TCONS_00012394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012394
Unique NameTCONS_00012394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3572

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012394 ID=TCONS_00012394|Name=TCONS_00012394|organism=Clytia hemisphaerica|type=transcript|length=3572bp
AAGGCAATCGCATTTATTAGGAGAATCGTCGAAGATTAAAGCAAAGCTTA
GGCTCTGGGTGGAAAATGGACCACCTAGAGGAAAAAGCCAGTAATACTGT
GGAACATGTGCAACAGCTTTTACAACTTTGGAGGCATTATACAAACATTC
TCCCTGTGGAAGACACTTCCGTCAAAAACATTGCAAACGATATTTGTTGT
TTACTCTCTAAGACCAATAGCATGGATGCCTTGTCTGTGTTTCTCAATGA
ACTTCCAAATACCGATGTTTATTGGACTGAGGAATGTATTCTTCGAGCAA
AAGCCGAGGTAGCACTACACAAAAAAGACACAGACACTGTGAAAAAGATT
CTCAAGGAGAATCAATTCACCAACCATGACAAGCTGGTGGAAATATGGGA
CAAAGCCCACTACATTGAGGAGGAAAACcgacaaaataaaaagttatcaG
CTTTGTCCAGATTTCGAGTTCGAAAAAGAAATCCTCCCCCAAGGACAATA
TGTCTAAATGGTATCCGAAAAACTAGTTCCTTGCCTAAGGAAGCAACTGG
TCTTCTAAAGACTTGGCTCATAAATCACAAAAGTGATCCATATCCAAGCG
TACTTGAGAAACAGCAGCTGGCAAATCTATCTGGCTTGACCATCCCTCAG
GTGAAAACGTGGTTTGCCAATGCACGTCGTCGCTCAAAAACCAATTCCGA
AATGAAGATGAAACGATGTGAAGAGGGCTTCTCGAATTCCTTGAAACCCT
CATTTTATCCTCGGAAAACAGGAAGCCCATCATCATGCACACTTCTCCCG
TCGCCATCTTCGAGCAGTGTTTCCATGACGTCGTCAACAAGTGATCAACA
TGGTAGCACAGGATTAGGGAGCAGCTATCATCATTACTTCTCTTATGATA
ATATACCTCAAGGAGGCAACAATAACTGTAGCAATAATAATAATGACTCC
CTGGTGATGTCATCTACATCATCCATGGATAGTGTTGGCGGCGGCGGTGG
TGGTGGAAATTGTGGTGTGAGTAGTGGTGGTAGTGGTGCAACGCCCTGGT
ATTCGTCATTGAACAATATACATTCCCCAGTGCTACCATTGAGACTTGAA
GACTCGTCCCACTATTCGTCTCACCATTACTACTACAACAATCCAAATGT
TCATCACAACACCGCCCTCGCTACACATTCTACACCGCCCAACCTTGGCT
CTGCACCTTACAATAATACAAACAATACGGGTGGGGTGCGTTATCTTTAC
CCGCCCTCGTATCACCAGCATTGCAGTAATAATTATTTTGCCACAAATTA
TGGTGCTAGTTTGCAGCATTGAGGTTGGATATGTCTTTGAACTGGTGAGC
TATTTTCCTTTGCCCATCGGATAATATATATCTGCATTGACGAGGCAAAG
ATGGCAGCTTGTTTTGGACTGTAAATTCGTTAGAGAATTGATACAGTGGG
GAAACTTAATCGACATACTGTATTCTAATCATCAATTTTGTGGTGATCAC
TGTTTGGAAATATTACTGGAGATTGTAGACGATGATGGCTTTTATTTTGA
GAGCCNGTAGCACAGGATTAGGGAGCAGCTATCATCATTACTTCTCTTAT
GATAATATACCTCAAGGAGGCAACAATAACTGtagcaataataataataa
ctcCCTGGTGATGTCATCTACATCATCCATGGATAGTGTTGGCGGCGGCG
GTGGTGGTGGAAATTGTGGCGTGAGTAGTGGTGGTAGTGGTGCAACGCCC
TGGTATTCGTCATTTAACAATATACATTCCCCAGTGCTACCATTGAGGTA
TTTCCTGTTTCCACTTCTCTAATTGACTTGAAGACTCGTCCCACTATTCG
TCTCACCATTACTACTACAACAATCCAAATGTTCATCACAACACCGCCCT
CGCTACACATTCTACACCGCCCAACCTTGGCTCTGCACCTTACAATAATA
CAAACAATACGGGTGGGGTGCGTTATCTTTACCCGCCCTTGTATCACCAG
CATTGCAGTAATAATTATTTTGCCACAAATTATGGTGCTAGTTTGCAGCA
TTGAGGTTGGATATGTCTTTGAACTGGTGAGCTATTTTCCTTTGCTCATC
GGATAATATATATCTGCATTGACGAGGCAAAGATGGCAGCTTGTTTTGGA
CTGTAAATTCGTTAGAGAATTGATACAGTGGGGAAACTTAATCGACATAC
TGTATTCTAATCATCAATTTTGTGGTGATCACTGTTTGGAAATATTACTG
GAGATTGTAGACGATGATGGCTTTTATTTTGAGAGCCGTATCTTTCTGTC
AAGATAGCGTTTAGTGGTTTTTGATGTGATTTTGATTTAGTTATTTAGAT
TATTTATTTAGAAAGTGGGTTATTTTTGGTTTCGttgaatttcaaagaat
tttctcTGTAAATACTATTAAGAccaaaaagttaaattaaaagagTTTTT
CCCAATTCATGTAATGAATTTgggatttttagaaatttattattttattg
ttattagatttttaagaacattaaaaaaatgagaatttcagattttgtta
cattttgttagattttgatattttttaaacataatttatttttttgattg
tcAATGTGTGTCAAAAATTCTAATCACGagtttcaaacaaaaatgaagGA
CGAATCAAATATCAACACCgagaatattcaaaatttgcaaaGTCATTCAA
TCGAACCTTTAATTTGGAGATTTCGATTTCATACTTAATTGATgagtttc
tatttttttgtgTGTATTCTTTTCATTGGTCGATTTCAGTTTTAAACCGT
TTATCCCTAAACtgctttaatgggataaactttttgcggggattaaattt
cgcagatttcgcgaaaatccgcgaaattaagtcccaatggaaatttggaa
gggcctcttccgcgaaatatttctaaacaaaactcaaaatatgtcagata
aatactatttgaatggttacttgcatcaaagaagcgccaataatgtgtat
ttcaacaaccaacatgcatgatttgccAGTAAAAgccacaaaatcgtgaa
aataatGGCACCCAATAGTGttacccgcgaaattaagtccccgcgaaatt
tttgaatttcgcggatcgACCTAGGCCCaaccacgaaatttaatccccgc
gaaagtttatcccattaaagtagtgaTTTTTGCAGTTTTTGTGCATTCCA
ATGAAAAGCAATGGTTGATAGCGATACTCCcatcatttaaaaaatcttta
atttcgTTTTCATTAAGGATTTTAATTCAACCTACCGATGCATCTAATCC
TTAAGGGCTCTCTGACcatagtaaaaaaaataaaaaatatgaaaaatcgc
TATGATCAAAGCCCTTAAGGTATATCATATCAGTTAGAAATTTTTACAGT
CATTCGAAAGaagtttatttttgttaaagtttttcgTTAAGTTGCATTTT
gggatttcttttaaaaacaacattataaaaaatgatttaaaaaaatcgaa
accatacattatttattcatttgttAAACCTTCGAGCACCCCgggtgggg
ggggggcacaCTTGTAAATTTA
Run BLAST on NCBI

protein sequence of TCONS_00012394-protein

>TCONS_00012394-protein ID=TCONS_00012394-protein|Name=TCONS_00012394-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MDHLEEKASNTVEHVQQLLQLWRHYTNILPVEDTSVKNIANDICCLLSKT
NSMDALSVFLNELPNTDVYWTEECILRAKAEVALHKKDTDTVKKILKENQ
FTNHDKLVEIWDKAHYIEEENRQNKKLSALSRFRVRKRNPPPRTICLNGI
RKTSSLPKEATGLLKTWLINHKSDPYPSVLEKQQLANLSGLTIPQVKTWF
ANARRRSKTNSEMKMKRCEEGFSNSLKPSFYPRKTGSPSSCTLLPSPSSS
SVSMTSSTSDQHGSTGLGSSYHHYFSYDNIPQGGNNNCSNNNNDSLVMSS
TSSMDSVGGGGGGGNCGVSSGGSGATPWYSSLNNIHSPVLPLRLEDSSHY
SSHHYYYNNPNVHHNTALATHSTPPNLGSAPYNNTNNTGGVRYLYPPSYH
QHCSNNYFATNYGASLQH
Run BLAST on NCBI

transcript from alignment at sc0000144:220326..232001+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012394 ID=TCONS_00012394|Name=TCONS_00012394|organism=Clytia hemisphaerica|type=transcript|length=11676bp|location=Sequence derived from alignment at sc0000144:220326..232001+ (Clytia hemisphaerica)
AAGGCAATCGCATTTATTAGGAGGTGAtcgttttgaaattcttttctttt
gttattcaCCGTTAAACATATCGCTTCACACTTTTTGTGATGCgatatct
ttttatttggaatgtctttttggaatttgtttGGAAAGGGAAATCTTATA
CTTTATGCTGGGTCATAACAATAACAATTTTTTGCATACAGAAAAAAATG
TTAGAATAAAGTTGAATGtggataattaaaagttttaacattttttgttt
ggacTTTTTTGTTTAGCATTAATTGTTTATCttgataattttcttttcta
taGAATCGTCGAAGATTAAAGCAAAGCTTAGGCTCTGGGTGGAAAATGGA
CCACCTAGAGGAAAAAGCCAGTAATACTGTGGAACATGTGCAACAGCTTT
TACAACTTTGGAGGCATTATACAAACATTCTCCCTGTGGAAGACACTTCC
GTCAAAAACATTGCAAACGATATTTGTTGTTTACTCTCTAAGACCAATAG
CATGGATGCCTTGTCTGTGTTTCTCAATGAACTTCCAAATACCGATGTTT
ATTGGACTGAGGAATGTATTCTTCGAGCAAAAGCCGAGGTAGCACTACAC
AAAAAAGACACAGACACTGTGAAAAAGATTCTCAAGGTCAGTTTTCTTAT
tctattttgtcatttttcgtGTAGATAGGGCCTTATACGcaacattcgaa
ttttcttcaaaaacaaagtatgaaaaacgaaagtgaaagtcagAAGCGCT
CGCTGTGCTAAAGAACCACAATTCTCACACACATTTCACAGTTCAGGTCG
AgtcaaaccaaaacaaatcagcttaaaaaacaaaagacaagAAACATTGA
ATGGAGGAAACATGATATACTTTTGGTAATTATAATACTTTGTGATGAAA
AATGATTGATCTCCTCGTGGTTTTATCTTTGTTGGACTAAACTTTACACA
CTTTTTACTCatcaaaagttctttttttcttcaaatagaAACTTATTTTG
TAAGACAGCTTGTAAGTAGTCACACTTTTTTTAGTGAATTTTGAATAGTA
GAGCATTTCAtgccaaaaaaagttttatctAACTGTCTTATATATTTAGA
CAAAAATGCTTTTTATTTGTACATCATAGGCAGGGCCTTGCCGTGTATGG
TGGCACACACCTAAGATGGTTTGCAAGTGCTAAAATAACActcctaaaat
atacaagaatgTACAAAATCCTTTTTGCAAGGGCTAATAGCACACCATAA
TCTATGACATATCTTTTATGGAGTGCTATATTGACACACGCAAGTTATTG
TTCATGGCAAGGCCTGATAAGTAGTGTAAGGTAGGTATAGAGgagtttca
atgttttgattttgtaaggACGGACTGATGTGGGCAGTTAGTCActctag
cgtcccgccaaaatgcgtatcaatgctgcgaaagcgctatattgtttacc
tgactctcaagcaaaaaatgtgccgcaaaacttctaaagggattcatgga
aaaataacccggcgcttttaaatgaaattaacgTTCTCAAAatctatgag
aaattgcctaaaatttgacccATAGATGTaataatttgagccaagccaac
cttgagaactaatttgaagatcaacttcccaagaaaaagatctatggAGG
AGATGGAAcccaccgccggataggctatttcccggaaattttgccggacc
tcaaagaCTGACCCATTttcatgtgcggaattatttttactttagcgtta
AACTtagccttaaaaatcgaagcgctgtctcgggaattgaacgacaaatt
ttggttggttgattttggctgctgcacgttttattttgtttcaaactttc
aagtttttattaattgtcttccgaacttgattcaggtaactctcatcctt
gttgttgcaaatacatcctgtagatgactgatgttgttttttctgaaagc
tagattcctagtgtgactaactggtgGGCAGGCGATTGCGCTTGATTATT
AGAGGCAAATCAGGTAAAAGACTTACAATTTATATGGAAGCAAGTgaata
tcaatcaaatttttgacaaCTACCAGTCATATCtcttcaaaatttatgaa
tGGTAAGGCTGTTTACCTCTGAGAAAACAtgctaaaatttcttttcaaaa
gtccTACCAGAGActttgtcaaaacaaaaaatctgctTGCCTCCAGCTTA
TGGTCTTTTTGCCTCCAAAAGATCTGGCCATAAGTCACATGAGTAAACAA
ATGGCGTATCACAAAAGCCGTCAATAGTAGCCAAAACACtgactgaaaat
tttttaaagaagtaaCTGTTGGATGTTGCAACAGATAGTAAGGAGTTTTT
GCCTAGTTAGGAAAGTATTTTACATCCCTGATCTAGTCTAGACACCCTTC
AAGTTGCATATTATCTAAACTCCACTGACTACATCActaaaacaatgata
agaaaatatttaatgCATCGTTGTGATGCTGGGGTTTTTAACCATTCAAC
ATGCCATCATGTCCTGCAAAAAGTCTATTAAGCCTATCTatcctaggggg
gggggctttttctGATCAGGGGTGAAACAATTGTTAATAGCTCCCGAAAT
AATAGAGGTTTTGGGATGAAAATAAATGTGATGTGATGtaaatttctaac
ttttatttagtttcaaaataaaaaaaattcgacACCTAAaacttttcaca
ccttgagcatgatgacatttctgacagtaaggtgtcacaaaaattggcAC
ATCtcaaatacaaatttatttttcgtgtcaaatatattgtttaaaccgta
atttattgtatatttaggataaaataagcttTTTAGAACtcagccaaatt
tcatccaaaaagacccactagatcacaagttaaggggtggtacatgAAAA
GCCCCctccctagttctgaaccgcccctaaaagtctagtatgaatagggt
taaagccaAACTATTGTCAGAATTTTGTATGAAATGAAGATGGTTAGATC
TTTCAATTTCTTGAgtgtttttgaagaaagaaataGTTAATTTTTCTAGA
AATGTCAACAAACTAAAAATGCATCGTCACATTAAGGGAACCAAATTGTC
TTCCCAAGtctatttttggacctaccccggtgggctgtaggtcctataaa
ttaacctctgttcgttcgtccgttcgttcgtccgttcgttactagctttt
ctcgggattggtcattagtttttcctaatttttggcacaaagatgcaaaa
tggtaatgcccaaaatgtgacggagcccgattttcgaaaaaaattcattt
ccggccgaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
tcgctaaacgatatattttctgactgatttttttctcctcgcattgctat
ctaactttcatcatcaggtaggtccattcagcatctagcttgttttaaTA
AATActataagttggtctaatatcaacaATCCAGATACCCTTCAGAGTTT
GGAAAAAAAGGAAGGTTGGAATCACTGAGTGAAACTATATTTCTTCTCTC
AATCAGTCATTCTGACCTTCCTGTTATTCCTATCTCCTAAGAAGGGTGTA
AGGATAAGATGATTACGGTATTGATCCAACATGTTCAAAATATACTGAAG
CAAGACTTTTCCTCAGAATTACCCTGTTGTGAGAGCTACAATGTTCTTTG
TGTGCACagacttgttaaaagcaaactaacttttttaaatgatcaattag
gtctataagatccaaaaaacgagtggtgagaaaaattttgaccattttgc
tggtccccatgtgacgtcatcacttttgctggggcttgaaaacgaaagtt
aaaattaGAAGCTCTtatatggctcaaatgaaagatatttatccaaggat
tcaaaaaaatatcagaacatatacctgaaaatttttgagaagctataaag
gaaaatagctcaaaaaatgacgtcatcgatgacgtcatcggcaattaaaa
aatcgtcgaaatcgagaaatttttgtttcatttgaaagaggacctgcttg
ggaacaaaaaatattactacagAAAACCTTGAATTTCAATTGATAGGAAA
TTATTCCGTGAAATGCGTttgacttgactctcaagctttTTAAAGATTCC
TGGGCGTGCCCGAAACTAACCTTTCGTAggcaaatttaatgaattacaaa
TTTGCTGACAGGGGCCTATAAGGAGAAATTCAGGTAGAAGAAAACCGATA
GAAGAAAATACTTTCAGGTATAAGTTATGATACTTTTTGGAACCCGtgga
aaaatatctttcatttgagccatatatgagcttctaattttcactttcat
tttcaagccccagcaaaagcgatgacgtcacatggggaccagcaaaatgg
tcaaaatttttctcaccactcgtttttgtgattttatggacctaattgat
catttaaaaaagttagtttgcttttaacaactctgtgcacacgaagaaTG
CTTTCAGAACATAGTGGCTCTCACTATGTACATAAGTGTAACatatctga
aaaatgaaaacagccGGGTGTATCCCTTTAGATTAAACTTGTACTTAAAA
TTAACTTTTTGTTGCCTAAGAAAAGAGAGAAGCAAagttagtcccaataa
ggttaGTAAAATTAACaaacttttcctttttcttgctCCTCTTTagtcct
gctaagggtccgacGGTCCAAAGTTGGGTGGTACACCCCCGGTCAGCTCC
CAACCCTAATAACCACCTCCTCAGTATAACTAATGCCAAAACATAGGAAA
TGAGGGAGAAAAGTTTTCATGTTTGTTGGTTGTACTTCCATCAGTTGTCA
TTGTCATTGTTTCAAGAAAATCTATTAAATTTCTCCTCTCAAGAATCAAT
CTTCCTTGAAAAACACAATAATGCATTTCTTGACAAGAGatctttgaatt
tttatttgatgagTTTTAGCTCTGGTCTCTTCTCTTGAAAAGGTAGCGTA
ATCTTGAAAGCTTCATGTCATGTTTAGCTTGAAACGAgcctttttcaaaa
taatcagaTCGTATCTTTTAACAAACTATTCTATTCAACGTGTAGGAAAG
TTAATgaaaatgtatcaaaaaatgaaatattttcccCTTTTCAATCACAA
AATCCTGGTGTTATAAAGATGATTATTTCCAACGCAATACTCATTATTTG
ATCATTAGATGCCTCCCTTTTTTCTTTCTCTGAATACATCAAAATAACTG
ATTTGTTACTCTTATCGCAATGATATGTAATCCTTTTGAAACATTAGATC
ATCGTTTTAGAAAATGACCTGATACAAGCCATAAAAATTGGAGATTGGAG
ATTGGACAAATGAGTAGCTTAGCTATCCGAGCTAGAAGGaggatttttct
ttgaaaatacaagaaCAACTCCTGTATTCTCCAAGGAAAATAAATTGCAT
ACTTTCCAAGAAAAATATCATCTAAATTTCCATACTTTTCGACACATCAA
TTGACCAGAATTAATAATGAACAAgctcaaattttctaaatttgctATAA
ACATAAACCTAGCGATTGTGACGAATCATTATGACTTGactctttttatt
ttatattatcaACACCATGTTATGTGtacaaataaaattattaacaatta
attcaaaaaaataaaaatcggttcataaattacaaaaatgatacgtaatt
aaaataactttcGATCTCTTCTTCCATTTCAGGAGAATCAATTCACCAAC
CATGACAAGCTGGTGGAAATATGGGACAAAGCCCACTACATTGAGGAGGA
AAACcgacaaaataaaaagttatcaGCTTTGTCCAGATTTCGAGTTCGAA
AAAGAAATCCTCCCCCAAGGACAATATGTCTAAATGGTATCCGAAAAACT
AGTTCCTTGCCTAAGGAAGCAACTGGTCTTCTAAAGACTTGGCTCATAAA
TCACAAAAGTGATCCATATCCAAGCGTACTTGAGAAACAGCAGCTGGCAA
ATCTATCTGGCTTGACCATCCCTCAGGTGAAAACGTGGTTTGCCAATGCA
CGTCGTCGCTCAAAAACCAATTCCGAAATGAAGATGAAACGATGTGAAGA
GGGCTTCTCGAATTCCTTGAAACCCTCATTTTGTAAGTATTCAAGCTCGT
AGGACTTCTTTTTCTATGGTTTTCCATGCTTCATTAGCAAGACCAGAAGT
GCTCAGTGCTATCGCAGCATGTTCAAATGGCCTATGTTCTGTTCGCTGTT
CTGTCCGTTCTTCTTTAAGGAGTGAATTCTTGTTATTGTTTCTGCTAAAA
AACGCAATAAAGATGACGAAAAATGTTTATAGAACTGCGGTTGAAAAACT
CGAAATTGATCAGACAGGATCAACTATTgataaaacataattttttagca
attttttttatcttatatCCTGTTTCAAACCTACTACTTTTGCTACTTTA
ATACTCTTTATTCGACCTAGTTTAAGATAaatcaaaatactttttaaaca
tgagaatttttaaaggttttatcaAGAAAAATGATTGGACTTTGGAAGGA
TTTTCTCAACAATAAATAACGCTCCCtctttgtttctatttttaCGTTTC
TATTTCTATTACTCTTGCACAGACATTTTTCTCATAAATGTCAAGGTGTA
TCAACTTTAAACACatcaaatttcaataatatggaaggctgtttttttta
aaagaactattgcacaattttagttttttatcaTTCATTTAAAAGATATT
TGACCTCGATCTCACATTAAGAGGCAATTAAGAAGAAAATATCACAAACT
TTTAACCTTATGAATTTCTAATATCAATCTACgctttcaattttcaaact
tctgTGTAATCAGACCCGATATACAAAGCGATAAACTTTTGTTGTAAGAT
GTTTCCTAATcccaataaaatattgaaattaattGAACTAATGCTTTCTT
CAGATCTTCAGACATCTCCCTCTACTCATTAACATCAATTCCTAACATCT
TCATTAAACTTTAGATCCTCGGAAAACAGGAAGCCCATCATCATGCACAC
TTCTCCCGTCGCCATCTTCGAGCAGTGTTTCCATGACGTCGTCAACAAGT
GATCAACATGGTAGCACAGGATTAGGGAGCAGCTATCATCATTACTTCTC
TTATGATAATATACCTCAAGGAGGCAACAATAACTGTAGCAATAATAATA
ATGACTCCCTGGTGATGTCATCTACATCATCCATGGATAGTGTTGGCGGC
GGCGGTGGTGGTGGAAATTGTGGTGTGAGTAGTGGTGGTAGTGGTGCAAC
GCCCTGGTATTCGTCATTGAACAATATACATTCCCCAGTGCTACCATTGA
GGTATTTCCTGTTTCCACTTCTCTAATGGGCAGGATTGCGATTTTAGCAA
GTTAATCAGTCATACTTCTTTCTTTAACTTGGCCTCTGTGGAAGAGATTA
TTTCATGGTTTTTAATACTTTATTAGCATTCTTTAAATGGAGTCTACTTT
CTCTGTTTGGGAAGGGAACTCTGGCAGAAATATGTTCTGGGTATCATAGG
CGGTTTTCTTCAACCCTGATACCCGAGGCCTATTTTGAAACTATAAAAGT
CTTGCAAAATGTCACCTCCTAGTTAACCAGTGTGTAATTGTAAGGTTAAA
TTATTTCTGAAATGATTACTTCTTAACAGAACCAACCATTTTAATATATT
CATTTTCCCTCAGACTTGAAGACTCGTCCCACTATTCGTCTCACCATTAC
TACTACAACAATCCAAATGTTCATCACAACACCGCCCTCGCTACACATTC
TACACCGCCCAACCTTGGCTCTGCACCTTACAATAATACAAACAATACGG
GTGGGGTGCGTTATCTTTACCCGCCCTCGTATCACCAGCATTGCAGTAAT
AATTATTTTGCCACAAATTATGGTGCTAGTTTGCAGCATTGAGGTTGGAT
ATGTCTTTGAACTGGTGAGCTATTTTCCTTTGCCCATCGGATAATATATA
TCTGCATTGACGAGGCAAAGATGGCAGCTTGTTTTGGACTGTAAATTCGT
TAGAGAATTGATACAGTGGGGAAACTTAATCGACATACTGTATTCTAATC
ATCAATTTTGTGGTGATCACTGTTTGGAAATATTACTGGAGATTGTAGAC
GATGATGGCTTTTATTTTGAGAGCCNGTAGCACAGGATTAGGGAGCAGCT
ATCATCATTACTTCTCTTATGATAATATACCTCAAGGAGGCAACAATAAC
TGtagcaataataataataactcCCTGGTGATGTCATCTACATCATCCAT
GGATAGTGTTGGCGGCGGCGGTGGTGGTGGAAATTGTGGCGTGAGTAGTG
GTGGTAGTGGTGCAACGCCCTGGTATTCGTCATTTAACAATATACATTCC
CCAGTGCTACCATTGAGGTATTTCCTGTTTCCACTTCTCTAATTGGTAGG
ATTGCGATTTTAGCAAGTTAATCAGTCATACTTCTTTCTTTAACTTGGCC
TCTGTGGAAGAGATTATTTCATGGTTTTTAATACTTTATCAGCATTTTTT
AAATGGAGTCTACTTTCCCTGTTTGGGAAGGGAACTCTGGCAGAAATATG
TTCTGGGTATCATAGGCGGTTTTCTTCAACCCTGATACCCGAGGCCTATT
TTGAAACTATAAAAGTCTTGCAAAATGTCACCTCCTAGTTAACCAGTGTG
TAATTGTAAGGTTAAATTATTTCTGAAATGATTACTTCTTAACAGAACCA
ACCATTTTAATATATTCATTTTCCCTCAGACTTGAAGACTCGTCCCACTA
TTCGTCTCACCATTACTACTACAACAATCCAAATGTTCATCACAACACCG
CCCTCGCTACACATTCTACACCGCCCAACCTTGGCTCTGCACCTTACAAT
AATACAAACAATACGGGTGGGGTGCGTTATCTTTACCCGCCCTTGTATCA
CCAGCATTGCAGTAATAATTATTTTGCCACAAATTATGGTGCTAGTTTGC
AGCATTGAGGTTGGATATGTCTTTGAACTGGTGAGCTATTTTCCTTTGCT
CATCGGATAATATATATCTGCATTGACGAGGCAAAGATGGCAGCTTGTTT
TGGACTGTAAATTCGTTAGAGAATTGATACAGTGGGGAAACTTAATCGAC
ATACTGTATTCTAATCATCAATTTTGTGGTGATCACTGTTTGGAAATATT
ACTGGAGATTGTAGACGATGATGGCTTTTATTTTGAGAGCCGTATCTTTC
TGTCAAGATAGCGTTTAGTGGTTTTTGATGTGATTTTGATTTAGTTATTT
AGATTATTTATTTAGAAAGTGGGTTATTTTTGGTTTCGttgaatttcaaa
gaattttctcTGTAAATACTATTAAGAccaaaaagttaaattaaaagagT
TTTTCCCAATTCATGTAATGAATTTgggatttttagaaatttattatttt
attgttattagatttttaagaacattaaaaaaatgagaatttcagatttt
gttacattttgttagattttgatattttttaaacataatttatttttttg
attgtcAATGTGTGTCAAAAATTCTAATCACGagtttcaaacaaaaatga
agGACGAATCAAATATCAACACCgagaatattcaaaatttgcaaaGTCAT
TCAATCGAACCTTTAATTTGGAGATTTCGATTTCATACTTAATTGATgag
tttctatttttttgtgTGTATTCTTTTCATTGGTCGATTTCAGTTTTAAA
CCGTTTATCCCTAAACtgctttaatgggataaactttttgcggggattaa
atttcgcagatttcgcgaaaatccgcgaaattaagtcccaatggaaattt
ggaagggcctcttccgcgaaatatttctaaacaaaactcaaaatatgtca
gataaatactatttgaatggttacttgcatcaaagaagcgccaataatgt
gtatttcaacaaccaacatgcatgatttgccAGTAAAAgccacaaaatcg
tgaaaataatGGCACCCAATAGTGttacccgcgaaattaagtccccgcga
aatttttgaatttcgcggatcgACCTAGGCCCaaccacgaaatttaatcc
ccgcgaaagtttatcccattaaagtagtgaTTTTTGCAGTTTTTGTGCAT
TCCAATGAAAAGCAATGGTTGATAGCGATACTCCcatcatttaaaaaatc
tttaatttcgTTTTCATTAAGGATTTTAATTCAACCTACCGATGCATCTA
ATCCTTAAGGGCTCTCTGACcatagtaaaaaaaataaaaaatatgaaaaa
tcgcTATGATCAAAGCCCTTAAGGTATATCATATCAGTTAGAAATTTTTA
CAGTCATTCGAAAGaagtttatttttgttaaagtttttcgTTAAGTTGCA
TTTTgggatttcttttaaaaacaacattataaaaaatgatttaaaaaaat
cgaaaccatacattatttattcatttgttAAACCTTCGAGCACCCCgggt
ggggggggggcacaCTTGTAAATTTA

Coding sequence (CDS) from alignment at sc0000144:220326..232001+

>TCONS_00012394 ID=TCONS_00012394|Name=TCONS_00012394|organism=Clytia hemisphaerica|type=CDS|length=5028bp|location=Sequence derived from alignment at sc0000144:220326..232001+ (Clytia hemisphaerica)
ATGGACCACCTAGAGGAAAAAGCCAGTAATACTGTGGAACATGTGCAACA
GCTTTTACAACTTTGGAGGCATTATACAAACATTCTCCCTGTGGAAGACA
CTTCCGTCAAAAACATTGCAAACGATATTTGTTGTTTACTCTCTAAGACC
AATAGCATGGATGCCTTGTCTGTGTTTCTCAATGAACTTCCAAATACCGA
TGTTTATTGGACTGAGGAATGTATTCTTCGAGCAAAAGCCGAGGTAGCAC
TACACAAAAAAGACACAGACACTGTGAAAAAGATTCTCAAGGAGAATCAA
TTCACCAACCATGACAAGCTGGTGGAAATATGGGACAAAGCCCACTACAT
TGAGGAGGAAAACcgacaaaataaaaagttatcaGCTTTGTCCAGATTTC
GAGTTCGAAAAAGAAATCCTCCCCCAAGGACAATATGTCTAAATGGTATC
CGAAAAACTAGTTCCTTGCCTAAGGAAGCAACTGGTCTTCTAAAGACTTG
GCTCATAAATCACAAAAGTGATCCATATCCAAGCGTACTTGAGAAACAGC
AGCTGGCAAATCTATCTGGCTTGACCATCCCTCAGGTGAAAACGTGGTTT
GCCAATGCACGTCGTCGCTCAAAAACCAATTCCGAAATGAAGATGAAACG
ATGTGAAGAGGGCTTCTCGAATTCCTTGAAACCCTCATTTTATCCTCGGA
AAACAGGAAGCCCATCATCATGCACACTTCTCCCGTCGCCATCTTCGAGC
AGTGTTTCCATGACGTCGTCAACAAGTGATCAACATGGTAGCACAGGATT
AGGGAGCAGCTATCATCATTACTTCTCTTATGATAATATACCTCAAGGAG
GCAACAATAACTGTAGCAATAATAATAATGACTCCCTGGTGATGTCATCT
ACATCATCCATGGATAGTGTTGGCGGCGGCGGTGGTGGTGGAAATTGTGG
TGTGAGTAGTGGTGGTAGTGGTGCAACGCCCTGGTATTCGTCATTGAACA
ATATACATTCCCCAGTGCTACCATTGAGACTTGAAGACTCGTCCCACTAT
TCGTCTCACCATTACTACTACAACAATCCAAATGTTCATCACAACACCGC
CCTCGCTACACATTCTACACCGCCCAACCTTGGCTCTGCACCTTACAATA
ATACAAACAATACGGGTGGGGTGCGTTATCTTTACCCGCCCTCGTATCAC
CAGCATTGCAGTAATAATTATTTTGCCACAAATTATGGTGCTAGTTTGCA
GCATTGAATGGACCACCTAGAGGAAAAAGCCAGTAATACTGTGGAACATG
TGCAACAGCTTTTACAACTTTGGAGGCATTATACAAACATTCTCCCTGTG
GAAGACACTTCCGTCAAAAACATTGCAAACGATATTTGTTGTTTACTCTC
TAAGACCAATAGCATGGATGCCTTGTCTGTGTTTCTCAATGAACTTCCAA
ATACCGATGTTTATTGGACTGAGGAATGTATTCTTCGAGCAAAAGCCGAG
GTAGCACTACACAAAAAAGACACAGACACTGTGAAAAAGATTCTCAAGGA
GAATCAATTCACCAACCATGACAAGCTGGTGGAAATATGGGACAAAGCCC
ACTACATTGAGGAGGAAAACcgacaaaataaaaagttatcaGCTTTGTCC
AGATTTCGAGTTCGAAAAAGAAATCCTCCCCCAAGGACAATATGTCTAAA
TGGTATCCGAAAAACTAGTTCCTTGCCTAAGGAAGCAACTGGTCTTCTAA
AGACTTGGCTCATAAATCACAAAAGTGATCCATATCCAAGCGTACTTGAG
AAACAGCAGCTGGCAAATCTATCTGGCTTGACCATCCCTCAGGTGAAAAC
GTGGTTTGCCAATGCACGTCGTCGCTCAAAAACCAATTCCGAAATGAAGA
TGAAACGATGTGAAGAGGGCTTCTCGAATTCCTTGAAACCCTCATTTTAT
CCTCGGAAAACAGGAAGCCCATCATCATGCACACTTCTCCCGTCGCCATC
TTCGAGCAGTGTTTCCATGACGTCGTCAACAAGTGATCAACATGGTAGCA
CAGGATTAGGGAGCAGCTATCATCATTACTTCTCTTATGATAATATACCT
CAAGGAGGCAACAATAACTGTAGCAATAATAATAATGACTCCCTGGTGAT
GTCATCTACATCATCCATGGATAGTGTTGGCGGCGGCGGTGGTGGTGGAA
ATTGTGGTGTGAGTAGTGGTGGTAGTGGTGCAACGCCCTGGTATTCGTCA
TTGAACAATATACATTCCCCAGTGCTACCATTGAGACTTGAAGACTCGTC
CCACTATTCGTCTCACCATTACTACTACAACAATCCAAATGTTCATCACA
ACACCGCCCTCGCTACACATTCTACACCGCCCAACCTTGGCTCTGCACCT
TACAATAATACAAACAATACGGGTGGGGTGCGTTATCTTTACCCGCCCTC
GTATCACCAGCATTGCAGTAATAATTATTTTGCCACAAATTATGGTGCTA
GTTTGCAGCATTGAATGGACCACCTAGAGGAAAAAGCCAGTAATACTGTG
GAACATGTGCAACAGCTTTTACAACTTTGGAGGCATTATACAAACATTCT
CCCTGTGGAAGACACTTCCGTCAAAAACATTGCAAACGATATTTGTTGTT
TACTCTCTAAGACCAATAGCATGGATGCCTTGTCTGTGTTTCTCAATGAA
CTTCCAAATACCGATGTTTATTGGACTGAGGAATGTATTCTTCGAGCAAA
AGCCGAGGTAGCACTACACAAAAAAGACACAGACACTGTGAAAAAGATTC
TCAAGGAGAATCAATTCACCAACCATGACAAGCTGGTGGAAATATGGGAC
AAAGCCCACTACATTGAGGAGGAAAACcgacaaaataaaaagttatcaGC
TTTGTCCAGATTTCGAGTTCGAAAAAGAAATCCTCCCCCAAGGACAATAT
GTCTAAATGGTATCCGAAAAACTAGTTCCTTGCCTAAGGAAGCAACTGGT
CTTCTAAAGACTTGGCTCATAAATCACAAAAGTGATCCATATCCAAGCGT
ACTTGAGAAACAGCAGCTGGCAAATCTATCTGGCTTGACCATCCCTCAGG
TGAAAACGTGGTTTGCCAATGCACGTCGTCGCTCAAAAACCAATTCCGAA
ATGAAGATGAAACGATGTGAAGAGGGCTTCTCGAATTCCTTGAAACCCTC
ATTTTATCCTCGGAAAACAGGAAGCCCATCATCATGCACACTTCTCCCGT
CGCCATCTTCGAGCAGTGTTTCCATGACGTCGTCAACAAGTGATCAACAT
GGTAGCACAGGATTAGGGAGCAGCTATCATCATTACTTCTCTTATGATAA
TATACCTCAAGGAGGCAACAATAACTGTAGCAATAATAATAATGACTCCC
TGGTGATGTCATCTACATCATCCATGGATAGTGTTGGCGGCGGCGGTGGT
GGTGGAAATTGTGGTGTGAGTAGTGGTGGTAGTGGTGCAACGCCCTGGTA
TTCGTCATTGAACAATATACATTCCCCAGTGCTACCATTGAGACTTGAAG
ACTCGTCCCACTATTCGTCTCACCATTACTACTACAACAATCCAAATGTT
CATCACAACACCGCCCTCGCTACACATTCTACACCGCCCAACCTTGGCTC
TGCACCTTACAATAATACAAACAATACGGGTGGGGTGCGTTATCTTTACC
CGCCCTCGTATCACCAGCATTGCAGTAATAATTATTTTGCCACAAATTAT
GGTGCTAGTTTGCAGCATTGAATGGACCACCTAGAGGAAAAAGCCAGTAA
TACTGTGGAACATGTGCAACAGCTTTTACAACTTTGGAGGCATTATACAA
ACATTCTCCCTGTGGAAGACACTTCCGTCAAAAACATTGCAAACGATATT
TGTTGTTTACTCTCTAAGACCAATAGCATGGATGCCTTGTCTGTGTTTCT
CAATGAACTTCCAAATACCGATGTTTATTGGACTGAGGAATGTATTCTTC
GAGCAAAAGCCGAGGTAGCACTACACAAAAAAGACACAGACACTGTGAAA
AAGATTCTCAAGGAGAATCAATTCACCAACCATGACAAGCTGGTGGAAAT
ATGGGACAAAGCCCACTACATTGAGGAGGAAAACcgacaaaataaaaagt
tatcaGCTTTGTCCAGATTTCGAGTTCGAAAAAGAAATCCTCCCCCAAGG
ACAATATGTCTAAATGGTATCCGAAAAACTAGTTCCTTGCCTAAGGAAGC
AACTGGTCTTCTAAAGACTTGGCTCATAAATCACAAAAGTGATCCATATC
CAAGCGTACTTGAGAAACAGCAGCTGGCAAATCTATCTGGCTTGACCATC
CCTCAGGTGAAAACGTGGTTTGCCAATGCACGTCGTCGCTCAAAAACCAA
TTCCGAAATGAAGATGAAACGATGTGAAGAGGGCTTCTCGAATTCCTTGA
AACCCTCATTTTATCCTCGGAAAACAGGAAGCCCATCATCATGCACACTT
CTCCCGTCGCCATCTTCGAGCAGTGTTTCCATGACGTCGTCAACAAGTGA
TCAACATGGTAGCACAGGATTAGGGAGCAGCTATCATCATTACTTCTCTT
ATGATAATATACCTCAAGGAGGCAACAATAACTGTAGCAATAATAATAAT
GACTCCCTGGTGATGTCATCTACATCATCCATGGATAGTGTTGGCGGCGG
CGGTGGTGGTGGAAATTGTGGTGTGAGTAGTGGTGGTAGTGGTGCAACGC
CCTGGTATTCGTCATTGAACAATATACATTCCCCAGTGCTACCATTGAGA
CTTGAAGACTCGTCCCACTATTCGTCTCACCATTACTACTACAACAATCC
AAATGTTCATCACAACACCGCCCTCGCTACACATTCTACACCGCCCAACC
TTGGCTCTGCACCTTACAATAATACAAACAATACGGGTGGGGTGCGTTAT
CTTTACCCGCCCTCGTATCACCAGCATTGCAGTAATAATTATTTTGCCAC
AAATTATGGTGCTAGTTTGCAGCATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006968XLOC_006968Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012394-exon-sc0000144-1491911889:220326..220348TCONS_00012394-exon-sc0000144-1491911889:220326..220348Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:220326..220348TCONS_00012394-exon-sc0000144-1510915933:220326..220348Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:220326..220348TCONS_00012394-exon-sc0000144-1575043694:220326..220348Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1491911889:220629..220961TCONS_00012394-exon-sc0000144-1491911889:220629..220961Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:220629..220961TCONS_00012394-exon-sc0000144-1510915933:220629..220961Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:220629..220961TCONS_00012394-exon-sc0000144-1575043694:220629..220961Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1491911889:227208..227607TCONS_00012394-exon-sc0000144-1491911889:227208..227607Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:227208..227607TCONS_00012394-exon-sc0000144-1510915933:227208..227607Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:227208..227607TCONS_00012394-exon-sc0000144-1575043694:227208..227607Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1491911889:228490..228826TCONS_00012394-exon-sc0000144-1491911889:228490..228826Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:228490..228826TCONS_00012394-exon-sc0000144-1510915933:228490..228826Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:228490..228826TCONS_00012394-exon-sc0000144-1575043694:228490..228826Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1491911889:229189..229920TCONS_00012394-exon-sc0000144-1491911889:229189..229920Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:229189..229920TCONS_00012394-exon-sc0000144-1510915933:229189..229920Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:229189..229920TCONS_00012394-exon-sc0000144-1575043694:229189..229920Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1491911889:230255..232001TCONS_00012394-exon-sc0000144-1491911889:230255..232001Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1510915933:230255..232001TCONS_00012394-exon-sc0000144-1510915933:230255..232001Clytia hemisphaericaexon
TCONS_00012394-exon-sc0000144-1575043694:230255..232001TCONS_00012394-exon-sc0000144-1575043694:230255..232001Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012394-proteinTCONS_00012394-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:220326..232001 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.563153	0.981335	0.447432	0.0794165	1.45788	0.84018	0.752728	0.0920654	0.738746	0.593531	0.168466	0.397902	0.645384	2.43074e-10	0.40182	1.12331	1.09084	1.2315	2.74275e-05	0	0.452056	0.429021	10.5199	14.5369	1.26583	1.26914	42.4477	36.1637	9.66554	6.37961
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR031701SIX1_SD
IPR008422Homeobox_KN_domain
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Blast
[Close]
BLAST of TCONS_00012394 vs. Swiss-Prot (Human)
Match: SIX1 (Homeobox protein SIX1 OS=Homo sapiens GN=SIX1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.819e-30
Identity = 67/185 (36.22%), Postives = 110/185 (59.46%), Query Frame = 3 
Query:  144 NILPVEDTSVKNIANDICCLLSKTNSMDALSVFLNELPNTDVYWTEECILRAKAEVALHKKDTDTVKKILKENQFT--NHDKLVEIWDKAHYIEEENRQNKKLSALSRFRVRKRNPPPRTICLNGIRKTSSLPKEATGLLKTWLINHKSDPYPSVLEKQQLANLSGLTIPQVKTWFANARRRSKT 692
            ++LP    + + +A  +C +L +  +++ L  FL  LP  D     E +L+AKA VA H+ +   + KIL+ +QF+  NH KL ++W KAHY+E E  + + L A+ ++RVR++ P PRTI  +G   +    +++ G+L+ W   +  +PYPS  EK++LA  +GLT  QV  WF N R+R + 
Sbjct:    2 SMLPSFGFTQEQVAC-VCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTI-WDGEETSYCFKEKSRGVLREW---YAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA 181
The following BLAST results are available for this feature:
BLAST of TCONS_00012394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SIX17.819e-3036.22Homeobox protein SIX1 OS=Homo sapiens GN=SIX1 PE=1... [more]
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