TCONS_00012390 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00012390
Unique Name	TCONS_00012390
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1534

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000144:211797..218873+
coding sequence from alignment at sc0000144:211797..218873+

transcript sequence

>TCONS_00012390 ID=TCONS_00012390|Name=TCONS_00012390|organism=Clytia hemisphaerica|type=transcript|length=1534bp
AGTTTTTCTACCTTCTTCGGCGCTGTTGTCTTGATTTTTCATACCtgttg
aatttttctttattttgcagtatgaaaaatatgaaaaataaatttaaatt
tagaagAGCCTCGGAATAAGTGGTGATAACCAAAATATCCCATCATGGCA
ATGTTCAATATCTACAACGAGCTGGTGACCCGAAAATACCACACTCATTT
TTGGAGTTTTGCGACCATCTTTTACATTTGCGTCGGCGTAATCACGTACG
TCGGGCCGTTACTGATCGCCTACTACTCTCTAGGATTTTGGTTGAAAGAA
AGCACTTACCGTGAACAACCAGAAGTGAGGTTCAAACACGATTTGATATT
GGTCTTGCAAGGCACCTCTACAGTTCTTGGATACAGCACCTACAATAATT
TCAATACCATTTTGCGAAACAGGCTTCGAACGTCAACTATAAAGTCGCAA
GAAGTTGACGAGAACAGCGATGGTAGATACGATTATTTGGAGTTCACTTT
AGAAATGCCCATCAATGCGAACGAAGATGTTCGATCGGTGCAATTATTGC
TATTTTTCCATTATAAATTGCACAAATATAGTAGCGTTGAGCTAGAGTCG
TTGGCTTATTTACATTACGATTCTGGAATATCTGGGTCTTCATTTTACAC
GGACGGTGACCTAttgttgaaacaaaagaatcccTTATCTCACAAAGGAA
GCTTCACTAAATTCAATaCGGGAATCGTTGACAGGACGAACACGGACGTC
AATGCTTTGAACCTTCACTCTATTCTCACTAACTACCAAGCACGAAACTT
GACGACGGATTTCATTGGACGTTACCCATCATGGATTTCTGGAAAATCAA
CCACATTCAAAATACAGACGAAGATATATTACCCCGAACAAACTATAATC
TATCAACCGGGATTTTGGCAACTCTTGAAACACGCTTGGATTCAATATCT
GGCCatccttttcattttcatgtttaTTTTCGGTCACGTGAAATCTTTCA
TTTACGAGAATCGATTAGTGGCCACAATCATCAAGAAGAAACATCATAAC
GATTGACGGGAAGAATAATGCTACTTGTCATCTTGAAGAACGGAAAATGA
GAATGGTTTTTTCAGGAAATATATCTGGATTTCGAAATCGGGTTTAGTTG
TCGAAGATCATCATTTGGTTcgcttaaattttttttagaaaatgaactGA
TGATTCATATATGAATGATAATTTGAAATAGATTCTGCTAGAAACTCTAA
TTGAGCGTTGTTAACTTCTGATGGAATGGAAGTGATTGTTAGTTGCATCT
TGTTTCGGCACTGTTTGGAAGTATCAATTTTCTACGGCAgataaaaaata
tcttttttaggaCTAGGAGGTTTGGAAGGTTTTTATCAGCTGTTATATAT
TGTTTAAAGATGCATATTTACACGTCAGAGGATTTTAGAAGATATTTATT
CCTTATTCAATCTTACCTACAAATTTTGACGTTTTCTTAATTCCATAGGT
GACTAGGGAAAATACTCCCTTAAGTAGTTTAGAG

Run BLAST on NCBI

protein sequence of TCONS_00012390-protein

>TCONS_00012390-protein ID=TCONS_00012390-protein|Name=TCONS_00012390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MAMFNIYNELVTRKYHTHFWSFATIFYICVGVITYVGPLLIAYYSLGFWL
KESTYREQPEVRFKHDLILVLQGTSTVLGYSTYNNFNTILRNRLRTSTIK
SQEVDENSDGRYDYLEFTLEMPINANEDVRSVQLLLFFHYKLHKYSSVEL
ESLAYLHYDSGISGSSFYTDGDLLLKQKNPLSHKGSFTKFNTGIVDRTNT
DVNALNLHSILTNYQARNLTTDFIGRYPSWISGKSTTFKIQTKIYYPEQT
IIYQPGFWQLLKHAWIQYLAILFIFMFIFGHVKSFIYENRLVATIIKKKH
HND

Run BLAST on NCBI

transcript from alignment at sc0000144:211797..218873+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00012390 ID=TCONS_00012390|Name=TCONS_00012390|organism=Clytia hemisphaerica|type=transcript|length=7077bp|location=Sequence derived from alignment at sc0000144:211797..218873+ (Clytia hemisphaerica)
AGTTTTTCTACCTTCTTCGGCGCTGTTGTCTTGATTTTTCATACCtgttg
aatttttctttattttgcagtatgaaaaatatgaaaaataaatttaaatt
tagaagAGCCTCGGAATAAGTGGTGATAACCAAAATATCCCATCATGGCA
ATGTTCAATATCTACAACGAGCTGGTGACCCGAAAATACCACACTCATTT
TTGGAGTTTTGCGACCATCTTTTACATTTGCGTCGGCGTAATCACGTACG
TCGGGCCGTTACTGATCGCCTACTACTCTCTAGGTATGCCAATTTGTTGT
TTATGTTGCACGGCCCAAAGTTAcggaaaaaaagttaaaatcacTGATGG
TAAATAATCCGAATTTATTATAAGATACGTCTACACGTCAAAAGgtagtt
ggaaagatatttcttcGGCTTACATATTCTTCTTATTATACTCATATGCA
AGTGAATTAGTGAcgaaaaaatcgcgaaatttttatACCGACAAATTTTA
ATAGGCGATAACTTTTTTGGCCGACGATTATTTTTGACCGACAATTAATT
TTCGACCGACTAACTTTTCTTACGAAATGATTTTTCGTTACTTGCTACTG
AACATTCTTTCGTTTAAATATCGAATAGTTGATAAATGCTCAATTTAATT
TTCTCACATTCAGGATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACC
AGAAGTGAGGTTCAAACACGATTTGATATTGGTCTTGCAAGGCACCTCTA
CAGTTCTTGGATACAGCACCTACAATAATTTCAATACCATTTTGCGAAAC
AGGCTTCGAACGTCAACTATAAAGGTATGCTAATGCTTTCAAGCTGAAAG
TCTATGCTTTAACCACTTACCACCCTCCTGAAATTGTTTGTTAACAATGT
GCGATTTAAGTAAACTTTTTGTGAATATATTATCTCAAATTAGAGTGGAA
AAATAGTGAAATTTAAACGGATAAGAATGGCAAGTTACTGTTCCATTGGT
GAGTGTAGTCACAGAGTCCATTATCTAGCGCTAGTGACTTCTCATATGCG
TGATGATAGTACAGCAAGTACATAACCCAACTAAAGTAGAATGCCATAAA
CGAAGACGGGTAAACTCATGTATGGCCTCAACAGAAATATTTATGGTTTA
TGATTGGCCAATAGAAAATTTAAATCAATaataatgatatttttctattt
aaCAGTCGCAAGAAGTTGACGAGAACAGCGATGGTAGATACGATTATTTG
GAGTTCACTTTAGAAATGCCCATCAATGCGAACGAAGATGTTCGATCGGT
GCAATTATTGCTATTTTTCCATTATAAATTGCACGTGAGTTTCATAATTT
TTCTCTAAACCAACACTCCTATCTCGTTGTCTTGTTCACAATTCTAAAGC
cgttttgatgaaatttgtgtTCTTCTGACTGAAGCATGACTTTgcgatca
attttttttaaagttggcGCATCATCGGGTATATAATACAGGGTATAAAA
CCATCTCATAAGGAAGTCCTAGGAATCGATGGGAGTCTTAACAAACCTTT
ATCTCATTTTTAGAAATATAGTAGCGTTGAGCTAGAGTCGTTGGCTTATT
TACATTACGATTCTGGAATATCTGGGTCTTCATTTTACACGGACGGTGAC
CTAttgttgaaacaaaagaatcccTTATCTCACAAAGGAAGCTTCACTAA
ATTCAATGTAGGTTGcaatttttcgatattttgtttttctgtttatCTCA
GCTAAACGTTtctaaatttgatttaaaatcattGTGAAATTTCTGCGCTA
AATAATAATTTGCAGTATTTACAACTTGATTTGGGGGATTTGTTCTAAGC
CACTACATACTAAAGGTAATGATCTCACTTAAGGCTTTAAATCATACTCG
AAGTCATTAGAGGGACATAAAattagtaaaatgtaaacattacgcaaacc
acgtgtcattaaagagaacaataaaAATCACGTGTCcgaaacaaacttgt
aaaacaattgaaacaatcaaaatcggccatatttgtttttattttttatt
ttcacatctgacatttgttttgatttttatcccgctgcatacggtttgtt
taagAATTTCGTCattacttttatgtccctttaaaacgCACATCATTAAC
ACAATCATTACAAACATAGTACCTTAGGTCtcctctctttttttttgtag
aCGGGAATCGTTGACAGGACGAACACGGACGTCAATGCTTTGAACCTTCA
CTCTATTCTCACTAACTACCAAGCACGAAACTGTAAGTAGCAAACTATCT
AGTCATCGAATAAAGAAGTCAGGGTAAAATCGGGGAAAGCGTTTACTCCG
AGAAGATTCTGGCCACTTTGTTTCGAATAGCACAAGACTGCACAAGACAG
GGAATCTAAAAAAAGTATCAAATCTGCACAAATTTATTCGTTTGGACGAC
TTGTAATCCCATCCTACTTTGCTTTTGCACGTTGATTACTTGCGTTGTCA
AAGGAAAGGTAATAGCTTAAAGGGTTTTCAAATCATTTCGAAATGAGCTG
CTGTGatattggaactcgtacaattttctagttgaaataattatgacAAG
TAAAACGCAGAGCGCTATTCTCTTCACAGGCAAGTTATAttataaaaagc
aaaacaaatctTTTTCGGTTTTTGACCTCGGTGAAAACAAGGAACTTGGT
GAAAAGGAGCGCGTTGCTCAAAAAGTGAAGGAAAATCTGACAGCCGTTTA
GCAAAACTATCAAGAAGGTTGAAATTCAATTTATGGCATCAACTGCTTTT
TTGGTGACTAATTAAGtggtaaaatttgataaataattCAATTTAGCTTT
TCCTTTTCCATGTGTGTTTTCGACTTCGAAAGCTTTTGAGTAGCTTATAA
CCATTATAACCTGCATCGTATTAAAGGATTAAGTAGTCGAGTAGTCTatt
ggtttattttgtttaaaaaaatgaatatcgaATAAAATGGTACTTTACTA
CTTTAGTAATGAAACTAACATAATTCTtccttttttaaagttttcgTATT
TAAAAATTGCTATTTCGTGGCATATTCATATTCATTTTGGCAAGGAAACA
TGAAGGTTTTCTAGTTCGATGGGGAGGGGTCCTCAATTCTCTTTCTGGTG
GTTTCACTTGCACGTTTCAGACCTTCTGCTTTGTTTCGTTTCTTCCTTTA
TATCCTAGGAAAGTCAGTTTAGTGAAATTTGCATGCTGTTAACGTGGTTC
TGTGGTTTCTTGCTCATACTTTCAACTTTCAAtagtttttggccaaaatt
gacGATTCTTACACAGTTGCCCTTTGCAACAGATTGTCGCAATCCTTATT
CAAACTTTTGACCCATTGCACTTGGAAGCACTGAATTTGAGCAAATAACC
GGTTCAATCAAGAATTCTTGAAGAACAAAAAACAATTTGTGGCTCAAGGa
gtttttatcaaataaagGAAAGCTAGGTCAAAGCCCCAGAAATCTTTTAT
ACATGGGGGAATCTTCTGAGTCGACAGGAGTGTGTGCATATGATTACATA
TGGTCTCAAATATCCTTTTCTCTTTGAAAATGACCCAAATCATCCTTCTC
TTAGCTATGTCTAAAAACTAAAGCCCTAATGTTGTTACTTATTGTTACTT
GTAGGTTTTGGAAAATATCATgctcattaaaaaatttacgACTGTACTAC
CAGGAATTCGGTACTGATAAGTGCTCGTTGCGGTTTGTAACTTGCTGATA
AAAAAGCGATTAGTTTTATTTCTACCatgaatatatatttgaaaaagaTA
TTCTCCGAAATTTGAAAGAGATTACTTAAGAGTTTAAATCGTTAAAGCAG
ACTTGATACTGGTTTAAGGATTTTAATTCTCAATCAACTCTGGAGCTTAG
TACGTGAAACGAGCAACGTGTGTGAGATCTTATCTGAAATGTTTTCATGA
AATGTCTACATTGTGCATTCATTGACATGAAATAAACCACATATGTTATT
CTATGATATGTGAAATTGAATTTCATTCTCGATGTTAGTGGAAAAATCCT
GTTTCGGTTCTTATTTCCCTATTATGACAGCGAAACGGAAAATTGGATTT
TAGAGGTCTACTTTTCATCCAAACAAAACCATCTCTATCTTAATTTACTC
TATTTGGTCGACTTTTTACAATTTACCAGCTGCCACTTGAATTTATCCCC
TTACCGCCCCCTGCTACCACGTTAATGGtcttatatattttataagactT
AAACAGAACATGTTTGCAATTGGAGAGTTGAATTAGTTGACCCCAACTCT
TGTAATTTCAACCGTTATCTTCTAGAAATGCTCTGTTCCATTCAATAAAA
TGGGATGGCTTTAAAAACgaatcaaaaatctttttcgacaAGCCTCTTGT
CATCTGCTTGTCACTTTTACTTTATAATTTGATCAACTCGCTTTAAGTTC
GTTACCTTATTTCCTCTACGTCTAGCGCCATCCCTAGAAAGTTCTTTAAC
TAAAGTCCCATTTTATAAGACCACCGCCCTAGTTGCTTGAGAAATTGAGT
TATCTCAAGCGCACAGAGTGTAATTACTTAAAACTATTATCTGACTATTC
AAATTTTGAGTCTCATATTTCAAGTGTAATGACAACATGTACCCTGTCGT
GTACTGATGTAGATCTCCTTGTAAGATGTAACGTTTTTAATCAATTGCTT
TATCAATTACTATATTAATCTGATTGTCGAAGGTCTGTTCATACCATTAG
AAGATTTCGAAATCTTGTTAAGTTGTTACATCTTTTGTGTCTCTGGTGTT
CCAATTAGCGTTTTAAGAACATTGCGTTTCATTGGACTCGGGGGAAATAA
AGTTNTGGTGTTCCAATTAGCGTTTTAAGAACATTGCGTTTCATTGGACT
CGGGGAAAATAAAGTTGTCTCTCCATAACTTAGAAAAATAACGGGGAACT
CGAGTATGTTCTAGTTATTCGctttatggagactctactgtttcggtttg
gaaaaaaaatagcACTTGGAaagattttggtcaattttccctagttaata
aaaaaaattagtcaCTAACCCTCAAGTCTTTCCCCGGATAAAGTAGTAAT
ACCTGGATTATCTCAATCAATACTCGCCGTCAAACATTTATTTTCTCTTT
GGAAAATAAGGTGGCCAATGGAAGTAAAGGGTCCCTGGAAAGTTTCGATA
AATCCTGGATTTTCTTATGTCTGCCTCAGATCTTAGTCCTTTAACAGGCA
TCCGCGGCTACTCGTTTTTTTTAGgaaacacttttaagaaacatgaggct
cagaatgccttaaaactaagaaacatgctgtggctgagaatgagaaaata
acattttttatgcgatttttttaagaaccttccaatccagccttcctaTT
GACAGGAAcgaaaaaatccttttttttcaGCTCCTTCAAGCCACAAAGCC
GTGAAATCCATATAGTGTCCATTCAAAATTGGAACGTGAACTTTAAGCAA
TAGCATTTTTGGTGAATTAAGAGAGCTCAGAGTAATGGTGTTTAGAGTTT
ATAGTGCAGGTCTGCCACGATGCTTGGTTTCAAAGCTAAGGATGCAAACA
GATTGAGCTTTTAAAGGTGATAAATTGAGCTGCTCTCTTGAGAAAATACA
ATACATgattttttatcataatttatttAATACAGTGACGACGGATTTCA
TTGGACGTTACCCATCATGGATTTCTGGAAAATCAACCACATTCAAAATA
CAGACGAAGATATATTACCCCGAACAAACTATAATgtatctttttcaaaa
cttgctCCTCGCTTTTTTTTACCTTTGCTTGGGGGCATTTTGTTTAACCT
TAACGCTAGTCGGAGAAAGGTGGTCTTAAACTGAGGTTACTGGCATCCTG
AATGAAATTGAATAGATAGGTACATACCCATCCTAACATGTGAAATGTGT
TTTGTAGAGAATTGCAATCACATTATtctaaacataaacaaaaaaaggGA
GTTCTTGTTTTggctaaatttttcttttggtaGACCTCAAAATACTCTCT
CTTTGAAAGTTCAAAAGGCGTGGCCGTTTAATTTAGTTTCCTTTGTTTTA
AAGCCAGACGTTATTTGTTGCAGTGTTTTCGAGGGGAATCGCTCAGGAAA
CATTGAGGAACCGAGGTGTGCCGCTAATCAAGGTCTCTTTTCTCCTCAAG
CCCCAAAAATATCACGCTAGGGTCGATAATTCATTACATTTTGAATGTTA
TTATTTGAAAGGGTCAACTTTCGGTCATTGCAGCCAGTTTTCAGtgtatg
ttttgaaaaaatgtaacAGATTCGAACTTCGTCAAAATGTAGAATctgta
gaaaatatttttaaaaaatttaaggcATTTCTCAGTGATTTAGGTTATCT
CTAGATTCTTAACTATCCTTAACCTCTTGATTTCAAATCTAGCTATCAAC
CGGGATTTTGGCAACTCTTGAAACACGCTTGGATTCAATATCTGGCCatc
cttttcattttcatgtttaTTTTCGGTCACGTGAAATCTTTCATTTACGA
GAATCGATTAGTGGCCACAATCATCAAGAAGAAACATCATAACGATTGAC
GGGAAGAATAATGCTACTTGTCATCTTGAAGAACGGAAAATGAGAATGGT
TTTTTCAGGAAATATATCTGGATTTCGAAATCGGGTTTAGTTGTCGAAGA
TCATCATTTGGTTcgcttaaattttttttagaaaatgaactGATGATTCA
TATATGAATGATAATTTGAAATAGATTCTGCTAGAAACTCTAATTGAGCG
TTGTTAACTTCTGATGGAATGGAAGTGATTGTTAGTTGCATCTTGTTTCG
GCACTGTTTGGAAGTATCAATTTTCTACGGCAgataaaaaatatcttttt
taggaCTAGGAGGTTTGGAAGGTTTTTATCAGCTGTTATATATTGTTTAA
AGATGCATATTTACACGTCAGAGGATTTTAGAAGATATTTATTCCTTATT
CAATCTTACCTACAAATTTTGACGTTTTCTTAATTCCATAGGTGACTAGG
GAAAATACTCCCTTAAGTAGTTTAGAG

Coding sequence (CDS) from alignment at sc0000144:211797..218873+

>TCONS_00012390 ID=TCONS_00012390|Name=TCONS_00012390|organism=Clytia hemisphaerica|type=CDS|length=6384bp|location=Sequence derived from alignment at sc0000144:211797..218873+ (Clytia hemisphaerica)
ATGGCAATGTTCAATATCTACAACGAGCTGGTGACCCGAAAATACCACAC
TCATTTTTGGAGTTTTGCGACCATCTTTTACATTTGCGTCGGCGTAATCA
CGTACGTCGGGCCGTTACTGATCGCCTACTACTCTCTAGGATTTTGGTTG
AAAGAAAGCACTTACCGTGAACAACCAGAAGTGAGGTTCAAACACGATTT
GATATTGGTCTTGCAAGGCACCTCTACAGTTCTTGGATACAGCACCTACA
ATAATTTCAATACCATTTTGCGAAACAGGCTTCGAACGTCAACTATAAAG
TCGCAAGAAGTTGACGAGAACAGCGATGGTAGATACGATTATTTGGAGTT
CACTTTAGAAATGCCCATCAATGCGAACGAAGATGTTCGATCGGTGCAAT
TATTGCTATTTTTCCATTATAAATTGCACAAATATAGTAGCGTTGAGCTA
GAGTCGTTGGCTTATTTACATTACGATTCTGGAATATCTGGGTCTTCATT
TTACACGGACGGTGACCTAttgttgaaacaaaagaatcccTTATCTCACA
AAGGAAGCTTCACTAAATTCAATaCGGGAATCGTTGACAGGACGAACACG
GACGTCAATGCTTTGAACCTTCACTCTATTCTCACTAACTACCAAGCACG
AAACTTGACGACGGATTTCATTGGACGTTACCCATCATGGATTTCTGGAA
AATCAACCACATTCAAAATACAGACGAAGATATATTACCCCGAACAAACT
ATAATCTATCAACCGGGATTTTGGCAACTCTTGAAACACGCTTGGATTCA
ATATCTGGCCatccttttcattttcatgtttaTTTTCGGTCACGTGAAAT
CTTTCATTTACGAGAATCGATTAGTGGCCACAATCATCAAGAAGAAACAT
CATAACGATTGAATGGCAATGTTCAATATCTACAACGAGCTGGTGACCCG
AAAATACCACACTCATTTTTGGAGTTTTGCGACCATCTTTTACATTTGCG
TCGGCGTAATCACGTACGTCGGGCCGTTACTGATCGCCTACTACTCTCTA
GGATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACCAGAAGTGAGGTT
CAAACACGATTTGATATTGGTCTTGCAAGGCACCTCTACAGTTCTTGGAT
ACAGCACCTACAATAATTTCAATACCATTTTGCGAAACAGGCTTCGAACG
TCAACTATAAAGTCGCAAGAAGTTGACGAGAACAGCGATGGTAGATACGA
TTATTTGGAGTTCACTTTAGAAATGCCCATCAATGCGAACGAAGATGTTC
GATCGGTGCAATTATTGCTATTTTTCCATTATAAATTGCACAAATATAGT
AGCGTTGAGCTAGAGTCGTTGGCTTATTTACATTACGATTCTGGAATATC
TGGGTCTTCATTTTACACGGACGGTGACCTAttgttgaaacaaaagaatc
ccTTATCTCACAAAGGAAGCTTCACTAAATTCAATaCGGGAATCGTTGAC
AGGACGAACACGGACGTCAATGCTTTGAACCTTCACTCTATTCTCACTAA
CTACCAAGCACGAAACTTGACGACGGATTTCATTGGACGTTACCCATCAT
GGATTTCTGGAAAATCAACCACATTCAAAATACAGACGAAGATATATTAC
CCCGAACAAACTATAATCTATCAACCGGGATTTTGGCAACTCTTGAAACA
CGCTTGGATTCAATATCTGGCCatccttttcattttcatgtttaTTTTCG
GTCACGTGAAATCTTTCATTTACGAGAATCGATTAGTGGCCACAATCATC
AAGAAGAAACATCATAACGATTGAATGGCAATGTTCAATATCTACAACGA
GCTGGTGACCCGAAAATACCACACTCATTTTTGGAGTTTTGCGACCATCT
TTTACATTTGCGTCGGCGTAATCACGTACGTCGGGCCGTTACTGATCGCC
TACTACTCTCTAGGATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACC
AGAAGTGAGGTTCAAACACGATTTGATATTGGTCTTGCAAGGCACCTCTA
CAGTTCTTGGATACAGCACCTACAATAATTTCAATACCATTTTGCGAAAC
AGGCTTCGAACGTCAACTATAAAGTCGCAAGAAGTTGACGAGAACAGCGA
TGGTAGATACGATTATTTGGAGTTCACTTTAGAAATGCCCATCAATGCGA
ACGAAGATGTTCGATCGGTGCAATTATTGCTATTTTTCCATTATAAATTG
CACAAATATAGTAGCGTTGAGCTAGAGTCGTTGGCTTATTTACATTACGA
TTCTGGAATATCTGGGTCTTCATTTTACACGGACGGTGACCTAttgttga
aacaaaagaatcccTTATCTCACAAAGGAAGCTTCACTAAATTCAATaCG
GGAATCGTTGACAGGACGAACACGGACGTCAATGCTTTGAACCTTCACTC
TATTCTCACTAACTACCAAGCACGAAACTTGACGACGGATTTCATTGGAC
GTTACCCATCATGGATTTCTGGAAAATCAACCACATTCAAAATACAGACG
AAGATATATTACCCCGAACAAACTATAATCTATCAACCGGGATTTTGGCA
ACTCTTGAAACACGCTTGGATTCAATATCTGGCCatccttttcattttca
tgtttaTTTTCGGTCACGTGAAATCTTTCATTTACGAGAATCGATTAGTG
GCCACAATCATCAAGAAGAAACATCATAACGATTGAATGGCAATGTTCAA
TATCTACAACGAGCTGGTGACCCGAAAATACCACACTCATTTTTGGAGTT
TTGCGACCATCTTTTACATTTGCGTCGGCGTAATCACGTACGTCGGGCCG
TTACTGATCGCCTACTACTCTCTAGGATTTTGGTTGAAAGAAAGCACTTA
CCGTGAACAACCAGAAGTGAGGTTCAAACACGATTTGATATTGGTCTTGC
AAGGCACCTCTACAGTTCTTGGATACAGCACCTACAATAATTTCAATACC
ATTTTGCGAAACAGGCTTCGAACGTCAACTATAAAGTCGCAAGAAGTTGA
CGAGAACAGCGATGGTAGATACGATTATTTGGAGTTCACTTTAGAAATGC
CCATCAATGCGAACGAAGATGTTCGATCGGTGCAATTATTGCTATTTTTC
CATTATAAATTGCACAAATATAGTAGCGTTGAGCTAGAGTCGTTGGCTTA
TTTACATTACGATTCTGGAATATCTGGGTCTTCATTTTACACGGACGGTG
ACCTAttgttgaaacaaaagaatcccTTATCTCACAAAGGAAGCTTCACT
AAATTCAATaCGGGAATCGTTGACAGGACGAACACGGACGTCAATGCTTT
GAACCTTCACTCTATTCTCACTAACTACCAAGCACGAAACTTGACGACGG
ATTTCATTGGACGTTACCCATCATGGATTTCTGGAAAATCAACCACATTC
AAAATACAGACGAAGATATATTACCCCGAACAAACTATAATCTATCAACC
GGGATTTTGGCAACTCTTGAAACACGCTTGGATTCAATATCTGGCCatcc
ttttcattttcatgtttaTTTTCGGTCACGTGAAATCTTTCATTTACGAG
AATCGATTAGTGGCCACAATCATCAAGAAGAAACATCATAACGATTGAAT
GGCAATGTTCAATATCTACAACGAGCTGGTGACCCGAAAATACCACACTC
ATTTTTGGAGTTTTGCGACCATCTTTTACATTTGCGTCGGCGTAATCACG
TACGTCGGGCCGTTACTGATCGCCTACTACTCTCTAGGATTTTGGTTGAA
AGAAAGCACTTACCGTGAACAACCAGAAGTGAGGTTCAAACACGATTTGA
TATTGGTCTTGCAAGGCACCTCTACAGTTCTTGGATACAGCACCTACAAT
AATTTCAATACCATTTTGCGAAACAGGCTTCGAACGTCAACTATAAAGTC
GCAAGAAGTTGACGAGAACAGCGATGGTAGATACGATTATTTGGAGTTCA
CTTTAGAAATGCCCATCAATGCGAACGAAGATGTTCGATCGGTGCAATTA
TTGCTATTTTTCCATTATAAATTGCACAAATATAGTAGCGTTGAGCTAGA
GTCGTTGGCTTATTTACATTACGATTCTGGAATATCTGGGTCTTCATTTT
ACACGGACGGTGACCTAttgttgaaacaaaagaatcccTTATCTCACAAA
GGAAGCTTCACTAAATTCAATaCGGGAATCGTTGACAGGACGAACACGGA
CGTCAATGCTTTGAACCTTCACTCTATTCTCACTAACTACCAAGCACGAA
ACTTGACGACGGATTTCATTGGACGTTACCCATCATGGATTTCTGGAAAA
TCAACCACATTCAAAATACAGACGAAGATATATTACCCCGAACAAACTAT
AATCTATCAACCGGGATTTTGGCAACTCTTGAAACACGCTTGGATTCAAT
ATCTGGCCatccttttcattttcatgtttaTTTTCGGTCACGTGAAATCT
TTCATTTACGAGAATCGATTAGTGGCCACAATCATCAAGAAGAAACATCA
TAACGATTGAATGGCAATGTTCAATATCTACAACGAGCTGGTGACCCGAA
AATACCACACTCATTTTTGGAGTTTTGCGACCATCTTTTACATTTGCGTC
GGCGTAATCACGTACGTCGGGCCGTTACTGATCGCCTACTACTCTCTAGG
ATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACCAGAAGTGAGGTTCA
AACACGATTTGATATTGGTCTTGCAAGGCACCTCTACAGTTCTTGGATAC
AGCACCTACAATAATTTCAATACCATTTTGCGAAACAGGCTTCGAACGTC
AACTATAAAGTCGCAAGAAGTTGACGAGAACAGCGATGGTAGATACGATT
ATTTGGAGTTCACTTTAGAAATGCCCATCAATGCGAACGAAGATGTTCGA
TCGGTGCAATTATTGCTATTTTTCCATTATAAATTGCACAAATATAGTAG
CGTTGAGCTAGAGTCGTTGGCTTATTTACATTACGATTCTGGAATATCTG
GGTCTTCATTTTACACGGACGGTGACCTAttgttgaaacaaaagaatccc
TTATCTCACAAAGGAAGCTTCACTAAATTCAATaCGGGAATCGTTGACAG
GACGAACACGGACGTCAATGCTTTGAACCTTCACTCTATTCTCACTAACT
ACCAAGCACGAAACTTGACGACGGATTTCATTGGACGTTACCCATCATGG
ATTTCTGGAAAATCAACCACATTCAAAATACAGACGAAGATATATTACCC
CGAACAAACTATAATCTATCAACCGGGATTTTGGCAACTCTTGAAACACG
CTTGGATTCAATATCTGGCCatccttttcattttcatgtttaTTTTCGGT
CACGTGAAATCTTTCATTTACGAGAATCGATTAGTGGCCACAATCATCAA
GAAGAAACATCATAACGATTGAATGGCAATGTTCAATATCTACAACGAGC
TGGTGACCCGAAAATACCACACTCATTTTTGGAGTTTTGCGACCATCTTT
TACATTTGCGTCGGCGTAATCACGTACGTCGGGCCGTTACTGATCGCCTA
CTACTCTCTAGGATTTTGGTTGAAAGAAAGCACTTACCGTGAACAACCAG
AAGTGAGGTTCAAACACGATTTGATATTGGTCTTGCAAGGCACCTCTACA
GTTCTTGGATACAGCACCTACAATAATTTCAATACCATTTTGCGAAACAG
GCTTCGAACGTCAACTATAAAGTCGCAAGAAGTTGACGAGAACAGCGATG
GTAGATACGATTATTTGGAGTTCACTTTAGAAATGCCCATCAATGCGAAC
GAAGATGTTCGATCGGTGCAATTATTGCTATTTTTCCATTATAAATTGCA
CAAATATAGTAGCGTTGAGCTAGAGTCGTTGGCTTATTTACATTACGATT
CTGGAATATCTGGGTCTTCATTTTACACGGACGGTGACCTAttgttgaaa
caaaagaatcccTTATCTCACAAAGGAAGCTTCACTAAATTCAATaCGGG
AATCGTTGACAGGACGAACACGGACGTCAATGCTTTGAACCTTCACTCTA
TTCTCACTAACTACCAAGCACGAAACTTGACGACGGATTTCATTGGACGT
TACCCATCATGGATTTCTGGAAAATCAACCACATTCAAAATACAGACGAA
GATATATTACCCCGAACAAACTATAATCTATCAACCGGGATTTTGGCAAC
TCTTGAAACACGCTTGGATTCAATATCTGGCCatccttttcattttcatg
tttaTTTTCGGTCACGTGAAATCTTTCATTTACGAGAATCGATTAGTGGC
CACAATCATCAAGAAGAAACATCATAACGATTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006967	XLOC_006967	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00012390-protein	TCONS_00012390-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000144	supercontig	sc0000144:211797..218873 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.6415	98.5671	53.4181	43.1853	59.0735	44.5121	49.7087	52.7244	33.6194	32.6436	26.205	24.4126	14.6023	14.0735	20.784	20.8523	38.9545	37.4137	11.556	13.9988	30.8588	29.7753	54.8003	49.1515	27.7129	28.9152	27.3892	25.4297	33.3446	35.2749

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR019306	TMEM231

Blast

[Close]

BLAST of TCONS_00012390 vs. Swiss-Prot (Human)
Match: TM231 (Transmembrane protein 231 OS=Homo sapiens GN=TMEM231 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 3.071e-70
Identity = 116/295 (39.32%), Postives = 183/295 (62.03%), Query Frame = 1

Query:  145 MAMFNIYNELVTRKYHTHFWSFATIFYICVGVITYVGPLLIAYYSLGFWLKESTYREQPEVRFKHDLILV-LQGTST--VLGYSTYNNFNTILRNRLRTSTIKSQEVDENSDGRYDYLEFTLEMPINANEDVRSVQLLLFFHYKLHKYSSVELESLAYLHYDSGISGSSFYTDGDLLLKQKNPLSHKGSFTKFNTGIVDRTNTDVNALNLHSILTNYQARNLTTDFIGRYPSWISGKS--TTFKIQTKIYYPEQTIIYQPGFWQLLKHAWIQYLAILFIFMFIFGHVKSFIYENR 1014
            MA++ +++  V R Y     S A +F +    +TY+ PLL+A+ S GFWLK S+Y EQP VRF+H ++LV L G  +   L +ST+  FN +  +RLR   + ++E D N DG+ D L F LE+P+ + E V  VQL+L F Y+LH+ +++ ++S+A+L     + GS  Y +GDL L+QK PLS  G   ++N  +++ T+      +L  I+  YQ RN+TT      P W+ G++    F I   I YP + I YQPGFW+++K AW+QY++IL IF+++F  +K F+++N+
Sbjct:    1 MALYELFSHPVERSYRAGLCSKAALFLLLAAALTYIPPLLVAFRSHGFWLKRSSYEEQPTVRFQHQVLLVALLGPESDGFLAWSTFPAFNRLQGDRLRVPLVSTREEDRNQDGKTDMLHFKLELPLQSTEHVLGVQLILTFSYRLHRMATLVMQSMAFLQSSFPVPGSQLYVNGDLRLQQKQPLSCGGLDARYNISVINGTSPFAYDYDLTHIVAAYQERNVTTVLNDPNPIWLVGRAADAPFVINAIIRYPVEVISYQPGFWEMVKFAWVQYVSILLIFLWVFERIKIFVFQNQ 295

The following BLAST results are available for this feature:

BLAST of TCONS_00012390 vs. Swiss-Prot (Human)

BLAST of TCONS_00012390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM231	3.071e-70	39.32	Transmembrane protein 231 OS=Homo sapiens GN=TMEM2...	[more]

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TCONS_00012390 (transcript) - C. hemisphaerica