaattcaccgtttaggagtctcgctatctccACCGTGTTCCAC
CGTGAAAACGGTAGGCCagggtaggtaaaaatgcgcactttagtactgtg
gaaggtaagaggaatgtaaacattgtcaatttttttctttcctttaaaga
gaatgatttagatatttgaacatgatatcaatgataattttatggatctc
tcctgaaaatttcacaaaaattcatctagagaAAAAGAAgctatgattaa
aaggagttctttacgggttttcttatgaaaaacaaatccttacctaccgt
tttttacGCTCTCCCCCTTAGTTTCCCACAATCGCTGAAATTAAAACAAT
CTAAAcgatggaaaattgtttggacgcgtgcgcagtcgacactactaaac
ggtgtatcatgggggggggggcttattAGGTATCCGCCGCGAGTATAGTA
TTTTTTAGTATTGTTTGATAAATTCTCATTAACTTTAAGaccttttttac
cattttgccGGCTGTAATACATTTATCTCTTAAAACAGttatttgttgtt
ttcttttcagccAGCTAAGGTTGGTCTTTGTTTGCCAAAAGAATGCTCAG
TTCCAAATATTACATTTATGCTCCAAGGTAATTTGCATTTTAAAACTCAA
AGGTGAATGAAAAGTAAAGTCATATttatattgggcttttccagaaaaaa
atttaaaattggggggggtggaggatataacaatcttcagtgatttaccc
cctgacttttggccccccggacaacgggttttacccccggacaagcatca
cctcctggacagagcaaatttaccccccagaCAAGggaaattttgatgat
tttttgctatcCCCCCAGACACTATATtttccacccccatgtacggataT
TTTCTGTAAGAGCCCATTCTTTGATGAATTGCAATAAATGAAAGATCACC
TGGAAATAGGCGGTTATTGTGATTTATAACACTACTTGCTTTACACAATG
TGATTGCAAATTTCGGTTCAACTTATCAAAGACAAACTAGAGTATCAATG
ATGGCGGTAAAGTAAAAATTCTTGTACCAACTTTATGTTTGCCACAAAAG
TAATACACAAGAGAGCTCACTCAACTCAACACATTACtgaattcttaatt
tttcaataagCAAATTTATATGTATCAAAATGGTTGTAAACTGAACTCAT
TGATATACAGTATAACCTtcatcaaaatttagtcacttaacTGTAAAGCC
GCTTAGTTTTCAGCATTTCTGgtctttttcatttattataCCATGAGGCT
ATTgcacgaagaaaaaaatttccagctGCAAAAAAAGTCGTGATAGGGAA
AACCGCTTGGGGGCCTCATATAACATGTGTGTACCCACAGTAATGTGTCA
TTGTAATCTTCTTCCACTCTTTAGTTGTGGCTGATACACTGAATGAATCA
TATTTTCGAGTGAAAAACACTGACAATGACGGTGTCTGTTTCTCTGATTA
TGGTAAAGAAACTGAAATAGAAATTCCAATGCTGtaagaaaaagtttatt
ttctttccaagTGGAATTTTCGAATTCAATTTCCAACAGGGTGATTGTTC
TTATACCGAATCTACtttcaaaatgaaacttttGGAATGATCCTCTTTCA
ATTAATCTACACAGtatacagctccaggcttttagaccttactcttggtc
tataggcactgctataagCGGCCAATAGtagcccccaccgggaattaatt
attaataggtttaaacataatagacagctttcacaaaagatgtttatcaa
taaagatttcaaataaaagaatgtttaaaacacagtagactggcttaggt
ttcgaaactctattgtttcattaaaacctctgcgcgcatgcgatttatcc
ggagaatttcaatattcaaaacaagagtagttagtgctcatatcccgaaa
AGTAGGAGTTTTACtttcgaaacgaaggaagatatatgacgtagcctact
tTCAATGTTATTTTGTTACAATATTAAGCTCTGACCTTCATTCATATTTT
TAGTCCAGGGCTAATTCATCGGTTTATAtacctttttgtcaataataaAC
CTCTCTGGGACTTAGGTAAAATAAAGAAATGAGAAATGACTCTTTGGTgt
gatgttgttgttgttcttttgttgaaattctTCTCTTTTTTTAGAGTGCT
GTTCAGTATACCTTTTGGTATTGCAATCTTGGCCACGATTTATGACTTGA
TAAATGATTTTTATGTCAAGAACCTTGCTGAACAACCCGgtaaaattatt
taaattttgaaaattttctttgtctaaAACCCATGGCTATCATGTGCTTC
ATATTTCAAGTTACTATTTAAAGTAAATTATAAGTAATAATTTAAAGTAT
TAGCCAGTTATATAAATTAGAGATATTGATTTCTAAGCTCTGAAGGGGCT
AGATCTGAATCTCCAGGGATGGAAGcgacttatttcccatccagaacacg
tggcccgtgtgtttttcaaacaaaatttctaaatgcgggacaaaggcttc
acttttcttgctttataaaggttgaagattcatctctagTTCATTCGGGG
CTTCGAACTCAATGACGAGGAGTCAGTCCCAGAGCTTAGTACAGACATCT
TGCTTCAGCAAGACATCGGTTAATGGGAAAAGGCGCCCCGTAACCAACCT
ATTTTCTTcgaaatttcatgctctttcttTCAGTACCTACGAGAGTTCCG
GAAATCTtatagttctggagatatagcCCAGGtctctgggactgaaaggg
ttaacaaCAGCATCCATTGTTGTCGCTGATCTccattttcaatcattact
tTTTAGCCACTTTTAAATAAATTTCCAGTCACTGAAGGTGTTTGCAACAA
ATTTGCTTCGTTTCAtttctagaaaataaaaaaaatattctcattTTTGC
AACAGGTTCAGAAGAGGAGATAAAAATCATTCCAAGATCTCAACTGCAAG
AAATTATCTTATCTTTCTCTATTGTTGAGAACACCAAACTTCTTTTCAAA
ACGCAAGATGACGTCATACCTACCAGAGATGGCAATAGTGAAGTTGACCA
AGTAACCAATGGCAACAACACGGTACATTGTATCCATGGCATTCGATCAA
TGTCCATGTTTTGggtcatttttggtcaattcCTGATGAATGCTGATCCA
TATGTTTGTAAGttgacgtttttttataagaacaagctttataagaacac
aaggctttgatgcccaaaatattaagaacaaattaagaacattgagACTG
TGCAGGCTCTAAAACACAAATTTCTTAAtaaattacacaaaaatactctc
aaaatgATGAACATtacaacattttaaaaacatttttaggctaaaaactc
aaaaagctaagaacattggaattttggatgctcttataaaaatcaTGTTA
CGACAACCTTTTTGAATAAACCATGCGAACTAGAGAAACCCGATGCTTTG
TCCGACTTTTCCgattttgatttgaaagatACTTCTTTCATTACCTTTAC
TAGAAAGACCGTACTATAAAGGTAGAGCATCTGGCTATGGTGTGCAAAGG
TTCAATCCCTAGCCCGGTCATCCTATTTGATGCCTCTCTGTTAATGCTCA
ACAATTGAACGAAAACTTTTCAGATGAAAAGTGCGTACACCTCGCACAAG
TTATCGTATTACATGCATTACATCAATAACTTTTGTATAAATAACGCCCA
TATCTTTTGGTTCTTTTATTAGTAGTATTCTAGTATTAGTCAAGCCTCTA
AGTCTCTAAGTGACTTTTAATTGCCGATATAGTTTTTACCTATCTTTGAC
AGATAACAGCGTGACGATGAGAGCGTGGAGGAAACGAATCTCAATGCAGA
TTGCATTCAACTCAATTCTGGCTGTTCTCACATTCTTCTTGATAAGGTAA
ATCTACTTTTGAAATGAGGATTAGGGTCGTGTAAATTAGTTGGTCAGTAA
ATATAGCAATTTAAAACTCGCGTGTACAAAAACTAGAACGGTTTCGTAAC
ATAACAATGGTTTCAGCACGGCCTTTCACGGCTAAATGACAATGAACTCT
ATGTCCTTGGAGGTCTAAAATAATGATAAAGCAAAGGATAAAGCAATTTC
GTATGTCAGTTAGATAAGTATCTAATATGCAGTAGTAGATTTAAGACAGT
AGAGCAattacgtcggaaacatgcgaaggagttcAACGCTCGTTAATTGA
AAATtgcaattacaaatctcttcccctgataagttcgacagggTCTGAAG
TCACCTCTAAATATGCTGAACATTTTGCAGTTTCATATAATTTCGTCTCC
TACAGTGGTTTTGTAGTGGCCTACACCAACACAAAGAAGCTACAACAAGA
GCGCGACCAGCAGATTAGAAATAACgcaagaaaaaaggaaaaacgaagaa
agaaaaatgacGATCCTCAAGAAGAAAATCATCTTCAACGAGAACACGAA
CCGTTCACTCAAACTATTTCATTTTGGTTCTTCTATTTCTTTCATCGATT
CGTAAGGtttgttaaacatttttcagATGGAATAATTTCAAACGATGCAT
ATAAAGGGAGGATACATCAACCATGAAATTTTCGAGAGGATGACAAATAT
TTCCTTTTAAGTAATATTTTTCTAGTGTATGAAATACTATTAAGAAATAT
TGACTCAGGATGTAATTTATAAAGAACACAAAACGATCAAACTCTTCCTA
ATTTATTCAGATTGGTTCCACTGTATGGGTTTATCATTCTCTTTATTGGT
TACATATGGCCAGAACTTTCGAGAGGTCCTCTCTGGTATTCTCCACAGCC
ACGTGATTGCCAATTGTATGGATGGACGAATCTGGTGTTTGCCAATAACA
TCCACGAGAAATGGATTAAGAGCGAGGTGACTTGTGATTTTAATTTTGTC
CAATCTGTTTGGAACCtaagttattttttattgcgGGGTTTTTGATCCTT
TTCTATGGTGTAGCCAGCAAATAATTTTGCTTGACGATCTGGATAGAGCT
TTAGCAAGGGGGTTGAAACTGGGAACCTCTATTCATAGACATTTTGGTGA
AATTGAATCTTCTTCATACCATCATACTCCTAATATACTGCATATCGTCT
CATTTATACCATATGCATCTAGGGGTTGGAAATAAACGTGAAAAAAAATC
GTTATTGTGTTTTTAATTTCCGTACAGTACTTACGCTAAAATAACGAGTC
TTTAGGAATAATCTCAAACTTGGGCAATAATCTTTAAATCGAGCAATACC
GTAGAATCTTGACCCCCACGCAAGCTCTGTTTACATGTTAACGACAGCCA
AGTTTGTACAGTATTACAGTCTCAAACATAGTATTATGTTAAAGAGTCAT
TTCCTTCATTTTTAGTGTATTGATATTGGATGGTATTTGACTTTGGATTT
CCAGTTTCACGTCATCTTTGCGTTCTTTACACTGCTTCTTGGACGATAGT
GAGTATGTTTTGCTTAGGTACGCTTTTTTACCCTAATCACTTCAATAAGG
GAAGGAAAGAtgcatttctttttttaaatgactgtAAAAATCATAAGAAG
ATCGGCTTTCCGATCATTTCCTTGTTTGTAAAGACAATACTCGGACAAAG
ATTCCTCCTTCTCCTCCTCAAAGGGCAGAAAAAACGTATATTCATTTTAA
AAGATATAGTCTCTATGCTATTTAAACTCTGATCTATGAGAAATTATTTG
TGATACGCGTACAAGATGagatcatattttttaacggaagcaaccaaaaa
agccggattttgacctccgtgtttctatttttagtaacagagagaggtca
aatcccggcttttttcgggtgtttccgctagaaaaatgacttacgcatat
caagaattaagGCAGGTTTTACTACTTTTTTAGTTCAAgaaagtacagtt
gacgctctctaattcgattttcaaggggaattggatttttatcgaataag
ggagcgtgtCGAATAGCAGAGCAccatttatgagagtttcttgttgacgg
agactttcaatattatcgaataatggagcgtatcgaatagtagaacgtcg
aataaaGGAGTGTCGACTGTATTCTTTCTTCCTTCAGTTGGTTCAAGTTT
AGGAGGTATACAGGATATGTTGTACCACTTTGCTGTGTTGTGATTATTCT
GGGTGTCAACATGTACCTGTTCGCTGAAGACTTGTCCTTGTCACCTTTCT
ACGTCATGGTGCAAGACAACGATGACTCCAAAAGTGTGAAAAAGTAAGTC
CTTTCTGTAATTTTGTTGGAACTGATTGGAAGGCATAGTGTGAATGATGC
TACCCCTTCATTGAAAAGTGGTTTAACTTTTCGAGAAAGACCTCATAAAA
GGGTGTGCTACTTTAAAACCTGGGAAAGTTCCAGATTCAAACGAGAACTC
CGCGGGGGTATTTTTCAAACCTAGTTAAAACGCAGAATTCCAGAGAGGTT
TATATCTTCAGTCACAAACAACTTCTCAAAACGTTTTTTCTAGAAAAACC
CATTGAAACTAGGGTCTGTTCTCGATAAAAGGGCACAAGTTTCACGTTCG
AACATGCAGTGCATACCCATAACCGATTTGACCCATACTAATAATTTCAT
GCTCCCCTTATAGTTGGGATTATTTCAGCAAATCACTTTACAAACCATGG
TCATTGATCGCGGTCCCATATTGCATTGGTTTAGCTCTTGGGCAATACAT
cacaaaaaatgatcaaaaacgTCGCCAATATCACCTATCAACCCTCAAAA
TAGTAAGAATATAAATCTATtacaaattttctcaaaacaaaagaCTTTTC
CTAGGGCTAAATTGTTCGAACTTGTTCACGAATAGGATTTTCGTCGAACC
CGTCGAATCttatttagaacgccatggtcgAACCCTATTTATTTTTCGAT
ATATTTAAGTCGACACCTTTATTGAGCAGCACTCTTGGCGACTTGATCTA
AAAATGTCGCCagcagaatttttcttttttgattttagggTAAACTCTTA
TAGCCAAACTTAATTTTTCTTCCATATCATAGGATCCTACTTGGTTACTA
GCTGTTACAAGTCATTGCTGGAAATTTTACTATTTATCAGTGCCAAGTTT
ATTTCCTTTTCTATTAACAGGTCTTTGGTTGGGTTGTATCGATTTCCCTG
GCACTGTTCTTTTTATTCATACCACACAGTAATTTCAAGTCCACTGGATG
GGAGCACCCTTTCCTGGTTGCATACGCTTTCTTTTTCCCGCTTGCGTGGA
GCGCGGCCATTTCTTGGACTATCTTTGCCTGTCACATGGGTATAGGAGGT
AAAGAAAACTTTAATAGCTTGGACTCAGGTATCATGCTTGCCTCAATAGT
TAACAACTTCATCGCAGGTGCCATTAAATGAAACTTATGTGAAGAAATTA
TCCTCTAAAATCTttacttaaaaactttttatagtTAGCACCTTTATAAC
TGGGTATTATATGACAAGTTATCAAATCTTCACTACAGTTATATACTTCT
TTCAATACCTTTTAGTAAAAGACTATTGTATTTTGTTCAGGCATTTTCAA
CATCGTTTTGAGTTGGAATTTCTTCCAACCAATCAGCCGATTGACATATG
GAGCGTTCTTCGGACATTATTTGTACATGAATTACTATTTCCAAACCCTC
CGACGACCTTTGTATTTGTCTGGCAGCACTGTGGTAAATTTGTTTCctcc
cagctagcacacaacgttgtttcaacgttcatctaacgttatatggacgt
tgtgaacgttagataaacgttaaaacaacgctgTGTGTCAGCTTGGCTAG
TTTCTAACAGGCTTCTAGTTTTtgggattttgaatttttaaacttGAGTA
TCGATGACTTTAAATCTGTAAGTTATATTTTATTTCATGAAGCTTTTTAA
TTCAAAACTTCATTATAGCCTTTAAGTTTGATGCTTATGATTGCCCTTAT
GCCAGGTTGTCTCTTATGCTTAAGTTGTCAGGAGCTATAGCCAATATTTT
GGGATTTGGTTCTTCGACTTCATTTGAACTGAGTATTATGCAGAAACTCT
GTTCATAAATAGTGAGCACATCGagtacaaaaaatgttttcagaAGCACC
AAGCTATAAATCTAAAGAAACTTGGAATTTCTCCATTTTccctttttagg
ctttcatgtTTTTGGGCTTAGTGGTGATTTCTTATTTTGTTGGTTACCTA
TTCGCCATCGTCTATGAATTCCCTTTTGCTCGATTGGAGAAGTTGTTGAT
NGTTCGCCATCATCTATGAATTCCCTTTTGCTCGATTGGAGAAGTTGTTG
ATCAGCGACCAATGGAGGGAGTACATATTCAGAGAGAAGATATCAAGCTT
GTTACAACGAAGAGAAGCTGAAGAAGAAGAACATGATAATAATCAGCCAG
GTCCATCTTCACGTCGAAGACGGTAAAATAAATGTTGTGACCCATTTTAA
AGGTAGGCCACATTTTCttaatataaagttttttcttcacTTGCCTCTAT
ACACATTTTCCTCGGACACAATAGCCAGGAATTATACCGTGTGTGACTTA
GCTCTTTTTCTACTCAAACTTTATAGACTTAGCCGGTATCAAGAGTTGAA
CTTGctataaaagtaaaaatcttcGTCTTCAAACAATCTTCTCAATATCA
TAACACATTTCGACTTCTACTCAGATGTCATAGTTATTTCTTAATCATTT
TCGGTAATTAACTTCTCATTTAGGGGCCGCGGCTCtactttgaaagtgat
agggccaCGAAATACTTATTAAGGAGGGGCCACCATGGATAGGGCCGacg
gacaaatttttttgaattttagccctACTAGATCGCCTAAAACAGGTCTG
TTTTAAGGTTATTAAACAGGGTTTGGCTTGATAAGTAAATTTCCTTTTTT
GCTTTGCCGCGGCGCCTGAACATCTAGGATCACTTTGAATTTAACGATTA
TAAACATTTTTGCGTTACCCAGTTTGCCAAAGAAGTACTTTTGTAgatac
acgcttcttttttgTATAATTCGAAACTCTCAGACTAACCTGCATCTATT
CATCCaaggtgtttgaaaatttcttcctgtATTACTAAAGTCGGAAGTAA
ATACTTTGATCTCAATCTTACAAAATTATGATAGCCGCATCATGCATTTT
TTTAGCACTCTCTCCGAGGCCTGCCTTGATTCTATTTTAACTGTAAAACA
CATAcacatatttttcttctttactgACACATGAAAAAGAGAATAATTTA
TTAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006969XLOC_006969Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012406-exon-sc0000144-1491911889:255619..255751TCONS_00012406-exon-sc0000144-1491911889:255619..255751Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:255619..255751TCONS_00012406-exon-sc0000144-1510915933:255619..255751Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:255619..255751TCONS_00012406-exon-sc0000144-1575043694:255619..255751Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:256729..256795TCONS_00012406-exon-sc0000144-1491911889:256729..256795Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:256729..256795TCONS_00012406-exon-sc0000144-1510915933:256729..256795Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:256729..256795TCONS_00012406-exon-sc0000144-1575043694:256729..256795Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:257593..257701TCONS_00012406-exon-sc0000144-1491911889:257593..257701Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:257593..257701TCONS_00012406-exon-sc0000144-1510915933:257593..257701Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:257593..257701TCONS_00012406-exon-sc0000144-1575043694:257593..257701Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:258363..258457TCONS_00012406-exon-sc0000144-1491911889:258363..258457Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:258363..258457TCONS_00012406-exon-sc0000144-1510915933:258363..258457Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:258363..258457TCONS_00012406-exon-sc0000144-1575043694:258363..258457Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:259124..259375TCONS_00012406-exon-sc0000144-1491911889:259124..259375Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:259124..259375TCONS_00012406-exon-sc0000144-1510915933:259124..259375Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:259124..259375TCONS_00012406-exon-sc0000144-1575043694:259124..259375Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:260021..260114TCONS_00012406-exon-sc0000144-1491911889:260021..260114Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:260021..260114TCONS_00012406-exon-sc0000144-1510915933:260021..260114Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:260021..260114TCONS_00012406-exon-sc0000144-1575043694:260021..260114Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:260524..260724TCONS_00012406-exon-sc0000144-1491911889:260524..260724Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:260524..260724TCONS_00012406-exon-sc0000144-1510915933:260524..260724Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:260524..260724TCONS_00012406-exon-sc0000144-1575043694:260524..260724Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:260929..261094TCONS_00012406-exon-sc0000144-1491911889:260929..261094Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:260929..261094TCONS_00012406-exon-sc0000144-1510915933:260929..261094Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:260929..261094TCONS_00012406-exon-sc0000144-1575043694:260929..261094Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:261584..261666TCONS_00012406-exon-sc0000144-1491911889:261584..261666Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:261584..261666TCONS_00012406-exon-sc0000144-1510915933:261584..261666Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:261584..261666TCONS_00012406-exon-sc0000144-1575043694:261584..261666Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:262306..262461TCONS_00012406-exon-sc0000144-1491911889:262306..262461Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:262306..262461TCONS_00012406-exon-sc0000144-1510915933:262306..262461Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:262306..262461TCONS_00012406-exon-sc0000144-1575043694:262306..262461Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:262832..262970TCONS_00012406-exon-sc0000144-1491911889:262832..262970Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:262832..262970TCONS_00012406-exon-sc0000144-1510915933:262832..262970Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:262832..262970TCONS_00012406-exon-sc0000144-1575043694:262832..262970Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:263339..263516TCONS_00012406-exon-sc0000144-1491911889:263339..263516Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:263339..263516TCONS_00012406-exon-sc0000144-1510915933:263339..263516Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:263339..263516TCONS_00012406-exon-sc0000144-1575043694:263339..263516Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:263759..263901TCONS_00012406-exon-sc0000144-1491911889:263759..263901Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:263759..263901TCONS_00012406-exon-sc0000144-1510915933:263759..263901Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:263759..263901TCONS_00012406-exon-sc0000144-1575043694:263759..263901Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1491911889:264368..265474TCONS_00012406-exon-sc0000144-1491911889:264368..265474Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1510915933:264368..265474TCONS_00012406-exon-sc0000144-1510915933:264368..265474Clytia hemisphaericaexon
TCONS_00012406-exon-sc0000144-1575043694:264368..265474TCONS_00012406-exon-sc0000144-1575043694:264368..265474Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:255619..265474 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.238877	0.355729	0.135541	0.0150316	1.38443	1.59952	2.85383	2.54905	3.42227	3.88493	4.06416	3.48896	3.58175	3.70054	8.16702	7.38093	2.14728	2.026	8.40695	10.2344	1.50428	1.32089	2.44668	3.23785	6.01099	6.66666	2.1923	4.32373	6.92646	5.94396
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012406 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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